View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1304_high_76 (Length: 333)

Name: NF1304_high_76
Description: NF1304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1304_high_76
NF1304_high_76
[»] chr8 (44 HSPs)
chr8 (56-214)||(35215648-35215801)
chr8 (211-299)||(35217930-35218018)
chr8 (188-254)||(42795137-42795203)
chr8 (188-254)||(9427197-9427263)
chr8 (188-259)||(9203416-9203487)
chr8 (188-254)||(42795127-42795193)
chr8 (188-255)||(29916172-29916239)
chr8 (188-254)||(42149158-42149224)
chr8 (195-259)||(3611808-3611872)
chr8 (195-259)||(8568857-8568921)
chr8 (188-256)||(20524198-20524266)
chr8 (195-259)||(39655454-39655518)
chr8 (188-259)||(3225812-3225883)
chr8 (195-254)||(11301985-11302044)
chr8 (195-254)||(11302932-11302991)
chr8 (53-120)||(20399702-20399769)
chr8 (53-120)||(24928059-24928126)
chr8 (195-254)||(27781923-27781982)
chr8 (53-120)||(32303171-32303238)
chr8 (195-254)||(39655456-39655515)
chr8 (188-259)||(40802235-40802306)
chr8 (195-254)||(42149168-42149227)
chr8 (195-254)||(42631821-42631880)
chr8 (188-259)||(43483964-43484035)
chr8 (195-257)||(3225819-3225881)
chr8 (53-115)||(4230646-4230708)
chr8 (188-254)||(9427207-9427273)
chr8 (188-254)||(43295920-43295986)
chr8 (188-257)||(24287817-24287886)
chr8 (195-259)||(1647077-1647141)
chr8 (195-259)||(1647079-1647143)
chr8 (53-113)||(5858570-5858630)
chr8 (56-112)||(11254934-11254990)
chr8 (198-250)||(11692093-11692145)
chr8 (190-254)||(13832050-13832114)
chr8 (183-259)||(14052995-14053071)
chr8 (53-109)||(29108744-29108800)
chr8 (198-254)||(29916173-29916229)
chr8 (195-259)||(34188355-34188419)
chr8 (195-259)||(34188357-34188421)
chr8 (195-259)||(35063497-35063561)
chr8 (195-259)||(37922849-37922913)
chr8 (195-259)||(37922851-37922915)
chr8 (195-259)||(38883983-38884047)
[»] chr4 (42 HSPs)
chr4 (187-258)||(44551229-44551300)
chr4 (183-259)||(21003967-21004043)
chr4 (52-120)||(55826535-55826603)
chr4 (188-259)||(42013178-42013249)
chr4 (188-257)||(18423924-18423993)
chr4 (195-259)||(9992641-9992705)
chr4 (183-259)||(23599816-23599892)
chr4 (53-120)||(31918470-31918537)
chr4 (53-120)||(37349228-37349295)
chr4 (53-120)||(43893343-43893410)
chr4 (188-254)||(24275259-24275325)
chr4 (188-257)||(10572753-10572822)
chr4 (186-254)||(24275247-24275315)
chr4 (187-259)||(32112351-32112423)
chr4 (183-259)||(33084754-33084830)
chr4 (195-259)||(51126142-51126206)
chr4 (195-259)||(51126144-51126208)
chr4 (188-259)||(13743890-13743961)
chr4 (183-254)||(20542830-20542901)
chr4 (195-254)||(21003982-21004041)
chr4 (195-254)||(24529612-24529671)
chr4 (195-258)||(41788960-41789023)
chr4 (188-259)||(44639783-44639854)
chr4 (188-259)||(50038482-50038553)
chr4 (188-259)||(50045704-50045775)
chr4 (188-246)||(5816571-5816629)
chr4 (188-254)||(40881459-40881525)
chr4 (188-250)||(44551244-44551306)
chr4 (188-257)||(3511741-3511810)
chr4 (63-120)||(26564957-26565014)
chr4 (188-217)||(37306931-37306960)
chr4 (206-254)||(18423934-18423982)
chr4 (186-254)||(20542845-20542913)
chr4 (195-259)||(23329407-23329471)
chr4 (195-259)||(23710874-23710938)
chr4 (195-259)||(29978529-29978593)
chr4 (188-252)||(33118230-33118294)
chr4 (195-259)||(37175469-37175533)
chr4 (183-215)||(40952566-40952598)
chr4 (194-254)||(53403033-53403093)
chr4 (183-254)||(53508542-53508614)
chr4 (183-254)||(53551621-53551693)
[»] chr7 (61 HSPs)
chr7 (188-250)||(22332329-22332391)
chr7 (188-254)||(27942357-27942423)
chr7 (188-258)||(3341922-3341991)
chr7 (188-254)||(22332339-22332405)
chr7 (195-259)||(37066219-37066283)
chr7 (183-219)||(41095219-41095255)
chr7 (183-259)||(47778466-47778542)
chr7 (53-120)||(16866284-16866351)
chr7 (188-259)||(24211583-24211654)
chr7 (53-120)||(25905743-25905810)
chr7 (188-259)||(33471522-33471593)
chr7 (188-254)||(716266-716332)
chr7 (188-254)||(27942367-27942433)
chr7 (188-257)||(6847315-6847384)
chr7 (63-120)||(21702784-21702841)
chr7 (63-120)||(24753288-24753345)
chr7 (55-120)||(45885676-45885741)
chr7 (194-254)||(4089827-4089887)
chr7 (1-120)||(27850243-27850362)
chr7 (195-259)||(28003217-28003281)
chr7 (195-259)||(30005913-30005977)
chr7 (195-259)||(46477170-46477234)
chr7 (195-254)||(3498336-3498395)
chr7 (53-120)||(10072581-10072648)
chr7 (188-259)||(11032335-11032406)
chr7 (53-120)||(17885580-17885647)
chr7 (53-120)||(18825777-18825844)
chr7 (188-255)||(22106708-22106775)
chr7 (195-254)||(24211593-24211652)
chr7 (53-120)||(35074585-35074652)
chr7 (188-255)||(40529576-40529643)
chr7 (188-259)||(46658769-46658840)
chr7 (188-259)||(48590622-48590693)
chr7 (188-254)||(1706865-1706931)
chr7 (188-254)||(3341932-3341997)
chr7 (188-246)||(21586864-21586922)
chr7 (188-254)||(25079239-25079305)
chr7 (188-254)||(25079249-25079315)
chr7 (188-254)||(27554529-27554595)
chr7 (192-254)||(27554539-27554601)
chr7 (188-250)||(32389201-32389263)
chr7 (195-257)||(35593680-35593742)
chr7 (188-254)||(38238826-38238892)
chr7 (188-217)||(24280900-24280929)
chr7 (197-254)||(34703484-34703541)
chr7 (197-254)||(40416947-40417004)
chr7 (188-253)||(41888772-41888837)
chr7 (190-259)||(45985597-45985666)
chr7 (190-259)||(45989957-45990026)
chr7 (195-259)||(1565449-1565513)
chr7 (195-259)||(1565451-1565515)
chr7 (183-259)||(3838156-3838232)
chr7 (53-121)||(7780123-7780191)
chr7 (64-120)||(17851978-17852034)
chr7 (195-259)||(19531992-19532056)
chr7 (195-259)||(27940782-27940846)
chr7 (195-259)||(27940784-27940848)
chr7 (195-259)||(35160788-35160852)
chr7 (195-259)||(37066221-37066285)
chr7 (183-259)||(40211179-40211255)
chr7 (64-120)||(41741361-41741417)
[»] chr3 (59 HSPs)
chr3 (32-125)||(54317234-54317326)
chr3 (53-120)||(39728781-39728848)
chr3 (53-120)||(48390728-48390795)
chr3 (188-246)||(47334674-47334732)
chr3 (188-257)||(4181970-4182039)
chr3 (189-254)||(23783333-23783398)
chr3 (195-259)||(7933555-7933619)
chr3 (198-257)||(4181973-4182032)
chr3 (53-120)||(7469689-7469756)
chr3 (188-259)||(21659170-21659241)
chr3 (53-120)||(39655184-39655251)
chr3 (195-254)||(40504105-40504164)
chr3 (53-120)||(44639384-44639451)
chr3 (195-254)||(46739346-46739405)
chr3 (188-254)||(19843950-19844016)
chr3 (188-254)||(39530427-39530493)
chr3 (188-254)||(42449147-42449213)
chr3 (188-254)||(47334684-47334750)
chr3 (55-120)||(43582689-43582754)
chr3 (188-257)||(47143322-47143391)
chr3 (186-259)||(52638070-52638143)
chr3 (195-259)||(16127787-16127851)
chr3 (188-259)||(1927533-1927604)
chr3 (53-112)||(10371192-10371251)
chr3 (188-259)||(29076562-29076633)
chr3 (188-259)||(32589347-32589418)
chr3 (53-120)||(42758484-42758551)
chr3 (188-251)||(43898125-43898188)
chr3 (53-120)||(44953346-44953413)
chr3 (188-259)||(46739344-46739415)
chr3 (53-112)||(49580174-49580233)
chr3 (188-255)||(52315431-52315498)
chr3 (188-254)||(10872704-10872770)
chr3 (195-257)||(16894209-16894271)
chr3 (188-254)||(33412497-33412563)
chr3 (188-254)||(33412507-33412573)
chr3 (195-257)||(34935577-34935639)
chr3 (188-254)||(37897724-37897790)
chr3 (188-250)||(39289593-39289655)
chr3 (192-254)||(41349696-41349758)
chr3 (188-246)||(45736737-45736795)
chr3 (188-250)||(51165845-51165907)
chr3 (188-254)||(52931683-52931749)
chr3 (188-257)||(3648738-3648807)
chr3 (197-254)||(23783342-23783399)
chr3 (188-257)||(26121571-26121640)
chr3 (188-257)||(26244412-26244481)
chr3 (55-120)||(29284448-29284513)
chr3 (194-259)||(40326476-40326541)
chr3 (188-249)||(42595784-42595845)
chr3 (195-259)||(18480915-18480979)
chr3 (194-254)||(19843960-19844020)
chr3 (198-254)||(21403938-21403994)
chr3 (195-259)||(33638951-33639015)
chr3 (195-259)||(40504103-40504167)
chr3 (195-259)||(44435211-44435275)
chr3 (195-259)||(44435213-44435277)
chr3 (190-250)||(51204517-51204577)
chr3 (195-259)||(54690477-54690541)
[»] chr5 (71 HSPs)
chr5 (195-259)||(35907869-35907933)
chr5 (188-247)||(36441142-36441201)
chr5 (188-257)||(42480509-42480578)
chr5 (53-113)||(12866470-12866530)
chr5 (183-254)||(35172457-35172528)
chr5 (195-259)||(18942025-18942089)
chr5 (195-259)||(21152625-21152689)
chr5 (195-259)||(21159760-21159824)
chr5 (195-259)||(21163567-21163631)
chr5 (195-251)||(35907871-35907927)
chr5 (188-259)||(14064847-14064918)
chr5 (188-250)||(14416438-14416500)
chr5 (188-254)||(26300153-26300219)
chr5 (189-259)||(34147973-34148043)
chr5 (188-254)||(37944644-37944710)
chr5 (55-120)||(4920938-4921003)
chr5 (195-259)||(3161265-3161329)
chr5 (195-259)||(7336894-7336958)
chr5 (195-259)||(13420473-13420537)
chr5 (195-259)||(15966680-15966744)
chr5 (195-259)||(31787255-31787319)
chr5 (188-252)||(31947482-31947546)
chr5 (195-259)||(38860839-38860903)
chr5 (188-219)||(780735-780766)
chr5 (188-259)||(12165316-12165387)
chr5 (195-254)||(14064849-14064908)
chr5 (188-259)||(27990389-27990460)
chr5 (53-120)||(30996705-30996772)
chr5 (188-259)||(31691005-31691076)
chr5 (195-254)||(31787257-31787316)
chr5 (53-120)||(33727913-33727980)
chr5 (188-259)||(36137047-36137118)
chr5 (188-259)||(37637301-37637372)
chr5 (56-111)||(42717551-42717606)
chr5 (63-113)||(1218845-1218895)
chr5 (188-254)||(3100437-3100503)
chr5 (188-254)||(3100447-3100513)
chr5 (53-111)||(12834495-12834553)
chr5 (197-255)||(13157374-13157432)
chr5 (188-254)||(14571040-14571106)
chr5 (188-254)||(14571050-14571116)
chr5 (188-254)||(15712153-15712219)
chr5 (188-254)||(19531333-19531399)
chr5 (188-258)||(40208509-40208579)
chr5 (188-254)||(42013864-42013930)
chr5 (188-257)||(5243368-5243437)
chr5 (189-254)||(8961261-8961326)
chr5 (197-254)||(11262370-11262427)
chr5 (188-253)||(11786641-11786706)
chr5 (198-255)||(21945422-21945479)
chr5 (188-217)||(32398082-32398111)
chr5 (195-248)||(40905903-40905956)
chr5 (195-259)||(4162842-4162906)
chr5 (195-259)||(12891327-12891391)
chr5 (198-254)||(13157375-13157431)
chr5 (195-259)||(15965993-15966057)
chr5 (195-259)||(15965995-15966059)
chr5 (195-259)||(16056782-16056846)
chr5 (195-259)||(16056784-16056848)
chr5 (183-259)||(17096470-17096546)
chr5 (195-259)||(18942023-18942087)
chr5 (195-259)||(21152627-21152691)
chr5 (195-259)||(21159762-21159826)
chr5 (195-259)||(21163569-21163633)
chr5 (195-259)||(23118186-23118250)
chr5 (188-252)||(25773275-25773339)
chr5 (183-259)||(30778027-30778103)
chr5 (195-259)||(34186392-34186456)
chr5 (195-259)||(34186394-34186458)
chr5 (195-259)||(40905901-40905965)
chr5 (195-259)||(43176290-43176354)
[»] chr2 (56 HSPs)
chr2 (188-254)||(42955075-42955141)
chr2 (188-257)||(42955065-42955134)
chr2 (183-259)||(37396231-37396307)
chr2 (188-259)||(17843988-17844059)
chr2 (188-259)||(43514788-43514859)
chr2 (188-254)||(921858-921924)
chr2 (195-259)||(4898202-4898266)
chr2 (195-259)||(4945596-4945660)
chr2 (53-113)||(24414050-24414110)
chr2 (188-248)||(42263047-42263107)
chr2 (53-120)||(10920749-10920816)
chr2 (188-259)||(20195321-20195392)
chr2 (188-255)||(20504284-20504351)
chr2 (53-120)||(30847057-30847124)
chr2 (183-254)||(37396246-37396317)
chr2 (188-259)||(38721420-38721491)
chr2 (188-254)||(29771750-29771816)
chr2 (188-254)||(32346110-32346175)
chr2 (195-259)||(25668450-25668514)
chr2 (195-259)||(27327867-27327931)
chr2 (195-259)||(27327869-27327933)
chr2 (56-120)||(42797912-42797976)
chr2 (188-259)||(2795342-2795413)
chr2 (188-219)||(5762533-5762564)
chr2 (53-112)||(13830846-13830905)
chr2 (188-259)||(17378092-17378163)
chr2 (195-254)||(20195331-20195390)
chr2 (195-254)||(29771760-29771819)
chr2 (188-259)||(36547373-36547444)
chr2 (188-259)||(41823773-41823844)
chr2 (188-258)||(800731-800801)
chr2 (188-254)||(921848-921914)
chr2 (188-254)||(11726537-11726603)
chr2 (188-242)||(19951499-19951553)
chr2 (188-246)||(23377974-23378032)
chr2 (188-254)||(30902305-30902371)
chr2 (188-218)||(33555209-33555239)
chr2 (188-246)||(41805306-41805364)
chr2 (195-248)||(3463198-3463251)
chr2 (188-257)||(43701386-43701455)
chr2 (183-215)||(4637088-4637120)
chr2 (195-259)||(4898204-4898268)
chr2 (195-259)||(4945598-4945662)
chr2 (195-259)||(5144305-5144369)
chr2 (183-215)||(9071232-9071264)
chr2 (56-120)||(9632500-9632564)
chr2 (195-259)||(9709695-9709759)
chr2 (188-259)||(14393159-14393228)
chr2 (183-219)||(15178041-15178077)
chr2 (195-259)||(21208929-21208993)
chr2 (195-259)||(30202523-30202587)
chr2 (195-259)||(32070498-32070562)
chr2 (195-259)||(32070500-32070564)
chr2 (195-259)||(33618236-33618300)
chr2 (195-259)||(34911135-34911199)
chr2 (195-255)||(37486040-37486100)
[»] chr6 (27 HSPs)
chr6 (53-125)||(10187986-10188058)
chr6 (188-254)||(6047988-6048054)
chr6 (64-120)||(2367447-2367503)
chr6 (53-120)||(12141495-12141562)
chr6 (188-259)||(21478585-21478656)
chr6 (188-254)||(21506495-21506561)
chr6 (183-259)||(2033206-2033282)
chr6 (199-259)||(3212278-3212338)
chr6 (183-215)||(27082407-27082439)
chr6 (188-219)||(11637202-11637233)
chr6 (53-120)||(27534794-27534861)
chr6 (53-120)||(30986363-30986430)
chr6 (53-120)||(31496544-31496611)
chr6 (53-120)||(31501930-31501997)
chr6 (188-254)||(6047998-6048064)
chr6 (188-254)||(15467605-15467671)
chr6 (222-258)||(3773206-3773242)
chr6 (195-259)||(4156378-4156442)
chr6 (53-113)||(5863301-5863361)
chr6 (195-259)||(9908173-9908237)
chr6 (195-259)||(9908175-9908239)
chr6 (195-259)||(10731510-10731574)
chr6 (195-259)||(10731512-10731576)
chr6 (194-250)||(15467619-15467675)
chr6 (195-259)||(32161601-32161665)
chr6 (195-259)||(32786153-32786217)
chr6 (195-259)||(32786155-32786219)
[»] chr1 (58 HSPs)
chr1 (183-254)||(13145758-13145830)
chr1 (183-254)||(35049959-35050030)
chr1 (195-259)||(35049969-35050033)
chr1 (188-259)||(17310450-17310521)
chr1 (188-259)||(26059156-26059227)
chr1 (188-254)||(52253580-52253646)
chr1 (188-254)||(52879916-52879982)
chr1 (188-257)||(1597228-1597297)
chr1 (195-259)||(2091783-2091847)
chr1 (52-112)||(28298056-28298116)
chr1 (195-259)||(47011283-47011347)
chr1 (195-259)||(48605107-48605171)
chr1 (195-259)||(48605109-48605173)
chr1 (188-259)||(4682969-4683040)
chr1 (53-120)||(5181150-5181217)
chr1 (188-219)||(9590821-9590852)
chr1 (188-255)||(12447495-12447562)
chr1 (195-254)||(17310460-17310519)
chr1 (188-259)||(27549077-27549148)
chr1 (53-112)||(29936533-29936592)
chr1 (187-254)||(34598893-34598960)
chr1 (188-259)||(37255158-37255229)
chr1 (195-254)||(38824330-38824389)
chr1 (188-219)||(45010870-45010901)
chr1 (191-246)||(50550154-50550209)
chr1 (188-254)||(3384255-3384321)
chr1 (188-218)||(11324511-11324541)
chr1 (188-218)||(11482532-11482562)
chr1 (188-218)||(26674264-26674294)
chr1 (188-246)||(31998239-31998297)
chr1 (188-254)||(34598904-34598970)
chr1 (188-254)||(34953928-34953994)
chr1 (188-250)||(47293282-47293344)
chr1 (188-254)||(50550161-50550227)
chr1 (188-257)||(1597221-1597290)
chr1 (53-118)||(19572425-19572490)
chr1 (198-259)||(31634434-31634495)
chr1 (53-122)||(34611184-34611253)
chr1 (195-248)||(47991816-47991869)
chr1 (188-257)||(50503222-50503291)
chr1 (195-259)||(2091785-2091849)
chr1 (195-255)||(12993563-12993623)
chr1 (195-259)||(15278602-15278666)
chr1 (195-259)||(15278604-15278668)
chr1 (195-259)||(21852474-21852538)
chr1 (195-259)||(21852476-21852540)
chr1 (195-259)||(25378296-25378360)
chr1 (195-259)||(31327606-31327670)
chr1 (195-259)||(31909786-31909850)
chr1 (195-259)||(31909788-31909852)
chr1 (195-259)||(34037957-34038021)
chr1 (195-259)||(39015600-39015664)
chr1 (183-259)||(40960776-40960852)
chr1 (208-256)||(40988402-40988450)
chr1 (188-248)||(42914568-42914628)
chr1 (195-259)||(50998341-50998405)
chr1 (195-259)||(50998343-50998407)
chr1 (194-254)||(52879926-52879986)
[»] scaffold0172 (2 HSPs)
scaffold0172 (195-259)||(11623-11687)
scaffold0172 (195-259)||(11621-11685)
[»] scaffold0041 (1 HSPs)
scaffold0041 (183-219)||(108041-108077)
[»] scaffold0002 (1 HSPs)
scaffold0002 (188-248)||(491882-491942)
[»] scaffold0036 (2 HSPs)
scaffold0036 (188-246)||(89648-89706)
scaffold0036 (188-257)||(89630-89699)
[»] scaffold0039 (1 HSPs)
scaffold0039 (197-254)||(54430-54487)
[»] scaffold0047 (1 HSPs)
scaffold0047 (195-259)||(63477-63541)
[»] scaffold0111 (2 HSPs)
scaffold0111 (186-215)||(38398-38427)
scaffold0111 (195-259)||(38046-38110)
[»] scaffold0756 (1 HSPs)
scaffold0756 (183-259)||(3545-3621)
[»] scaffold0542 (1 HSPs)
scaffold0542 (183-259)||(3451-3527)
[»] scaffold0519 (1 HSPs)
scaffold0519 (56-112)||(10403-10459)


Alignment Details
Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 56 - 214
Target Start/End: Original strand, 35215648 - 35215801
Alignment:
Q  56 aaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcctgcctaatcttattcaccttgcaaaatgcacatact 155  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||    ||||||||||||| ||||||||||||||||||||||    
T  35215648 aaaaccggtcaaattgggtttgggtcggacgggtaaccacggatatgggttttgttgcta----tgcctaatcttatccaccttgcaaaatgcacatact 35215743  T
Q  156 ccattcgttgtcaattatnnnnnnnnnttgacttttaaattcattcaattaatgatgta 214  Q
    || || |||||| ||||          || |||||||||||||||||||||||||||||    
T  35215744 ccctt-gttgtcgattacaaagaaattttaacttttaaattcattcaattaatgatgta 35215801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 211 - 299
Target Start/End: Original strand, 35217930 - 35218018
Alignment:
Q  211 tgtatatgacccatagtatagatcatatacatcattaattgaataaaccnnnnnnnnnnnnnttgcttataattgacaatggagggagt 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||    
T  35217930 tgtatatgacccatagtatagatcatatacatcattaattgaataaaccaaaaattaaaaaattgcttataattgacaatggagggagt 35218018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 42795203 - 42795137
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||| ||||||||||||||||||||||||  ||||| ||||||||| ||||||||||||||||||    
T  42795203 ttttaagttcattcaattaatgatgtatatgttccataatatagatcacatacatcattaattgaat 42795137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 9427197 - 9427263
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| ||||||||||| |||||||||||||| ||||||||| ||||||||| || |||||||||||    
T  9427197 ttttagattcattcaatcaatgatgtatatgatccatagtattgatcatatatattattaattgaat 9427263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 9203416 - 9203487
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| ||||||| |||||||||||||||||  |||| |||||| || |||||||||||||||||| ||||    
T  9203416 ttttaagttcattcgattaatgatgtatatgattcatattatagaccacatacatcattaattgaatgaacc 9203487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 42795127 - 42795193
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||| ||||||||||||||||||||| ||| | ||| ||| || |||||||||||||||||||||    
T  42795127 ttttaagttcattcaattaatgatgtatgtgatctatattatggaacatatacatcattaattgaat 42795193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 29916239 - 29916172
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaata 255  Q
    ||||| |||||||||||| ||||||||||||| | ||| ||||||  | |||||||||||||||||||    
T  29916239 ttttagattcattcaattgatgatgtatatgatctatattatagactacatacatcattaattgaata 29916172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 42149158 - 42149224
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||| ||||||||||||||||||||| |||   ||| || ||| |||||||||||||||||||||    
T  42149158 ttttaagttcattcaattaatgatgtatgtgatttatattagagaccatatacatcattaattgaat 42149224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 3611808 - 3611872
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||   |||| |||||| || |||||||||||||||||| ||||    
T  3611808 ttcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaacc 3611872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 8568921 - 8568857
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||   |||| |||||| || |||||||||||||||||| ||||    
T  8568921 ttcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaacc 8568857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 20524198 - 20524266
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataa 256  Q
    ||||| ||||||||||||||| |||||||||  ||||| |||| | || ||| ||||||||||||||||    
T  20524198 ttttagattcattcaattaataatgtatatggtccatattataaaccacatatatcattaattgaataa 20524266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 39655518 - 39655454
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| ||| || || |||||||||||||||||| ||||    
T  39655518 ttcattcaattaatgatgtatgtggtccataatatggaccacatacatcattaattgaatgaacc 39655454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 3225812 - 3225883
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||| |||||||||||||||||||||| |  || |||||| || |||||||||| | ||||| ||||    
T  3225812 ttttaaatttattcaattaatgatgtatatgatctttattatagaccacatacatcatttaatgaatgaacc 3225883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 11302044 - 11301985
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||| ||||||| |||||| |||  |||| ||| ||||||||||||||||||||||||    
T  11302044 ttcatttaattaataatgtatgtgattcatattattgatcatatacatcattaattgaat 11301985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 11302991 - 11302932
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||| ||||||| |||||| |||  |||| ||| ||||||||||||||||||||||||    
T  11302991 ttcatttaattaataatgtatgtgattcatattattgatcatatacatcattaattgaat 11302932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 20399702 - 20399769
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||  |||||||||| ||||| |||| ||||||||||| | ||| ||||||||||| ||||||    
T  20399702 gggaaaactcgtcaaattgggtttggttcgagcgggtaaccacgggtattggttttgttgccatgcct 20399769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 24928059 - 24928126
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||| ||||| |||  ||||||||| | | ||||||||||||||| ||||||    
T  24928059 gggaaaacccgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggttttgttgccatgcct 24928126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 27781923 - 27781982
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||||| ||  ||||| |||| | || ||||||||||||||||||    
T  27781923 ttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 27781982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 32303171 - 32303238
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||| ||||  |||  ||||||||||| | ||||||||||||||| ||||||    
T  32303171 gggaaaacccgtcaaattgggtttgtttcgggcgggtaaccacgggtatgggttttgttgccatgcct 32303238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 39655456 - 39655515
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||||| ||  ||||| ||| || || ||||||||||||||||||    
T  39655456 ttcattcaattaatgatgtatgtggtccatattatggaccacatacatcattaattgaat 39655515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 40802235 - 40802306
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| ||||||||||||||||||||| ||  ||||| |||  | || |||||||||||||||||| ||||    
T  40802235 ttttaagttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaacc 40802306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 42149227 - 42149168
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||||||||  |  || |||| |||| ||||||||||||||||||    
T  42149227 ttcattcaattaatgatgtatatggtctctaatataaatcacatacatcattaattgaat 42149168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 42631880 - 42631821
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||||| ||  ||||| |||| | || ||||||||||||||||||    
T  42631880 ttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 42631821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 43483964 - 43484035
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| |||||||||||||||||||||| ||   |||| ||| || || |||||||||||||||||| ||||    
T  43483964 ttttagattcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacc 43484035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 3225881 - 3225819
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    |||||||| | |||||||||| ||  | ||| || ||||||||||||||||||||||||||||    
T  3225881 ttcattcattaaatgatgtatgtggtctataataaagatcatatacatcattaattgaataaa 3225819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 4230708 - 4230646
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgcta 115  Q
    ||||||||| |||||||||| ||||| |||  ||||||||||||  ||||| |||||||||||    
T  4230708 gggaaaacccgtcaaattgggtttggttcgggcgggtaaccacatgtatggattttgttgcta 4230646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 9427273 - 9427207
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| ||| ||||||||||| || ||||||| | ||| ||| |||||||||||||||| |||||||    
T  9427273 ttttagattaattcaattaataatatatatgatcaatactatggatcatatacatcattgattgaat 9427207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 43295920 - 43295986
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| ||||||||||| |||||||||| ||  ||||| |||||| || |||||||||| |||||||    
T  43295920 ttttagattcattcaatgaatgatgtatgtggtccatattatagaccacatacatcatttattgaat 43295986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 24287817 - 24287886
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    ||||| ||||||||| | |||||||||||||  | ||| || ||| ||||||||||||||| ||||||||    
T  24287817 ttttagattcattcattaaatgatgtatatggtctataataaagaccatatacatcattaactgaataaa 24287886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 1647141 - 1647077
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||| |||||||||||| |||  |||| ||| ||||| |||||||||||| ||||| ||||    
T  1647141 ttcattcatttaatgatgtatgtgattcataatatggatcacatacatcattaaatgaatgaacc 1647077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 1647079 - 1647143
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||| |||||||||||| ||| ||||| |||  |||| |||||||||||| ||||| ||||    
T  1647079 ttcattcatttaatgatgtatgtgatccatattatgaatcacatacatcattaaatgaatgaacc 1647143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 5858630 - 5858570
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgc 113  Q
    ||||||||| |||||||||||||||| |||    ||||||||||| ||||| |||||||||    
T  5858630 gggaaaacccgtcaaattggatttggttcgggtaggtaaccacaggtatggattttgttgc 5858570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 11254990 - 11254934
Alignment:
Q  56 aaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttg 112  Q
    |||||| |||||||||||||||| ||| || ||||||| ||  ||||||||||||||    
T  11254990 aaaacccgtcaaattggatttggttcggacaggtaaccgcatgtatgggttttgttg 11254934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 11692145 - 11692093
Alignment:
Q  198 attcaattaatgatgtatatgacccatagtatagatcatatacatcattaatt 250  Q
    |||||||||||||||||| ||||  ||| || |||||| ||||||||||||||    
T  11692145 attcaattaatgatgtatgtgacatataataaagatcacatacatcattaatt 11692093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 13832114 - 13832050
Alignment:
Q  190 ttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||||||||||||||||||| ||| ||   |||| ||| || || ||||||||||||||||||    
T  13832114 ttaaattcattcaattaatgatatatgtggttcatattatggaccacatacatcattaattgaat 13832050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 14053071 - 14052995
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||| |||||||||||  ||||||||| ||   |||| |||||| || |||||||||| ||||||| ||||    
T  14053071 ttgacttttagattcattcaatcgatgatgtatgtggttcatattatagagcacatacatcattgattgaatgaacc 14052995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 29108800 - 29108744
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttg 109  Q
    ||||||||| |||||||||| ||||| ||| ||| |||||| ||| |||||||||||    
T  29108800 gggaaaacccgtcaaattgggtttggttcggacgagtaaccgcagttatgggttttg 29108744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 29916173 - 29916229
Alignment:
Q  198 attcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||||||||||||||| |   | ||| ||||||||||||||||||| ||||||||    
T  29916173 attcaattaatgatgtatgtagtctataatatagatcatatacatcatcaattgaat 29916229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 34188419 - 34188355
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||  || | |||||||||||||||||| ||||    
T  34188419 ttcattcaattaatgatgtatgtggtccataatatgaataacatacatcattaattgaatgaacc 34188355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 34188357 - 34188421
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| | |  |||| ||| || || |||||||||||||||||| ||||    
T  34188357 ttcattcaattaatgatgtatgttattcatattatggaccacatacatcattaattgaatgaacc 34188421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 35063561 - 35063497
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| |||||||||||||| ||   |||| |||||| || |||||||||||||||||| ||||    
T  35063561 ttcatttaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaacc 35063497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 37922913 - 37922849
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||   |||| ||| || || |||||||||||||||||| ||||    
T  37922913 ttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacc 37922849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 37922851 - 37922915
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||  | || |||||||||||||||||| ||||    
T  37922851 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaacc 37922915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 38884047 - 38883983
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| |   ||||| |||| | || |||||||||||||||||| ||||    
T  38884047 ttcattcaattaatgatgtatgttgtccatattataaaccacatacatcattaattgaatgaacc 38883983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 44551229 - 44551300
Alignment:
Q  187 cttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaac 258  Q
    |||||| ||||||| |||||||||||||||||  ||||| |||| |||||||||||||||||||||||||||    
T  44551229 cttttatattcattgaattaatgatgtatatggtccataatataaatcatatacatcattaattgaataaac 44551300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 21003967 - 21004043
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||| ||||||||||||||||||||||||  | | | |||||| || |||||||||||||||||| ||||    
T  21003967 ttgacttttaagttcattcaattaatgatgtatatggtctacattatagaccacatacatcattaattgaatgaacc 21004043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 55826603 - 55826535
Alignment:
Q  52 agggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    |||||||| | |||||||||||||||| ||| |||||||||||| | ||||||||||||||| ||||||    
T  55826603 agggaaaatccgtcaaattggatttggttcggacgggtaaccacgggtatgggttttgttgccatgcct 55826535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 42013178 - 42013249
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||||||||||||||||||||| ||  | ||| |||| | || |||||||||||||||||||||||    
T  42013178 ttttaaattcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaataaacc 42013249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 18423924 - 18423993
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    ||||| |||||||||||||||||||||||||| |  || |||| ||||||||||||||| | ||||||||    
T  18423924 ttttagattcattcaattaatgatgtatatgatctttattataaatcatatacatcatttaatgaataaa 18423993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 9992641 - 9992705
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||| |||||||||||||| | ||| ||||||  |||||||||||| ||||||||||||    
T  9992641 ttcattcaataaatgatgtatatgatcaatattatagactatatacatcatttattgaataaacc 9992705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 23599892 - 23599816
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||| |||||||||||||||||||||||||||| ||  | ||   ||||| || |||||||||||||||||||||||    
T  23599892 ttgatttttaaattcattcaattaatgatgtatgtggtctatgacatagagcacatacatcattaattgaataaacc 23599816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 31918537 - 31918470
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||| ||||| |||  | ||||||||| ||||||||||||||||| ||||||    
T  31918537 gggaaaacccgtcaaattgggtttggttcgggcaggtaaccacggatatgggttttgttgccatgcct 31918470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 37349228 - 37349295
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||| ||||| |||  ||||||||||| | ||||||||||||||| ||||||    
T  37349228 gggaaaacctgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcct 37349295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 43893343 - 43893410
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||| ||||| |||  ||||||||||| | ||||||||||||||| ||||||    
T  43893343 gggaaaacccgtcaaattgggtttggctcgggcgggtaaccacgggtatgggttttgttgccatgcct 43893410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 24275325 - 24275259
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||||||||||||||||||||||||| ||  | ||| | |||| ||||||||| |||||||||||    
T  24275325 ttttaaattcattcaattaatgatgtatgtggtctataatgtagaccatatacataattaattgaat 24275259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 10572753 - 10572822
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    ||||| ||||||||| | |||||||||| ||  | ||| || ||||||||||||||||||||||||||||    
T  10572753 ttttagattcattcattgaatgatgtatgtggtctataataaagatcatatacatcattaattgaataaa 10572822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 24275247 - 24275315
Alignment:
Q  186 acttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||| ||||||||||||||| |||||||||  | | | |||||| || ||||||||||||||||||    
T  24275247 acttttagattcattcaattaattatgtatatggtctacattatagaccacatacatcattaattgaat 24275315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 32112423 - 32112351
Alignment:
Q  187 cttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||| ||||||||||||||||||||| ||  ||||| |||  | || |||||||||||||||||| ||||    
T  32112423 cttttaagttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaatgaacc 32112351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 33084830 - 33084754
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||| |||||||||||||||||||||||| ||| ||   |||| ||| || || |||||||||||||||||| ||||    
T  33084830 ttgatttttaaattcattcaattaatgatatatctggttcatattatggaccacatacatcattaattgaatgaacc 33084754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 51126206 - 51126142
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  | ||| |||||| || |||||||||||||||||| ||||    
T  51126206 ttcattcaattaatgatgtatgtggtctataatatagaccacatacatcattaattgaatgaacc 51126142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 51126144 - 51126208
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  | ||| |||||| || |||||||||||||||||| ||||    
T  51126144 ttcattcaattaatgatgtatgtggtctatattatagaccacatacatcattaattgaatgaacc 51126208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 13743890 - 13743961
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| ||||||| |||||||||||||| ||  ||||| |||| | || |||||||||||||||||| ||||    
T  13743890 ttttagattcatttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaatgaacc 13743961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 20542830 - 20542901
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||| ||||| |||||||||||||||||||||| ||    ||| |||||| || ||||||||||||||||||    
T  20542830 ttgatttttagattcattcaattaatgatgtatgtgggttataatatagaccacatacatcattaattgaat 20542901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 21004041 - 21003982
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||||| ||  | ||| | |||| |||||||||||||||||||||    
T  21004041 ttcattcaattaatgatgtatgtggtctataatgtagaccatatacatcattaattgaat 21003982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 24529612 - 24529671
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||||| ||   |||| |||||| || ||||||||||||||||||    
T  24529612 ttcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaat 24529671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 41788960 - 41789023
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaac 258  Q
    ||||||||||||||||||||| ||  ||||| |||  | || ||||||||||||||||||||||    
T  41788960 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaataaac 41789023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 44639854 - 44639783
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| |||||||||||||||||||||| ||   |||| ||| || || |||||||||||||||||| ||||    
T  44639854 ttttagattcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacc 44639783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 50038482 - 50038553
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| |||||||||||||||||||||| ||   |||| ||| ||| | |||||||||||||||||| ||||    
T  50038482 ttttagattcattcaattaatgatgtatgtggttcataatatggattacatacatcattaattgaatgaacc 50038553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 50045704 - 50045775
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| |||||||||||||||||||||| ||   |||| ||| ||| | |||||||||||||||||| ||||    
T  50045704 ttttagattcattcaattaatgatgtatgtggttcataatatggattacatacatcattaattgaatgaacc 50045775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 5816571 - 5816629
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcatt 246  Q
    ||||||||||||| |||||||||||||||||| |  || ||||||||| ||| ||||||    
T  5816571 ttttaaattcatttaattaatgatgtatatgatctttattatagatcacatatatcatt 5816629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 40881459 - 40881525
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||| ||| | | |||||||||| ||||  ||| || |||||||||||||||||||||||||    
T  40881459 ttttaaatttatttattaaatgatgtatgtgacatataataaagatcatatacatcattaattgaat 40881525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 44551306 - 44551244
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaatt 250  Q
    |||||| || ||||||||||||||||||||||   ||| ||| || |||||||||||||||||    
T  44551306 ttttaagtttattcaattaatgatgtatatgatttatattatggaccatatacatcattaatt 44551244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 3511741 - 3511810
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    ||||| |||||||||||||||||||||||||| |  || |||||| || || ||||||| | ||||||||    
T  3511741 ttttagattcattcaattaatgatgtatatgatctttattatagaccacattcatcatttaatgaataaa 3511810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 26564957 - 26565014
Alignment:
Q  63 gtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    |||||||||||||||| |||   |||||||||| | ||||||||||||||| ||||||    
T  26564957 gtcaaattggatttggttcgggtgggtaaccacgggtatgggttttgttgccatgcct 26565014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 37306960 - 37306931
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatat 217  Q
    ||||||||||||||||||||||||||||||    
T  37306960 ttttaaattcattcaattaatgatgtatat 37306931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 18423982 - 18423934
Alignment:
Q  206 aatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||   ||| || |||||||||||||||||||||||||    
T  18423982 aatgatgtatatgatttataataaagatcatatacatcattaattgaat 18423934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 20542913 - 20542845
Alignment:
Q  186 acttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||||| ||||||||||||||||||||| ||  | ||| ||||   || ||||||||||||||||||    
T  20542913 acttttaagttcattcaattaatgatgtatgtggtctatattataacccacatacatcattaattgaat 20542845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 23329471 - 23329407
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||||| |||||||| ||  ||||| |||| | || |||||||||||||||||| ||||    
T  23329471 ttcattcaattattgatgtatgtggtccatattataaaccacatacatcattaattgaatgaacc 23329407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 23710874 - 23710938
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||||| |||||||| ||  ||||| |||| | || |||||||||||||||||| ||||    
T  23710874 ttcattcaattattgatgtatgtggtccatattataaaccacatacatcattaattgaatgaacc 23710938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 29978593 - 29978529
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||   |||| ||| || || |||||||||||||||||| ||||    
T  29978593 ttcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaatgaacc 29978529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 33118230 - 33118294
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattga 252  Q
    ||||||||||||| ||  |||||||||| ||| | ||| |||||| || ||||||||||||||||    
T  33118230 ttttaaattcatttaacaaatgatgtatgtgatctatattatagaccacatacatcattaattga 33118294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 37175533 - 37175469
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||||||  |||||| ||  ||||| |||| |||| |||||||||||||| ||||||||    
T  37175533 ttcattcaattaacaatgtatgtggtccataatataaatcacatacatcattaattaaataaacc 37175469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 40952566 - 40952598
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtat 215  Q
    |||||||||| ||||||||||||||||||||||    
T  40952566 ttgacttttagattcattcaattaatgatgtat 40952598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 53403093 - 53403033
Alignment:
Q  194 attcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||| |||||||||||||  ||| ||||| |||| | || ||||||||||||||||||    
T  53403093 attcatttaattaatgatgtacgtgatccataatataaaccacatacatcattaattgaat 53403033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 53508614 - 53508542
Alignment:
Q  183 ttgacttt-taaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||||| ||| ||||||||||||||||||||| ||   |||| ||| || || ||||||||||||||||||    
T  53508614 ttgactttctaagttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaat 53508542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 53551621 - 53551693
Alignment:
Q  183 ttgacttt-taaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||||| ||| ||||||||||||||||||||| ||   |||| ||| || || ||||||||||||||||||    
T  53551621 ttgactttctaagttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaat 53551693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 8e-18; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 22332329 - 22332391
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaatt 250  Q
    |||||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  22332329 ttttaagttcattcaattaatgatgtatatgatccataatatagatcacatacatcattaatt 22332391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 27942357 - 27942423
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| |||||||||||||||||||||||||| ||||| |||| | || ||||||||||||||||||    
T  27942357 ttttagattcattcaattaatgatgtatatgatccatattataaaccacatacatcattaattgaat 27942423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 3341922 - 3341991
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaac 258  Q
    ||||| |||||||||||||||||||||||||   |||| ||| ||||| ||||||||||||||||||||||    
T  3341922 ttttatattcattcaattaatgatgtatatggttcata-tatggatcacatacatcattaattgaataaac 3341991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 22332405 - 22332339
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||| |||||| |||||||||||||| ||| | ||| ||| ||||||||||||||||||||||||    
T  22332405 ttttaagttcattgaattaatgatgtatgtgatctatattatggatcatatacatcattaattgaat 22332339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 37066283 - 37066219
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||||| || |||||||||||||||||| ||||    
T  37066283 ttcattcaattaatgatgtatgtggtccataatatagaccacatacatcattaattgaatgaacc 37066219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 41095219 - 41095255
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatga 219  Q
    |||||||||||||||||||||||||||||||||||||    
T  41095219 ttgacttttaaattcattcaattaatgatgtatatga 41095255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 47778542 - 47778466
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||||||||||||||| |   | ||| |||| |||| |||||| ||||||||||| ||||    
T  47778542 ttgacttttaaattcattcaattaatgatgtatgtagtcgataatataaatcacatacattattaattgaatgaacc 47778466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 16866284 - 16866351
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||| ||||| |||  ||||||||||| |||||| |||||||||| ||||||    
T  16866284 gggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgccatgcct 16866351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 24211583 - 24211654
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| ||||||||||||||| |||||| ||   |||| ||| |||||||||||||||||||||||| ||||    
T  24211583 ttttagattcattcaattaataatgtatgtggttcataatatggatcatatacatcattaattgaatgaacc 24211654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 25905743 - 25905810
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||| ||| | |||| ||||||||||| | ||||||||||||||| ||||||    
T  25905743 gggaaaacctgtcaaattgggtttagttcgagcgggtaaccacgggtatgggttttgttgccatgcct 25905810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 33471522 - 33471593
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| |||||||||||||||||||||| ||   |||| |||||| || |||||||||||||||||| ||||    
T  33471522 ttttagattcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaacc 33471593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 716266 - 716332
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| || ||||||||||||||||||||||||  | | || |||||| ||||||||||||||||||    
T  716266 ttttagatacattcaattaatgatgtatatgacatagaataaagatcacatacatcattaattgaat 716332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 27942433 - 27942367
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||| ||||||||||||||||||||| ||    ||| ||| ||||||||||||||||||||||||    
T  27942433 ttttaagttcattcaattaatgatgtatgtggtttataatatggatcatatacatcattaattgaat 27942367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 6847384 - 6847315
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    ||||| ||||||||| | ||| |||||| ||  ||||| || ||||||||||||||||||||||||||||    
T  6847384 ttttagattcattcattaaattatgtatgtgttccataataaagatcatatacatcattaattgaataaa 6847315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 21702784 - 21702841
Alignment:
Q  63 gtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    |||||||||| ||||| |||  ||||||||||| ||||||||||||||||| ||||||    
T  21702784 gtcaaattgggtttggttcgggcgggtaaccacggatatgggttttgttgccatgcct 21702841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 24753288 - 24753345
Alignment:
Q  63 gtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||| ||| |||||||||||| | ||||||||||||||| ||||||    
T  24753288 gtcaaattgaatttggttcggacgggtaaccacgggtatgggttttgttgccatgcct 24753345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 45885741 - 45885676
Alignment:
Q  55 gaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||| || ||||||| ||||| |||| ||||||||||| | ||||||||||||||| ||||||    
T  45885741 gaaaacccgttaaattgggtttggttcgagcgggtaaccacgggtatgggttttgttgccatgcct 45885676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 4089827 - 4089887
Alignment:
Q  194 attcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||| | |||||||||||||  ||||| || ||| |||||||||||||||||||||    
T  4089827 attcattcattaaatgatgtatatgctccataataaagaccatatacatcattaattgaat 4089887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 27850362 - 27850243
Alignment:
Q  1 atacccgtattttgaaatcggg-acaactcaaactcaaccccagtcaaacggagggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagat 99  Q
    |||||||| ||||||||||||| | ||| || || ||| |||| |||||  | || ||||||| ||||||||| ||||| |||  ||||||||||| |||    
T  27850362 atacccgtgttttgaaatcggggaaaacccatacccaaacccaatcaaaacggggaaaaaccg-tcaaattgggtttggttcgggcgggtaaccacggat 27850264  T
Q  100 atgggttttgttgctatgcct 120  Q
    ||| |||||||||| ||||||    
T  27850263 atgagttttgttgccatgcct 27850243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 28003217 - 28003281
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||||| |||||||| ||  ||||| |||| |||| |||||||||||||||||| ||||    
T  28003217 ttcattcaattattgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacc 28003281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 30005977 - 30005913
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| |||  |||| |||||| || |||| ||||||||||||| ||||    
T  30005977 ttcattcaattaatgatgtatgtgattcatattatagaccacatacgtcattaattgaatgaacc 30005913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 46477234 - 46477170
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||| | || |||||||||||||||||| ||||    
T  46477234 ttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaatgaacc 46477170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 3498395 - 3498336
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||||| ||  ||||| |||| | || ||||||||||||||||||    
T  3498395 ttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 3498336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 10072581 - 10072648
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||| ||||| |||  ||||||||| | | ||||||||||||||| ||||||    
T  10072581 gggaaaacccgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggttttgttgccatgcct 10072648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 11032335 - 11032406
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| |||||||||||||||||||||| ||   |||| ||| || || |||||||||||||||||| ||||    
T  11032335 ttttatattcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacc 11032406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 17885580 - 17885647
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||| ||||| |||  | ||||||||| | ||||||||||||||| ||||||    
T  17885580 gggaaaacccgtcaaattgggtttggttcgggcaggtaaccacgggtatgggttttgttgccatgcct 17885647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 18825844 - 18825777
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||| ||||| ||| |||| ||||||  | ||||||||||||||| ||||||    
T  18825844 gggaaaacccgtcaaattgggtttggttcggacggttaaccatgggtatgggttttgttgccatgcct 18825777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 22106775 - 22106708
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaata 255  Q
    ||||| || ||||||||||||||||||| ||||  ||| || ||| || |||||||||||||||||||    
T  22106775 ttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaata 22106708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 24211652 - 24211593
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||||||||| ||||| |||  | || |||||| |||||||||||    
T  24211652 ttcattcaattaatgatgtatatgatccatattatgaaccacatacattattaattgaat 24211593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 35074585 - 35074652
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| ||| |||||| ||||| |||  ||||||||||| | ||||||||||||||| ||||||    
T  35074585 gggaaaacccgtctaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcct 35074652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 40529576 - 40529643
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaata 255  Q
    ||||| || ||||||||||||||||||| ||||  ||| || ||| || |||||||||||||||||||    
T  40529576 ttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaata 40529643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 46658840 - 46658769
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| |||||||||||||||||||||| ||  ||||| |||  || | |||||||||||||||||| ||||    
T  46658840 ttttagattcattcaattaatgatgtatgtgttccatattatgaattacatacatcattaattgaatgaacc 46658769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 48590693 - 48590622
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| ||||||||||||||||||||| |||  |||| ||| || || |||||||||||||| ||| ||||    
T  48590693 ttttaagttcattcaattaatgatgtatgtgattcatattatggaccacatacatcattaatttaatgaacc 48590622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 1706865 - 1706931
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| || ||||||||||||||||||| ||||  ||| || ||| ||||||||||||||| |||||    
T  1706865 ttttagatacattcaattaatgatgtatgtgacatataataaagaccatatacatcattaaatgaat 1706931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 3341997 - 3341932
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||| || |||||||||||||||||| ||| ||||| |||  | |||||||||||||||||||||    
T  3341997 ttttaagtttattcaattaatgatgtatgtgatccata-tatgaaccatatacatcattaattgaat 3341932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 21586922 - 21586864
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcatt 246  Q
    ||||| |||||||||||||||||||||||||| |  || |||||| || ||||||||||    
T  21586922 ttttagattcattcaattaatgatgtatatgatctttattatagaccacatacatcatt 21586864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 25079239 - 25079305
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| || ||||||||||||||||||| ||| || || ||||  ||| ||||||||||||||||||    
T  25079239 ttttagatacattcaattaatgatgtatgtgatccttattatatgtcacatacatcattaattgaat 25079305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 25079315 - 25079249
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| || ||||||||||||||||||| ||||  ||| ||  ||||| ||||||||||||||||||    
T  25079315 ttttagatacattcaattaatgatgtatgtgacatataataaggatcacatacatcattaattgaat 25079249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 27554529 - 27554595
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| || ||||||||||||||||||| ||| |  || |||| |||| ||||||||||||||||||    
T  27554529 ttttagatacattcaattaatgatgtatgtgatctttattatatatcacatacatcattaattgaat 27554595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 254
Target Start/End: Complemental strand, 27554601 - 27554539
Alignment:
Q  192 aaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||| ||||||||||||||||||| |||   ||| || |||||| ||||||||||||||||||    
T  27554601 aaatacattcaattaatgatgtatgtgatatataataaagatcacatacatcattaattgaat 27554539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 32389263 - 32389201
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaatt 250  Q
    ||||||||||||||||| |||||||||| |||  |||| |||| | || ||||||||||||||    
T  32389263 ttttaaattcattcaataaatgatgtatgtgattcatattataaaccacatacatcattaatt 32389201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 35593742 - 35593680
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    ||||||||||||||||||||| ||   |||| ||| || || |||||||||||||||||||||    
T  35593742 ttcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaataaa 35593680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 38238892 - 38238826
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| || ||||||||||||||||||| ||||  ||| || ||| || ||||||||||||||||||    
T  38238892 ttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaat 38238826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 24280929 - 24280900
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatat 217  Q
    ||||||||||||||||||||||||||||||    
T  24280929 ttttaaattcattcaattaatgatgtatat 24280900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 34703484 - 34703541
Alignment:
Q  197 cattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||||||||||||| || ||||  ||| || ||| |||||||||||||||||||||    
T  34703484 cattcaattaatgatgcatgtgacatataataaagaccatatacatcattaattgaat 34703541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 40416947 - 40417004
Alignment:
Q  197 cattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||||||||||||| || ||||  ||| || ||| |||||||||||||||||||||    
T  40416947 cattcaattaatgatgcatgtgacatataataaagaccatatacatcattaattgaat 40417004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 41888837 - 41888772
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaa 253  Q
    ||||||||||||||| |||||||||||||||   |||| ||| || || |||||||||||| ||||    
T  41888837 ttttaaattcattcatttaatgatgtatatggttcataatatggaccacatacatcattaaatgaa 41888772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 45985666 - 45985597
Alignment:
Q  190 ttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||| ||||||| |||||| | | ||||| ||| || | ||||||||||||||||||| ||||||||    
T  45985666 ttaaatttattcaataaatgatatttgtgacctataataaatatcatatacatcattaattaaataaacc 45985597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 45990026 - 45989957
Alignment:
Q  190 ttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||| ||||||| |||||| | | ||||| ||| || | ||||||||||||||||||| ||||||||    
T  45990026 ttaaatttattcaataaatgatatttgtgacctataataaatatcatatacatcattaattaaataaacc 45989957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 1565513 - 1565449
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||||||||| |||| ||| ||||| |||  | || |||||||||||||||||| ||||    
T  1565513 ttcattcaattaatgaagtatgtgatccatattatgaaccacatacatcattaattgaatgaacc 1565449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 1565451 - 1565515
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||   |||| ||| ||||| |||| ||||||||||||| ||||    
T  1565451 ttcattcaattaatgatgtatgtggttcataatatggatcacatacttcattaattgaatgaacc 1565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 3838232 - 3838156
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||| ||||||||||| ||| |||||| ||  | ||| |||| |||| |||||||||| ||||||| ||||    
T  3838232 ttgacttttagattcattcaatcaataatgtatttggtctataatataaatcacatacatcattgattgaatgaacc 3838156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 7780123 - 7780191
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcctg 121  Q
    ||||||| | |||||||||  ||||| ||| | |||||||||| | ||||||||||||||| |||||||    
T  7780123 gggaaaatccgtcaaattgagtttggttcggatgggtaaccacgggtatgggttttgttgccatgcctg 7780191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 17851978 - 17852034
Alignment:
Q  64 tcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| ||||| |||  ||||||||||||  ||||||||||||||| ||||||    
T  17851978 tcaaattgggtttggttcgggcgggtaaccacaagtatgggttttgttgccatgcct 17852034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 19531992 - 19532056
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||| |  | |||||||||||||||||| ||||    
T  19531992 ttcattcaattaatgatgtatgtggtccatattataaactacatacatcattaattgaatgaacc 19532056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 27940846 - 27940782
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| |||||||||||||| ||| ||||| |||  | || |||||||||||||||||| ||||    
T  27940846 ttcattgaattaatgatgtatgtgatccatattatgaaccacatacatcattaattgaatgaacc 27940782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 27940784 - 27940848
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||   |||| ||| ||||| |||||||||||||| ||| ||||    
T  27940784 ttcattcaattaatgatgtatgtggttcataatatggatcacatacatcattaattcaatgaacc 27940848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 35160788 - 35160852
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||   |||| |||||| || |||||||||| ||||||| ||||    
T  35160788 ttcattcaattaatgatgtatgtggttcatattatagaccaaatacatcattcattgaatgaacc 35160852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 37066221 - 37066285
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  | ||| ||| || || |||||||||||||||||| ||||    
T  37066221 ttcattcaattaatgatgtatgtggtctatattatggaccacatacatcattaattgaatgaacc 37066285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 40211179 - 40211255
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||| ||||||||||| |||||||||| ||    ||| ||||||||| ||||||| || ||||||| ||||    
T  40211179 ttgacttttagattcattcaatcaatgatgtatgtggtttatattatagatcacatacatctttgattgaatgaacc 40211255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 41741417 - 41741361
Alignment:
Q  64 tcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| ||||| |||  ||||||||| || |||||||||||||||| ||||||    
T  41741417 tcaaattgggtttggttcgggcgggtaaccgcaaatatgggttttgttgccatgcct 41741361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 54317234 - 54317326
Alignment:
Q  32 actcaaccccagtcaaacggagggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcctgccta 125  Q
    |||||| ||||||||||  | ||||||||| |||||||||||||||| |||  ||||||||||| ||||||| ||||||||| |||||||||||    
T  54317234 actcaaacccagtcaaaacg-gggaaaacccgtcaaattggatttggttcgggcgggtaaccacggatatggattttgttgccatgcctgccta 54317326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 39728781 - 39728848
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||| | |||||||||||||||| ||| |||||||||||| | ||||||||||||||| ||||||    
T  39728781 gggaaaatccgtcaaattggatttggttcggacgggtaaccacgggtatgggttttgttgccatgcct 39728848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 48390795 - 48390728
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||| | |||||||||||||||| |||||||||||||| | | ||||||||||||||| ||||||    
T  48390795 gggaaaatccgtcaaattggatttggttcgaacgggtaaccgcgggtatgggttttgttgccatgcct 48390728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 47334674 - 47334732
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcatt 246  Q
    ||||||||||||||||||||||||||||||||    || ||||||||||||||||||||    
T  47334674 ttttaaattcattcaattaatgatgtatatgatttttattatagatcatatacatcatt 47334732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 4182039 - 4181970
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    ||||| ||| ||||||| |||||||||||||| | ||| |||||| || |||||||||||||||||||||    
T  4182039 ttttagatttattcaatcaatgatgtatatgatctatattatagaccacatacatcattaattgaataaa 4181970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 254
Target Start/End: Original strand, 23783333 - 23783398
Alignment:
Q  189 tttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||||||||||||||  ||||| |||  | || ||||||||||||||||||    
T  23783333 tttaaattcattcaattaatgatgtatatggtccataatatgaaccacatacatcattaattgaat 23783398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 7933619 - 7933555
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||||| |||||||| ||| ||||| |||| || | |||||||||||||||||||||||    
T  7933619 ttcattcaattattgatgtatgtgatccatattataaatgacatacatcattaattgaataaacc 7933555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 4181973 - 4182032
Alignment:
Q  198 attcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    |||||||||||||||||| ||  | ||| |||||||||||||||||||| ||||||||||    
T  4181973 attcaattaatgatgtatgtggtctataatatagatcatatacatcattgattgaataaa 4182032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 7469756 - 7469689
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||| ||||| |||  ||||||||||| | ||||||||||||||| ||||||    
T  7469756 gggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcct 7469689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 21659170 - 21659241
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| ||||||||||||||||||||| |||  |||| |||||| || ||| |||||||||||||| ||||    
T  21659170 ttttaagttcattcaattaatgatgtatgtgattcataatatagaccacatatatcattaattgaatgaacc 21659241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 39655251 - 39655184
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||| ||||| |||  ||||||||||| | ||||||||||||||| ||||||    
T  39655251 gggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcct 39655184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 40504105 - 40504164
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||||| ||| ||||| |||| |||| |||||| |||||||||||    
T  40504105 ttcattcaattaatgatgtatgtgatccataatataaatcacatacattattaattgaat 40504164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 44639384 - 44639451
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||| ||| | ||| |||||||||||| |||||| |||||||||| ||||||    
T  44639384 gggaaaaccagtcaaattgggtttcgttcggacgggtaaccacggatatgagttttgttgccatgcct 44639451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 46739346 - 46739405
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||||||||   |||| ||||||||| |||||| |||||||||||    
T  46739346 ttcattcaattaatgatgtatatggttcataatatagatcacatacattattaattgaat 46739405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 19843950 - 19844016
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||||||||||||||||||||||||| ||||| ||| ||| || || |||||  |||||||||||    
T  19843950 ttttaaattcattcaattaatgatgtatctgacctatattatggaccacatacacgattaattgaat 19844016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 39530427 - 39530493
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||| ||||||||||||||||||||| ||   |||| |||||| || ||||||||||||||||||    
T  39530427 ttttaagttcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaat 39530493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 42449213 - 42449147
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||||| |||||||||||||||| || ||||  ||| || |||||| ||||||||||||||||||    
T  42449213 ttttaaatacattcaattaatgatgaatgtgacatataataaagatcacatacatcattaattgaat 42449147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 47334750 - 47334684
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| ||||||||| | |||||||||||||| | ||| || | |||||||||||||||||||||||    
T  47334750 ttttagattcattcattaaatgatgtatatgatctataataaaaatcatatacatcattaattgaat 47334684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 43582689 - 43582754
Alignment:
Q  55 gaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    |||||||  ||||||||||||||| |||  ||||||||| | ||||||||||||||||| ||||||    
T  43582689 gaaaacccatcaaattggatttggttcgggcgggtaaccgcggatatgggttttgttgcaatgcct 43582754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 47143322 - 47143391
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    |||||| |||||| |||||||||||||  |  | |||| ||||||||| |||||||||||||||||||||    
T  47143322 ttttaagttcatttaattaatgatgtacgtagctcatattatagatcacatacatcattaattgaataaa 47143391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 52638143 - 52638070
Alignment:
Q  186 acttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||| |||||||||||||||||||||| ||  | ||| |||| |||| |||||| ||||||||||| ||||    
T  52638143 acttttagattcattcaattaatgatgtatgtggtcgataatataaatcacatacattattaattgaatgaacc 52638070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 16127787 - 16127851
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||| | || |||||||||||||||||| ||||    
T  16127787 ttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaatgaacc 16127851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 1927533 - 1927604
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| |||||||| |||||||||||| ||  ||||| |||  |||| |||||||||||| ||||||||||    
T  1927533 ttttaagttcattcatttaatgatgtatgtggtccatattatgaatcacatacatcattaaatgaataaacc 1927604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 10371251 - 10371192
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttg 112  Q
    ||||||||| |||||||||| ||||| |||| ||||||||||| | | ||||||||||||    
T  10371251 gggaaaacccgtcaaattgggtttggttcgagcgggtaaccacgggtctgggttttgttg 10371192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 29076633 - 29076562
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| |||||||||||||||||||||| ||  ||||  |||| |||| ||| |||||||||||||| ||||    
T  29076633 ttttagattcattcaattaatgatgtatgtggtccatgatataaatcacatatatcattaattgaatgaacc 29076562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 32589347 - 32589418
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| |||||||||||||||||||||| ||   |||| ||| || || |||||||||||||||||| ||||    
T  32589347 ttttagattcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacc 32589418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 42758484 - 42758551
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||| | |||||||||| ||||| |||  ||||||||||| | ||||||||||||||| ||||||    
T  42758484 gggaaaatccgtcaaattgggtttggatcgggcgggtaaccacgggtatgggttttgttgccatgcct 42758551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 43898125 - 43898188
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattg 251  Q
    ||||| |||||||||||||||||||||||||  ||||| |||  | || |||||||||||||||    
T  43898125 ttttagattcattcaattaatgatgtatatggtccataatatgaaccacatacatcattaattg 43898188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 44953413 - 44953346
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||| ||||| |||| ||||||||||| | ||||  ||||||||| ||||||    
T  44953413 gggaaaacccgtcaaattgggtttggttcgagcgggtaaccacgggtatgaattttgttgccatgcct 44953346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 46739415 - 46739344
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| |||||||||||||| |||||| ||| | ||| |||  | ||||||||||||||||||||| ||||    
T  46739415 ttttaagttcattcaattaataatgtatgtgatctatattatgaaccatatacatcattaattgaatgaacc 46739344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 49580174 - 49580233
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttg 112  Q
    ||||||||| |||||||||||||||| |||  ||| ||||||| | ||||||||||||||    
T  49580174 gggaaaacccgtcaaattggatttggttcgggcggataaccacgggtatgggttttgttg 49580233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 52315498 - 52315431
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaata 255  Q
    ||||| || ||||||||||||||||||| ||||  ||| || ||| || |||||||||||||||||||    
T  52315498 ttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaata 52315431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 10872704 - 10872770
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||| | |||||||||| |||   ||| || ||| |||||||||||||||||||||    
T  10872704 ttttaaattcattcattaaatgatgtatgtgatttataataaagaccatatacatcattaattgaat 10872770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 16894209 - 16894271
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    |||||| |||||||| ||||| |||  |||| ||| ||||| |||||||||||||||||||||    
T  16894209 ttcatttaattaatggtgtatgtgattcatattatggatcacatacatcattaattgaataaa 16894271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 33412497 - 33412563
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| || ||||||||||||||||||| ||| | | | | ||||||| ||||||||||||||||||    
T  33412497 ttttagatacattcaattaatgatgtatgtgatctaaattttagatcacatacatcattaattgaat 33412563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 33412573 - 33412507
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| || ||||||||||||||||||| ||| | | | | ||||||| ||||||||||||||||||    
T  33412573 ttttagatacattcaattaatgatgtatgtgatctaaaatttagatcacatacatcattaattgaat 33412507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 34935577 - 34935639
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    ||||||||||||||||||||| ||  ||||| | |  |||| |||||||||||||||||||||    
T  34935577 ttcattcaattaatgatgtatgtggtccatattttgaatcacatacatcattaattgaataaa 34935639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 37897790 - 37897724
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||| | ||| |||||| ||  | ||| || |||||||||||||||||||||||||    
T  37897790 ttttaaattcattcattaaattatgtatgtggtctataataaagatcatatacatcattaattgaat 37897724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 39289593 - 39289655
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaatt 250  Q
    |||||| ||||||||||||||||||||| ||  ||||| |||| | ||| |||||||||||||    
T  39289593 ttttaagttcattcaattaatgatgtatgtggtccatattataaaccatttacatcattaatt 39289655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 41349696 - 41349758
Alignment:
Q  192 aaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||| ||||||||||||||||||| ||||  ||| || ||| || ||||||||||||||||||    
T  41349696 aaatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaat 41349758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 45736795 - 45736737
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcatt 246  Q
    ||||||||||||||||||||||||||| |||| |  || |||||| || ||||||||||    
T  45736795 ttttaaattcattcaattaatgatgtacatgatctttattatagaccacatacatcatt 45736737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 51165907 - 51165845
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaatt 250  Q
    |||||||| |||||||||||| || ||||||| | ||| |||||| || ||||||||||||||    
T  51165907 ttttaaatgcattcaattaataatttatatgatctatattatagaccacatacatcattaatt 51165845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 52931749 - 52931683
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| || ||||||||||||||||||| ||||  ||| || ||| || ||||||||||||||||||    
T  52931749 ttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaat 52931683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 3648807 - 3648738
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    ||||| ||||||||||| ||||||||||||   |  || ||||||  |||||||||||||||||||||||    
T  3648807 ttttacattcattcaatcaatgatgtatatagtctttattatagacaatatacatcattaattgaataaa 3648738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 23783399 - 23783342
Alignment:
Q  197 cattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||| ||   |||| ||| || |||||||||||||||||||||    
T  23783399 cattcaattaatgatgtatgtggttcatattatggaccatatacatcattaattgaat 23783342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 26121571 - 26121640
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    ||||| |||||||||||||||||||||||||  |  || |||||| || |||||||||| | ||||||||    
T  26121571 ttttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaataaa 26121640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 26244412 - 26244481
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    ||||| |||||||||||||||||||||||||  |  || |||||| || |||||||||| | ||||||||    
T  26244412 ttttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaataaa 26244481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 29284448 - 29284513
Alignment:
Q  55 gaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||| |||||||||| ||||| |||  ||||||||||| | |||| |||||||||| ||||||    
T  29284448 gaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgagttttgttgccatgcct 29284513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 40326476 - 40326541
Alignment:
Q  194 attcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||||||||||||||| ||   |||| |||| | || |||||||||||||||||| ||||    
T  40326476 attcattcaattaatgatgtatgtggttcatattataaaccacatacatcattaattgaatgaacc 40326541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 42595845 - 42595784
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaat 249  Q
    ||||| |||||||||||||||||||||| ||  ||||| |||| | || |||||||||||||    
T  42595845 ttttagattcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaat 42595784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 18480915 - 18480979
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| |||||||||||||| ||  ||||| |||| | || ||||||||||||||| |||||||    
T  18480915 ttcatttaattaatgatgtatgtggtccatattataaaccacatacatcattaattggataaacc 18480979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 19844020 - 19843960
Alignment:
Q  194 attcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||||||||||||  ||||| ||  ||||| ||||| ||| ||||||||||||||||||    
T  19844020 attcattcaattaatcgtgtatgtggtccataatataggtcagatacatcattaattgaat 19843960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 21403938 - 21403994
Alignment:
Q  198 attcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||||||||||||||| ||||  ||| || ||| || ||||||||||||||||||    
T  21403938 attcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaat 21403994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 33639015 - 33638951
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||| |||||||||||| ||  |||||||||  | ||||||||||||||| | ||||||||    
T  33639015 ttcattcatttaatgatgtatgtggtccatagtatgaaccatatacatcattaaatcaataaacc 33638951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 40504167 - 40504103
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||||||| |||||| |||   ||| ||| ||||| |||||||||||||||||| ||||    
T  40504167 ttcattcaattaataatgtatgtgatttatattatggatcacatacatcattaattgaatgaacc 40504103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 44435275 - 44435211
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||  | || |||||||||||||||||| ||||    
T  44435275 ttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaatgaacc 44435211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 44435213 - 44435277
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||   |||| ||| || || |||||||||||||||||| ||||    
T  44435213 ttcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaatgaacc 44435277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 51204517 - 51204577
Alignment:
Q  190 ttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaatt 250  Q
    ||||||||||| |||||||||||||| ||| ||||| |||  | || ||||||||||||||    
T  51204517 ttaaattcatttaattaatgatgtatgtgatccatattatgaaccacatacatcattaatt 51204577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 54690477 - 54690541
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| | |  | ||||||||| ||||||||||||||||    
T  54690477 ttcattcaattaatgatgtatgtggtccataatttgaaccatatacattattaattgaataaacc 54690541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 35907933 - 35907869
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| ||||||||||||||||||  ||||| |||||||||||||||||||||||||||| ||||    
T  35907933 ttcatacaattaatgatgtatatggtccataatatagatcatatacatcattaattgaatgaacc 35907869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 36441201 - 36441142
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcatta 247  Q
    |||||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||    
T  36441201 ttttaaattcattcaattaatgatgtatgtgacccatattataaaccatatacatcatta 36441142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 42480509 - 42480578
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    |||||||||||||||||||||||||||| |||  ||||||||  | ||||||||||||||||| ||||||    
T  42480509 ttttaaattcattcaattaatgatgtatgtgattcatagtatgaaccatatacatcattaattcaataaa 42480578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 12866530 - 12866470
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgc 113  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||  |||||||||||||||    
T  12866530 gggaaaacccgtcaaattggatttggttcggacgggtaaccacatgtatgggttttgttgc 12866470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 35172457 - 35172528
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||| |||||| ||||||||||||||||||||| ||||| ||| |||||| || |||||| |||||||||||    
T  35172457 ttgatttttaagttcattcaattaatgatgtatgtgacctataatatagaccacatacattattaattgaat 35172528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 18942025 - 18942089
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||||||   |||| |||||| || |||||||||||||||||| ||||    
T  18942025 ttcattcaattaatgatgtatatggttcataatatagaccacatacatcattaattgaatgaacc 18942089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 21152689 - 21152625
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||| |||| |||||||||||||||||| ||||    
T  21152689 ttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacc 21152625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 21159824 - 21159760
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||| |||| |||||||||||||||||| ||||    
T  21159824 ttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacc 21159760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 21163631 - 21163567
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||| |||| |||||||||||||||||| ||||    
T  21163631 ttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacc 21163567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 35907871 - 35907927
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattg 251  Q
    ||||||||||||||||||||||||| | ||| ||| || ||||||||||||||||||    
T  35907871 ttcattcaattaatgatgtatatgatctatattatggaccatatacatcattaattg 35907927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 14064918 - 14064847
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| |||||||||||||||||||||| |||  |||| ||| || || |||||||||||||||||| ||||    
T  14064918 ttttagattcattcaattaatgatgtatgtgattcataatatggaccacatacatcattaattgaatgaacc 14064847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 14416438 - 14416500
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaatt 250  Q
    ||||| |||||||||||||||||||||| ||  ||||| |||| |||| ||||||||||||||    
T  14416438 ttttagattcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaatt 14416500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 26300219 - 26300153
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| || ||||||||||||||||||||||||  ||| || ||| || ||||||||||||||||||    
T  26300219 ttttagatacattcaattaatgatgtatatgacatataataaagaccacatacatcattaattgaat 26300153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 34147973 - 34148043
Alignment:
Q  189 tttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| ||||||||||||||||| ||| |||  |||| ||||||||| |||||||||||||| ||| ||||    
T  34147973 tttaagttcattcaattaatgatatatttgattcataatatagatcacatacatcattaattaaatgaacc 34148043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 37944710 - 37944644
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| || ||||||||||||||||||| ||||  ||| || |||||| ||||||||||||||||||    
T  37944710 ttttagatacattcaattaatgatgtatgtgacatataataaagatcacatacatcattaattgaat 37944644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 4920938 - 4921003
Alignment:
Q  55 gaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||| |||||||||| ||||| |||  ||||||||||| | ||||||||||||||| ||||||    
T  4920938 gaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcct 4921003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 3161265 - 3161329
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||| ||||||| ||  ||||| |||| | ||||||||||||||||||||| ||||    
T  3161265 ttcattcaattaacgatgtatgtggtccatattataaaccatatacatcattaattgaatgaacc 3161329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 7336894 - 7336958
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||| | || |||||||||||||||||| ||||    
T  7336894 ttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaatgaacc 7336958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 13420473 - 13420537
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||||||| |||||| ||| ||||| |||| | ||||||||||||||||| ||| ||||    
T  13420473 ttcattcaattaataatgtatgtgatccataatataaaccatatacatcattaattaaatgaacc 13420537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 15966744 - 15966680
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||| | || |||||||||||||||||| ||||    
T  15966744 ttcattcaattaatgatgtatgtggtccataatataaaccacatacatcattaattgaatgaacc 15966680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 31787319 - 31787255
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||| ||||| |||  | || |||||||||||||||||| ||||    
T  31787319 ttcattcaattaatgatgtatgtgatccatattatgaaccacatacatcattaattgaatgaacc 31787255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 31947482 - 31947546
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattga 252  Q
    ||||| ||||||||||||||| |||||| ||   |||| ||| ||||||||||||||||||||||    
T  31947482 ttttagattcattcaattaattatgtatgtggttcatattatggatcatatacatcattaattga 31947546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 38860839 - 38860903
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||   |||| |||||| || |||||||||||||||||| ||||    
T  38860839 ttcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaacc 38860903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 219
Target Start/End: Complemental strand, 780766 - 780735
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatga 219  Q
    ||||||||||||||||||||||||||||||||    
T  780766 ttttaaattcattcaattaatgatgtatatga 780735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 12165316 - 12165387
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| ||||||| |||||||||||||| ||    ||| |||| ||||||||||||||||||||||| ||||    
T  12165316 ttttagattcatttaattaatgatgtatgtggtatataatataaatcatatacatcattaattgaatgaacc 12165387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 14064849 - 14064908
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||||| ||  ||||| |||  |||| ||||||||||||||||||    
T  14064849 ttcattcaattaatgatgtatgtggtccatattatgaatcacatacatcattaattgaat 14064908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 27990389 - 27990460
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| ||| ||||||||||||||||| ||   |||| ||||||| | |||||||||||||||||| ||||    
T  27990389 ttttaagttctttcaattaatgatgtatttggttcatattatagattacatacatcattaattgaatgaacc 27990460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 30996705 - 30996772
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||| | |||||||||| ||||| ||| |||| |||||  |||||||||||||||||| ||||||    
T  30996705 gggaaaatccgtcaaattgggtttggttcggacggataaccgtagatatgggttttgttgccatgcct 30996772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 31691005 - 31691076
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| |||||||| |||||||||||||||   |||| |||||| || |||||||||||| ||||| ||||    
T  31691005 ttttaagttcattcatttaatgatgtatatggttcatattatagaccagatacatcattaaatgaatgaacc 31691076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 31787257 - 31787316
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||||| ||   |||| ||| ||||| ||||||||||||||||||    
T  31787257 ttcattcaattaatgatgtatgtggttcataatatggatcacatacatcattaattgaat 31787316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 33727980 - 33727913
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||| | |||||||||| ||||| |||  ||||||||||| | ||||||||||||||| ||||||    
T  33727980 gggaaaatccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcct 33727913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 36137047 - 36137118
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| |||||||||||||||||||||| |   ||||| | || |||| |||||||||||||||||| ||||    
T  36137047 ttttagattcattcaattaatgatgtatgtagtccataatttaaatcacatacatcattaattgaatgaacc 36137118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 37637301 - 37637372
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| ||||||||||||||||||||| |||| |||| |||| |  | |||||| ||||||||||| ||||    
T  37637301 ttttaagttcattcaattaatgatgtatgtgactcataatataaactacatacattattaattgaatcaacc 37637372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 42717606 - 42717551
Alignment:
Q  56 aaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgtt 111  Q
    |||||| |||||||||| ||||| ||| |||||||||||||| |||| ||||||||    
T  42717606 aaaacccgtcaaattgggtttggttcggacgggtaaccacaggtatgagttttgtt 42717551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 1218845 - 1218895
Alignment:
Q  63 gtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgc 113  Q
    |||||||||||||||| |||| ||||||||| | | |||||||||||||||    
T  1218845 gtcaaattggatttggttcgagcgggtaaccgcgggtatgggttttgttgc 1218895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 3100437 - 3100503
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| ||||||||||| |||||||||| |   | ||| || |||||||||||||||||||||||||    
T  3100437 ttttagattcattcaataaatgatgtatgtagtctataataaagatcatatacatcattaattgaat 3100503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 3100513 - 3100447
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| |||||||||||||||||||||||||| |  || ||||||  | |||||||||| |||||||    
T  3100513 ttttagattcattcaattaatgatgtatatgatctttattatagactacatacatcatttattgaat 3100447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 12834553 - 12834495
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgtt 111  Q
    ||||||||| |||||||||  ||||| ||| |||||||||||||  |||||||||||||    
T  12834553 gggaaaacccgtcaaattgagtttggttcggacgggtaaccacatgtatgggttttgtt 12834495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 13157432 - 13157374
Alignment:
Q  197 cattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaata 255  Q
    ||||||||||||||||||| |||   ||| || ||| ||||||||||||||||||||||    
T  13157432 cattcaattaatgatgtatgtgatatataataaagaccatatacatcattaattgaata 13157374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 14571040 - 14571106
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| |||||||||||||||||||||| ||  ||||| |||  | || ||||||||||||||||||    
T  14571040 ttttagattcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaat 14571106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 14571116 - 14571050
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| |||||||||||||||||||||| ||   |||| ||| || || ||||||||||||||||||    
T  14571116 ttttagattcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaat 14571050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 15712153 - 15712219
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| || ||||||||||||||||||| ||||  ||| || ||| || ||||||||||||||||||    
T  15712153 ttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaat 15712219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 19531333 - 19531399
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| || ||||||||||||||||||| ||||  ||| || ||| || ||||||||||||||||||    
T  19531333 ttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaat 19531399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 40208509 - 40208579
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaac 258  Q
    |||||| ||||||||||||||||| ||| |||  |||| |||| | || ||| ||||||||||||||||||    
T  40208509 ttttaagttcattcaattaatgatatatgtgattcatattataaaccacatatatcattaattgaataaac 40208579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 42013930 - 42013864
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| || ||||||||||||||||||| ||||  ||| || ||| || ||||||||||||||||||    
T  42013930 ttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaat 42013864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 5243437 - 5243368
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    ||||||||||||||||||||| ||||||||||  |||  |||  | || |||||||||||||| ||||||    
T  5243437 ttttaaattcattcaattaattatgtatatgattcatcttatgaaccacatacatcattaattaaataaa 5243368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 254
Target Start/End: Complemental strand, 8961326 - 8961261
Alignment:
Q  189 tttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||| ||||||||||||||||||| ||||  ||| || ||| || |||||| |||||||||||    
T  8961326 tttaaatacattcaattaatgatgtatgtgacatataataaagaccacatacattattaattgaat 8961261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 11262427 - 11262370
Alignment:
Q  197 cattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||| ||||  ||| || ||| || ||||||||||||||||||    
T  11262427 cattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaat 11262370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 11786706 - 11786641
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaa 253  Q
    |||||| ||||||||||||| ||||||| ||  ||||  ||||||||| || ||||||||||||||    
T  11786706 ttttaagttcattcaattaaagatgtatgtggtccatgatatagatcacatgcatcattaattgaa 11786641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 21945422 - 21945479
Alignment:
Q  198 attcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaata 255  Q
    |||||||||||||||||| ||||  ||| || ||| || |||||||||||||||||||    
T  21945422 attcaattaatgatgtatgtgacatataataaagaccagatacatcattaattgaata 21945479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 32398111 - 32398082
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatat 217  Q
    ||||||||||||||||||||||||||||||    
T  32398111 ttttaaattcattcaattaatgatgtatat 32398082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 40905903 - 40905956
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaa 248  Q
    |||||||| |||||||||||| ||| ||||| ||| ||||| ||||||||||||    
T  40905903 ttcattcatttaatgatgtatgtgatccatattatggatcacatacatcattaa 40905956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 4162842 - 4162906
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||| |||||||||||||||   |||| |||||| || |||||||||||| ||||| ||||    
T  4162842 ttcattcatttaatgatgtatatggttcataatatagaccacatacatcattaaatgaatgaacc 4162906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 12891327 - 12891391
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||| |||||||||||| ||   |||| ||||||||| |||||||||||| ||||| ||||    
T  12891327 ttcattcatttaatgatgtatgtggttcataatatagatcacatacatcattaaatgaatgaacc 12891391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 13157375 - 13157431
Alignment:
Q  198 attcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||||||||||||||||||  |  || |||| |||| ||||||||||||||||||    
T  13157375 attcaattaatgatgtatatggtctttattatatatcacatacatcattaattgaat 13157431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 15966057 - 15965993
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||    ||| |||||| || |||||||||||||||||| ||||    
T  15966057 ttcattcaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatgaacc 15965993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 15965995 - 15966059
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  | ||| |||| | || |||||||||||||||||| ||||    
T  15965995 ttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaatgaacc 15966059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 16056846 - 16056782
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||| |||||||||||| ||   |||| ||| |||||||||||||||||| ||||| ||||    
T  16056846 ttcattcatttaatgatgtatgtggttcataatatggatcatatacatcattaaatgaatgaacc 16056782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 16056784 - 16056848
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||| |||||||||||||||| ||||| |||  | || |||||||||||| ||||| ||||    
T  16056784 ttcattcatttaatgatgtatatgatccatattatgaaccacatacatcattaaatgaatgaacc 16056848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 17096470 - 17096546
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||| ||||||||||| ||| |||||| ||| | ||| |||| | || |||||||||| ||||||| ||||    
T  17096470 ttgacttttagattcattcaatcaataatgtatttgatctataatataaaccacatacatcattgattgaatgaacc 17096546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 18942087 - 18942023
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  | ||| |||  | ||||||||||||||||||||| ||||    
T  18942087 ttcattcaattaatgatgtatgtggtctatattatgaaccatatacatcattaattgaatgaacc 18942023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 21152627 - 21152691
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| |||   ||| ||| || || |||||||||||||||||| ||||    
T  21152627 ttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatgaacc 21152691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 21159762 - 21159826
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| |||   ||| ||| || || |||||||||||||||||| ||||    
T  21159762 ttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatgaacc 21159826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 21163569 - 21163633
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| |||   ||| ||| || || |||||||||||||||||| ||||    
T  21163569 ttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatgaacc 21163633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 23118250 - 23118186
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||| ||||||||   |||| ||| || |||||| |||||||||||||| ||||    
T  23118250 ttcattcaattaatggtgtatatggttcataatatggaccatataaatcattaattgaatgaacc 23118186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 25773275 - 25773339
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattga 252  Q
    ||||| ||||||||| | |||||||||| ||| | ||| || ||| |||||||||||||||||||    
T  25773275 ttttagattcattcattaaatgatgtatttgatctataataaagaccatatacatcattaattga 25773339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 30778027 - 30778103
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||| ||||||||||||||| |||||| |   | ||| |||| |||| ||||||||||  |||||||||||    
T  30778027 ttgacttttagattcattcaattaataatgtatttagtctataatatatatcacatacatcattgtttgaataaacc 30778103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 34186456 - 34186392
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||  | || |||||||||||||||||| ||||    
T  34186456 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaacc 34186392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 34186394 - 34186458
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||   |||| ||| || || |||||||||||||||||| ||||    
T  34186394 ttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacc 34186458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 40905965 - 40905901
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| | |||||||||||| ||| ||||| ||| ||||| |||||||||||| ||||| ||||    
T  40905965 ttcatttatttaatgatgtatgtgatccataatatggatcacatacatcattaaatgaatgaacc 40905901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 43176290 - 43176354
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||| |||||||||||||||   |||| |||||| || |||||||||||| ||||| ||||    
T  43176290 ttcattcatttaatgatgtatatggttcatattatagaccagatacatcattaaatgaatgaacc 43176354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 42955141 - 42955075
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| ||| |||||||||||||||||||||| ||||| |||||||||||||| | |||||||||||    
T  42955141 ttttagatttattcaattaatgatgtatatgatccataatatagatcatatacgtaattaattgaat 42955075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 42955065 - 42955134
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    ||||| ||||||||||||||| | |||||||| | ||| ||| |||||||||||||||||||||||||||    
T  42955065 ttttagattcattcaattaattacgtatatgatctatattatggatcatatacatcattaattgaataaa 42955134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 37396231 - 37396307
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||| ||||||||||||||||||||||||||   ||| |||||| || |||||||||| ||||||| ||||    
T  37396231 ttgacttttagattcattcaattaatgatgtatatgatttatattatagaccacatacatcattgattgaatgaacc 37396307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 17844059 - 17843988
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| ||||||||||||||||||||| ||  ||||| |||| | ||||||||||||||||||||| ||||    
T  17844059 ttttaagttcattcaattaatgatgtatgtggtccatattataaaccatatacatcattaattgaatgaacc 17843988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 43514788 - 43514859
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| ||||||||||||||||||||| ||   |||| |||||| ||||||||||||||||||||| ||||    
T  43514788 ttttaagttcattcaattaatgatgtatgtggttcataatatagaccatatacatcattaattgaatgaacc 43514859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 921924 - 921858
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||| ||||||||||||||||||||| |   ||||| ||||||||| ||||||||||||||||||    
T  921924 ttttaagttcattcaattaatgatgtatctagtccataatatagatcacatacatcattaattgaat 921858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 4898266 - 4898202
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||| |||| |||||||||||||||||| ||||    
T  4898266 ttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacc 4898202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 4945660 - 4945596
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||| |||| |||||||||||||||||| ||||    
T  4945660 ttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacc 4945596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 24414110 - 24414050
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgc 113  Q
    ||||||||| |||||||||| ||||| |||  ||||||||||||| |||||||||||||||    
T  24414110 gggaaaacccgtcaaattgggtttggttcgggcgggtaaccacaggtatgggttttgttgc 24414050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 42263047 - 42263107
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaa 248  Q
    ||||||||||||||| |||||||||||| ||   |||| ||||||||||||||||||||||    
T  42263047 ttttaaattcattcatttaatgatgtatgtggttcataatatagatcatatacatcattaa 42263107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 10920749 - 10920816
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    |||||||||  ||||||||||||||| |||  ||||||||||| | ||||||||||||||| ||||||    
T  10920749 gggaaaacctatcaaattggatttggttcgggcgggtaaccacgggtatgggttttgttgccatgcct 10920816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 20195321 - 20195392
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| |||||||||||||||||||||| |||  |||| ||| || || |||||||||||||||||| ||||    
T  20195321 ttttagattcattcaattaatgatgtatgtgattcataatatggaccacatacatcattaattgaatgaacc 20195392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 20504351 - 20504284
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaata 255  Q
    ||||| || ||||||||||||||||||||| ||  ||| || |||| |||||||||||||||||||||    
T  20504351 ttttagatacattcaattaatgatgtatataacatataataaagattatatacatcattaattgaata 20504284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 30847057 - 30847124
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||| ||||| |||  ||||||||||| | ||||||||||||||| ||||||    
T  30847057 gggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcct 30847124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 37396317 - 37396246
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||  |||||||||| |||||||||| ||  | ||| |||| |||||||||||||||||||||||    
T  37396317 ttgacttttaggttcattcaatcaatgatgtatgtggtctataatataaatcatatacatcattaattgaat 37396246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 38721491 - 38721420
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| || ||| ||   |||| |||||| || |||||||||||||||||||||||    
T  38721491 ttttaaattcattcaattaataatttatgtggttcatattatagaccacatacatcattaattgaataaacc 38721420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 29771750 - 29771816
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| |||||||||||||||||||||| ||| ||||| |||  | || ||||||||||||||||||    
T  29771750 ttttagattcattcaattaatgatgtatgtgatccatattatgaaccacatacatcattaattgaat 29771816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 32346110 - 32346175
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| |||||||||||||||||||||||||  ||||| |||| || |||||||| |||||||||||    
T  32346110 ttttagattcattcaattaatgatgtatatg-tccataatataaattatatacattattaattgaat 32346175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 25668450 - 25668514
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||| ||||| |||| | || |||||||||||||| ||| ||||    
T  25668450 ttcattcaattaatgatgtatgtgatccatattataaaccacatacatcattaattaaatgaacc 25668514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 27327931 - 27327867
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| |||  |||| ||| || || |||||||||||||||||| ||||    
T  27327931 ttcattcaattaatgatgtatctgattcatattatggaccacatacatcattaattgaatgaacc 27327867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 27327869 - 27327933
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||  |||| |||||||||||||||||| ||||    
T  27327869 ttcattcaattaatgatgtatgtggtccataatatgaatcagatacatcattaattgaatgaacc 27327933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 42797976 - 42797912
Alignment:
Q  56 aaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    |||||| |||||||| ||||||| |||  ||||||||||| | ||||||||||||||| ||||||    
T  42797976 aaaacccgtcaaattagatttggttcgggcgggtaaccacgggtatgggttttgttgccatgcct 42797912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 2795342 - 2795413
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||| |||||||||||||| ||   |||| ||| || || |||||||||||||||||| ||||    
T  2795342 ttttaaattcatttaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacc 2795413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 219
Target Start/End: Original strand, 5762533 - 5762564
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatga 219  Q
    ||||||||||||||||||||||||||||||||    
T  5762533 ttttaaattcattcaattaatgatgtatatga 5762564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 13830846 - 13830905
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttg 112  Q
    ||||||||| |||||||||| ||||| |||  ||||||||||| | ||||||||||||||    
T  13830846 gggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttg 13830905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 17378163 - 17378092
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| ||||||||||||||||||||| ||   |||| | |||| || |||||||||||||||||| ||||    
T  17378163 ttttaagttcattcaattaatgatgtatgtggttcatattgtagaccacatacatcattaattgaatgaacc 17378092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 20195390 - 20195331
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||||| ||  ||||| |||  |||| ||||||||||||||||||    
T  20195390 ttcattcaattaatgatgtatgtggtccatattatgaatcacatacatcattaattgaat 20195331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 29771819 - 29771760
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||||| ||   |||| ||| ||||| ||||||||||||||||||    
T  29771819 ttcattcaattaatgatgtatgtggttcataatatggatcacatacatcattaattgaat 29771760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 36547373 - 36547444
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||| ||| |||||||||| ||| |  || ||||||||| |||||||||| ||||||| ||||    
T  36547373 ttttaaattcatttaataaatgatgtatgtgatctttaatatagatcacatacatcatttattgaatgaacc 36547444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 41823773 - 41823844
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||| |||||||||||||| |||   ||| |||||| || |||||||||||||| ||| ||||    
T  41823773 ttttaaattcatttaattaatgatgtatttgatttatattatagaccacatacatcattaattaaatgaacc 41823844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 800801 - 800731
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaac 258  Q
    ||||||||||||||| | |||||||||||||    ||| || | |||||||||||| ||||||||||||||    
T  800801 ttttaaattcattcattaaatgatgtatatggtttataataaaaatcatatacatcgttaattgaataaac 800731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 921848 - 921914
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| |||||||||||||||||||||| ||| | ||| ||| ||  | ||||||||||||||||||    
T  921848 ttttagattcattcaattaatgatgtatgtgatctatattatggactagatacatcattaattgaat 921914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 11726603 - 11726537
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| ||||||||| | |||||||||| ||| ||||| || |||| |||||||||||| |||||||    
T  11726603 ttttagattcattcattaaatgatgtatgtgatccataataaagattatatacatcattgattgaat 11726537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 19951553 - 19951499
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacat 242  Q
    ||||| |||||||||||||||||||||||||  |  || ||||||||||||||||    
T  19951553 ttttatattcattcaattaatgatgtatatgctctttattatagatcatatacat 19951499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 23377974 - 23378032
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcatt 246  Q
    ||||| |||||||||||||||||||||||||| |  || | ||||||| ||||||||||    
T  23377974 ttttagattcattcaattaatgatgtatatgatctttattgtagatcacatacatcatt 23378032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 30902305 - 30902371
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||||| ||||||||||||||||||| ||||  ||| || ||| || ||| ||||||||||||||    
T  30902305 ttttaaatacattcaattaatgatgtatgtgacatataataaagaccacatatatcattaattgaat 30902371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 218
Target Start/End: Original strand, 33555209 - 33555239
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatg 218  Q
    |||||||||||||||||||||||||||||||    
T  33555209 ttttaaattcattcaattaatgatgtatatg 33555239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 41805306 - 41805364
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcatt 246  Q
    ||||||||||||||||||||||||||||||   |  || |||||| |||||||||||||    
T  41805306 ttttaaattcattcaattaatgatgtatatagtctttattatagaccatatacatcatt 41805364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 3463251 - 3463198
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaa 248  Q
    |||||||| |||||||||||| ||| ||||| |||| |||| ||||||||||||    
T  3463251 ttcattcatttaatgatgtatgtgatccatattataaatcacatacatcattaa 3463198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 43701386 - 43701455
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    ||||| ||||||||| | |||||||| ||||||| | | || | | ||||||||||||||||||||||||    
T  43701386 ttttagattcattcattaaatgatgtgtatgacctacaataaaaaccatatacatcattaattgaataaa 43701455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 4637120 - 4637088
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtat 215  Q
    |||||||||| ||||||||||||||||||||||    
T  4637120 ttgacttttagattcattcaattaatgatgtat 4637088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 4898204 - 4898268
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| |||   ||| ||| || || |||||||||||||||||| ||||    
T  4898204 ttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatgaacc 4898268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 4945598 - 4945662
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| |||   ||| ||| || || |||||||||||||||||| ||||    
T  4945598 ttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatgaacc 4945662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 5144369 - 5144305
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| |||||||||||||| ||  ||||| |||| | || |||||||||||||||||| ||||    
T  5144369 ttcatttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaatgaacc 5144305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 9071232 - 9071264
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtat 215  Q
    |||||||||| ||||||||||||||||||||||    
T  9071232 ttgacttttagattcattcaattaatgatgtat 9071264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 9632500 - 9632564
Alignment:
Q  56 aaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    |||||| |||||||||  ||||| |||  ||||||||||| | ||||||||||||||| ||||||    
T  9632500 aaaacccgtcaaattgagtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcct 9632564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 9709759 - 9709695
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||| ||||||||||| ||  ||||| |||| | || |||||||||||||||||| ||||    
T  9709759 ttcattcaactaatgatgtatgtggtccatattataaaccacatacatcattaattgaattaacc 9709695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 14393228 - 14393159
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| ||| ||| ||||||||||||||||||  ||||||||||| || ||  |||||||||| ||||||||    
T  14393228 ttttagatttatttaattaatgatgtatatgattcatagtatagaccacat--atcattaattaaataaacc 14393159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 15178041 - 15178077
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatga 219  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  15178041 ttgacttttaagttcattcaattaatgatgtacatga 15178077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 21208993 - 21208929
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||| |||||||||||| ||  ||||| |||  | ||||||||||||||| ||||||||||    
T  21208993 ttcattcatttaatgatgtatgtggtccatattatgaaccatatacatcattaaatgaataaacc 21208929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 30202523 - 30202587
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||| |||||||||| |||  |||| ||||||  | |||||||||||||||||| ||||    
T  30202523 ttcattcaatcaatgatgtatgtgattcatattatagactacatacatcattaattgaatgaacc 30202587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 32070562 - 32070498
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||  | || |||||||||||||||||| ||||    
T  32070562 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaacc 32070498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 32070500 - 32070564
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||   |||| ||| || || |||||||||||||||||| ||||    
T  32070500 ttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacc 32070564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 33618236 - 33618300
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||| |||||||||||||||   |||| ||||||  | |||||||||||| ||||||||||    
T  33618236 ttcattcatttaatgatgtatatggttcataatatagactacatacatcattaaatgaataaacc 33618300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 34911199 - 34911135
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  | ||| |||  | || |||||||||||||||||||||||    
T  34911199 ttcattcaattaatgatgtatgtggtcgatattatgaaccacatacatcattaattgaataaacc 34911135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 37486100 - 37486040
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaata 255  Q
    ||||||||||||||||||||| ||   |||| ||| || || |||||||||||||||||||    
T  37486100 ttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaata 37486040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 10188058 - 10187986
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcctgccta 125  Q
    ||||||||| |||||||||| ||||| |||  ||||||||||| | ||||||||||||||| |||||||||||    
T  10188058 gggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcctgccta 10187986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 6047988 - 6048054
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| |||||||||||||||||||||| ||||||||| |||  | || ||||||||||||||||||    
T  6047988 ttttagattcattcaattaatgatgtatgtgacccataatatgaaccacatacatcattaattgaat 6048054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 2367447 - 2367503
Alignment:
Q  64 tcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| ||||| ||| |||||||||||| ||||||||||||||||| ||||||    
T  2367447 tcaaattgggtttggttcggacgggtaaccacggatatgggttttgttgccatgcct 2367503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 12141495 - 12141562
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| ||||||||| |||||| |||  |||||||||| || ||||||||||||||| ||||||    
T  12141495 gggaaaacccgtcaaattgaatttggttcgggcgggtaaccataggtatgggttttgttgccatgcct 12141562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 21478585 - 21478656
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| |||||||||||||||||||||| ||   |||| |||||| || |||||||||||||||||| ||||    
T  21478585 ttttagattcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaacc 21478656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 21506495 - 21506561
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| || ||||||||||||||||||| ||||  ||| || |||||| ||||||||||||||||||    
T  21506495 ttttagatacattcaattaatgatgtatgtgacatataataaagatcacatacatcattaattgaat 21506561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 2033282 - 2033206
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||| || ||||||||||||||||||||| || || ||| |||| | || | |||||||||||||||| ||||    
T  2033282 ttgactttcaagttcattcaattaatgatgtatttggcctataatatataccacaaacatcattaattgaatgaacc 2033206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 3212338 - 3212278
Alignment:
Q  199 ttcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||| ||  ||||| |||| |||| |||||||||||||||||| ||||    
T  3212338 ttcaattaatgatgtatgtggtccataatataaatcacatacatcattaattgaatgaacc 3212278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 27082407 - 27082439
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtat 215  Q
    |||||||||||||||||||||||||||||||||    
T  27082407 ttgacttttaaattcattcaattaatgatgtat 27082439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 219
Target Start/End: Original strand, 11637202 - 11637233
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatga 219  Q
    ||||||||||||||||||||||||||||||||    
T  11637202 ttttaaattcattcaattaatgatgtatatga 11637233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 27534794 - 27534861
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||  ||||| ||| |||| ||||||| | ||||||||||||||| ||||||    
T  27534794 gggaaaacccgtcaaattgagtttggttcggacggttaaccacgggtatgggttttgttgccatgcct 27534861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 30986363 - 30986430
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||  ||||| |||  ||||||||||| | ||||||||||||||| ||||||    
T  30986363 gggaaaacccgtcaaattgagtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcct 30986430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 31496544 - 31496611
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||  ||||| | | |||||||||||| | ||||||||||||||| ||||||    
T  31496544 gggaaaacccgtcaaattgagtttggtttggacgggtaaccacgggtatgggttttgttgccatgcct 31496611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 31501930 - 31501997
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| |||||||||  ||||| | | |||||||||||| | ||||||||||||||| ||||||    
T  31501930 gggaaaacccgtcaaattgagtttggtttggacgggtaaccacgggtatgggttttgttgccatgcct 31501997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 6048064 - 6047998
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| |||||||||||||||||||||| ||   |||| ||| | ||| ||||||||||||||||||    
T  6048064 ttttagattcattcaattaatgatgtatgtggttcatattatgggtcacatacatcattaattgaat 6047998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 15467605 - 15467671
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| ||||||| ||||| |||||||| ||| | ||| |||| |||| ||||||||||||||||||    
T  15467605 ttttagattcatttaattattgatgtatgtgatctatattataaatcacatacatcattaattgaat 15467671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 3773242 - 3773206
Alignment:
Q  222 catagtatagatcatatacatcattaattgaataaac 258  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  3773242 catattatggatcatatacatcattaattgaataaac 3773206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 4156378 - 4156442
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||| |||||||||||| ||  ||||| |||| ||||| ||||||||||| ||||| ||||    
T  4156378 ttcattcatttaatgatgtatgtggtccatattataaatcatgtacatcattaaatgaatgaacc 4156442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 5863361 - 5863301
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgc 113  Q
    ||||||||| |||||||||| ||||| |||  | ||||||||| | |||||||||||||||    
T  5863361 gggaaaacccgtcaaattgggtttggttcgggcaggtaaccacgggtatgggttttgttgc 5863301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 9908237 - 9908173
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| |||  |||| ||| || || |||||||||| ||||||| ||||    
T  9908237 ttcattcaattaatgatgtatgtgattcatattatggaccacatacatcattgattgaatgaacc 9908173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 9908175 - 9908239
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||| |||||||||| ||  ||||| |||  |||| |||||||||||||||||| ||||    
T  9908175 ttcattcaatcaatgatgtatgtggtccataatatgaatcacatacatcattaattgaatgaacc 9908239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 10731574 - 10731510
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||    ||| ||||||||| |||||||||||| ||||| ||||    
T  10731574 ttcattcaattaatgatgtatgtggtttataatatagatcacatacatcattaaatgaatgaacc 10731510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 10731512 - 10731576
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||| |||||||||||| ||| | ||| |||| | || |||||||||||||||||| ||||    
T  10731512 ttcattcatttaatgatgtatgtgatctatattataaaccacatacatcattaattgaatgaacc 10731576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 15467675 - 15467619
Alignment:
Q  194 attcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaatt 250  Q
    |||||||||||||||||||||| |||   ||| ||||||||| |||||||| |||||    
T  15467675 attcattcaattaatgatgtatgtgatttataatatagatcacatacatcaataatt 15467619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 32161665 - 32161601
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||| ||||||||||| ||  ||||| |||||| || ||||| |||||||||||| ||||    
T  32161665 ttcattcaaataatgatgtatgtggaccatattatagaccacatacaccattaattgaatgaacc 32161601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 32786217 - 32786153
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||  | || |||||||||||||||||| ||||    
T  32786217 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaacc 32786153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 32786155 - 32786219
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||   |||| ||| || || |||||||||||||||||| ||||    
T  32786155 ttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacc 32786219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 13145758 - 13145830
Alignment:
Q  183 ttgacttttaaattcattcaattaatga-tgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||| |||||||||||||||| ||||| ||| ||||| ||||||||| |||||| |||||||||||    
T  13145758 ttgacttttaagttcattcaattaatgaatgtatgtgagccataatatagatcacatacattattaattgaat 13145830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 35049959 - 35050030
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||  ||||||||||||||||||||| ||| | ||| |||| |||||||| ||||||||||||||    
T  35049959 ttgacttttaggttcattcaattaatgatgtatgtgatctatattataaatcatatatatcattaattgaat 35050030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 35050033 - 35049969
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||| |||||||   ||| ||||||||| |||||||||||||||||| ||||    
T  35050033 ttcattcaattaatgatatatatgatttataatatagatcacatacatcattaattgaatgaacc 35049969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 17310450 - 17310521
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| ||||||||||||||||||||||||  | ||| || | |||||||| |||||||||||||| ||||    
T  17310450 ttttaagttcattcaattaatgatgtatatggtctataatacaaatcatatatatcattaattgaatgaacc 17310521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 26059227 - 26059156
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| ||||||||||||||||| ||| ||  ||||| |||| | ||||||||||||||||||||| ||||    
T  26059227 ttttaagttcattcaattaatgatttatgtggtccatattataaaccatatacatcattaattgaatgaacc 26059156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 52253646 - 52253580
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||||||||| || |   ||||| |||| |||| ||||||||||||||||||    
T  52253646 ttttaaattcattcaattaatgatgcatgtagtccatattataaatcacatacatcattaattgaat 52253580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 52879916 - 52879982
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| |||||||||||||||||||||| ||  ||||| ||| || || ||||||||||||||||||    
T  52879916 ttttagattcattcaattaatgatgtatgtggaccatattatggaccacatacatcattaattgaat 52879982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 1597297 - 1597228
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    ||||||||| ||||| | |||||| ||||||  | ||| || ||||||||||||||||||||||||||||    
T  1597297 ttttaaatttattcattaaatgatatatatggtcgataataaagatcatatacatcattaattgaataaa 1597228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 2091847 - 2091783
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||||||| |||||| |||  |||| ||| || ||||||||||||||||||||| ||||    
T  2091847 ttcattcaattaatcatgtatgtgattcatattattgaccatatacatcattaattgaatgaacc 2091783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 28298056 - 28298116
Alignment:
Q  52 agggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttg 112  Q
    |||||||||| |||||||||||||||| |||   |||||||||| |||||| |||||||||    
T  28298056 agggaaaacccgtcaaattggatttggttcgggtgggtaaccacggatatgagttttgttg 28298116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 47011283 - 47011347
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||| ||| ||  ||||| |||| |||| |||||||||||||||||| ||||    
T  47011283 ttcattcaattaatgatatatgtggtccatattataaatcacatacatcattaattgaatgaacc 47011347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 48605171 - 48605107
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| |||  |||| ||| || || |||||||||||||||||| ||||    
T  48605171 ttcattcaattaatgatgtatgtgattcatattatggaccacatacatcattaattgaatgaacc 48605107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 48605109 - 48605173
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||  |||| |||||||||||||||||| ||||    
T  48605109 ttcattcaattaatgatgtatgtggtccataatatgaatcacatacatcattaattgaatgaacc 48605173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 4682969 - 4683040
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| ||| |||||||||||||||||| ||   |||| |||||| || |||||||||||||||||| ||||    
T  4682969 ttttagatttattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaacc 4683040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 5181150 - 5181217
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcct 120  Q
    ||||||||| ||||||||| |||||| |||  ||||||||| | | ||||||||||||||| ||||||    
T  5181150 gggaaaacccgtcaaattgaatttggttcgggcgggtaaccgcgggtatgggttttgttgccatgcct 5181217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 219
Target Start/End: Complemental strand, 9590852 - 9590821
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatga 219  Q
    ||||||||||||||||||||||||||||||||    
T  9590852 ttttaaattcattcaattaatgatgtatatga 9590821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 12447562 - 12447495
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaata 255  Q
    ||||| |||||||||||||||||||||| ||| ||||| |||  | || | |||||||||||||||||    
T  12447562 ttttagattcattcaattaatgatgtatgtgatccataatatgaaccacaaacatcattaattgaata 12447495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 17310519 - 17310460
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||| |||||||    || |||||| |||||||||||||||||||||    
T  17310519 ttcattcaattaatgatatatatgatttgtattatagaccatatacatcattaattgaat 17310460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 27549077 - 27549148
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||| ||||||||||||||||||||| ||  ||||| |||  | || |||||||||||||||||| ||||    
T  27549077 ttttaagttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaatgaacc 27549148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 29936533 - 29936592
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttg 112  Q
    ||||||||| |||||||||| ||||| |||  ||||||||||| | ||||||||||||||    
T  29936533 gggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttg 29936592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 34598893 - 34598960
Alignment:
Q  187 cttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||| |||||||||| ||||||||||| ||   |||| |||  |||||||||||||||||||||||    
T  34598893 cttttagattcattcaaataatgatgtatgtggttcataatatgaatcatatacatcattaattgaat 34598960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 37255158 - 37255229
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||| |||||||||||||||||||||| ||  ||||| |||  | || |||||||||||||||||| ||||    
T  37255158 ttttagattcattcaattaatgatgtatgtggtccatattattaaccacatacatcattaattgaatgaacc 37255229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 38824330 - 38824389
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||||| ||   |||| |||||| || ||||||||||||||||||    
T  38824330 ttcattcaattaatgatgtatgtggttcataatatagaccacatacatcattaattgaat 38824389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 219
Target Start/End: Original strand, 45010870 - 45010901
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatga 219  Q
    ||||||||||||||||||||||||||||||||    
T  45010870 ttttaaattcattcaattaatgatgtatatga 45010901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 50550154 - 50550209
Alignment:
Q  191 taaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcatt 246  Q
    |||||||||||||||||| |||||||||| |  || ||||||||| ||||||||||    
T  50550154 taaattcattcaattaataatgtatatgatctttattatagatcacatacatcatt 50550209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 3384255 - 3384321
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| || ||||||||||||||||||| ||||  ||| || |||||| ||||||||| ||||||||    
T  3384255 ttttagatacattcaattaatgatgtatgtgacatataataaagatcacatacatcatcaattgaat 3384321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 218
Target Start/End: Complemental strand, 11324541 - 11324511
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatg 218  Q
    |||||||||||||||||||||||||||||||    
T  11324541 ttttaaattcattcaattaatgatgtatatg 11324511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 218
Target Start/End: Complemental strand, 11482562 - 11482532
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatg 218  Q
    |||||||||||||||||||||||||||||||    
T  11482562 ttttaaattcattcaattaatgatgtatatg 11482532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 218
Target Start/End: Complemental strand, 26674294 - 26674264
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatg 218  Q
    |||||||||||||||||||||||||||||||    
T  26674294 ttttaaattcattcaattaatgatgtatatg 26674264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 31998297 - 31998239
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcatt 246  Q
    ||||| ||||||||| |||||||||||||||| |  || ||||||||| ||||||||||    
T  31998297 ttttagattcattcatttaatgatgtatatgatctttattatagatcacatacatcatt 31998239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 34598970 - 34598904
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| ||||||||||||||||||||||||||  |||| |||  | || ||||||||||| ||||||    
T  34598970 ttttagattcattcaattaatgatgtatatgattcatattatgaaccacatacatcattatttgaat 34598904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 34953928 - 34953994
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||| | |||||||||| ||  | ||| || ||| |||||||||||||||||||||    
T  34953928 ttttaaattcattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaat 34953994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 47293282 - 47293344
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaatt 250  Q
    ||||| |||||||||||||||||||||| ||   |||| ||| ||||| ||||||||||||||    
T  47293282 ttttagattcattcaattaatgatgtatgtggttcatattatggatcacatacatcattaatt 47293344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 50550227 - 50550161
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||| ||||||||| | |||||||||| ||| | ||| || ||||||||||||| |||||||||||    
T  50550227 ttttagattcattcattaaatgatgtatgtgatctataataaagatcatatacattattaattgaat 50550161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 1597221 - 1597290
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    ||||||||| |||||||||||||||||||||| |  || ||| || |||||| |||||| | ||||||||    
T  1597221 ttttaaatttattcaattaatgatgtatatgatctttattatcgaccatatatatcatttaatgaataaa 1597290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 19572490 - 19572425
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgc 118  Q
    ||||||||| |||||||| | ||||| |||  ||||||||||||  ||||||||||||||| ||||    
T  19572490 gggaaaacccgtcaaattaggtttggttcgggcgggtaaccacaagtatgggttttgttgccatgc 19572425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 31634434 - 31634495
Alignment:
Q  198 attcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||||||||||| ||  ||||| |||| |||| ||||| |||||||||||| ||||    
T  31634434 attcaattaatgatgtatgtggtccatattataaatcacatacaacattaattgaattaacc 31634495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 34611184 - 34611253
Alignment:
Q  53 gggaaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttgctatgcctgc 122  Q
    ||||||||| |||||||||||||||| ||   ||||||||||| | ||||| ||||||||  ||||||||    
T  34611184 gggaaaacccgtcaaattggatttggttcaggcgggtaaccacgggtatggattttgttgtcatgcctgc 34611253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 47991816 - 47991869
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaa 248  Q
    |||||||| |||||||||||| ||  ||||| ||||||||| ||||||||||||    
T  47991816 ttcattcatttaatgatgtatgtggtccataatatagatcacatacatcattaa 47991869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 50503291 - 50503222
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    ||||| ||||||| | | |||||||||| ||  | ||| || ||||||||||||||||||||||||||||    
T  50503291 ttttatattcatttattaaatgatgtatgtggtctataataaagatcatatacatcattaattgaataaa 50503222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 2091785 - 2091849
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||||||  | ||| |||  |||| |||||| ||||||||||| ||||    
T  2091785 ttcattcaattaatgatgtatatggtcaataatatgaatcacatacatgattaattgaatgaacc 2091849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 12993563 - 12993623
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaata 255  Q
    ||||||||||||||||||||| ||   |||| ||| || || |||||||||||||||||||    
T  12993563 ttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaata 12993623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 15278666 - 15278602
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||    ||| ||||||||| |||||||||||| ||||| ||||    
T  15278666 ttcattcaattaatgatgtatgtggtttataatatagatcacatacatcattaaatgaatgaacc 15278602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 15278604 - 15278668
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||| |||||||||||| ||| | ||| |||| | || |||||||||||||||||| ||||    
T  15278604 ttcattcatttaatgatgtatgtgatctatattataaaccacatacatcattaattgaatgaacc 15278668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 21852538 - 21852474
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||| ||||| |||  | || ||| |||||||||||||| ||||    
T  21852538 ttcattcaattaatgatgtatgtgatccataatatgaaccacatatatcattaattgaatgaacc 21852474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 21852476 - 21852540
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||| ||| ||   |||| ||| ||||| |||||||||||||||||| ||||    
T  21852476 ttcattcaattaatgatatatgtggttcatattatggatcacatacatcattaattgaatgaacc 21852540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 25378296 - 25378360
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||   |||| ||| || || |||||||||||||||||| ||||    
T  25378296 ttcattcaattaatgatgtatgtggttcataatattgaccacatacatcattaattgaatgaacc 25378360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 31327606 - 31327670
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||| |||||||||||||||   |||| |||||| || |||||||||||| ||||| ||||    
T  31327606 ttcattcatttaatgatgtatatggttcataatatagaccacatacatcattaaatgaatgaacc 31327670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 31909850 - 31909786
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||    ||| |||||| || |||||||||||||||||| ||||    
T  31909850 ttcattcaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatgaacc 31909786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 31909788 - 31909852
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  | ||| |||| | || |||||||||||||||||| ||||    
T  31909788 ttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaatgaacc 31909852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 34038021 - 34037957
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||   |||| |||||| || ||||||| |||||||||| ||||    
T  34038021 ttcattcaattaatgatgtatgtggttcatattatagaccacatacatcgttaattgaatgaacc 34037957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 39015664 - 39015600
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||   |||| ||| || || |||||||||||||||||| ||||    
T  39015664 ttcattcaattaatgatgtatgtggttcataatattgaccacatacatcattaattgaatgaacc 39015600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 40960852 - 40960776
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||| ||||||||||| ||| |||||| ||| | ||| |||| | |||||| |||||| ||||||| ||||    
T  40960852 ttgacttttagattcattcaatcaataatgtatttgatctataatataaaccatatatatcattgattgaatgaacc 40960776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 40988450 - 40988402
Alignment:
Q  208 tgatgtatatgacccatagtatagatcatatacatcattaattgaataa 256  Q
    |||||||| ||| | ||| || |||||||||||||||||||||||||||    
T  40988450 tgatgtatctgatctataataaagatcatatacatcattaattgaataa 40988402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 42914568 - 42914628
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaa 248  Q
    ||||| ||||||||| |||||||||||||||| ||||| |||  | || ||||||||||||    
T  42914568 ttttagattcattcatttaatgatgtatatgatccatattatgaaccacatacatcattaa 42914628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 50998405 - 50998341
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||||||||||||||||   ||||| |||  | || |||||||||||||||||| ||||    
T  50998405 ttcattcaattaatgatgtatatagtccataatatgaaccaaatacatcattaattgaatgaacc 50998341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 50998343 - 50998407
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||   |||| ||| ||  |||||||||||||||||||| ||||    
T  50998343 ttcattcaattaatgatgtatttggttcatattatggactatatacatcattaattgaatgaacc 50998407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 52879986 - 52879926
Alignment:
Q  194 attcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    |||||||||||||||||||||| ||  ||||| ||| |  || ||||||||||||||||||    
T  52879986 attcattcaattaatgatgtatgtggtccataatatggtccacatacatcattaattgaat 52879926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 11623 - 11687
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  ||||| |||||| || |||||||||||||||||| ||||    
T  11623 ttcattcaattaatgatgtatgtggtccatattatagaccacatacatcattaattgaatgaacc 11687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 11685 - 11621
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||| ||  | ||| ||| || || |||||||||||||||||| ||||    
T  11685 ttcattcaattaatgatgtatgtggtctataatatggaccacatacatcattaattgaatgaacc 11621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 108077 - 108041
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatga 219  Q
    |||||||||||||||||||||||||||||||||||||    
T  108077 ttgacttttaaattcattcaattaatgatgtatatga 108041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 491882 - 491942
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaa 248  Q
    ||||||||||||||| |||||||||||| ||   |||| ||||||||||||||||||||||    
T  491882 ttttaaattcattcatttaatgatgtatgtggttcataatatagatcatatacatcattaa 491942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 89706 - 89648
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcatt 246  Q
    ||||||||| |||||||||||||||||||||| |  || ||||||||| ||||||||||    
T  89706 ttttaaatttattcaattaatgatgtatatgatctttattatagatcacatacatcatt 89648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 89630 - 89699
Alignment:
Q  188 ttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaa 257  Q
    ||||| |||| |||| | |||||||||| ||| | ||| || ||||||||||||||||||||||||||||    
T  89630 ttttagattctttcattaaatgatgtatgtgatctataataaagatcatatacatcattaattgaataaa 89699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 54487 - 54430
Alignment:
Q  197 cattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaat 254  Q
    ||||||||||||||||||| ||  || || |||| |||||||||||||||||||||||    
T  54487 cattcaattaatgatgtatgtggtccttattatatatcatatacatcattaattgaat 54430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 63477 - 63541
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||||||||||||||||||| ||||| ||||||  || ||| ||||||||| ||| ||||    
T  63477 ttcattcaattaatgatgtatatgatccatattatagacaatgtacgtcattaattaaatgaacc 63541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 215
Target Start/End: Complemental strand, 38427 - 38398
Alignment:
Q  186 acttttaaattcattcaattaatgatgtat 215  Q
    ||||||||||||||||||||||||||||||    
T  38427 acttttaaattcattcaattaatgatgtat 38398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 38046 - 38110
Alignment:
Q  195 ttcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    ||||||||| ||||||||||| ||   |||| |||||| || |||||||||||||||||| ||||    
T  38046 ttcattcaactaatgatgtatgtggttcataatatagaccacatacatcattaattgaatgaacc 38110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0756 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0756
Description:

Target: scaffold0756; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 3545 - 3621
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||| ||||||||||| |||||||||| ||    ||| |||||| || |||||||||| ||||||| ||||    
T  3545 ttgacttttagattcattcaatcaatgatgtatgtggtttatattatagaccacatacatcattgattgaatgaacc 3621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 3527 - 3451
Alignment:
Q  183 ttgacttttaaattcattcaattaatgatgtatatgacccatagtatagatcatatacatcattaattgaataaacc 259  Q
    |||||||||| ||||||||||| |||||||||| ||    ||| |||||| || |||||||||| ||||||| ||||    
T  3527 ttgacttttagattcattcaatcaatgatgtatgtggtttatattatagaccacatacatcattgattgaatgaacc 3451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 10403 - 10459
Alignment:
Q  56 aaaaccggtcaaattggatttgggtcgaacgggtaaccacagatatgggttttgttg 112  Q
    |||||| |||||||||||||||| ||| || ||||||| ||  ||||||||||||||    
T  10403 aaaacccgtcaaattggatttggttcggacaggtaaccgcatgtatgggttttgttg 10459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University