View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13049_low_22 (Length: 303)

Name: NF13049_low_22
Description: NF13049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13049_low_22
NF13049_low_22
[»] chr8 (42 HSPs)
chr8 (5-284)||(44101904-44102185)
chr8 (5-248)||(13514746-13514988)
chr8 (5-248)||(13604279-13604521)
chr8 (9-247)||(39323781-39324019)
chr8 (118-246)||(44103289-44103417)
chr8 (118-248)||(21670057-21670187)
chr8 (118-248)||(13513413-13513543)
chr8 (118-248)||(13602946-13603076)
chr8 (36-236)||(16362423-16362624)
chr8 (5-110)||(21671227-21671332)
chr8 (118-245)||(13363571-13363700)
chr8 (65-246)||(8397198-8397380)
chr8 (132-244)||(15116864-15116976)
chr8 (118-197)||(39325827-39325906)
chr8 (118-193)||(21961871-21961946)
chr8 (45-228)||(40251276-40251459)
chr8 (7-158)||(37274970-37275122)
chr8 (96-248)||(44607287-44607444)
chr8 (14-141)||(19914795-19914922)
chr8 (117-247)||(10053736-10053866)
chr8 (103-197)||(13360397-13360491)
chr8 (65-248)||(37978-38160)
chr8 (7-139)||(37473916-37474050)
chr8 (43-245)||(36939951-36940153)
chr8 (118-199)||(10052146-10052227)
chr8 (160-248)||(41767199-41767287)
chr8 (166-248)||(43414374-43414456)
chr8 (67-141)||(34616234-34616308)
chr8 (115-184)||(38664426-38664495)
chr8 (160-248)||(43416003-43416091)
chr8 (65-137)||(42793806-42793878)
chr8 (108-199)||(24068372-24068463)
chr8 (7-141)||(29739524-29739659)
chr8 (96-186)||(2419930-2420020)
chr8 (96-190)||(31872775-31872869)
chr8 (65-138)||(7770100-7770173)
chr8 (65-138)||(7777777-7777850)
chr8 (65-138)||(22621074-22621147)
chr8 (216-249)||(36756056-36756089)
chr8 (216-248)||(3237731-3237763)
chr8 (216-248)||(31623899-31623931)
chr8 (216-248)||(36071469-36071501)
[»] chr4 (41 HSPs)
chr4 (9-247)||(2292144-2292384)
chr4 (118-248)||(36604834-36604965)
chr4 (104-246)||(36604435-36604577)
chr4 (104-246)||(18358351-18358494)
chr4 (26-247)||(38371707-38371927)
chr4 (7-160)||(43895499-43895652)
chr4 (118-225)||(2293518-2293628)
chr4 (117-246)||(29686251-29686380)
chr4 (7-123)||(27408881-27408997)
chr4 (43-199)||(43418075-43418231)
chr4 (166-244)||(21569247-21569325)
chr4 (65-247)||(46795966-46796148)
chr4 (60-141)||(6139097-6139178)
chr4 (114-248)||(44160400-44160533)
chr4 (16-130)||(50531647-50531761)
chr4 (166-246)||(21570464-21570544)
chr4 (103-246)||(34439638-34439781)
chr4 (120-164)||(29834427-29834471)
chr4 (118-246)||(47668590-47668718)
chr4 (96-199)||(96652-96755)
chr4 (120-199)||(526714-526793)
chr4 (132-199)||(2310789-2310856)
chr4 (120-199)||(29833414-29833493)
chr4 (166-248)||(31205750-31205832)
chr4 (7-141)||(31711192-31711326)
chr4 (120-176)||(30672060-30672115)
chr4 (116-248)||(33377355-33377487)
chr4 (160-248)||(47606635-47606723)
chr4 (65-136)||(3528295-3528366)
chr4 (65-248)||(21104250-21104433)
chr4 (65-176)||(47667243-47667354)
chr4 (132-199)||(52880856-52880923)
chr4 (96-179)||(52981121-52981204)
chr4 (187-248)||(53757302-53757364)
chr4 (65-138)||(41348342-41348415)
chr4 (65-138)||(56001209-56001281)
chr4 (216-248)||(6616302-6616334)
chr4 (33-141)||(7989344-7989452)
chr4 (75-139)||(28655675-28655739)
chr4 (216-248)||(31711085-31711117)
chr4 (117-245)||(53150398-53150526)
[»] chr1 (36 HSPs)
chr1 (9-243)||(51217616-51217855)
chr1 (32-246)||(34654247-34654464)
chr1 (118-247)||(51218959-51219088)
chr1 (118-246)||(27689277-27689406)
chr1 (118-248)||(30551582-30551712)
chr1 (118-246)||(37624563-37624691)
chr1 (118-247)||(22766813-22766943)
chr1 (118-247)||(23082119-23082248)
chr1 (118-247)||(9415618-9415747)
chr1 (7-127)||(26055011-26055131)
chr1 (120-176)||(25889487-25889543)
chr1 (118-246)||(44977216-44977344)
chr1 (124-199)||(35683097-35683172)
chr1 (120-199)||(48935105-48935184)
chr1 (133-247)||(46127783-46127897)
chr1 (14-244)||(13929292-13929524)
chr1 (120-199)||(2237973-2238052)
chr1 (120-199)||(34531705-34531784)
chr1 (120-199)||(35684198-35684276)
chr1 (96-170)||(9417068-9417142)
chr1 (103-193)||(27690607-27690697)
chr1 (120-197)||(48973242-48973319)
chr1 (124-199)||(2236855-2236930)
chr1 (160-231)||(6709678-6709749)
chr1 (65-138)||(40110592-40110665)
chr1 (118-151)||(50678453-50678486)
chr1 (75-138)||(33941420-33941483)
chr1 (136-199)||(34532713-34532776)
chr1 (103-197)||(37623294-37623388)
chr1 (132-197)||(1061459-1061524)
chr1 (117-186)||(22169210-22169279)
chr1 (216-248)||(3978037-3978069)
chr1 (77-141)||(9210073-9210137)
chr1 (216-248)||(25785961-25785993)
chr1 (96-140)||(28999940-28999984)
chr1 (65-137)||(40533541-40533613)
[»] chr2 (35 HSPs)
chr2 (5-228)||(4513633-4513856)
chr2 (7-248)||(14716075-14716325)
chr2 (32-224)||(26205954-26206145)
chr2 (118-244)||(14714489-14714615)
chr2 (118-247)||(4512101-4512229)
chr2 (118-246)||(41296447-41296575)
chr2 (32-201)||(4830582-4830751)
chr2 (144-243)||(37982689-37982788)
chr2 (118-196)||(26205058-26205136)
chr2 (96-228)||(36422692-36422825)
chr2 (85-246)||(8538584-8538746)
chr2 (14-199)||(6706968-6707152)
chr2 (120-196)||(2305585-2305661)
chr2 (57-176)||(15850177-15850296)
chr2 (120-176)||(41312565-41312621)
chr2 (120-199)||(2306656-2306735)
chr2 (120-199)||(3665266-3665345)
chr2 (120-199)||(33836811-33836890)
chr2 (7-141)||(37867856-37867991)
chr2 (26-247)||(28108831-28109052)
chr2 (103-197)||(41295149-41295243)
chr2 (132-199)||(3255885-3255952)
chr2 (7-141)||(10368266-10368401)
chr2 (75-141)||(40174715-40174780)
chr2 (118-191)||(8537062-8537135)
chr2 (132-199)||(4630091-4630158)
chr2 (14-141)||(7038229-7038356)
chr2 (7-130)||(11386735-11386858)
chr2 (118-228)||(15850652-15850762)
chr2 (65-127)||(19397647-19397709)
chr2 (75-141)||(23178832-23178898)
chr2 (75-141)||(23590089-23590155)
chr2 (146-228)||(42366882-42366966)
chr2 (216-248)||(7038423-7038455)
chr2 (216-244)||(41796043-41796071)
[»] scaffold0046 (1 HSPs)
scaffold0046 (7-247)||(24697-24937)
[»] chr7 (37 HSPs)
chr7 (5-246)||(43111424-43111669)
chr7 (5-246)||(24493980-24494214)
chr7 (118-246)||(24495044-24495173)
chr7 (118-248)||(44113422-44113552)
chr7 (118-248)||(49162230-49162360)
chr7 (7-246)||(25153653-25153892)
chr7 (67-248)||(26407344-26407525)
chr7 (14-199)||(35483616-35483803)
chr7 (120-199)||(36673831-36673910)
chr7 (14-130)||(10257277-10257393)
chr7 (7-139)||(13446540-13446672)
chr7 (96-248)||(44114627-44114778)
chr7 (120-199)||(2904042-2904121)
chr7 (120-199)||(30223971-30224050)
chr7 (96-247)||(18670475-18670625)
chr7 (124-199)||(41126281-41126356)
chr7 (9-127)||(25532258-25532376)
chr7 (101-199)||(38408250-38408348)
chr7 (120-176)||(30222711-30222767)
chr7 (161-228)||(8661696-8661763)
chr7 (166-248)||(43704493-43704575)
chr7 (93-199)||(14107874-14107980)
chr7 (93-199)||(14417831-14417937)
chr7 (166-247)||(36584946-36585027)
chr7 (71-159)||(28326336-28326424)
chr7 (7-199)||(14206715-14206908)
chr7 (7-199)||(14215405-14215598)
chr7 (132-199)||(34558308-34558375)
chr7 (120-199)||(41618494-41618573)
chr7 (186-244)||(47536911-47536969)
chr7 (216-246)||(40926610-40926640)
chr7 (160-247)||(43703045-43703134)
chr7 (216-248)||(4973506-4973538)
chr7 (166-246)||(16955687-16955767)
chr7 (172-228)||(35044632-35044688)
chr7 (216-248)||(36703042-36703074)
chr7 (216-248)||(43006378-43006410)
[»] chr3 (45 HSPs)
chr3 (32-248)||(26797312-26797528)
chr3 (104-248)||(7483103-7483246)
chr3 (118-247)||(7483518-7483649)
chr3 (42-246)||(17345306-17345509)
chr3 (118-248)||(31638109-31638241)
chr3 (118-248)||(34902987-34903116)
chr3 (65-248)||(53809433-53809616)
chr3 (118-199)||(39133059-39133140)
chr3 (118-246)||(17350095-17350223)
chr3 (77-176)||(7921595-7921694)
chr3 (7-141)||(11220540-11220674)
chr3 (118-246)||(25583109-25583237)
chr3 (120-199)||(32973181-32973260)
chr3 (120-199)||(53049032-53049111)
chr3 (14-199)||(25585722-25585907)
chr3 (1-199)||(32980326-32980526)
chr3 (117-228)||(27234688-27234800)
chr3 (146-246)||(33149477-33149577)
chr3 (124-199)||(32974222-32974297)
chr3 (34-141)||(35173247-35173354)
chr3 (124-199)||(48035323-48035398)
chr3 (120-199)||(52293518-52293597)
chr3 (124-199)||(53047939-53048014)
chr3 (160-245)||(21247232-21247317)
chr3 (96-248)||(19622890-19623042)
chr3 (124-199)||(1301074-1301149)
chr3 (120-199)||(39287512-39287591)
chr3 (137-247)||(786454-786564)
chr3 (133-199)||(5416240-5416306)
chr3 (166-247)||(50003264-50003345)
chr3 (207-248)||(5411320-5411361)
chr3 (134-199)||(7583512-7583577)
chr3 (67-227)||(43345333-43345493)
chr3 (32-136)||(45422072-45422176)
chr3 (75-141)||(8372566-8372632)
chr3 (22-141)||(19252897-19253018)
chr3 (101-199)||(38639060-38639158)
chr3 (120-194)||(48825859-48825933)
chr3 (133-199)||(55443558-55443624)
chr3 (207-248)||(5409330-5409371)
chr3 (207-248)||(27226621-27226662)
chr3 (134-199)||(40501850-40501915)
chr3 (132-176)||(11481966-11482010)
chr3 (65-248)||(48252926-48253109)
chr3 (216-248)||(48338208-48338240)
[»] scaffold0084 (2 HSPs)
scaffold0084 (7-248)||(11699-11940)
scaffold0084 (132-199)||(13211-13278)
[»] chr6 (19 HSPs)
chr6 (5-199)||(18773696-18773891)
chr6 (77-229)||(13279369-13279520)
chr6 (120-199)||(2138632-2138711)
chr6 (120-199)||(19368513-19368592)
chr6 (132-199)||(8447263-8447330)
chr6 (132-199)||(8456067-8456134)
chr6 (160-243)||(24547100-24547183)
chr6 (7-141)||(31740153-31740288)
chr6 (14-141)||(34083159-34083285)
chr6 (166-228)||(10673622-10673684)
chr6 (134-197)||(13176342-13176405)
chr6 (166-248)||(4030140-4030222)
chr6 (207-241)||(24317050-24317084)
chr6 (166-247)||(13562337-13562418)
chr6 (134-199)||(26584046-26584111)
chr6 (146-227)||(28931135-28931216)
chr6 (160-248)||(4030898-4030985)
chr6 (216-248)||(15435685-15435717)
chr6 (207-247)||(24318146-24318186)
[»] chr5 (38 HSPs)
chr5 (118-246)||(14210138-14210266)
chr5 (101-248)||(12861542-12861689)
chr5 (13-141)||(32735367-32735495)
chr5 (101-248)||(12829563-12829710)
chr5 (96-247)||(41905169-41905320)
chr5 (118-248)||(41906391-41906522)
chr5 (120-196)||(15510258-15510334)
chr5 (5-141)||(19524082-19524218)
chr5 (77-196)||(5384298-5384417)
chr5 (120-199)||(20988732-20988811)
chr5 (118-199)||(21387679-21387760)
chr5 (120-196)||(4566996-4567072)
chr5 (71-243)||(5975754-5975926)
chr5 (75-191)||(14212141-14212256)
chr5 (124-199)||(15509237-15509312)
chr5 (166-247)||(42962017-42962098)
chr5 (14-247)||(12935991-12936224)
chr5 (178-249)||(14212266-14212337)
chr5 (132-199)||(22650635-22650702)
chr5 (75-141)||(1273189-1273255)
chr5 (134-248)||(19825867-19825981)
chr5 (166-248)||(39050681-39050763)
chr5 (118-199)||(18693740-18693821)
chr5 (166-247)||(42963256-42963337)
chr5 (216-247)||(1663181-1663212)
chr5 (124-199)||(4567973-4568048)
chr5 (71-138)||(8188146-8188213)
chr5 (216-247)||(12950351-12950382)
chr5 (132-195)||(20991656-20991719)
chr5 (193-244)||(24805350-24805401)
chr5 (67-141)||(15857560-15857634)
chr5 (96-138)||(21389114-21389156)
chr5 (207-248)||(3953919-3953960)
chr5 (216-248)||(5382935-5382967)
chr5 (216-248)||(6629724-6629756)
chr5 (71-139)||(9170835-9170903)
chr5 (8-60)||(14210396-14210448)
chr5 (216-248)||(30916209-30916241)
[»] scaffold0024 (1 HSPs)
scaffold0024 (117-248)||(72978-73109)
[»] scaffold0013 (1 HSPs)
scaffold0013 (7-123)||(96278-96394)
[»] scaffold0015 (1 HSPs)
scaffold0015 (118-193)||(207791-207866)
[»] scaffold0177 (1 HSPs)
scaffold0177 (120-199)||(1797-1876)
[»] scaffold0012 (1 HSPs)
scaffold0012 (160-231)||(243623-243694)
[»] scaffold0290 (2 HSPs)
scaffold0290 (7-137)||(8483-8614)
scaffold0290 (216-248)||(9569-9601)
[»] scaffold0155 (1 HSPs)
scaffold0155 (132-199)||(5211-5278)
[»] scaffold0002 (1 HSPs)
scaffold0002 (120-199)||(458455-458534)
[»] scaffold0051 (2 HSPs)
scaffold0051 (7-141)||(22227-22360)
scaffold0051 (118-148)||(39894-39924)
[»] scaffold0098 (1 HSPs)
scaffold0098 (57-141)||(42278-42362)
[»] scaffold0041 (1 HSPs)
scaffold0041 (207-248)||(1206-1247)
[»] scaffold1974 (1 HSPs)
scaffold1974 (216-248)||(719-751)
[»] scaffold1878 (1 HSPs)
scaffold1878 (216-248)||(523-555)


Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 5 - 284
Target Start/End: Complemental strand, 44102185 - 44101904
Alignment:
Q  5 gatggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44102185 gatggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaa 44102086  T
Q  105 atattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacg-ttttttagttaggggaccattct 203  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||    
T  44102085 atattagtcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgagacgtttttttagttaggacaccattct 44101986  T
Q  204 aagaaaaagaattaagttaagggactaaatgatgtattaagcctac-nnnnnnnctcacttcatagagaaatttacctttgg 284  Q
     | |||||||||||||||||||||||||||||| ||||||||||||        ||||||||||||||||||||||||||||    
T  44101985 gaaaaaaagaattaagttaagggactaaatgatatattaagcctacttttttttctcacttcatagagaaatttacctttgg 44101904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 5 - 248
Target Start/End: Original strand, 13514746 - 13514988
Alignment:
Q  5 gatggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaa 104  Q
    |||||||| ||||||||||||||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||| ||||||| | ||||||| ||||    
T  13514746 gatggaaggaagaagatgaagaaagggaaaaa-ttagctgttggtggctcattgttgtatacaatagacatgcaatcgaatggtttaaattatatcaaaa 13514844  T
Q  105 atattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattcta 204  Q
    | ||||| ||||||||||||||| |||| |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||     
T  13514845 acattagtcattaaaaaactaacggagatgaccaaaagaggtaacagaagaagacataagggaccaatttgagacgttttttagttaggggaccatactg 13514944  T
Q  205 agaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  13514945 agaaaaagaattaagttaagggaccaaaggatgtattaagccta 13514988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 5 - 248
Target Start/End: Original strand, 13604279 - 13604521
Alignment:
Q  5 gatggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaa 104  Q
    |||||||| ||||||||||||||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||| ||||||| | ||||||| ||||    
T  13604279 gatggaaggaagaagatgaagaaagggaaaaa-ttagctgttggtggctcattgttgtatacaatagacatgcaatcgaatggtttaaattatatcaaaa 13604377  T
Q  105 atattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattcta 204  Q
    | ||||| ||||||||||||||| |||| |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||     
T  13604378 acattagtcattaaaaaactaacggagatgaccaaaagaggtaacagaagaagacataagggaccaatttgagacgttttttagttaggggaccatactg 13604477  T
Q  205 agaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  13604478 agaaaaagaattaagttaagggaccaaaggatgtattaagccta 13604521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 9 - 247
Target Start/End: Complemental strand, 39324019 - 39323781
Alignment:
Q  9 gaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatat 108  Q
    |||| ||||||||||||||||| |||||| | ||||||||||  ||||||||||| ||||||||||||||||| ||||||| | ||||||| ||||||||    
T  39324019 gaaggaagaagatgaagaaaggaaaaaaaattagtgttggtgtttcattgttgtatacaatagacatgcaatctaatggttaaaattatatcaaaaatat 39323920  T
Q  109 taggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaa 208  Q
    |||   || |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||| |   | ||||    
T  39323919 tagatcttgaaaaactaacggagaggaccaaaagaggtaacggaagaagacataagagatcaatttgagacgttttttagttaggagactaaaatgagaa 39323820  T
Q  209 aaagaattaagttaagggactaaatgatgtattaagcct 247  Q
     |  || |||||||||||| |||||||| ||||||||||    
T  39323819 tagaaaataagttaagggattaaatgatatattaagcct 39323781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 44103289 - 44103417
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  44103289 aaaaactaacggagaggaccaaaagaggaaacggaagaagacataagagaccaatttgagacgttttttagttaggggatcattctaaaaaaaagaatta 44103388  T
Q  218 agttaagggactaaatgatgtattaagcc 246  Q
    ||||||||||||||| |||||||| ||||    
T  44103389 agttaagggactaaacgatgtattgagcc 44103417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 21670187 - 21670057
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| || |||||||||||||    
T  21670187 aaaaactaacggagaagaccaaaagaggtaacggaagaagacataagggaccaatttgagacgttttttagttaggggaccatactgagaaaaagaatta 21670088  T
Q  218 agttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||| ||  |||||||||||||||    
T  21670087 agttaagggaccaacggatgtattaagccta 21670057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 13513543 - 13513413
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||  | |||||||||||||    
T  13513543 aaaagctaacggagaggaccaaaagaggtaacagaagaagacataagggaccaatttgagacgttttttagttaggggaccatattgagaaaaagaatta 13513444  T
Q  218 agttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||| ||| |||||||||||||||    
T  13513443 agttaagggaccaaaggatgtattaagccta 13513413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 13603076 - 13602946
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||  | |||||||||||||    
T  13603076 aaaagctaacggagaggaccaaaagaggtaacagaagaagacataagggaccaatttgagacgttttttagttaggggaccatattgagaaaaagaatta 13602977  T
Q  218 agttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||| ||| |||||||||||||||    
T  13602976 agttaagggaccaaaggatgtattaagccta 13602946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 36 - 236
Target Start/End: Complemental strand, 16362624 - 16362423
Alignment:
Q  36 aattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagagga 135  Q
    ||||| |||||| ||||||| |||| || |||||  || ||||||| || |||||| || |||| ||||||||||| ||||||||||||||| |||||||    
T  16362624 aattaggtgttgttggctcactgttatatacaatgtacctgcaatcgaacggttgaaatcatatcaaaaatattagacattaaaaaactaacggagagga 16362525  T
Q  136 ccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattct-aagaaaaagaattaagttaagggactaaatg 234  Q
    |||||||| |||||||  ||||| |||||||||||| |||||||||||| |||||| || |||||| | || |||||||||||||||||||||| |||||    
T  16362524 ccaaaagatgtaacggtggaagatataagagaccaaattgaaacgttttatagttaaggtaccattttgaaaaaaaagaattaagttaagggaccaaatg 16362425  T
Q  235 at 236  Q
    ||    
T  16362424 at 16362423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 21671227 - 21671332
Alignment:
Q  5 gatggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaa 104  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  21671227 gatggaagaaagaagatgaagaaagggaaaaaattaggtgttggtggctcattgttgtacacaatagacatgcaatcaaatggttgaaattatatcaaaa 21671326  T
Q  105 atatta 110  Q
    ||||||    
T  21671327 atatta 21671332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 118 - 245
Target Start/End: Original strand, 13363571 - 13363700
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacg--ttttttagttaggggaccattctaagaaaaagaat 215  Q
    |||||||||| |||||||||||||||||||||   |||| ||||||| |||||| ||||||||  ||||||||||| ||||||||| ||| ||||| |||    
T  13363571 aaaaactaacggagaggaccaaaagaggtaaccacagaaaacataagggaccaaattgaaacgttttttttagttaagggaccattttaaaaaaaataat 13363670  T
Q  216 taagttaagggactaaatgatgtattaagc 245  Q
    ||| |||| |||||||||||| ||||||||    
T  13363671 taaattaaaggactaaatgatatattaagc 13363700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 65 - 246
Target Start/End: Original strand, 8397198 - 8397380
Alignment:
Q  65 acaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataag 164  Q
    ||||| ||| ||||||| ||||||||| ||||||| ||||||||||  ||||| ||||||||| |||| |||||| | || ||| || | || ||||||     
T  8397198 acaatggacctgcaatcaaatggttgaaattatatcaaaaatattaatcattataaaactaacggagatgaccaagatagataatggcataatacataat 8397297  T
Q  165 agaccaatttgaaacgtttt-ttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaagcc 246  Q
     ||| ||||||| ||||||| ||||||||| ||| ||| | | |||||||| |||||||||| |||| |||||||||||||||    
T  8397298 ggactaatttgagacgtttttttagttaggtgactattgtgaaaaaaagaaataagttaaggcactatatgatgtattaagcc 8397380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 244
Target Start/End: Original strand, 15116864 - 15116976
Alignment:
Q  132 aggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacg-ttttttagttaggggaccattctaagaaaaagaattaagttaagggacta 230  Q
    ||||||||||||||||||||||||| || |||||||| ||||||| ||| ||||||||||| |||||||| |||| ||||||||| |||||||   ||||    
T  15116864 aggaccaaaagaggtaacggaagaaaacgtaagagactaatttgagacgtttttttagtta-gggaccatactaaaaaaaagaataaagttaaataacta 15116962  T
Q  231 aatgatgtattaag 244  Q
    ||||||||||||||    
T  15116963 aatgatgtattaag 15116976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 39325827 - 39325906
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggac 197  Q
    |||||||| |||||| ||| ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||    
T  39325827 aaaaactagcagagatgactaaaagaggtaacggaagaaaacataagggaccaatttaaaacgttttttagttaggggac 39325906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 118 - 193
Target Start/End: Complemental strand, 21961946 - 21961871
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttagg 193  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||| || |||||||| |||||||||| |||||    
T  21961946 aaaaactaacggagaggaccaaaagagataacggaagaagacataagggatcaatttgagacgttttttaattagg 21961871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 228
Target Start/End: Original strand, 40251276 - 40251459
Alignment:
Q  45 ttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagag 144  Q
    ||||||| ||| ||||||||||||||||| ||||||  ||||||||| || |||| ||||||||||| |||||||||| |||  ||||||||||||| |     
T  40251276 ttggtggttcagtgttgtacacaatagacctgcaattgaatggttgaaatcatatcaaaaatattagacattaaaaaattaattgagaggaccaaaatac 40251375  T
Q  145 gtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggac 228  Q
    |||||   | || ||||||| ||  | ||||| |||||||||| |||  ||| |||| | | ||||| |||||| |||||||||    
T  40251376 gtaacaatataatacataagggatgagtttgagacgttttttacttataggatcattatgaaaaaaataattaaattaagggac 40251459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 37275122 - 37274970
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaaaaaa-ttaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaa 105  Q
    |||||| ||||||||||||| |||||||||| ||| ||| || ||| ||| ||||||| | | | ||||||||||| ||||||||| || |||| | |||    
T  37275122 tggaaggaagaagatgaagagagggaaaaaaattatgtggtgatggttcactgttgtatatattggacatgcaatcgaatggttgaaatcatatcagaaa 37275023  T
Q  106 tattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaaga 158  Q
    | |||  ||||||||||||||| ||||||||||||| ||  ||||| ||||||    
T  37275022 tgttatacattaaaaaactaacggagaggaccaaaatagtaaacggcagaaga 37274970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 248
Target Start/End: Original strand, 44607287 - 44607444
Alignment:
Q  96 atataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaa-----cgttttttagtt 190  Q
    |||| ||||||||||| ||||||||||||||| ||||||||||||| || ||||||   || ||||||||||||||||| |||      ||||| |||||    
T  44607287 atattaaaaatattagacattaaaaaactaactgagaggaccaaaatagataacggcgtaatacataagagaccaatttaaaatgttttgttttatagtt 44607386  T
Q  191 aggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    |  ||||| || | | | |||||||||| ||||||||||| ||||| |||||| ||||    
T  44607387 aaaggacctttatgaaataaagaattaaattaagggactatatgatatattaaaccta 44607444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 19914795 - 19914922
Alignment:
Q  14 aagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggc 113  Q
    |||||||||||||||| |||||||||| |||||||||| ||||||| ||| | ||| ||| ||||||| ||||||    || |||| ||||||||||| |    
T  19914795 aagaagatgaagaaagagaaaaaattaggtgttggtggttcattgtagtatataatggacctgcaatcaaatggtcacaataatatcaaaaatattagac 19914894  T
Q  114 attaaaaaactaacagagaggaccaaaa 141  Q
    ||||| |||| ||| || | ||||||||    
T  19914895 attaataaacaaacggatatgaccaaaa 19914922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 10053736 - 10053866
Alignment:
Q  117 aaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatt 216  Q
    |||||| |||| ||||| ||||||||||||||||  | |||||||||| |||||| |||| ||  ||| |||||| |||||||   | | ||  | || |    
T  10053736 aaaaaattaacggagagaaccaaaagaggtaacgacataagacataagggaccaacttgagacactttatagttaagggaccaaagtgaaaaccaaaaat 10053835  T
Q  217 aagttaagggactaaatgatgtattaagcct 247  Q
    |||||||||||||||||||||||||||||||    
T  10053836 aagttaagggactaaatgatgtattaagcct 10053866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 13360491 - 13360397
Alignment:
Q  103 aaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggac 197  Q
    |||||||| | || ||| ||||||| | ||||||||||| || |||||| |||| ||||||| ||||||||||| |||||||||| |||||||||    
T  13360491 aaatattaagaatcaaacaactaactgtgaggaccaaaatagataacggtagaatacataagggaccaatttgagacgttttttaattaggggac 13360397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 248
Target Start/End: Complemental strand, 38160 - 37978
Alignment:
Q  65 acaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataag 164  Q
    ||||| ||||||||||  ||||||| | || |||| |||||  |||| ||||||||| ||||| |||||||||| || ||  |||||| |||||| || |    
T  38160 acaatggacatgcaattaaatggttaaaatcatatcaaaaaatttagacattaaaaa-ctaacggagaggaccacaatagtaaacggaggaagacttatg 38062  T
Q  165 agaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    ||||||| || ||||  ||| |||||||||||| |   | | || || || ||||||||||||| ||| |||||||||||||||    
T  38061 agaccaaattcaaacactttatagttaggggactaaaattaaaacaaaaaataagttaagggaccaaacgatgtattaagccta 37978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 37473916 - 37474050
Alignment:
Q  7 tggaagaaagaagatgaagaaaggg--aaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaa 104  Q
    |||||| ||||||||||||||||||  ||||||||| |||||||||| ||| ||| ||| ||||| ||  ||||||| ||||||  | |  |||| ||||    
T  37473916 tggaaggaagaagatgaagaaagggaaaaaaaattaggtgttggtggttcaatgtggtatacaatggatctgcaatcgaatggtcaaaacaatatcaaaa 37474015  T
Q  105 atattaggcattaaaaaactaacagagaggaccaa 139  Q
    ||||||| ||||||||||  ||| || ||||||||    
T  37474016 atattagacattaaaaaataaacggacaggaccaa 37474050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 245
Target Start/End: Original strand, 36939951 - 36940153
Alignment:
Q  43 tgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaag 142  Q
    ||||||||| ||| | || || ||||| ||| ||||||| ||||||||| |  |||| |||| ||||||  ||||||||| |||| |||| ||||||||     
T  36939951 tgttggtggttcactattatatacaatggacctgcaatcgaatggttgaaaccatatcaaaattattagatattaaaaaattaacggagatgaccaaaat 36940050  T
Q  143 aggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtatta 242  Q
    ||  ||||| ||||||  || || ||||| |||||||  ||| ||||||||||| ||   | | ||  | || ||||||||||||| |||||||||||||    
T  36940051 agtaaacggcagaagatttatgataccaaattgaaacactttatagttaggggatcaaagtgaaaaccaaaaataagttaagggaccaaatgatgtatta 36940150  T
Q  243 agc 245  Q
    |||    
T  36940151 agc 36940153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 199
Target Start/End: Complemental strand, 10052227 - 10052146
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||||  |||| |||||||||||||||||| ||| |||||||| ||||||||||| ||  ||| || |||||||||||    
T  10052227 aaaaactaaaggagatgaccaaaagaggtaacggcagatgacataagggaccaatttgagacactttataattaggggacca 10052146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 248
Target Start/End: Original strand, 41767199 - 41767287
Alignment:
Q  160 ataagagaccaatttgaaacgttttttagttaggggacca-ttctaagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    ||||| ||||| ||||||||||||  |||||||||||||| ||| || | |||||||||||||||||||| |||||||  ||||||||||    
T  41767199 ataagggaccattttgaaacgtttaatagttaggggaccaattcgaa-ataaagaattaagttaagggaccaaatgatcaattaagccta 41767287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 43414456 - 43414374
Alignment:
Q  166 gaccaatttgaaacgttttttagttaggggacca-ttctaagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    ||||| ||||||||||||  |||||||||||||| ||| || ||||||||| |||||||||||| |||||||  ||||||||||    
T  43414456 gaccattttgaaacgtttaatagttaggggaccaattcgaa-aaaaagaataaagttaagggaccaaatgatcaattaagccta 43414374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 34616308 - 34616234
Alignment:
Q  67 aatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaa 141  Q
    ||||||| ||||||| ||||||||| || |||| ||||||||||  ||||||||||||||| || | ||||||||    
T  34616308 aatagacctgcaatcgaatggttgaaatcatattaaaaatattaaacattaaaaaactaacggaaatgaccaaaa 34616234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 38664495 - 38664426
Alignment:
Q  115 ttaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgtttt 184  Q
    ||||||||||||| || | || ||||||||||||||| | |||||||||| || |||||||| |||||||    
T  38664495 ttaaaaaactaacggatatgaacaaaagaggtaacggtaaaagacataagggaacaatttgagacgtttt 38664426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 248
Target Start/End: Original strand, 43416003 - 43416091
Alignment:
Q  160 ataagagaccaatttgaaacgttttttagttaggggacca-ttctaagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    |||| |||||| ||||||||||||  |||||| ||||||| ||| || |||||||||||||||||||||| || ||||  ||||||||||    
T  43416003 ataaaagaccattttgaaacgtttaatagttaagggaccaattcgaa-aaaaagaattaagttaagggaccaattgatcaattaagccta 43416091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 42793878 - 42793806
Alignment:
Q  65 acaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggacc 137  Q
    ||||| ||||||||||||||||||| | || |||| |||| | |||| |||||||||| |||||||| |||||    
T  42793878 acaatggacatgcaatccaatggttaaaatcatatcaaaagttttagacattaaaaaattaacagaggggacc 42793806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 24068463 - 24068372
Alignment:
Q  108 ttaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||| ||||||||||||||| ||||||||||||  ||  |||||| |||||| || | |||||| |||| ||  ||| ||||||||||||||    
T  24068463 ttagacattaaaaaactaacggagaggaccaaattagtaaacggaggaagacttatgggaccaaattgagacactttatagttaggggacca 24068372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 29739524 - 29739659
Alignment:
Q  7 tggaagaaagaagatgaagaaagg-gaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaa 105  Q
    |||||| |||||||||||||||||  ||||||||| |||||||||| ||| ||| ||| | ||| ||| | ||||| || ||| || |  |||| |||||    
T  29739524 tggaaggaagaagatgaagaaaggaaaaaaaattaggtgttggtggttcagtgtggtatataatggacctacaatcgaacggtcgaaaacatatcaaaaa 29739623  T
Q  106 tattaggcattaaaaaactaacagagaggaccaaaa 141  Q
    |||||  ||||||||||| ||| || | ||||||||    
T  29739624 tattaaacattaaaaaacaaacggacatgaccaaaa 29739659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 2420020 - 2419930
Alignment:
Q  96 atataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgtttttt 186  Q
    |||| |||||||| |  ||| ||||||||||| | || |||||||| || |||||| |||| | ||||| ||||||||||| |||||||||    
T  2420020 atattaaaaatatcaaacataaaaaaactaactgtgaagaccaaaatagataacggcagaatatataagggaccaatttgagacgtttttt 2419930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 190
Target Start/End: Original strand, 31872775 - 31872869
Alignment:
Q  96 atataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagtt 190  Q
    |||| |||||||| |  ||| ||||||||||| | || |||||||| || |||||| |||| ||||||  ||||||||||| || ||||||||||    
T  31872775 atattaaaaatatcaaacataaaaaaactaactgcgaagaccaaaatagataacggtagaatacataacggaccaatttgagacattttttagtt 31872869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 138
Target Start/End: Complemental strand, 7770173 - 7770100
Alignment:
Q  65 acaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggacca 138  Q
    ||||| ||||| ||||| ||||||| | || | ||||||||  |||| ||||||||||||||| ||||||||||    
T  7770173 acaatggacatacaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacggagaggacca 7770100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 138
Target Start/End: Complemental strand, 7777850 - 7777777
Alignment:
Q  65 acaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggacca 138  Q
    ||||| ||||| ||||| ||||||| | || | ||||||||  |||| ||||||||||||||| ||||||||||    
T  7777850 acaatggacatacaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacggagaggacca 7777777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 138
Target Start/End: Original strand, 22621074 - 22621147
Alignment:
Q  65 acaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggacca 138  Q
    ||||| ||||||||||| |||| || | || |||| || ||| |||  ||||||||||||||||||||||||||    
T  22621074 acaatggacatgcaatcaaatgattaaaatcatatcaagaattttatacattaaaaaactaacagagaggacca 22621147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 249
Target Start/End: Complemental strand, 36756089 - 36756056
Alignment:
Q  216 taagttaagggactaaatgatgtattaagcctac 249  Q
    ||||||||||||| ||||||||||||||||||||    
T  36756089 taagttaagggaccaaatgatgtattaagcctac 36756056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 3237731 - 3237763
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| |||||||||||||||||||    
T  3237731 taagttaagggaccaaatgatgtattaagccta 3237763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 31623931 - 31623899
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| |||||||||||||||||||    
T  31623931 taagttaagggaccaaatgatgtattaagccta 31623899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 36071469 - 36071501
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||| |||||||||||||||||||||||    
T  36071469 taagttaagagactaaatgatgtattaagccta 36071501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 178; Significance: 5e-96; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 9 - 247
Target Start/End: Complemental strand, 2292384 - 2292144
Alignment:
Q  9 gaagaaagaagatgaagaaagggaaaaaa--ttaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaat 106  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||||  |||||||| ||||||| ||||||    
T  2292384 gaagaaagaagatgaagaaagggaaaaaaaattaagtgttggtggctcattgttgtacgtaatagacatgcaatctgatggttgaaattatatcaaaaat 2292285  T
Q  107 attaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaag 206  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||| ||||    
T  2292284 attagtcattaaaaaactaacagagaggaccaagagaggtaacggaagaagacataagggaccaatttgaggcgttttttagttaggggaccattataag 2292185  T
Q  207 aaaaagaattaagttaagggactaaatgatgtattaagcct 247  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  2292184 aaaaagaattaagttaagggactaaacgatgtattaagcct 2292144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 118 - 248
Target Start/End: Original strand, 36604834 - 36604965
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattct-aagaaaaagaatt 216  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||| || | |||||||||||    
T  36604834 aaaaactaacggagaggaccaaaagaggtaacggaagaagacataagggaccaatttaagacgttttttagttaggggaccatactgaggaaaaagaatt 36604933  T
Q  217 aagttaagggactaaatgatgtattaagccta 248  Q
    |||||||||||| ||  |||||||||||||||    
T  36604934 aagttaagggaccaacggatgtattaagccta 36604965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 104 - 246
Target Start/End: Complemental strand, 36604577 - 36604435
Alignment:
Q  104 aatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattct 203  Q
    |||||||| || |||||||||||| |||| || ||||||||||||||  | |||||||||| ||||||||| | ||||||||||||||||||||||| ||    
T  36604577 aatattagtcaataaaaaactaacggagatgatcaaaagaggtaacgacaaaagacataagggaccaatttaagacgttttttagttaggggaccatact 36604478  T
Q  204 aagaaaaagaattaagttaagggactaaatgatgtattaagcc 246  Q
     |||||||||||||||||||||||| ||  ||||| |||||||    
T  36604477 gagaaaaagaattaagttaagggaccaacggatgtgttaagcc 36604435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 246
Target Start/End: Original strand, 18358351 - 18358494
Alignment:
Q  104 aatattaggcattaaaaaactaa-cagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattc 202  Q
    |||||||| || ||||||||||| | |||| || ||||||||||||||  | |||||||||| ||||||||| | ||||||||||||||||||||||| |    
T  18358351 aatattagtcaataaaaaactaaacggagatgatcaaaagaggtaacgacaaaagacataagggaccaatttaagacgttttttagttaggggaccatac 18358450  T
Q  203 taagaaaaagaattaagttaagggactaaatgatgtattaagcc 246  Q
    | |||||||||||||||||||||||| ||  ||||| |||||||    
T  18358451 tgagaaaaagaattaagttaagggaccaacggatgtgttaagcc 18358494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 26 - 247
Target Start/End: Original strand, 38371707 - 38371927
Alignment:
Q  26 aaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaacta 125  Q
    ||||||||||||| |  ||||||||||||| | || || ||||||||| ||||||| ||||||| | ||| ||| |||| |||||| ||| |||||||||    
T  38371707 aaagggaaaaaataagatgttggtggctcactattata-acaatagacctgcaatcgaatggtttaaattgtatcaaaattattagacatcaaaaaacta 38371805  T
Q  126 acagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagg 225  Q
     ||||||  || |||| ||||||||  | |||||||||| || |||||||| ||||||||||||||||||| ||  || | || |  || |||||||||     
T  38371806 tcagagataactaaaataggtaacgacaaaagacataagggatcaatttgagacgttttttagttaggggatcaaactgaaaacagaaaataagttaaga 38371905  T
Q  226 gactaaatgatgtattaagcct 247  Q
    |||  |||||||||||||||||    
T  38371906 gaccgaatgatgtattaagcct 38371927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 43895499 - 43895652
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaat 106  Q
    |||||| ||||||||| |||||||| |||||||  |||||| ||| ||||||||||| ||||||| ||||||||  ||||||| | |||| || ||||||    
T  43895499 tggaaggaagaagatggagaaagggtaaaaatttggtgttgatggttcattgttgtatacaatagtcatgcaattgaatggttaaaattacatcaaaaat 43895598  T
Q  107 attaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagaca 160  Q
    ||||| |||||||||| |||| |||| |||||||| || |||||  ||||||||    
T  43895599 attagacattaaaaaattaacggagatgaccaaaatagataacgagagaagaca 43895652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 118 - 225
Target Start/End: Original strand, 2293518 - 2293628
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaa---gaa 214  Q
    |||||||||| ||||||||||| |||| | ||||||||||||||||| ||||||||| | ||||||||||||||||||||||||  || |||||   |||    
T  2293518 aaaaactaacggagaggaccaatagagattacggaagaagacataagggaccaatttaagacgttttttagttaggggaccatttaaaaaaaaaaaggaa 2293617  T
Q  215 ttaagttaagg 225  Q
    |||||||||||    
T  2293618 ttaagttaagg 2293628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 246
Target Start/End: Complemental strand, 29686380 - 29686251
Alignment:
Q  117 aaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatt 216  Q
    |||||| |||| ||||||||||||||||||||||  | |||||||||| ||||||||||| ||  ||| |||||| |||||||   | | ||  | || |    
T  29686380 aaaaaattaacggagaggaccaaaagaggtaacgacataagacataagggaccaatttgagacaatttatagttaagggaccaaagtgaaaaccaaaaat 29686281  T
Q  217 aagttaagggactaaatgatgtattaagcc 246  Q
    ||||||||||||||||||||||||||||||    
T  29686280 aagttaagggactaaatgatgtattaagcc 29686251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 123
Target Start/End: Complemental strand, 27408997 - 27408881
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaat 106  Q
    |||||| |||||||| |||||||||||||||||| |||||||||| |||  || ||||| ||||||| ||||||| |||||| || |  |||| ||||||    
T  27408997 tggaaggaagaagataaagaaagggaaaaaattaggtgttggtggttcagggtggtacataatagacctgcaatcgaatggtcgaaaacatattaaaaat 27408898  T
Q  107 attaggcattaaaaaac 123  Q
    |||||  ||||||||||    
T  27408897 attagatattaaaaaac 27408881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 43418231 - 43418075
Alignment:
Q  43 tgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaag 142  Q
    ||||||||| ||| ||||||| || || ||| ||||||| ||||||||| || | || ||||||||||| |||||||| |||||| |||| |||| |||     
T  43418231 tgttggtggttcagtgttgtatacgatggacttgcaatcaaatggttgaaatcaaatcaaaaatattagacattaaaatactaacggagatgaccgaaat 43418132  T
Q  143 aggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    || |||| |||||| ||||||| | |||| |||||||  ||| |||||| |||||||    
T  43418131 agataacagaagaatacataaggggccaaattgaaacactttatagttaagggacca 43418075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 21569325 - 21569247
Alignment:
Q  166 gaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaag 244  Q
    |||||| |||||||||||  |||||||||||||| |  || |||||||||||||||||||||| |||||||||||||||    
T  21569325 gaccaaattgaaacgtttaatagttaggggaccaattcaataaaaagaattaagttaagggaccaaatgatgtattaag 21569247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 247
Target Start/End: Original strand, 46795966 - 46796148
Alignment:
Q  65 acaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataag 164  Q
    ||||| ||||||||||| ||||||| | || |||| |||||  |||| ||||||||||||||| |||||||||| || ||  |||||| |||||| || |    
T  46795966 acaatggacatgcaatcaaatggttaaaatcatatcaaaaaatttagacattaaaaaactaacggagaggaccacaatagtaaacggaggaagacttatg 46796065  T
Q  165 agaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaagcct 247  Q
     |||||| |||| ||  ||| ||||||||||||||   | | ||  | || ||||||||||||| ||| ||||||||||||||    
T  46796066 ggaccaaattgagacactttatagttaggggaccaaaattaaaaccaaaaataagttaagggaccaaacgatgtattaagcct 46796148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 6139178 - 6139097
Alignment:
Q  60 tgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaa 141  Q
    |||||| | ||||| ||||||| || |||||| ||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  6139178 tgtacatagtagacctgcaatcaaacggttgaaattatataaaaaatattagacattaaaatactaacagagatgaccaaaa 6139097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 248
Target Start/End: Original strand, 44160400 - 44160533
Alignment:
Q  114 attaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaaga 213  Q
    ||||||| ||||||||||||||||| || | ||||| |||||| ||||||| ||||||||||| |||||| |||  || |||||||  || ||||||  |    
T  44160400 attaaaatactaacagagaggaccacaataagtaacagaagaatacataagggaccaatttgagacgtttctta-ataagggaccaaactgagaaaataa 44160498  T
Q  214 attaagttaagggactaaatgatgtattaagccta 248  Q
    | |||||||||||||   | |||||||||||||||    
T  44160499 aataagttaagggaccggaggatgtattaagccta 44160533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 50531647 - 50531761
Alignment:
Q  16 gaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggcat 115  Q
    |||||||||||||   |||| ||||  ||||| ||| ||| ||||||||||  ||||| ||||||| || |||||| ||||||||||||||||||| |||    
T  50531647 gaagatgaagaaaaaaaaaagattagatgttgatggttcagtgttgtacacggtagacctgcaatcaaacggttgaaattatataaaaaatattagacat 50531746  T
Q  116 taaaaaactaacaga 130  Q
    || || |||||||||    
T  50531747 tagaatactaacaga 50531761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 21570464 - 21570544
Alignment:
Q  166 gaccaatttgaaacgttttttagttaggggacca-ttctaagaaaaagaattaagttaagggactaaatgatgtattaagcc 246  Q
    |||||| |||||||||||  |||||||||||||| ||| || |||||||||||||||||||||| ||| |||||||||||||    
T  21570464 gaccaaattgaaacgtttaatagttaggggaccaattcgaa-aaaaagaattaagttaagggaccaaacgatgtattaagcc 21570544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 34439638 - 34439781
Alignment:
Q  103 aaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattc 202  Q
    ||||||||  ||||| ||||||||| |||| |||||||| ||  ||||| ||||||  || | |||||| ||||||| |||| |||||| |||||||  |    
T  34439638 aaatattatacattagaaaactaacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgaaacattttatagttaagggaccacac 34439737  T
Q  203 taagaaaaagaattaagttaagggactaaatgatgtattaagcc 246  Q
    | ||||||  || |||||||||||||| |  |||||||||||||    
T  34439738 tgagaaaataaaataagttaagggactgagggatgtattaagcc 34439781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 29834427 - 29834471
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataag 164  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||    
T  29834427 aaactaacagagatgaccaaaagaggtaacggcagaagacataag 29834471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 47668590 - 47668718
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    |||||||||||||||||||||||| |   ||||| ||| || ||||| ||||||||||| ||  ||| ||||||||||||||   | | || |  || ||    
T  47668590 aaaaactaacagagaggaccaaaacaataaacggcagatgatataagggaccaatttgagacactttatagttaggggaccaaagtgaaaacagaaaata 47668689  T
Q  218 agttaagggactaaatgatgtattaagcc 246  Q
    |||||| |||| |||||||||||||||||    
T  47668690 agttaaaggaccaaatgatgtattaagcc 47668718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 96652 - 96755
Alignment:
Q  96 atataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttagggg 195  Q
    |||| ||||||||||| ||| ||||||||||| | ||||||||||| |  |||||  | |||||||||| ||||||||| | ||  ||| ||||||||||    
T  96652 atattaaaaatattagacatcaaaaaactaactgcgaggaccaaaatatataacgacaaaagacataagggaccaatttaagacactttatagttagggg 96751  T
Q  196 acca 199  Q
    ||||    
T  96752 acca 96755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 526714 - 526793
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| |||||||||||||||||||||   ||| |||||||| |||||| |||| ||  ||| ||||||||||||||    
T  526714 aaactaacggagaggaccaaaagaggtaacatcagatgacataagggaccaagttgagacactttatagttaggggacca 526793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 2310789 - 2310856
Alignment:
Q  132 aggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||| ||||||||||||||| | |||||||||| |||||| |||| || |||| ||||||||||||||    
T  2310789 aggatcaaaagaggtaacggcaaaagacataagggaccaaattgagacattttatagttaggggacca 2310856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 29833493 - 29833414
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| ||||||||||||||||||||||  | |||| ||||| |||||| |||| || |||| || |||||||||||    
T  29833493 aaactaacggagaggaccaaaagaggtaacgacaaaagatataagggaccaaattgagacattttataattaggggacca 29833414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 31205750 - 31205832
Alignment:
Q  166 gaccaatttgaaacgttttttagttaggggacca-ttctaagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    ||||| ||||||||||||  |||||||||||||| ||| || |||||||||||||||||||||| |||| ||  ||||||||||    
T  31205750 gaccattttgaaacgtttaatagttaggggaccaattcgaa-aaaaagaattaagttaagggaccaaataattaattaagccta 31205832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 31711326 - 31711192
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaat 106  Q
    |||||| ||||||||||||   ||||||||||||  ||||||||| | | ||| ||| ||||| ||| ||||||| ||||||||| |  |||| ||||||    
T  31711326 tggaaggaagaagatgaagcttgggaaaaaattagatgttggtggttgagtgtggtatacaatggacttgcaatcgaatggttgaaacaatatcaaaaat 31711227  T
Q  107 attaggcattaaaaaactaacagagaggaccaaaa 141  Q
    | ||  ||||||||||| ||| || |||| |||||    
T  31711226 agtaaacattaaaaaacaaacggaaaggatcaaaa 31711192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 30672060 - 30672115
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttga 176  Q
    |||||||| ||||||||||||| ||||||||| |||||||||||| |||||| ||||    
T  30672060 aaactaac-gagaggaccaaaacaggtaacggcagaagacataagggaccaaattga 30672115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 248
Target Start/End: Original strand, 33377355 - 33377487
Alignment:
Q  116 taaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaat 215  Q
    ||||| |||||| ||||||||||||| ||  ||||| ||||||  || | |||||| |||| ||  ||| ||||||||||||||   | | ||  | ||     
T  33377355 taaaatactaacggagaggaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatcaaaaa 33377454  T
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| |||||||||||||||||||    
T  33377455 taagttaagggaccaaatgatgtattaagccta 33377487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 248
Target Start/End: Original strand, 47606635 - 47606723
Alignment:
Q  160 ataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    |||| ||||||| |||| |||||||  ||||| || |||||| | | |||||||||||||||||||||||||  |||  ||||||||||    
T  47606635 ataatagaccaaattgagacgttttagagttatggaaccattttgaaaaaaagaattaagttaagggactaagggatcaattaagccta 47606723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 3528366 - 3528295
Alignment:
Q  65 acaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggac 136  Q
    ||||| ||||||||||| ||||||| | || | |||||||| ||||| ||||||||||||||  ||||||||    
T  3528366 acaatggacatgcaatcaaatggttaaaatcacataaaaaaaattagacattaaaaaactaatggagaggac 3528295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 21104250 - 21104433
Alignment:
Q  65 acaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataag 164  Q
    ||||| ||| ||||||| ||||||||| |  |||| ||||||| ||  ||||||||| | ||| || ||||||||||  |  ||||  |||||||||| |    
T  21104250 acaatggacctgcaatcgaatggttgaaacaatatcaaaaatagtaaacattaaaaagcaaacggaaaggaccaaaatggtaaacgacagaagacatatg 21104349  T
Q  165 agaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    ||||||| |||| ||  ||| ||||||||||||||   | | || || || ||| |||||| || ||||||| |||||||||||    
T  21104350 agaccaaattgagacactttatagttaggggaccaaaatgaaaacaaaaaataatttaaggaaccaaatgatatattaagccta 21104433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 176
Target Start/End: Complemental strand, 47667354 - 47667243
Alignment:
Q  65 acaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataag 164  Q
    ||||| ||||||||||| ||||||| | || | ||||||||  |||| |||||||||||||||  ||||||||| |  ||  |||||| |||||| || |    
T  47667354 acaatggacatgcaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacgcagaggaccatattagtaaacggaggaagacttatg 47667255  T
Q  165 agaccaatttga 176  Q
    ||||||| ||||    
T  47667254 agaccaaattga 47667243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 52880923 - 52880856
Alignment:
Q  132 aggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||||||||||||||| | |||||||||  |||||| |||| ||  ||| ||||||||||||||    
T  52880923 aggaccaaaagaggtaacggcaaaagacataaaggaccaaattgagacactttatagttaggggacca 52880856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 52981121 - 52981204
Alignment:
Q  96 atataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaac 179  Q
    |||| ||||||||||| ||| ||||||||||| | ||||||||||| ||  |||   |||||||||||| ||||| ||||||||    
T  52981121 atattaaaaatattagacataaaaaaactaactgcgaggaccaaaacagtaaacaacagaagacataagggaccagtttgaaac 52981204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 53757364 - 53757302
Alignment:
Q  187 agttaggggaccattctaagaaaaagaattaagtt-aagggactaaatgatgtattaagccta 248  Q
    ||||| ||||||||| ||| ||||||||||||||| ||||||| |||||||  ||||||||||    
T  53757364 agttatgggaccattttaaaaaaaagaattaagttaaagggaccaaatgatcaattaagccta 53757302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 138
Target Start/End: Complemental strand, 41348415 - 41348342
Alignment:
Q  65 acaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggacca 138  Q
    ||||| ||||||||||| |||| || | || |||| |||||| |||  |||||||||||||| |||||||||||    
T  41348415 acaatggacatgcaatcaaatgattaaaatcatatcaaaaattttatacattaaaaaactaatagagaggacca 41348342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 138
Target Start/End: Original strand, 56001209 - 56001281
Alignment:
Q  65 acaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggacca 138  Q
    ||||| ||||||||||| ||||||| | || | |||||||| ||||| |||||||||||||||  |||||||||    
T  56001209 acaatggacatgcaatcaaatggttaaaatcacataaaaaa-attagacattaaaaaactaacgaagaggacca 56001281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 6616302 - 6616334
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| |||||||||||||||||||    
T  6616302 taagttaagggaccaaatgatgtattaagccta 6616334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 141
Target Start/End: Original strand, 7989344 - 7989452
Alignment:
Q  33 aaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagaga 132  Q
    |||||||| |||||||||| ||||||||  | ||||| ||| ||||||| ||||  ||| |  |||| || ||||||| || ||||||||||||| ||||    
T  7989344 aaaaattaggtgttggtggttcattgttacatacaatggacttgcaatcaaatgactgaaaccatatcaagaatattaagcgttaaaaaactaacggaga 7989443  T
Q  133 ggaccaaaa 141  Q
     || |||||    
T  7989444 tgatcaaaa 7989452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 28655739 - 28655675
Alignment:
Q  75 tgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaa 139  Q
    ||||||| ||||| ||| || ||||  || ||||||||||||||||||||||| ||| |||||||    
T  28655739 tgcaatctaatggctgaaatcatatctaagatattaggcattaaaaaactaacggagtggaccaa 28655675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 31711117 - 31711085
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| |||||||||||||||||||    
T  31711117 taagttaagggaccaaatgatgtattaagccta 31711085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 245
Target Start/End: Complemental strand, 53150526 - 53150398
Alignment:
Q  117 aaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatt 216  Q
    ||||||| ||| || | ||||||||||| ||| |  | |||| ||||| ||||| ||| | ||||||||||||||   ||||||| | ||||||| ||||    
T  53150526 aaaaaaccaacggataagaccaaaagagataatgacaaaagatataagggaccagtttaagacgttttttagttaaaagaccattgtgagaaaaataatt 53150427  T
Q  217 aagttaagggactaaatgatgtattaagc 245  Q
    ||||||| |||| | |||||  |||||||    
T  53150426 aagttaaaggaccagatgatcaattaagc 53150398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 160; Significance: 3e-85; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 51217855 - 51217616
Alignment:
Q  9 gaagaaagaagatgaagaaaggg-----aaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaa 103  Q
    |||||||||||||||||||| ||     |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||    
T  51217855 gaagaaagaagatgaagaaatggaaaaaaaaaaattaagtgttgatggctcattgttgtacacaatagacatgcaatctaatggttgaaattatatcaaa 51217756  T
Q  104 aatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattct 203  Q
    |||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||  | ||||||| |||||||||||||||    
T  51217755 aatattagtcattaaaaaactaacggagaggaccaagagaggtaacggaagaagacataagggaccaatttgaggcattttttaattaggggaccattct 51217656  T
Q  204 aagaaaaagaattaagttaagggactaaatgatgtattaa 243  Q
    |||||||||||||||||||||| |||||| ||||||||||    
T  51217655 aagaaaaagaattaagttaaggaactaaacgatgtattaa 51217616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 246
Target Start/End: Original strand, 34654247 - 34654464
Alignment:
Q  32 aaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagag 131  Q
    |||||| || |||||| ||| ||||||||||| ||||| ||| ||||||| ||||||||| || |||| ||||||||||| |||| ||||| |||| |||    
T  34654247 aaaaaactatgtgttgttggttcattgttgtatacaatggacctgcaatcgaatggttgaaatcatattaaaaatattagtcatttaaaaattaacggag 34654346  T
Q  132 aggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattct---aagaaaaagaattaagttaagggac 228  Q
    |||||||| ||||||||||| ||||||||||||||||||| |||||||||||| |||||| || |||||| |   || || || |||||| |||||||||    
T  34654347 aggaccaatagaggtaacggtagaagacataagagaccaaattgaaacgttttatagttaaggtaccattttgaaaaaaataataattaaattaagggac 34654446  T
Q  229 taaatgatgtattaagcc 246  Q
     |||||||||||||||||    
T  34654447 caaatgatgtattaagcc 34654464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 51218959 - 51219088
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    |||||||||| |||||||||||  ||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  51218959 aaaaactaacggagaggaccaattgagttaacggaagaagacataagggaccaatttgagacgttttttagttaggggaccattttgagaaaaagaatta 51219058  T
Q  218 agttaagggactaaatgatgtattaagcct 247  Q
    |||||||||| |||| ||||||||||||||    
T  51219059 agttaagggagtaaacgatgtattaagcct 51219088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 27689406 - 27689277
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgtt-ttttagttaggggaccattctaagaaaaagaatt 216  Q
    |||||||||| ||||||||||||||||||||||  |||| |||||||||||||| |||||||||| ||||||||| ||||||||| ||| ||||||||||    
T  27689406 aaaaactaacggagaggaccaaaagaggtaacgacagaaaacataagagaccaaattgaaacgtttttttagttaagggaccattttaaaaaaaagaatt 27689307  T
Q  217 aagttaagggactaaatgatgtattaagcc 246  Q
    || ||||||||||||||| |||||||||||    
T  27689306 aaattaagggactaaatggtgtattaagcc 27689277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 118 - 248
Target Start/End: Original strand, 30551582 - 30551712
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    |||||||||| |||| |||||||||||||||||  |||| ||||||| |||||| |||||| |||||||||||| ||||||||| | | |||||||||||    
T  30551582 aaaaactaacggagatgaccaaaagaggtaacgatagaaaacataagggaccaaattgaaatgttttttagttaagggaccattttgaaaaaaagaatta 30551681  T
Q  218 agttaagggactaaatgatgtattaagccta 248  Q
    | |||||||||||||||||||||||||||||    
T  30551682 aattaagggactaaatgatgtattaagccta 30551712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 37624563 - 37624691
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    |||||||||| ||||||||||||||| ||||||  |||| ||||||  |||||| ||||||||||||||||||| ||||||||| | | ||||| |||||    
T  37624563 aaaaactaacggagaggaccaaaagatgtaacgacagaaaacataacggaccaaattgaaacgttttttagttaagggaccattttgaaaaaaataatta 37624662  T
Q  218 agttaagggactaaatgatgtattaagcc 246  Q
    | |||||||||||||||||||||||||||    
T  37624663 aattaagggactaaatgatgtattaagcc 37624691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 22766813 - 22766943
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattct-aagaaaaagaatt 216  Q
    |||||||||| || |||||||||||||| ||||  |||| ||||||| || ||| ||||||||||||||||||| ||||||||| | || ||||||||||    
T  22766813 aaaaactaacggaaaggaccaaaagaggcaacgacagaaaacataagggatcaaattgaaacgttttttagttaagggaccattttgaaaaaaaagaatt 22766912  T
Q  217 aagttaagggactaaatgatgtattaagcct 247  Q
    || ||||||||||||||||||||||||||||    
T  22766913 aaattaagggactaaatgatgtattaagcct 22766943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 23082119 - 23082248
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    |||||||||| || |||||||||||||| ||||  |||| | ||||| |||||| ||||||||||||||||||| ||||||||| | | |||||||||||    
T  23082119 aaaaactaacggaaaggaccaaaagaggcaacgacagaaaatataagggaccaaattgaaacgttttttagttaagggaccattttgaaaaaaagaatta 23082218  T
Q  218 agttaagggactaaatgatgtattaagcct 247  Q
    | |||| |||||||||||||||||||||||    
T  23082219 aattaaaggactaaatgatgtattaagcct 23082248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 9415747 - 9415618
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    ||||||||||  || ||||||||| ||||||||| | || ||||||| ||||||||| | |||||||||||||| ||||||||| | | |||||||||||    
T  9415747 aaaaactaacgaagtggaccaaaataggtaacggcataatacataagggaccaatttaagacgttttttagttaagggaccattatgaaaaaaagaatta 9415648  T
Q  218 agttaagggactaaatgatgtattaagcct 247  Q
    ||||||||||||| |||||  |||||||||    
T  9415647 agttaagggactagatgatcaattaagcct 9415618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 26055131 - 26055011
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaat 106  Q
    |||||| ||||||||||||||||||||||||||| ||| || ||| ||| | ||||| | ||||||| ||||||| ||||||||| ||||||| | ||||    
T  26055131 tggaaggaagaagatgaagaaagggaaaaaattatgtggtgatggttcactattgtatataatagacctgcaatctaatggttgaaattatatcataaat 26055032  T
Q  107 attaggcattaaaaaactaac 127  Q
    ||| | |||||||||||||||    
T  26055031 atttgacattaaaaaactaac 26055011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 25889487 - 25889543
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttga 176  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  25889487 aaactaacggagaggaccaaaagaggtaacggaagaagacataagtgaccaaattga 25889543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 44977344 - 44977216
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||||| ||||| ||| | ||  ||| ||||||||||||||   | | ||  | || ||    
T  44977344 aaaaactaacagagatgaccaaatgaggtaacggcagaagacataagggaccagtttaagacactttatagttaggggaccaaagtgaaaaccaaaaata 44977245  T
Q  218 agttaagggactaaatgatgtattaagcc 246  Q
    ||||||||||| |||| ||||||||||||    
T  44977244 agttaagggaccaaataatgtattaagcc 44977216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 35683172 - 35683097
Alignment:
Q  124 taacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||| ||||||||||||||||||||||| |||||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  35683172 taacggagaggaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttaggggacca 35683097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 48935105 - 48935184
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| |||| |||||||||||||||||| |||||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  48935105 aaactaacggagatgaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttaggggacca 48935184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 46127897 - 46127783
Alignment:
Q  133 ggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaa 232  Q
    ||||||||||| ||||| | |||||||||||| || ||| ||||||||||| ||| ||| ||||||||| | | | ||| |||||||||||||||  |||    
T  46127897 ggaccaaaagaagtaaccgtagaagacataagtgatcaaattgaaacgtttgttacttaagggaccattgttaaataaaaaattaagttaagggatcaaa 46127798  T
Q  233 tgatgtattaagcct 247  Q
    ||||  |||||||||    
T  46127797 tgatcaattaagcct 46127783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 13929524 - 13929292
Alignment:
Q  14 aagaagatgaagaaagggaaaaaa--ttaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattag 111  Q
    ||||||||||||||||||||||||  ||| |||||||||||||| ||| ||| ||||| ||| ||| ||| ||||||  | |  |||| |||||||||||    
T  13929524 aagaagatgaagaaagggaaaaaaaattaggtgttggtggctcaatgtggtatacaatggacctgccatcgaatggtcaaaacaatatcaaaaatattag 13929425  T
Q  112 gcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaa 211  Q
     ||||||||||  ||| || |||||||| |     ||||||||||||  || | |||||| |||| ||  ||| |||||| |||||||   | | ||  |    
T  13929424 acattaaaaaataaacggacaggaccaagatgataaacggaagaagatttacgggaccaaattgagacactttatagttaagggaccaaattgaaaacca 13929325  T
Q  212 gaattaagttaagggactaaatgatgtattaag 244  Q
     || ||||||||||||| |||||||||||||||    
T  13929324 aaaataagttaagggaccaaatgatgtattaag 13929292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 2237973 - 2238052
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| ||||||||||||||||||||||  |||||||||||| |||||| |||| ||  ||| |||||| |||||||    
T  2237973 aaactaacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagttatgggacca 2238052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 34531784 - 34531705
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    ||||| || |||||||||||||||| |||||  ||||||||||||||||||| |||| || |||| ||||||| ||||||    
T  34531784 aaacttacggagaggaccaaaagagataacgacagaagacataagagaccaaattgagacattttatagttagaggacca 34531705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 35684198 - 35684276
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| ||||||||||||||||||||||  |||||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  35684198 aaactaacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagac-atttatagttaggggacca 35684276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 9417068 - 9417142
Alignment:
Q  96 atataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagacca 170  Q
    |||| ||||||||||  ||||||||||||||| ||||||||  |||||||| |||| |||||||||||| |||||    
T  9417068 atattaaaaatattatacattaaaaaactaacggagaggactgaaagaggtgacggtagaagacataagggacca 9417142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 27690607 - 27690697
Alignment:
Q  103 aaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttagg 193  Q
    |||||||| | || ||||||||||| | ||||||||||| |  |||||| | || |||||||| |||||||||| ||||||||||||||||    
T  27690607 aaatattaagaatcaaaaaactaactgtgaggaccaaaatacataacggtaaaatacataagaaaccaatttgagacgttttttagttagg 27690697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 48973319 - 48973242
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggac 197  Q
    ||||||||||||||| |||||||||||||||  |||||||||||| || ||| |||| ||  ||| ||||||||||||    
T  48973319 aaactaacagagagggccaaaagaggtaacgacagaagacataagggatcaaattgagacactttatagttaggggac 48973242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 2236930 - 2236855
Alignment:
Q  124 taacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||| ||||||| ||||||||||||||  |||||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  2236930 taacggagaggatcaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagttaggggacca 2236855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 6709749 - 6709678
Alignment:
Q  160 ataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaa 231  Q
    ||||| |||||| |||| |||||||  |||||  |||||||| ||| |||||||||||||||||||||||||    
T  6709749 ataagggaccaaattgagacgttttagagttataggaccattttaaaaaaaagaattaagttaagggactaa 6709678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 138
Target Start/End: Original strand, 40110592 - 40110665
Alignment:
Q  65 acaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggacca 138  Q
    ||||| ||||||||||| ||||||| | || |||| || ||| |||  ||||||||||||||||||||||||||    
T  40110592 acaatggacatgcaatcaaatggttaaaatcatatcaataattttatacattaaaaaactaacagagaggacca 40110665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 151
Target Start/End: Complemental strand, 50678486 - 50678453
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacgg 151  Q
    ||||||||||||||||||||||||||||||||||    
T  50678486 aaaaactaacagagaggaccaaaagaggtaacgg 50678453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 33941483 - 33941420
Alignment:
Q  75 tgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggacca 138  Q
    ||||||| || |||| | || |||| |||||| |||| ||||||||||||||||||||||||||    
T  33941483 tgcaatcaaacggttaaaatcatattaaaaatgttagacattaaaaaactaacagagaggacca 33941420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 34532713 - 34532776
Alignment:
Q  136 ccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||||||||||| | |||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  34532713 ccaaaagaggtaacggcaaaagacataagggaccaaattgagacactttatagttaggggacca 34532776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 37623388 - 37623294
Alignment:
Q  103 aaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggac 197  Q
    |||||||| | || ||||||||||| | || |||||||| || |||||| | || | ||||| ||||||||| | |||||||||| |||||||||    
T  37623388 aaatattaagaatcaaaaaactaactgcgatgaccaaaatagataacggtaaaatatataagggaccaatttaagacgttttttaattaggggac 37623294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 1061459 - 1061524
Alignment:
Q  132 aggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggac 197  Q
    |||||||||||||||||||| | |||||||||| |||||| || | ||  ||| ||||||||||||    
T  1061459 aggaccaaaagaggtaacggcaaaagacataagtgaccaaattaagacactttatagttaggggac 1061524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 186
Target Start/End: Original strand, 22169210 - 22169279
Alignment:
Q  117 aaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgtttttt 186  Q
    ||||||||||| | || |||||||| || |||||| |||| ||||||| ||||| ||||| |||||||||    
T  22169210 aaaaaactaactgcgaagaccaaaatagataacggcagaatacataagggaccagtttgagacgtttttt 22169279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 3978069 - 3978037
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| |||||||||||||||||||    
T  3978069 taagttaagggaccaaatgatgtattaagccta 3978037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 9210073 - 9210137
Alignment:
Q  77 caatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaa 141  Q
    ||||| ||||||||| ||||||| || ||||| || ||||||||||||||| | || ||||||||    
T  9210073 caatcaaatggttgaaattatatcaagaatataagacattaaaaaactaacggcgatgaccaaaa 9210137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 25785993 - 25785961
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| |||||||||||||||||||    
T  25785993 taagttaagggaccaaatgatgtattaagccta 25785961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 28999984 - 28999940
Alignment:
Q  96 atataaaaaatattaggcattaaaaaactaacagagaggaccaaa 140  Q
    |||| ||||||||||  |||||||||||||| |||||||||||||    
T  28999984 atattaaaaatattatacattaaaaaactaatagagaggaccaaa 28999940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 40533541 - 40533613
Alignment:
Q  65 acaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggacc 137  Q
    ||||| ||||||||||||||||||| | || |||| |||| | |||| |||||||||| |||| ||| |||||    
T  40533541 acaatggacatgcaatccaatggttaaaatcatatcaaaagttttagacattaaaaaattaacggaggggacc 40533613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 5e-62; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 5 - 228
Target Start/End: Original strand, 4513633 - 4513856
Alignment:
Q  5 gatggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaa 104  Q
    ||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  4513633 gatgggaggaagaagatgaagaaagggaaaaaattaggtgttggtggctcattgttgtacacaatagacatgcaatcaaatggttgaaattatatcaaaa 4513732  T
Q  105 atattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattcta 204  Q
    ||||||   | |||||||||||| ||||| | ||||||||||||||  ||||||||||| |||||||||| | |||||||||||||| |||||||| | |    
T  4513733 atattatttaataaaaaactaacggagagaatcaaaagaggtaacgacagaagacataaaagaccaatttaagacgttttttagtta-gggaccatacca 4513831  T
Q  205 a-gaaaaagaattaagttaagggac 228  Q
    | |||||||||| ||| ||||||||    
T  4513832 aggaaaaagaatgaagctaagggac 4513856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 7 - 248
Target Start/End: Original strand, 14716075 - 14716325
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaaaaaa--ttaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaa 104  Q
    |||||| || |||||||||||||||||||||  ||| |||||||||| ||||||||||| | ||||||||||||||| ||||  ||| || | || |||     
T  14716075 tggaaggaaaaagatgaagaaagggaaaaaaaattaggtgttggtggttcattgttgtatataatagacatgcaatcgaatgactgaaatcaaatcaaag 14716174  T
Q  105 atattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagac-------ataagagaccaatttgaaacgttttttagttaggggac 197  Q
    |||||||  |||||||||||||  ||||||||||||||||||||| |||||||||        |||||||||||||| | | ||||||||||||| ||||    
T  14716175 atattagatattaaaaaactaatggagaggaccaaaagaggtaacagaagaagacttaagagttaagagaccaatttaagatgttttttagttagcggac 14716274  T
Q  198 cattctaagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    |||||| | |||||||||||||||||| ||  |||||||||||||||||||    
T  14716275 cattctcaaaaaaagaattaagttaagtgatcaaatgatgtattaagccta 14716325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 26205954 - 26206145
Alignment:
Q  32 aaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagag 131  Q
    ||||||||| |||||||| | ||||||||||| ||||||||||||||||| ||||||||| |||||||| |||||||||| ||||||||||||||| |||    
T  26205954 aaaaaattaggtgttggttgttcattgttgtatacaatagacatgcaatcgaatggttgaaattatatataaaatattagtcattaaaaaactaacggag 26206053  T
Q  132 aggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaag 224  Q
    ||||||||||||||||| |  | |||||||||| || ||||||   || ||||||| |||||||| ||| || | ||||||||||||||||||    
T  26206054 aggaccaaaagaggtaatgacaaaagacataagggatcaatttatgac-ttttttaattaggggatcatactgaaaaaaagaattaagttaag 26206145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 118 - 244
Target Start/End: Complemental strand, 14714615 - 14714489
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||  ||||||||||||||||||| ||||| ||||| |||||||  |||| |||||    
T  14714615 aaaaactaacggagaggaccaaaagtggtaacggaagaagacataagcaaccaatttgaaacgtttttaagttaagggactattctaaacaaaaaaatta 14714516  T
Q  218 agttaagggactaaatgatgtattaag 244  Q
    |||||||| |||||| |||||||||||    
T  14714515 agttaaggaactaaacgatgtattaag 14714489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 4512229 - 4512101
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    |||||||||  |||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||| ||||||| ||  |||||||||||||    
T  4512229 aaaaactaatggagaggaccaaaagaggtaacggaagaagacacaagggaccaatttgagacgttttttagttatgggacca-tcagagaaaaagaatta 4512131  T
Q  218 agttaagggactaaatgatgtattaagcct 247  Q
    ||||||||||| ||  ||||||||||||||    
T  4512130 agttaagggaccaacggatgtattaagcct 4512101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 41296447 - 41296575
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    |||||||||| |||||||||||||||| |||||  | || ||||||| |||||| ||||||||||||||||||| ||||||||| ||| |||||||||||    
T  41296447 aaaaactaacggagaggaccaaaagagataacgacaaaaaacataagggaccaaattgaaacgttttttagttaagggaccattttaaaaaaaagaatta 41296546  T
Q  218 agttaagggactaaatgatgtattaagcc 246  Q
    | |||||||||||||| || |||||||||    
T  41296547 aattaagggactaaataatttattaagcc 41296575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 201
Target Start/End: Original strand, 4830582 - 4830751
Alignment:
Q  32 aaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagag 131  Q
    ||||||||| |||||| ||| ||| ||||||| ||||| ||| | ||||| ||||||||| || |||| ||||||||||| |||| |||||||||| |||    
T  4830582 aaaaaattaggtgttgttggttcaatgttgtatacaatggacctacaatcgaatggttgaaatcatatcaaaaatattagacattcaaaaactaacggag 4830681  T
Q  132 aggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccatt 201  Q
    ||||| ||||||| |||||| || ||| |||||||||||| || ||||||||| |||||| || ||||||    
T  4830682 aggactaaaagagataacggtaggagatataagagaccaaattaaaacgttttatagttaaggtaccatt 4830751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 243
Target Start/End: Complemental strand, 37982788 - 37982689
Alignment:
Q  144 ggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaa 243  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||||||| ||  ||||||||||    
T  37982788 ggtaacggaagaagacataagggaccaatttgagacgttttttagttagggaaccatactgagaaaaagaattaagttaagggaccaacggatgtattaa 37982689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 26205136 - 26205058
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttagggga 196  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  26205136 aaaaactaacggagaggaccaaacgaggtaacggaagaagacataagggaccaatttgagacgttttttagttaaggga 26205058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 228
Target Start/End: Original strand, 36422692 - 36422825
Alignment:
Q  96 atataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacg-ttttttagttaggg 194  Q
    |||| ||||||||||| ||||||||||||| | ||||| ||||||| || |||||  | || ||||||| ||||||||||||||| ||||||||||| ||    
T  36422692 atattaaaaatattagacattaaaaaactatctgagagtaccaaaatagataacgacataatacataagggaccaatttgaaacgtttttttagttaagg 36422791  T
Q  195 gaccattctaagaaaaagaattaagttaagggac 228  Q
    ||||||| | | | ||||||||||||||||||||    
T  36422792 gaccattgtgaaataaagaattaagttaagggac 36422825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 85 - 246
Target Start/End: Original strand, 8538584 - 8538746
Alignment:
Q  85 tggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacg-ttt 183  Q
    ||||||| ||||||| ||||||||||| |||||||||| |||| |||| |||||||| ||||||||   |||   ||||| ||||||||||| ||| |||    
T  8538584 tggttgaaattatatcaaaaatattagtcattaaaaaattaacggagatgaccaaaataggtaacgacggaatgtataagggaccaatttgagacgtttt 8538683  T
Q  184 tttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaagcc 246  Q
    |||||||| | |||||  || ||||||  || |||||||||||||    ||||||||||||||    
T  8538684 tttagttaagagaccaaactgagaaaataaaataagttaagggaccggttgatgtattaagcc 8538746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 6707152 - 6706968
Alignment:
Q  14 aagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggc 113  Q
    |||||||||||||| |||||||||||| ||| || ||| |||   |||||   ||| ||| ||||||| ||||||||| ||||||| | ||||||| | |    
T  6707152 aagaagatgaagaaggggaaaaaattatgtggtgatggttcaca-ttgtatttaatggacctgcaatctaatggttgaaattatatcataaatatttgac 6707054  T
Q  114 attaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||||||||| ||| ||||||||| ||  ||||||||||||  || |  ||||| |||| ||  ||| ||||||||||||||    
T  6707053 attaaaaaactaacggaggggaccaaaatagtaaacggaagaagatttatggaaccaaattgagacactttatagttaggggacca 6706968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 2305661 - 2305585
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttagggga 196  Q
    |||||||| ||||||||||||||||||||||| |||||||||||| |||||| |||| ||  ||| |||||||||||    
T  2305661 aaactaacggagaggaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttagggga 2305585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 57 - 176
Target Start/End: Complemental strand, 15850296 - 15850177
Alignment:
Q  57 tgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaa 156  Q
    ||||||| || || ||| ||||||| || |||||| || | |||||||||||||| |||| ||| |||||||||||||||| ||| ||||||| ||||||    
T  15850296 tgttgtatacgatggacttgcaatcaaacggttgaaatcaaataaaaaatattagacatttaaatactaacagagaggaccgaaataggtaacagaagaa 15850197  T
Q  157 gacataagagaccaatttga 176  Q
     ||| ||| |||||| ||||    
T  15850196 tacacaagggaccaaattga 15850177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 41312621 - 41312565
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttga 176  Q
    |||||||| ||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  41312621 aaactaacggagaggaccaaaagaggtaacggcataagacataagagaccaaattga 41312565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 2306656 - 2306735
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| ||||||||||||||||||||||| |||||||||||  |||||| |||| ||  |||  |||||||||||||    
T  2306656 aaactaacggagaggaccaaaagaggtaacggcagaagacataatggaccaaattgagacactttacagttaggggacca 2306735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 3665345 - 3665266
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||  |||| || ||||||||||||||| |||||||||||| |||||| ||||||| |||| ||||||| ||||||    
T  3665345 aaactaatggagatgatcaaaagaggtaacggcagaagacataagggaccaaattgaaacattttatagttagaggacca 3665266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 33836890 - 33836811
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| ||||||||||||||||||||||  |||||||||||  |||||| |||| ||  ||| ||||||||||||||    
T  33836890 aaactaacggagaggaccaaaagaggtaacgatagaagacataaatgaccaaattgagacactttatagttaggggacca 33836811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 37867991 - 37867856
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaaaaaa-ttaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaa 105  Q
    |||||| ||||||||||||||||| |||||| ||| |||||||||| ||| ||| ||| | ||||||| | ||||| || ||| || |  |||| |||||    
T  37867991 tggaaggaagaagatgaagaaaggaaaaaaaattaggtgttggtggttcaatgtggtatataatagacctacaatcgaacggtcgaaaacatatcaaaaa 37867892  T
Q  106 tattaggcattaaaaaactaacagagaggaccaaaa 141  Q
    |||||  ||||||||||| |||||| | ||||||||    
T  37867891 tattaaacattaaaaaacaaacagacatgaccaaaa 37867856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 247
Target Start/End: Complemental strand, 28109052 - 28108831
Alignment:
Q  26 aaagggaaaaaattaag-tgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaact 124  Q
    ||||||||||||||||| ||||||||| ||| | || || | ||||||| ||||||| ||||||| | ||  ||| |||| |||||| ||| |||||| |    
T  28109052 aaagggaaaaaattaagatgttggtggttcactattataaa-aatagacctgcaatcgaatggtttaaatcgtatcaaaattattagacataaaaaaatt 28108954  T
Q  125 aacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaag 224  Q
    || ||||||||| |||| | ||||||  | |  ||||||| ||||||||| |  | |||||||||||| ||||||  || | || |  || |||||||||    
T  28108953 aatagagaggactaaaataagtaacgacaaataacataagggaccaatttaagtcattttttagttagaggaccaaactgaaaatagaaaataagttaag 28108854  T
Q  225 ggactaaatgatgtattaagcct 247  Q
    ||||  ||||||||||| |||||    
T  28108853 ggaccgaatgatgtattgagcct 28108831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 41295243 - 41295149
Alignment:
Q  103 aaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggac 197  Q
    |||||||| | || ||||||||||| | || |||||||| || |||||| |||| | ||||| ||||||||||| |||||||||| |||||||||    
T  41295243 aaatattaagaatcaaaaaactaactgcgatgaccaaaatagataacggtagaatatataagggaccaatttgagacgttttttaattaggggac 41295149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 3255885 - 3255952
Alignment:
Q  132 aggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    ||||||||| ||| |||||| | ||||||||||||||||| |||||||  ||| ||||||||||||||    
T  3255885 aggaccaaatgagataacggcaaaagacataagagaccaaattgaaacactttatagttaggggacca 3255952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 10368266 - 10368401
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaaaaaa-ttaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaa 105  Q
    |||||| ||||||||||||||||| |||||| ||| |||||||||| ||| ||| ||| | ||| ||||||||||| || ||| || |  |||| |||||    
T  10368266 tggaaggaagaagatgaagaaaggaaaaaaaattaggtgttggtggttcagtgtggtatataatggacatgcaatcgaacggtcgaaaacatatcaaaaa 10368365  T
Q  106 tattaggcattaaaaaactaacagagaggaccaaaa 141  Q
    |||||   |||||||||| ||| || | ||||||||    
T  10368366 tattaaatattaaaaaacaaacggacatgaccaaaa 10368401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 40174715 - 40174780
Alignment:
Q  75 tgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaa 141  Q
    ||||||| ||||||||| || |||||||||||||||  ||||||||||||||| |||| ||||||||    
T  40174715 tgcaatcgaatggttgaaatcatataaaaaatatta-acattaaaaaactaacggagatgaccaaaa 40174780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 8537135 - 8537062
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagtta 191  Q
    |||||||||| |||| |||||||| || |||||  |||| ||||||| ||||||||||| || |||||||||||    
T  8537135 aaaaactaacggagatgaccaaaatagataacgacagaatacataagggaccaatttgagacattttttagtta 8537062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 4630091 - 4630158
Alignment:
Q  132 aggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    ||||||||||||||||||   | ||||||||||||||||| |||| ||  ||| ||||||||||||||    
T  4630091 aggaccaaaagaggtaacaacaaaagacataagagaccaaattgagacactttatagttaggggacca 4630158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 7038229 - 7038356
Alignment:
Q  14 aagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggc 113  Q
    ||||||||||||   ||||||||||||  ||||||||| | | |||  || ||||| ||| ||||||| ||||||||| |  |||| ||||||| ||  |    
T  7038229 aagaagatgaagcttgggaaaaaattagatgttggtggttgagtgtgatatacaatggacttgcaatcgaatggttgaaacaatatcaaaaatagtaaac 7038328  T
Q  114 attaaaaaactaacagagaggaccaaaa 141  Q
    |||||||||| ||| || ||||||||||    
T  7038329 attaaaaaacaaacggaaaggaccaaaa 7038356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 11386858 - 11386735
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaat 106  Q
    |||||| ||||||| |||||||| |||||||||| | |||||||  ||||||| ||| | ||| ||| ||||||| |||| |    || |||| ||||||    
T  11386858 tggaaggaagaagacgaagaaagagaaaaaattaggcgttggtgattcattgtagtatataatggacctgcaatcaaatgatcacaataatattaaaaat 11386759  T
Q  107 attaggcattaaaaaactaacaga 130  Q
    ||||  ||||||||||| ||||||    
T  11386758 attaaacattaaaaaacaaacaga 11386735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 228
Target Start/End: Original strand, 15850652 - 15850762
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    ||||||||||  || ||||||||| ||||||| | ||||||  || |||||||| ||||||| |||| ||||||  ||| ||  |||||||||  || ||    
T  15850652 aaaaactaacgaagtggaccaaaataggtaacagcagaagagttatgagaccaaattgaaacattttatagttaaaggagcaaactaagaaaataaaata 15850751  T
Q  218 agttaagggac 228  Q
    |||||||||||    
T  15850752 agttaagggac 15850762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 19397709 - 19397647
Alignment:
Q  65 acaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaac 127  Q
    ||||| ||||||||||||||||||| | ||||||| |||| | |||| |||||||||| ||||    
T  19397709 acaatggacatgcaatccaatggttaaaattatatcaaaagttttagacattaaaaaaataac 19397647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 23178832 - 23178898
Alignment:
Q  75 tgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaa 141  Q
    ||||||| ||||||||| ||||||| | |||| |||  ||||||||||||||| |||| ||||||||    
T  23178832 tgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaa 23178898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 23590089 - 23590155
Alignment:
Q  75 tgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaa 141  Q
    ||||||| ||||||||| ||||||| | |||| |||  ||||||||||||||| |||| ||||||||    
T  23590089 tgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaa 23590155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 228
Target Start/End: Complemental strand, 42366966 - 42366882
Alignment:
Q  146 taacggaagaagacataagagaccaatttgaaacgtttttt--agttaggggaccattctaagaaaaagaattaagttaagggac 228  Q
    ||||||||| | | ||||| ||||||||||| || ||||||  |||| |||||||| | ||| | ||||||||||||||||||||    
T  42366966 taacggaagcaaatataagggaccaatttgagacattttttttagttgggggaccactttaaaataaagaattaagttaagggac 42366882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 7038423 - 7038455
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| |||||||||||||||||||    
T  7038423 taagttaagggaccaaatgatgtattaagccta 7038455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 244
Target Start/End: Original strand, 41796043 - 41796071
Alignment:
Q  216 taagttaagggactaaatgatgtattaag 244  Q
    |||||||||||||||||||||||||||||    
T  41796043 taagttaagggactaaatgatgtattaag 41796071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 24697 - 24937
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaat 106  Q
    |||||| ||||||||| ||||||||||||||||  |||||||||| ||||||||||| ||||||||||||||||  ||||||| | || | |||||||||    
T  24697 tggaaggaagaagatggagaaagggaaaaaatttggtgttggtggttcattgttgtatacaatagacatgcaattgaatggttaaaatcacataaaaaat 24796  T
Q  107 attaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaag 206  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||||| ||||||||||| |||||| |||||||  ||| || |||||||||||  || |     
T  24797 attagacattaaaaaactaacggagatgaccaaaataggtaacggaggaagacataagggaccaaattgaaacactttataattaggggaccaaactgaa 24896  T
Q  207 aaaaagaattaagttaagggactaaatgatgtattaagcct 247  Q
    ||  | || ||| ||||||||| ||| ||||||||||||||    
T  24897 aaccaaaaataaattaagggaccaaacgatgtattaagcct 24937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 3e-51; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 5 - 246
Target Start/End: Complemental strand, 43111669 - 43111424
Alignment:
Q  5 gatggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatc-----caatggttgagattatat 99  Q
    |||||||| |||||||||||||||||| |||||||| | |||||||| ||||||||||| |||||||||||||||||      ||||||||| |||||||    
T  43111669 gatggaaggaagaagatgaagaaaggggaaaaattaggcgttggtggttcattgttgtatacaatagacatgcaatcgaatataatggttgaaattatat 43111570  T
Q  100 aaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
     ||||||||||| || ||| |||||||| |||| || ||||| ||||||||  | |||||||||| || |||||||| ||||||||||||||||||||||    
T  43111569 caaaaatattagtcaataataaactaacggagatga-caaaaaaggtaacgacaaaagacataagtgatcaatttgagacgttttttagttaggggacca 43111471  T
Q  200 ttctaagaaaaagaattaagttaagggactaaatgatgtattaagcc 246  Q
      || | |||||||||||||||||||||| ||   ||||||||||||    
T  43111470 cactgaaaaaaagaattaagttaagggaccaacgaatgtattaagcc 43111424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 5 - 246
Target Start/End: Complemental strand, 24494214 - 24493980
Alignment:
Q  5 gatggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaa 104  Q
    |||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||| ||||||||| ||||            
T  24494214 gatggaaggaagaagatgaagaaatggaaaaaattaggtgttggttgctcattgttgtatacaatagacatgcaatcgaatggttgaaatta-------- 24494123  T
Q  105 atattaggcatt-aaaaaactaac----agagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
        ||| |||| |||||||||||    |||||||||||||||| |||| |  | |||||||||| ||||||||||| || |||||||||||||||| ||    
T  24494122 ----tagtcattaaaaaaactaacggagagagaggaccaaaagaagtaatgacaaaagacataagggaccaatttgagacattttttagttaggggatca 24494027  T
Q  200 ttctaagaaaaagaattaagttaagggactaaatgatgtattaagcc 246  Q
    | || |||||||||||||||||||| ||| ||  |||||||||||||    
T  24494026 tactgagaaaaagaattaagttaagagaccaacggatgtattaagcc 24493980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 24495044 - 24495173
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaag-aaaaagaatt 216  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||| | |||||||||||| |||| ||| || || ||||||||||    
T  24495044 aaaaactaacggagaggaccaaacgaggtaacagaagaagacataagggaccaatttgagaggttttttagttaagggatcatactgagaaaaaagaatt 24495143  T
Q  217 aagttaagggactaaatgatgtattaagcc 246  Q
    |||||||||||| ||| |||| ||||||||    
T  24495144 aagttaagggaccaaaggatgcattaagcc 24495173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 44113552 - 44113422
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    ||||||||||  || ||||||||| ||||||||| |||| ||||||| ||||||||||| |||||||||||||| |||| |||| | | |||||||||||    
T  44113552 aaaaactaacgaagtggaccaaaataggtaacggcagaatacataagggaccaatttgagacgttttttagttaagggatcattatgaaaaaaagaatta 44113453  T
Q  218 agttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||| | |||||  ||||||||||    
T  44113452 agttaagggaccatatgattaattaagccta 44113422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 49162360 - 49162230
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    ||||||||||  || ||||||||| ||| ||||| |||| ||||||| ||||||||| |||||||||||||||| | ||||||| | |||||||||||||    
T  49162360 aaaaactaacgaagtggaccaaaataggaaacggcagaatacataagggaccaattttaaacgttttttagttaagagaccattatgagaaaaagaatta 49162261  T
Q  218 agttaagggactaaatgatgtattaagccta 248  Q
    |||||||||| |  |||||  ||||||||||    
T  49162260 agttaagggattggatgatcaattaagccta 49162230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 246
Target Start/End: Complemental strand, 25153892 - 25153653
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaat 106  Q
    |||||| ||||||| ||||||||||||||||||| |||||||||| ||| ||| ||||| ||||||| ||||||| || ||| || |  |||| ||||||    
T  25153892 tggaaggaagaagaagaagaaagggaaaaaattaggtgttggtggttcagtgtggtacataatagacctgcaatcgaacggtcgaaaacatatcaaaaat 25153793  T
Q  107 attaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaag 206  Q
    |||||  ||||||||||  || || | ||||||||  |  ||||||||||||  || | |||||| |||| ||  ||| ||||||||||||||   | |     
T  25153792 attagatattaaaaaacacacggacaagaccaaaacggtaaacggaagaagatttatgggaccaaattgagacactttatagttaggggaccaaattgaa 25153693  T
Q  207 aaaaagaattaagttaagggactaaatgatgtattaagcc 246  Q
    ||    || ||||||||||||| |||||||||||||||||    
T  25153692 aatcgaaaataagttaagggaccaaatgatgtattaagcc 25153653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 248
Target Start/End: Original strand, 26407344 - 26407525
Alignment:
Q  67 aatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaac-taacagagaggaccaaaagaggtaacggaagaagacataaga 165  Q
    ||||||| ||||||| ||||||| | ||  ||| |||| |||||| ||| ||||||  ||||||||||||| |||| ||||||||  | |  ||||||||    
T  26407344 aatagacctgcaatcgaatggtttaaatcgtatcaaaattattagacataaaaaaaaataacagagaggactaaaataggtaacgacaaataacataaga 26407443  T
Q  166 gaccaatttgaaacgttttttagttaggggaccattctaagaaaaag-aattaagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||| ||||||||||||||| ||||||  ||  |||| || || || ||||||||||  ||||||||||||||||||    
T  26407444 gaccaatttgagacgttttttagttagaggaccaaact--gaaacagaaaatatgttaagggaccgaatgatgtattaagccta 26407525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 35483803 - 35483616
Alignment:
Q  14 aagaagatgaagaaagggaaaaaa--ttaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattag 111  Q
    |||||||||||||||   ||||||  |||| ||| ||||| ||| ||||||| || || ||| ||||||| || |||||| || | || |||||||||||    
T  35483803 aagaagatgaagaaaaacaaaaaagattaaatgtcggtggttcagtgttgtatacgatggacttgcaatcaaacggttgaaatcaaatcaaaaatattag 35483704  T
Q  112 gcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
     |||| ||| |||||| ||||||||| |||  |||||| |||||| ||| |||||||||| |||||||  ||| |||||| |||||||    
T  35483703 acatttaaatactaacggagaggaccgaaattggtaacagaagaatacacaagagaccaaattgaaacactttatagttaagggacca 35483616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 36673831 - 36673910
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| ||||||||||||||||||||||  |||||||||||| |||||| |||| || |||| ||||||||||||||    
T  36673831 aaactaactgagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacattttatagttaggggacca 36673910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 10257277 - 10257393
Alignment:
Q  14 aagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggc 113  Q
    |||||||||||||||   |||| ||||  ||||| ||| ||| ||||||||||  ||||| ||||||| || |||||| ||||||||||||||||||| |    
T  10257277 aagaagatgaagaaaaaaaaaagattagatgttgatggttcagtgttgtacacggtagacctgcaatcaaacggttgaaattatataaaaaatattagac 10257376  T
Q  114 attaaaaaactaacaga 130  Q
    |||| || |||||||||    
T  10257377 attagaatactaacaga 10257393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 13446540 - 13446672
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaat 106  Q
    |||||| | ||||||||||| ||| ||||||||| ||| || ||| ||| ||||||| | | | ||||||||||| ||||||||| || |||| | ||||    
T  13446540 tggaaggatgaagatgaagagaggaaaaaaattatgtggtgatggttcactgttgtatatattggacatgcaatcgaatggttgaaatcatatgagaaat 13446639  T
Q  107 attaggcattaaaaaactaacagagaggaccaa 139  Q
     |||  ||||||||||||||| |||||||||||    
T  13446640 gttacacattaaaaaactaacggagaggaccaa 13446672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 248
Target Start/End: Original strand, 44114627 - 44114778
Alignment:
Q  96 atataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttagggg 195  Q
    |||| |||||||| |  ||||||||||||||| |||||||||||||||||| || | |||||| ||||| ||||| ||||| |  |||| ||| ||||||    
T  44114627 atattaaaaatatgatacattaaaaaactaacggagaggaccaaaagaggtgacagtagaagatataagggaccagtttgagatattttatag-tagggg 44114725  T
Q  196 accattctaagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    ||||   | | ||  | || ||||||||||||| |||||||||||||||||||    
T  44114726 accaaaatgaaaactaaaaataagttaagggaccaaatgatgtattaagccta 44114778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 2904042 - 2904121
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| ||||||||||||||||||||||| ||||||||||| | || || |||| || |||| ||||||||||||||    
T  2904042 aaactaacggagaggaccaaaagaggtaacggcagaagacataacaaactaaattgagacattttatagttaggggacca 2904121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 30223971 - 30224050
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| ||||||||||||||| ||||||| |||||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  30223971 aaactaacggagaggaccaaaagatgtaacggcagaagacataagggaccaaattgagacaatttatagttaggggacca 30224050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 247
Target Start/End: Original strand, 18670475 - 18670625
Alignment:
Q  96 atataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttagggg 195  Q
    |||| ||||||||||  ||||||||||||||||||||||||| ||| || |||||  | || ||||||| ||||||||||| || ||||  ||||| |||    
T  18670475 atattaaaaatattatacattaaaaaactaacagagaggacc-aaatagataacgatataatacataagggaccaatttgagacattttaaagttaaggg 18670573  T
Q  196 accattctaagaaaaagaattaagttaagggactaaatgatgtattaagcct 247  Q
    ||||   ||| |   | || ||||||||||||| ||| ||||||||||||||    
T  18670574 accaaaataaaatccaaaaataagttaagggaccaaaggatgtattaagcct 18670625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 41126356 - 41126281
Alignment:
Q  124 taacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||| ||||||||||||||||||||||  |||||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  41126356 taacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagttaggggacca 41126281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 25532376 - 25532258
Alignment:
Q  9 gaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatat 108  Q
    ||||||||||||||||| |||| ||||||||| ||||||| ||  ||  |||  | | ||| ||| ||||||| ||||||||| || |||| ||||||||    
T  25532376 gaagaaagaagatgaaggaaggaaaaaaattacgtgttggcggtacaaggttaaatataatggacctgcaatcgaatggttgaaatcatatcaaaaatat 25532277  T
Q  109 taggcattaaaaaactaac 127  Q
    ||  |||||||||||||||    
T  25532276 taaacattaaaaaactaac 25532258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 38408250 - 38408348
Alignment:
Q  101 aaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    ||||||||||| |||  ||||||||||   ||||||||||| || |||||| |||||||||||| ||||||||||| ||  ||| ||||||| ||||||    
T  38408250 aaaaatattagacatccaaaaactaactttgaggaccaaaatagataacggcagaagacataagggaccaatttgagacactttatagttagaggacca 38408348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 30222767 - 30222711
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttga 176  Q
    |||||||| ||||||||||||||||||||||  |||||||||||| |||||| ||||    
T  30222767 aaactaacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattga 30222711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 8661763 - 8661696
Alignment:
Q  161 taagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggac 228  Q
    |||| ||||| ||||| |||||||||||||| |||||||||||   | ||||||||||||||||||||    
T  8661763 taagggaccactttgagacgttttttagttatgggaccattctggaacaaagaattaagttaagggac 8661696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 43704493 - 43704575
Alignment:
Q  166 gaccaatttgaaacgttttttagttaggggacca-ttctaagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    ||||| ||||||||||||  |||||||||||||| ||| || ||||| |||||||||||||||| |||||||  ||||||||||    
T  43704493 gaccattttgaaacgtttaatagttaggggaccaattcgaa-aaaaataattaagttaagggaccaaatgatcaattaagccta 43704575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 14107980 - 14107874
Alignment:
Q  93 attatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttag 192  Q
    ||||||| ||||||||||| ||| ||||||||||| |||||||||||||  |  ||||  |||||| ||||| ||||| ||||| ||  ||| ||||||     
T  14107980 attatattaaaaatattagacatcaaaaaactaacggagaggaccaaaacggtgaacgacagaagatataagggaccactttgagacactttatagttaa 14107881  T
Q  193 gggacca 199  Q
    |||||||    
T  14107880 gggacca 14107874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 14417937 - 14417831
Alignment:
Q  93 attatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttag 192  Q
    ||||||| ||||||||||| ||| ||||||||||| |||||||||||||  |  ||||  |||||| ||||| ||||| ||||| ||  ||| ||||||     
T  14417937 attatattaaaaatattagacatcaaaaaactaacggagaggaccaaaacggtgaacgacagaagatataagggaccactttgagacactttatagttaa 14417838  T
Q  193 gggacca 199  Q
    |||||||    
T  14417837 gggacca 14417831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 247
Target Start/End: Original strand, 36584946 - 36585027
Alignment:
Q  166 gaccaatttgaaacgttttttagttaggggacca-ttctaagaaaaagaattaagttaagggactaaatgatgtattaagcct 247  Q
    ||||| ||||||| ||||  |||||||||||||| ||| || |||||||||||||||||||||| |||||||  |||||||||    
T  36584946 gaccattttgaaatgtttaatagttaggggaccaattcgaa-aaaaagaattaagttaagggaccaaatgatcaattaagcct 36585027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 28326336 - 28326424
Alignment:
Q  71 gacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagac 159  Q
    ||||||||||| ||||||| | || |||| |||||  |||| ||||||||||||||| |||||||||| || ||  |||||| ||||||    
T  28326336 gacatgcaatcaaatggttaaaatcatattaaaaaatttagacattaaaaaactaacggagaggaccacaatagtaaacggaggaagac 28326424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 14206908 - 14206715
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaa--aaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaa 104  Q
    |||||| ||||||||||||| ||||||  ||||||| ||| || ||| ||| | ||||| | ||| ||| ||||||| ||||||||| ||||||| | ||    
T  14206908 tggaaggaagaagatgaagagagggaaggaaaattatgtggtgatggttcactattgtatataatggacctgcaatcgaatggttgaaattatatcagaa 14206809  T
Q  105 atattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    || |||   |||||||||||||| |||| || ||||| ||  ||||  ||||||  ||   |||||| ||||||| |||| |||||||| |||||    
T  14206808 atgtta-caattaaaaaactaacggagatgagcaaaatagtaaacgacagaagatttataggaccaaattgaaacattttatagttaggcgacca 14206715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 14215598 - 14215405
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaa--aaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaa 104  Q
    |||||| ||||||||||||| ||||||  ||||||| ||| || ||| ||| | ||||| | ||| ||| ||||||| ||||||||| ||||||| | ||    
T  14215598 tggaaggaagaagatgaagagagggaaggaaaattatgtggtgatggttcactattgtatataatggacctgcaatcgaatggttgaaattatatcagaa 14215499  T
Q  105 atattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    || |||   |||||||||||||| |||| || ||||| ||  ||||  ||||||  ||   |||||| ||||||| |||| |||||||| |||||    
T  14215498 atgtta-caattaaaaaactaacggagatgagcaaaatagtaaacgacagaagatttataggaccaaattgaaacattttatagttaggcgacca 14215405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 34558308 - 34558375
Alignment:
Q  132 aggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||||||||||||||| | |||||||||| |||||| |||| |   ||| ||||||||||||||    
T  34558308 aggaccaaaagaggtaacggcaaaagacataagggaccaaattgagatactttatagttaggggacca 34558375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 41618494 - 41618573
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| ||||||||||||||||||||||  |||||||||||  |||||| || | ||  ||| || |||||||||||    
T  41618494 aaactaacggagaggaccaaaagaggtaacgacagaagacataatggaccaaatttagacactttataattaggggacca 41618573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 47536911 - 47536969
Alignment:
Q  186 tagttaggggacca-ttctaagaaaaagaattaagttaagggactaaatgatgtattaag 244  Q
    |||||||||||||| ||| || |||||||||||||||||||||| ||| |||||||||||    
T  47536911 tagttaggggaccaattcgaa-aaaaagaattaagttaagggaccaaacgatgtattaag 47536969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 246
Target Start/End: Original strand, 40926610 - 40926640
Alignment:
Q  216 taagttaagggactaaatgatgtattaagcc 246  Q
    |||||||||||||||||||||||||||||||    
T  40926610 taagttaagggactaaatgatgtattaagcc 40926640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 43703134 - 43703045
Alignment:
Q  160 ataagagaccaatttgaaacgttttttagttaggggacca-ttctaagaaaaa-gaattaagttaagggactaaatgatgtattaagcct 247  Q
    |||| |||||| ||| |||| |||  |||||||||||||| ||| || ||||| ||||||||||||||||| |||||||  |||||||||    
T  43703134 ataaaagaccattttaaaacatttaatagttaggggaccaattcgaaaaaaaaagaattaagttaagggaccaaatgatcaattaagcct 43703045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 4973538 - 4973506
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    |||||||||||||||||| ||||||||||||||    
T  4973538 taagttaagggactaaataatgtattaagccta 4973506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 16955767 - 16955687
Alignment:
Q  166 gaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaagcc 246  Q
    |||||| |||||||||||  ||| ||||| |||| | | | |||||||||||||||||||||| | |||||  ||||||||    
T  16955767 gaccaaattgaaacgtttaatagctagggaaccaatttgaaaaaaagaattaagttaagggaccagatgatcaattaagcc 16955687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 35044688 - 35044632
Alignment:
Q  172 tttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggac 228  Q
    ||||||||||||  ||||||||| |||| | ||| | ||||||||||||||||||||    
T  35044688 tttgaaacgtttaatagttagggaaccaatttaaaataaagaattaagttaagggac 35044632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 36703042 - 36703074
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| |||||||||||||||||||    
T  36703042 taagttaagggaccaaatgatgtattaagccta 36703074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 43006410 - 43006378
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| |||||||||||||||||||    
T  43006410 taagttaagggaccaaatgatgtattaagccta 43006378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 4e-50; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 32 - 248
Target Start/End: Complemental strand, 26797528 - 26797312
Alignment:
Q  32 aaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagag 131  Q
    ||||||||| |||||| |||  |||||||||| ||||| ||| ||||||| ||||||||| ||||||| ||||||||||  ||||| ||||||||| |||    
T  26797528 aaaaaattaggtgttgatggtccattgttgtatacaatggacctgcaatcaaatggttgaaattatatcaaaaatattaatcattagaaaactaacggag 26797429  T
Q  132 aggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaa 231  Q
    ||| |||| | ||||||||| | || |||||||  |||||||||| |||||||||||||||| ||| ||| | | |||||||| ||||||||||||||||    
T  26797428 agggccaagataggtaacggcataatacataaggaaccaatttgagacgttttttagttaggtgactattgtgaaaaaaagaaataagttaagggactaa 26797329  T
Q  232 atgatgtattaagccta 248  Q
    |||||||||||||||||    
T  26797328 atgatgtattaagccta 26797312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 248
Target Start/End: Complemental strand, 7483246 - 7483103
Alignment:
Q  104 aatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattct 203  Q
    |||||||| || ||||||||||||| |||||||||||||||||||||  | |||||||||||||||||||||| ||||||||||| ||||||||||| ||    
T  7483246 aatattagtcaataaaaaactaacatagaggaccaaaagaggtaacgacaaaagacataagagaccaatttgagacgttttttag-taggggaccatact 7483148  T
Q  204 aagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
     |||||||||||||||||||||||| ||   ||||||||||||||    
T  7483147 gagaaaaagaattaagttaagggaccaacgaatgtattaagccta 7483103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 7483518 - 7483649
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattct--aagaaaaagaat 215  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||| ||  || |||||||||    
T  7483518 aaaaactaacggagatgaccaaaagaggtaacggaagaagacataagggaccaatttaagacgttttttagttaggggaccatactgaaaaaaaaagaat 7483617  T
Q  216 taagttaagggactaaatgatgtattaagcct 247  Q
    ||||||||||||| ||  ||| ||||||||||    
T  7483618 taagttaagggaccaacggatatattaagcct 7483649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 42 - 246
Target Start/End: Complemental strand, 17345509 - 17345306
Alignment:
Q  42 gtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaa 141  Q
    |||||||||| | ||||||||| ||||||||||||||||| ||||||| | || |||| ||||||||||| ||||||||||||||| |||||||||||||    
T  17345509 gtgttggtggtttattgttgtatacaatagacatgcaatcgaatggttcaaatcatattaaaaatattagacattaaaaaactaacggagaggaccaaaa 17345410  T
Q  142 gaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtatt 241  Q
     ||||||| ||||||||  ||||  ||||| |||| |   ||||||||||||||||||  || | ||  | || ||||||||||||| |||| |||||||    
T  17345409 -aggtaacagaagaagatttaaggaaccaaattgagatactttttagttaggggaccaacctgaaaaccaaaaataagttaagggaccaaataatgtatt 17345311  T
Q  242 aagcc 246  Q
    |||||    
T  17345310 aagcc 17345306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 31638241 - 31638109
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgtttttt--agttaggggaccattctaagaaaaagaat 215  Q
    |||||||| | ||||||| |||||||||||||  |||||||||||||  |||||||||| |||||||||  ||| ||||||||||| | | |||||||||    
T  31638241 aaaaactagcggagaggatcaaaagaggtaacataagaagacataaggaaccaatttgagacgttttttttagtgaggggaccattttgaaaaaaagaat 31638142  T
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| ||| |||||||||||||||    
T  31638141 taagttaagggaccaaacgatgtattaagccta 31638109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 118 - 248
Target Start/End: Original strand, 34902987 - 34903116
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgtttttt-agttaggggaccattctaagaaaaagaatt 216  Q
    |||||||||| |||| ||||||||||| |||||  |||| |||||||||||||| |||||||||||||| ||||| ||||||||| | | ||||| ||||    
T  34902987 aaaaactaacggagatgaccaaaagag-taacgacagaaaacataagagaccaaattgaaacgtttttttagttaagggaccattttgaaaaaaa-aatt 34903084  T
Q  217 aagttaagggactaaatgatgtattaagccta 248  Q
    || |||||||||||||||||||||||||||||    
T  34903085 aaattaagggactaaatgatgtattaagccta 34903116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 53809433 - 53809616
Alignment:
Q  65 acaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataag 164  Q
    ||||||||||||||||| ||||||| | ||||||| |||||  |||| ||||||||||||||| |||| ||| | |  ||  |||||| ||| || || |    
T  53809433 acaatagacatgcaatcaaatggttaaaattatatcaaaaaatttagacattaaaaaactaacggagatgacaacattagtaaacggaggaaaacttatg 53809532  T
Q  165 agaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    |||| || |||| |||||||  |||||||||||||   | | || || || |||||||||||||||||||||||||||||||||    
T  53809533 agacaaaattgagacgttttaaagttaggggaccaaaatgaaaacaaaaaataagttaagggactaaatgatgtattaagccta 53809616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 199
Target Start/End: Complemental strand, 39133140 - 39133059
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||||||||||||||||||||||||||||  |||||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  39133140 aaaaactaacagagaggaccaaaagaggtaacgagagaagacataagggaccaaattgagacactttatagttaggggacca 39133059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 17350095 - 17350223
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    |||||||||| ||||||||||||||||||||| | |||||||||||| |||||| |||| ||  ||| ||||||||||| ||   | | ||  | || ||    
T  17350095 aaaaactaacggagaggaccaaaagaggtaacaggagaagacataagggaccaaattgagacactttatagttaggggaacaaattgaaaaccaaaaata 17350194  T
Q  218 agttaagggactaaatgatgtattaagcc 246  Q
    ||||||||||| |||||||||||||||||    
T  17350195 agttaagggaccaaatgatgtattaagcc 17350223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 176
Target Start/End: Original strand, 7921595 - 7921694
Alignment:
Q  77 caatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttga 176  Q
    ||||| ||||||||| || |||| ||||||||||| ||||||||||||||| ||||||| ||||| ||||||||  | || ||||||| |||||||||||    
T  7921595 caatcgaatggttgaaatcatatcaaaaatattagacattaaaaaactaacggagaggatcaaaataggtaacgacacaatacataagggaccaatttga 7921694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 11220540 - 11220674
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaat 106  Q
    |||||| ||||||||||||||||||||||||||| ||| || ||| ||| |  |||| | ||| ||| ||||||  ||||||||| ||||||| | ||||    
T  11220540 tggaaggaagaagatgaagaaagggaaaaaattatgtggtgatggttcactactgtatataatggacctgcaatataatggttgaaattatatcataaat 11220639  T
Q  107 attaggcattaaaaaactaacagagaggaccaaaa 141  Q
    ||| | ||||||||||| ||| ||| |||||||||    
T  11220640 atttgacattaaaaaacaaacggaggggaccaaaa 11220674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 25583237 - 25583109
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    ||||| |||||||||||||||||| ||  ||||| ||||||| || | |||||| |||| ||||||  ||||||||||||||   | | ||  | || ||    
T  25583237 aaaaattaacagagaggaccaaaatagtaaacggcagaagacttatgggaccaaattgagacgtttaatagttaggggaccaaagtgaaaatcaaaaata 25583138  T
Q  218 agttaagggactaaatgatgtattaagcc 246  Q
    |||||||||||||||||||||||||||||    
T  25583137 agttaagggactaaatgatgtattaagcc 25583109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 32973260 - 32973181
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| |||||||| |||||||||||||| |||||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  32973260 aaactaacggagaggacaaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttaggggacca 32973181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 53049032 - 53049111
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| ||||||||||||||||||||||  |||||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  53049032 aaactaacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagttaggggacca 53049111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 25585722 - 25585907
Alignment:
Q  14 aagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggc 113  Q
    ||||||||||||| ||||||||||||| ||| || ||| ||| | ||||| | ||| ||  ||||||| ||||||| | || |||| | |||| |||| |    
T  25585722 aagaagatgaagagagggaaaaaattatgtggtgatggttcactattgtatataatggatctgcaatcgaatggttcaaatcatatcagaaatgttagac 25585821  T
Q  114 attaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||||||||| |||| ||| |||| ||  ||||  ||||||  || |||||||| |||| ||||||  ||||||| ||||||    
T  25585822 attaaaaaactaacggagatgactaaaatagtaaacgacagaagatttatgagaccaaattgagacgtttaatagttagaggacca 25585907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 32980326 - 32980526
Alignment:
Q  1 aagcgatggaagaaagaagatgaagaaagggaaaaaa--ttaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattata 98  Q
    ||||| |||||| || |||||||||| ||||||||||  ||| ||| || ||| ||| | ||||| | ||| ||| ||||||| ||||||||| || |||    
T  32980326 aagcggtggaaggaaaaagatgaagagagggaaaaaaaattatgtggtgatggttcactattgtatataatggacctgcaatcgaatggttgaaatcata 32980425  T
Q  99 taaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacc 198  Q
    | |||||| ||||  |||||||||||||| |||| |||||||| ||  ||||| ||||||  ||   |||||| |||| ||  ||| |||||||||||||    
T  32980426 tcaaaaatgttagaaattaaaaaactaacggagatgaccaaaatagtaaacggcagaagatttataggaccaaattgagacactttgtagttaggggacc 32980525  T
Q  199 a 199  Q
    |    
T  32980526 a 32980526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 228
Target Start/End: Original strand, 27234688 - 27234800
Alignment:
Q  117 aaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaac-gttttttagttaggggaccattctaagaaaaagaat 215  Q
    ||||||||||| | ||||||||||| ||||||||| |||| |||| || ||||| ||||| ||  |||||||||||  |||||||| | | | |||||||    
T  27234688 aaaaaactaacggcgaggaccaaaataggtaacggcagaatacatgagggaccagtttgagacatttttttagttaaaggaccattgtgaaataaagaat 27234787  T
Q  216 taagttaagggac 228  Q
    |||||||||||||    
T  27234788 taagttaagggac 27234800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 246
Target Start/End: Complemental strand, 33149577 - 33149477
Alignment:
Q  146 taacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaagc 245  Q
    ||||||||| ||| ||||  |||||| |||| |||||||  ||||| ||||||||| ||| ||||||||||||||||||||| ||| ||||  |||||||    
T  33149577 taacggaagtagagataatggaccaaattgagacgttttaaagttatgggaccattttaaaaaaaagaattaagttaagggattaagtgatcaattaagc 33149478  T
Q  246 c 246  Q
    |    
T  33149477 c 33149477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 32974222 - 32974297
Alignment:
Q  124 taacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||| |||| |||||||||||||||||| |||||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  32974222 taacggagatgaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttaggggacca 32974297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 141
Target Start/End: Complemental strand, 35173354 - 35173247
Alignment:
Q  34 aaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagag 133  Q
    |||||||  ||||||||| ||| ||||||||||  ||||| ||||||| || |||||| |||||||||||| |||||| ||||| || ||||| ||| |     
T  35173354 aaaattagatgttggtggttcagtgttgtacacggtagacctgcaatcaaacggttgaaattatataaaaattattagacattagaatactaatagaaat 35173255  T
Q  134 gaccaaaa 141  Q
    ||||||||    
T  35173254 gaccaaaa 35173247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 48035323 - 48035398
Alignment:
Q  124 taacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||| ||||||||||||||||||||||| | |||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  48035323 taacggagaggaccaaaagaggtaacggcataagacataagggaccaaattgagacactttatagttaggggacca 48035398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 52293518 - 52293597
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| ||||||||||||||||||||||  |||||||||||  |||||| |||| ||  ||| ||||||||||||||    
T  52293518 aaactaacggagaggaccaaaagaggtaacgatagaagacataaaggaccaaattgagacactttatagttaggggacca 52293597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 53048014 - 53047939
Alignment:
Q  124 taacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||| ||||||||||||||||||||||  |||||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  53048014 taacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagttaggggacca 53047939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 21247317 - 21247232
Alignment:
Q  160 ataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaagc 245  Q
    ||||| ||||| ||||||||||||  |||||||||||||| | | | | |||||||||||||||||||| |||||||  |||||||    
T  21247317 ataagggaccattttgaaacgtttaatagttaggggaccaatttgaaataaagaattaagttaagggaccaaatgatcaattaagc 21247232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 248
Target Start/End: Original strand, 19622890 - 19623042
Alignment:
Q  96 atataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttagggg 195  Q
    |||| ||||||||||| ||| |||||| |||| | || |||||||| || |||||  |||||||||||| ||||| ||||| ||  ||| |||||||| |    
T  19622890 atattaaaaatattagacatcaaaaaattaactgcgatgaccaaaatagataacgacagaagacataagggaccagtttgagacactttatagttaggag 19622989  T
Q  196 accattctaagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    ||||   | | || || || ||||||||||||  || ||||||||||||||||    
T  19622990 accaaagtgaaaacaaaaaataagttaagggagcaagtgatgtattaagccta 19623042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 1301149 - 1301074
Alignment:
Q  124 taacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    ||||||| |||||||||||||||||||| | |||||||||| |||||| |||| ||  ||| |||||| |||||||    
T  1301149 taacagataggaccaaaagaggtaacggtaaaagacataagggaccaaattgagacactttatagttatgggacca 1301074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 39287591 - 39287512
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| ||||||||||||||||||||||  |||| ||||||| |||||| |||| ||  ||| ||||||| ||||||    
T  39287591 aaactaacggagaggaccaaaagaggtaacgacagaaaacataagggaccaaattgagacactttatagttagaggacca 39287512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 786454 - 786564
Alignment:
Q  137 caaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgat 236  Q
    ||||| || |||||| |||| ||||||| |||||  |||| | |||||||||||| |||| |||| | | | |||||||||||||||||| || ||||||    
T  786454 caaaatagataacggcagaatacataagggaccacattgagaagttttttagttaagggatcattatgaaataaagaattaagttaaggggctgaatgat 786553  T
Q  237 gtattaagcct 247  Q
      |||||||||    
T  786554 taattaagcct 786564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 5416306 - 5416240
Alignment:
Q  133 ggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    ||||||||||||||||||  | |||||||||| |||||| |||| || |||| ||||||||||||||    
T  5416306 ggaccaaaagaggtaacgacaaaagacataagggaccaaattgagacattttatagttaggggacca 5416240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 247
Target Start/End: Original strand, 50003264 - 50003345
Alignment:
Q  166 gaccaatttgaaacgttttttagttaggggacca-ttctaagaaaaagaattaagttaagggactaaatgatgtattaagcct 247  Q
    ||||| ||||||||||||  |||||||||||||| ||| || | |||||||||||||||||||| |||||||  |||||||||    
T  50003264 gaccattttgaaacgtttaatagttaggggaccaattcgaa-ataaagaattaagttaagggaccaaatgatcaattaagcct 50003345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 5411320 - 5411361
Alignment:
Q  207 aaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  5411320 aaaaagaattaagttaagggaccaaacgatgtattaagccta 5411361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 7583577 - 7583512
Alignment:
Q  134 gaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||||||||||||| | ||||||||||||||||| |||| ||  ||| ||||||| ||||||    
T  7583577 gaccaaaagaggtaacggtaaaagacataagagaccaaattgagacactttatagttagtggacca 7583512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 43345493 - 43345333
Alignment:
Q  67 aatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagag 166  Q
    ||||||| ||||||| ||||||||  || |||| ||||||||||  ||||||||||||||| ||||  |||||||  |  ||||  ||||||  || | |    
T  43345493 aatagacctgcaatcgaatggttggaatcatatcaaaaatattaaacattaaaaaactaacggagaaaaccaaaatggtaaacgagagaagatttatggg 43345394  T
Q  167 accaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaaggga 227  Q
    ||||| ||||||| |||| |||||| ||||||   || ||||||  || ||||||||||||    
T  43345393 accaaattgaaacattttatagttaagggacctaactgagaaaataaaataagttaaggga 43345333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 45422072 - 45422176
Alignment:
Q  32 aaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagag 131  Q
    ||||||| | |||||||||| |||  |||  | ||||||||| ||||||| ||||||| | || |||| || |||||||| |||||||||||||| |||     
T  45422072 aaaaaatcaggtgttggtggttcacggtttgatacaatagacctgcaatcaaatggttaatatcatatcaagaatattagacattaaaaaactaatagaa 45422171  T
Q  132 aggac 136  Q
    |||||    
T  45422172 aggac 45422176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 8372566 - 8372632
Alignment:
Q  75 tgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaa 141  Q
    ||||||| ||||||||| || |||| ||||||||||  ||||||||||||||| |||  ||||||||    
T  8372566 tgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaactaacggaggtgaccaaaa 8372632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 19252897 - 19253018
Alignment:
Q  22 gaagaaagggaaaaaa--ttaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaa 119  Q
    ||||||||||||||||  ||| |||||||||| ||| ||  ||| | ||| ||| ||||||| ||||||  | |  |||||||||||||||| |||||||    
T  19252897 gaagaaagggaaaaaaaattaggtgttggtggttcaatgcggtatataatggacttgcaatcaaatggtcaaaacaatataaaaaatattagacattaaa 19252996  T
Q  120 aaactaacagagaggaccaaaa 141  Q
    |||  ||| || ||||||||||    
T  19252997 aaataaacggacaggaccaaaa 19253018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 38639158 - 38639060
Alignment:
Q  101 aaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||||||  || ||||||||||| | ||||||||||| ||  ||||   |||||||||||||||||| | |||||  ||| |||||| |||||||    
T  38639158 aaaaatattagatatcaaaaaactaactgcgaggaccaaaatagagaacgacggaagacataagagaccaaatcgaaacactttatagttaagggacca 38639060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 194
Target Start/End: Complemental strand, 48825933 - 48825859
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggg 194  Q
    |||||||| ||||| |||||| |||||||||  |||||||||||| |||||| |||| ||  ||| |||||||||    
T  48825933 aaactaactgagagtaccaaatgaggtaacgacagaagacataagggaccaaattgagacactttatagttaggg 48825859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 55443558 - 55443624
Alignment:
Q  133 ggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    ||||||||||||||||||  | |||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  55443558 ggaccaaaagaggtaacgacaaaagacataagggaccaaattgagacactttatagttaggggacca 55443624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 5409371 - 5409330
Alignment:
Q  207 aaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||||||||||||| ||||||  ||||||||||    
T  5409371 aaaaagaattaagttaagggactgaatgatcaattaagccta 5409330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 27226621 - 27226662
Alignment:
Q  207 aaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    |||||||||||||||||||||| |||||||  ||||||||||    
T  27226621 aaaaagaattaagttaagggaccaaatgatcaattaagccta 27226662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 40501915 - 40501850
Alignment:
Q  134 gaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||||||||||||| | |||||||||| |||||| |||| |  |||| |||||||| |||||    
T  40501915 gaccaaaagaggtaacggcaaaagacataagggaccaaattgagatattttatagttaggtgacca 40501850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 11482010 - 11481966
Alignment:
Q  132 aggaccaaaagaggtaacggaagaagacataagagaccaatttga 176  Q
    |||||||||||||||||||| | |||||||||| |||||| ||||    
T  11482010 aggaccaaaagaggtaacggcaaaagacataagggaccaaattga 11481966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 248
Target Start/End: Complemental strand, 48253109 - 48252926
Alignment:
Q  65 acaatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataag 164  Q
    ||||| ||||||||||| ||||||| | || | || |||||  |||| ||||||||||||||| |||| ||| | |  ||  |||||| |||||| || |    
T  48253109 acaatggacatgcaatcaaatggttaaaatcacatcaaaaaatttagacattaaaaaactaacggagatgactacattagtaaacggaggaagacttatg 48253010  T
Q  165 agaccaatttgaaacgttttttagttaggggaccattctaagaa-aaagaattaagttaagggactaaatgatgtattaagccta 248  Q
     |||||| |||| ||  ||| ||||||||||||||   ||| || |||||| ||||||||||||| |||  ||| ||||||||||    
T  48253009 ggaccaaattgagacactttatagttaggggaccaaaataaaaacaaagaa-taagttaagggaccaaagcatgcattaagccta 48252926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 48338208 - 48338240
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| |||||||||||||||||||    
T  48338208 taagttaagggaccaaatgatgtattaagccta 48338240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 7 - 248
Target Start/End: Complemental strand, 11940 - 11699
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaat 106  Q
    |||||| ||||||||| ||||||||||||| ||  |||||||||| ||||||||||| |||||| |||||||||| ||||||| | || | || ||||||    
T  11940 tggaaggaagaagatggagaaagggaaaaattttggtgttggtggttcattgttgtatacaataaacatgcaatcgaatggttaaaatcacatcaaaaat 11841  T
Q  107 attaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaag 206  Q
    ||||| ||||||||||||||| ||||||||||||| ||||||| | |||||||||||| |||||| |||||||  ||| || ||||||||| |  || |     
T  11840 attagacattaaaaaactaacggagaggaccaaaataggtaactggagaagacataagggaccaaattgaaacactttataattaggggactaaactgaa 11741  T
Q  207 aaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    || || || ||||||||||||| ||| ||||||||| |||||    
T  11740 aataaaaaataagttaagggaccaaacgatgtattacgccta 11699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 13211 - 13278
Alignment:
Q  132 aggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||||||||||||||||||||||  || | ||| || |||| || |||| ||||||||||||||    
T  13211 aggaccaaaagaggtaacggaagaagagttatgggacgaaattgagacattttatagttaggggacca 13278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 18773891 - 18773696
Alignment:
Q  5 gatggaagaaagaagatgaagaaagggaaaaaat-taagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaa 103  Q
    |||||||| ||||||||||||||||||||||||  |  |||||||||| ||||||||||| ||||||||||||||||| ||||||| | || |||| |||    
T  18773891 gatggaaggaagaagatgaagaaagggaaaaaaacttggtgttggtggttcattgttgtatacaatagacatgcaatcgaatggttaaaatcatatcaaa 18773792  T
Q  104 aatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    || || || ||||||||||||||||||||||||||||| |||||||   ||| |||||||| |||||| |||| || |||| || |||||||||||    
T  18773791 aacatcagacattaaaaaactaacagagaggaccaaaaaaggtaacacgagaggacataagggaccaaattgagacattttataattaggggacca 18773696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 229
Target Start/End: Complemental strand, 13279520 - 13279369
Alignment:
Q  77 caatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttga 176  Q
    ||||| || |||||| || |||||||||| ||||| |||||||||||||||||||| |||| ||| || | | | ||||| ||||||| ||||| |||||    
T  13279520 caatcaaacggttgaaatcatataaaaaa-attagacattaaaaaactaacagagatgaccgaaatagatcatgaaagaatacataagggaccagtttga 13279422  T
Q  177 aacgttttttagttaggggaccattctaagaaaaagaattaagttaagggact 229  Q
     ||  || ||||||| ||||||||| | ||| |||||||||||||||||||||    
T  13279421 gacaattcttagttaagggaccattatgagacaaagaattaagttaagggact 13279369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 2138632 - 2138711
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||||||||||||||||||||||||||  |||||||||||| ||| || |||| ||  ||| ||||||||||||||    
T  2138632 aaactaacagagaggaccaaaagaggtaacgacagaagacataagggactaaattgagacactttatagttaggggacca 2138711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 19368513 - 19368592
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| |||||||| |||||||||||||  ||||||||||||||||||| |||| ||  ||| ||||||| ||||||    
T  19368513 aaactaacggagaggactaaaagaggtaacgacagaagacataagagaccaaattgagacactttatagttagaggacca 19368592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 8447330 - 8447263
Alignment:
Q  132 aggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||||||||||||||| | |||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  8447330 aggaccaaaagaggtaacggcaaaagacataagggaccaaattgagacactttatagttaggggacca 8447263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 8456134 - 8456067
Alignment:
Q  132 aggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||||||||||||||| | |||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  8456134 aggaccaaaagaggtaacggcaaaagacataagggaccaaattgagacactttatagttaggggacca 8456067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 24547100 - 24547183
Alignment:
Q  160 ataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaa 243  Q
    ||||| || ||| |||| |||||||  ||||| | ||||||| | | |||||||||||||||||||||| ||||||||||||||    
T  24547100 ataagggatcaaattgagacgttttaaagttatgagaccattttgaaaaaaagaattaagttaagggaccaaatgatgtattaa 24547183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 31740153 - 31740288
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaaaaaa-ttaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaa 105  Q
    |||||| ||||||||||||||||  |||||| ||| ||| |||||| ||||||| ||| | ||| ||| ||||||| |||| |    || ||| ||||||    
T  31740153 tggaaggaagaagatgaagaaagaaaaaaaaattaggtgctggtggttcattgtagtatataatggacctgcaatcaaatgctcacaataatacaaaaaa 31740252  T
Q  106 tattaggcattaaaaaactaacagagaggaccaaaa 141  Q
    |||||| ||||||||||| ||| || ||||||||||    
T  31740253 tattagacattaaaaaacaaacggataggaccaaaa 31740288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 34083285 - 34083159
Alignment:
Q  14 aagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggc 113  Q
    ||||||||||||| ||||||||||||| ||| || ||| ||| | ||||| | ||| ||| ||||||| ||||||||| ||||||| | |||| |||  |    
T  34083285 aagaagatgaagagagggaaaaaattatgtggtgatggttcactattgtatataatggacctgcaatcgaatggttgaaattatatcagaaatgttacac 34083186  T
Q  114 attaaaaaactaacagagaggaccaaaa 141  Q
    ||| | ||||||||||| |||| |||||    
T  34083185 att-agaaactaacagaaaggatcaaaa 34083159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 10673684 - 10673622
Alignment:
Q  166 gaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggac 228  Q
    |||||| ||||||||||| ||||||| ||||||| |  || ||||||||||||||||||||||    
T  10673684 gaccaaattgaaacgtttattagttaagggaccaattcaaaaaaaagaattaagttaagggac 10673622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 13176342 - 13176405
Alignment:
Q  134 gaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggac 197  Q
    |||||||||||||||||  | ||||||||| ||||||| |||| || |||| ||||||||||||    
T  13176342 gaccaaaagaggtaacgacaaaagacataaaagaccaaattgagacattttatagttaggggac 13176405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 4030222 - 4030140
Alignment:
Q  166 gaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    |||||| |||| |||||||  ||||| ||||||||| | | |||| ||||||| |||| |||| ||| |||||||||||||||    
T  4030222 gaccaaattgagacgttttaaagttatgggaccattttgaaaaaaggaattaaattaaaggaccaaacgatgtattaagccta 4030140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 241
Target Start/End: Complemental strand, 24317084 - 24317050
Alignment:
Q  207 aaaaagaattaagttaagggactaaatgatgtatt 241  Q
    |||||||||||||||||||||| ||||||||||||    
T  24317084 aaaaagaattaagttaagggaccaaatgatgtatt 24317050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 247
Target Start/End: Original strand, 13562337 - 13562418
Alignment:
Q  166 gaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaagcct 247  Q
    ||||| ||||||||||||  |||||| ||||||| | | | ||||| |||||||||||||| | |||||||  |||||||||    
T  13562337 gaccattttgaaacgtttaatagttaagggaccaatttgaaaaaaataattaagttaaggggccaaatgattaattaagcct 13562418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 26584046 - 26584111
Alignment:
Q  134 gaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||||||||||||| | ||||||||||  ||||| |||| ||  ||| ||||||||||||||    
T  26584046 gaccaaaagaggtaacggcaaaagacataaggaaccaaattgagacactttatagttaggggacca 26584111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 227
Target Start/End: Original strand, 28931135 - 28931216
Alignment:
Q  146 taacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaaggga 227  Q
    ||||||||| ||| ||||| |||||| |||| |||||||  |||||  |||||||  | | |||||||||||||||||||||    
T  28931135 taacggaagtagaaataagggaccaaattgagacgttttaaagttataggaccatattgaaaaaaagaattaagttaaggga 28931216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 248
Target Start/End: Original strand, 4030898 - 4030985
Alignment:
Q  160 ataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    ||||| |||||| |||| |||||||  ||||| | ||||||| | | |||||||||||| ||||||||| ||| ||||||| |||||||    
T  4030898 ataagggaccaaattgagacgttttaaagttatgagaccattttga-aaaaagaattaaattaagggaccaaacgatgtatcaagccta 4030985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 15435717 - 15435685
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| |||||||||||||||||||    
T  15435717 taagttaagggaccaaatgatgtattaagccta 15435685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 24318146 - 24318186
Alignment:
Q  207 aaaaagaattaagttaagggactaaatgatgtattaagcct 247  Q
    |||||||||||||||||||||| |||||||  |||||||||    
T  24318146 aaaaagaattaagttaagggaccaaatgatcaattaagcct 24318186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 14210266 - 14210138
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatta 217  Q
    |||||||||||||||||| ||||| ||||||||| ||||    |||| ||||||||||| |||||||||||||| ||||||||| | | |||||||||||    
T  14210266 aaaaactaacagagaggatcaaaataggtaacggcagaatgtctaagggaccaatttgagacgttttttagttatgggaccattgtgaaaaaaagaatta 14210167  T
Q  218 agttaagggactaaatgatgtattaagcc 246  Q
    ||||||||||| | |||||  ||||||||    
T  14210166 agttaagggaccagatgatcaattaagcc 14210138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 248
Target Start/End: Complemental strand, 12861689 - 12861542
Alignment:
Q  101 aaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccat 200  Q
    |||||||||||  ||||||| ||||||||||||||||  || | ||||| |||||| ||||||| ||||||||||| |||||| ||||||| |||||||     
T  12861689 aaaaatattagatattaaaatactaacagagaggaccgcaataagtaacagaagaatacataagggaccaatttgagacgtttcttagttaagggaccaa 12861590  T
Q  201 tctaagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
     || ||||||  || ||||||||||||| | | |||||||||||||||    
T  12861589 actgagaaaataaaataagttaagggacgagaggatgtattaagccta 12861542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 32735367 - 32735495
Alignment:
Q  13 aaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattagg 112  Q
    ||||||||||||||||   || | ||||  ||||||||| ||| ||||||||||| ||||| ||||||| ||  ||||| |||||||||||||||||||     
T  32735367 aaagaagatgaagaaaataaatagattagatgttggtggttcagtgttgtacacagtagacctgcaatcaaactgttgaaattatataaaaaatattaga 32735466  T
Q  113 cattaaaaaactaacagagaggaccaaaa 141  Q
    |||||||| ||||||||||| ||||||||    
T  32735467 cattaaaatactaacagagatgaccaaaa 32735495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 248
Target Start/End: Complemental strand, 12829710 - 12829563
Alignment:
Q  101 aaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccat 200  Q
    |||||||||||  ||||||| ||||||||||||||||  || | ||||| |||||| ||||||| ||||||||||| |||||| ||||||| |||||||     
T  12829710 aaaaatattagatattaaaatactaacagagaggaccgcaataagtaacagaagaatacataagggaccaatttgagacgtttcttagttaagggaccaa 12829611  T
Q  201 tctaagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
     || | ||||  || ||||||||||||| | | |||||||||||||||    
T  12829610 actgaaaaaataaaataagttaagggacgagaggatgtattaagccta 12829563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 247
Target Start/End: Complemental strand, 41905320 - 41905169
Alignment:
Q  96 atataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttagggg 195  Q
    |||| |||||||| |  ||||||||||||||| ||||||| |||||||||| |||| |||||||||||| ||||| ||| | || |||| ||||||||||    
T  41905320 atattaaaaatatgatacattaaaaaactaacggagaggatcaaaagaggtgacggtagaagacataagggaccagtttaagacattttatagttagggg 41905221  T
Q  196 accattctaagaaaaagaattaagttaagggactaaatgatgtattaagcct 247  Q
    ||||   | | ||  | || ||||||||||||| ||||||||||||||||||    
T  41905220 accaaaatgaaaaccaaaaataagttaagggaccaaatgatgtattaagcct 41905169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 118 - 248
Target Start/End: Original strand, 41906391 - 41906522
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattct-aagaaaaagaatt 216  Q
    ||||||||||  || ||||||||| ||||||||| |||| | ||||| | ||||||||| |||||||||||||| ||||||||| | || ||||||||||    
T  41906391 aaaaactaacgaagtggaccaaaataggtaacggcagaatatataaggggccaatttgagacgttttttagttaagggaccattataaaaaaaaagaatt 41906490  T
Q  217 aagttaagggactaaatgatgtattaagccta 248  Q
    |||||||||||| | |||||  ||||||||||    
T  41906491 aagttaagggaccatatgattaattaagccta 41906522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 15510258 - 15510334
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttagggga 196  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||| |||| ||  ||| |||||||||||    
T  15510258 aaactaacagagaggaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttagggga 15510334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 19524218 - 19524082
Alignment:
Q  5 gatggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaa 104  Q
    |||||||| |||||||||||||||||||||||||||  ||||||||| ||| ||| ||| ||||| ||| ||||||| ||||||  | |  |||| ||||    
T  19524218 gatggaaggaagaagatgaagaaagggaaaaaattagatgttggtggttcagtgtggtatacaatggacctgcaatcgaatggtcaaaacaatatcaaaa 19524119  T
Q  105 atattaggcattaaaaaactaacagagaggaccaaaa 141  Q
     |||||| ||||||||||| ||| || | ||||||||    
T  19524118 ttattagacattaaaaaacaaacggacatgaccaaaa 19524082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 77 - 196
Target Start/End: Original strand, 5384298 - 5384417
Alignment:
Q  77 caatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttga 176  Q
    ||||| ||||||||| ||||||| ||||||||||  ||||||||||||||| ||||||||||||| ||  |||||| |||||  || | |||||| ||||    
T  5384298 caatcgaatggttgaaattatatcaaaaatattaaacattaaaaaactaacggagaggaccaaaatagtaaacggacgaagatttatgggaccaaattga 5384397  T
Q  177 aacgttttttagttagggga 196  Q
     ||  ||| |||||||||||    
T  5384398 gacactttatagttagggga 5384417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 20988811 - 20988732
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| ||||||||||||||||||||||| | |||||||||||||| || |||| ||  ||| ||||||||||||||    
T  20988811 aaactaacggagaggaccaaaagaggtaacggcacaagacataagagactaaattgagacactttatagttaggggacca 20988732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 199
Target Start/End: Complemental strand, 21387760 - 21387679
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    ||||||||||||| |||||||||||||||||||| ||||||  || | |||||| |||| || |||| ||||||||||||||    
T  21387760 aaaaactaacagacaggaccaaaagaggtaacggcagaagatttatgggaccaaattgagacattttatagttaggggacca 21387679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 4567072 - 4566996
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttagggga 196  Q
    ||||||||||||| |||||||||||||||||  |||||||||||| |||||| |||| ||  ||| |||||||||||    
T  4567072 aaactaacagagatgaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagttagggga 4566996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 5975926 - 5975754
Alignment:
Q  71 gacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagacca 170  Q
    ||||||||||| ||||||| | || |||| |||||  |||| ||||||||||||||||||||| |||| || ||  ||| || |||||| || |||||||    
T  5975926 gacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagtaaacagaggaagacttatgagacca 5975827  T
Q  171 atttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaa 243  Q
    | |||| ||  ||| || |||||||||||   | | || || || |||||||| |||| ||||||||||||||    
T  5975826 aattgagacactttataattaggggaccaaaattaaaataaaaaataagttaaaggaccaaatgatgtattaa 5975754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 14212141 - 14212256
Alignment:
Q  75 tgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaattt 174  Q
    ||||||| ||||||||| |||| |||||||||||||| |||||| ||| ||||  ||||||| |||| ||||||||  | || ||||||| || ||||||    
T  14212141 tgcaatcgaatggttgaaattacataaaaaatattagccattaagaaattaacgaagaggactaaaataggtaacgatataatacataaggga-caattt 14212239  T
Q  175 gaaacgttttttagtta 191  Q
    || || |||||||||||    
T  14212240 gagacattttttagtta 14212256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 15509312 - 15509237
Alignment:
Q  124 taacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||| ||||||||||||| ||||||||| |||||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  15509312 taacggagaggaccaaaataggtaacggcagaagacataagggaccaaattgagacactttatagttaggggacca 15509237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 42962098 - 42962017
Alignment:
Q  166 gaccaatttgaaacgttttttagttaggggacca-ttctaagaaaaagaattaagttaagggactaaatgatgtattaagcct 247  Q
    ||||||||| || |||||  |||||||||||||| ||| || |||||||||||||||||||||| ||| ||||||||||||||    
T  42962098 gaccaatttaaagcgtttaatagttaggggaccaattcgaa-aaaaagaattaagttaagggacaaaacgatgtattaagcct 42962017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 12935991 - 12936224
Alignment:
Q  14 aagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaatattaggc 113  Q
    ||||||||||||   ||||||||||||  ||||||||| |||  || ||| ||||| |||  |||||| ||||||||| |  |||||||||||| ||  |    
T  12935991 aagaagatgaagcttgggaaaaaattagatgttggtggttcagcgtggtatacaatggaccagcaatcgaatggttgaaacaatataaaaaatagtaaac 12936090  T
Q  114 attaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaaga 213  Q
    |||||||||| ||| || | ||||||||  |  ||| | | ||||| ||   |||||| |||| ||  ||| ||||||||||||||   | | ||  | |    
T  12936091 attaaaaaacaaacggaaatgaccaaaatggtaaacagcataagacttattggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaa 12936190  T
Q  214 attaagttaagggactaaatgatgtattaagcct 247  Q
    | ||||||||||||||||||||||||||||||||    
T  12936191 aataagttaagggactaaatgatgtattaagcct 12936224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 14212266 - 14212337
Alignment:
Q  178 acgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaagcctac 249  Q
    |||||||||||||| ||||||||| | | |||||||||||||||||  ||| |||||||  |||||||||||    
T  14212266 acgttttttagttatgggaccattatgaaaaaaagaattaagttaaatgaccaaatgatcaattaagcctac 14212337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 22650635 - 22650702
Alignment:
Q  132 aggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||||||||||||||| | |||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  22650635 aggaccaaaagaggtaacggcaaaagacataagggaccaaattgagacactttatagttaggggacca 22650702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 1273255 - 1273189
Alignment:
Q  75 tgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaa 141  Q
    ||||||| ||||||||| || |||| ||||||||||  ||||||||||||||| ||| |||||||||    
T  1273255 tgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaactaacggaggggaccaaaa 1273189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 248
Target Start/End: Complemental strand, 19825981 - 19825867
Alignment:
Q  134 gaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaat 233  Q
    |||||||| ||| |||| ||||| | ||||  ||||| ||||| ||||||||||||||||||| ||   | | ||  | || ||||||||||||| ||||    
T  19825981 gaccaaaataggcaacgaaagaatatataaaggaccagtttgagacgttttttagttaggggatcaaattgaaaaccaaaaataagttaagggaccaaat 19825882  T
Q  234 gatgtattaagccta 248  Q
    |||||||||||||||    
T  19825881 gatgtattaagccta 19825867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 39050763 - 39050681
Alignment:
Q  166 gaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    ||||| ||||||||||||  |||||| ||||||| | ||| ||||||||||||||||||||   |||||||  ||||||||||    
T  39050763 gaccattttgaaacgtttaatagttaagggaccaatttaaaaaaaagaattaagttaaggggtcaaatgattaattaagccta 39050681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 199
Target Start/End: Complemental strand, 18693821 - 18693740
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||||||||||||||||||||||||||||  ||||||  || | |||||  |||| || |||| |||||| |||||||    
T  18693821 aaaaactaacagagaggaccaaaagaggtaacgacagaagatttatgggaccagattgagacattttatagttaagggacca 18693740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 247
Target Start/End: Original strand, 42963256 - 42963337
Alignment:
Q  166 gaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaagcct 247  Q
    |||||| |||||||||||  ||||||| |||||| | | | |||||||||| | ||||||||| ||| ||||||||||||||    
T  42963256 gaccaaattgaaacgtttaatagttagaggaccaatttgaaaaaaagaattcaattaagggaccaaacgatgtattaagcct 42963337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 247
Target Start/End: Complemental strand, 1663212 - 1663181
Alignment:
Q  216 taagttaagggactaaatgatgtattaagcct 247  Q
    ||||||||||||||||||||||||||||||||    
T  1663212 taagttaagggactaaatgatgtattaagcct 1663181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 4567973 - 4568048
Alignment:
Q  124 taacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||| |||| |||||||| |||||| || |||||||||||| |||||| |||| ||  ||| ||||||||||||||    
T  4567973 taacggagatgaccaaaataggtaaaggcagaagacataagggaccaaattgagacactttatagttaggggacca 4568048  T

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Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 8188146 - 8188213
Alignment:
Q  71 gacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggacca 138  Q
    ||||||||||| ||||||| | || |||| | |||| |||| ||||||||||||||| ||||||||||    
T  8188146 gacatgcaatcaaatggttaaaatcatatcagaaattttagacattaaaaaactaacggagaggacca 8188213  T

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Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 247
Target Start/End: Original strand, 12950351 - 12950382
Alignment:
Q  216 taagttaagggactaaatgatgtattaagcct 247  Q
    ||||||||||||||||||||||||||||||||    
T  12950351 taagttaagggactaaatgatgtattaagcct 12950382  T

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Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 20991656 - 20991719
Alignment:
Q  132 aggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttagggg 195  Q
    |||||||||||||||||||  | |||||||||| |||||| |||| || |||| ||||||||||    
T  20991656 aggaccaaaagaggtaacgacaaaagacataagggaccaaattgagacattttatagttagggg 20991719  T

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Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 24805350 - 24805401
Alignment:
Q  193 gggaccattctaagaaaaagaattaagttaagggactaaatgatgtattaag 244  Q
    ||||||||| | | |||||||||||||||||||||| ||||||| |||||||    
T  24805350 gggaccattatgaaaaaaagaattaagttaagggaccaaatgatatattaag 24805401  T

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Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 15857560 - 15857634
Alignment:
Q  67 aatagacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaaaa 141  Q
    ||||||| ||||||  ||||||||  || |||| ||||||||||  ||||||||||||||| |||| ||||||||    
T  15857560 aatagacttgcaattgaatggttggaatcatatcaaaaatattaaacattaaaaaactaacggagatgaccaaaa 15857634  T

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Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 21389114 - 21389156
Alignment:
Q  96 atataaaaaatattaggcattaaaaaactaacagagaggacca 138  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||    
T  21389114 atataaaaaattttagacattaaaaaactaacggagaggacca 21389156  T

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Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 3953960 - 3953919
Alignment:
Q  207 aaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    |||||||||||||||||||||| || |||| |||||||||||    
T  3953960 aaaaagaattaagttaagggaccaattgatatattaagccta 3953919  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 5382967 - 5382935
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| |||||||||||||||||||    
T  5382967 taagttaagggaccaaatgatgtattaagccta 5382935  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 6629756 - 6629724
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| |||||||||||||||||||    
T  6629756 taagttaagggaccaaatgatgtattaagccta 6629724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 139
Target Start/End: Original strand, 9170835 - 9170903
Alignment:
Q  71 gacatgcaatccaatggttgagattatataaaaaatattaggcattaaaaaactaacagagaggaccaa 139  Q
    ||||||||||| ||||||| | || |||||||||||||  | |||||| ||||||||| || |||||||    
T  9170835 gacatgcaatcaaatggttaaaatgatataaaaaatatctgacattaagaaactaacatagtggaccaa 9170903  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 14210448 - 14210396
Alignment:
Q  8 ggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgtt 60  Q
    ||||| ||||||||||||||||| |||||||||| ||| | ||| ||||||||    
T  14210448 ggaaggaagaagatgaagaaaggaaaaaaattaattgtagatggttcattgtt 14210396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 30916209 - 30916241
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| |||||||||||||||||||    
T  30916209 taagttaagggaccaaatgatgtattaagccta 30916241  T

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Target: scaffold0024 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 72978 - 73109
Alignment:
Q  117 aaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaatt 216  Q
    ||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||  ||  ||| | ||||||||||||   | | ||  | || |    
T  72978 aaaaaactaacggagaggaccaaaagaggtaacgacagaagacataagagaccaatttgtgacactttattgttaggggaccaaagtgaaaaccaaaaat 73077  T
Q  217 aagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||||||||||||||||||||||    
T  73078 aagttaagggactaaatgatgtattaagccta 73109  T

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Target: scaffold0013 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 123
Target Start/End: Complemental strand, 96394 - 96278
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaat 106  Q
    |||||| |||||||| |||||||||||||||||| |||||||||| ||| ||| ||||| ||||||| ||||||| |||||| || |  |||| ||||||    
T  96394 tggaaggaagaagataaagaaagggaaaaaattaggtgttggtggttcagtgtggtacataatagacctgcaatcgaatggtcgaaaacatatcaaaaat 96295  T
Q  107 attaggcattaaaaaac 123  Q
    |||||  ||||||||||    
T  96294 attagatattaaaaaac 96278  T

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Target: scaffold0015 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 207791 - 207866
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttagg 193  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||| || |||||||| |||||||||| |||||    
T  207791 aaaaactaacggagaggaccaaaagagataacggaagaagacataagggatcaatttgagacgttttttaattagg 207866  T

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Target: scaffold0177 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 1876 - 1797
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| ||||||||||||||||||||||  |||||||||||| |||||| |||| ||  ||| || |||||||||||    
T  1876 aaactaacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttataattaggggacca 1797  T

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Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 243623 - 243694
Alignment:
Q  160 ataagagaccaatttgaaacgttttttagttaggggaccattctaagaaaaagaattaagttaagggactaa 231  Q
    ||||| |||||| |||| |||||||  ||||| ||||||||| ||| ||||||||||||| |||||||||||    
T  243623 ataagggaccaaattgagacgttttagagttatgggaccattttaaaaaaaagaattaagataagggactaa 243694  T

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Target: scaffold0290 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 8614 - 8483
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaaaaaa-ttaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaa 105  Q
    |||||| || |||||||||| |||||||||| ||| ||| || ||| ||| | ||||| | ||  ||| ||||||| ||||||||| ||||||| | |||    
T  8614 tggaaggaataagatgaagagagggaaaaaaattatgtggtgatggttcactattgtatataacggacctgcaatcgaatggttgaaattatatcagaaa 8515  T
Q  106 tattaggcattaaaaaactaacagagaggacc 137  Q
    | |||  ||||||||||||||| |||| ||||    
T  8514 tgttacacattaaaaaactaacggagatgacc 8483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 9569 - 9601
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| |||||||||||||||||||    
T  9569 taagttaagggaccaaatgatgtattaagccta 9601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 5278 - 5211
Alignment:
Q  132 aggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||||||||||||||| | ||||||| | ||||||| |||| ||  ||| ||||||||||||||    
T  5278 aggaccaaaagaggtaacggcaaaagacattatagaccaaattgagacactttatagttaggggacca 5211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 458455 - 458534
Alignment:
Q  120 aaactaacagagaggaccaaaagaggtaacggaagaagacataagagaccaatttgaaacgttttttagttaggggacca 199  Q
    |||||||| |||||||||||||||| |||| | |||||||||||| |||||| || | ||  ||| || |||||||||||    
T  458455 aaactaacggagaggaccaaaagagataacagcagaagacataagggaccaaattaagacactttataattaggggacca 458534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 22360 - 22227
Alignment:
Q  7 tggaagaaagaagatgaagaaagggaaaaaattaagtgttggtggctcattgttgtacacaatagacatgcaatccaatggttgagattatataaaaaat 106  Q
    |||||| ||||||||||||| |||||||||||||  || || ||| ||| ||||||| | |||  || || ||| ||||||| || || |||| | ||||    
T  22360 tggaaggaagaagatgaagagagggaaaaaattacatggtgatggttcactgttgtatataatgtacctggaat-caatggtggaaatcatatcagaaat 22262  T
Q  107 attaggcattaaaaaactaacagagaggaccaaaa 141  Q
     |||| |||||||||| |||| |||| ||||||||    
T  22261 gttagacattaaaaaattaacggagatgaccaaaa 22227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 148
Target Start/End: Original strand, 39894 - 39924
Alignment:
Q  118 aaaaactaacagagaggaccaaaagaggtaa 148  Q
    |||||||||||||||||||||||||||||||    
T  39894 aaaaactaacagagaggaccaaaagaggtaa 39924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 141
Target Start/End: Original strand, 42278 - 42362
Alignment:
Q  57 tgttgtacacaatagacatgcaatccaatggttgagattatat-aaaaaatattaggcattaaaaaactaacagagaggaccaaaa 141  Q
    ||||||| ||||| ||| ||||||| || |||||| || |||| ||||||||| |  |||||||| ||||||||||||||||||||    
T  42278 tgttgtatacaatggacctgcaatcaaacggttgaaatcatatcaaaaaatataaa-cattaaaatactaacagagaggaccaaaa 42362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 1206 - 1247
Alignment:
Q  207 aaaaagaattaagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||||||||| | ||| ||||||||||||||||    
T  1206 aaaaagaattaagttaaggaattaattgatgtattaagccta 1247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 719 - 751
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| |||||||||||||||||||    
T  719 taagttaagggaccaaatgatgtattaagccta 751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 555 - 523
Alignment:
Q  216 taagttaagggactaaatgatgtattaagccta 248  Q
    ||||||||||||| |||||||||||||||||||    
T  555 taagttaagggaccaaatgatgtattaagccta 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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