View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1304_low_112 (Length: 291)
Name: NF1304_low_112
Description: NF1304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1304_low_112 |
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Alignment Details
Target: chr7 (Bit Score: 129; Significance: 8e-67; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 57 - 235
Target Start/End: Original strand, 26022810 - 26022986
Alignment:
| Q |
57 |
aaaaagtgaagttccagccgcggaatcaaagttaagtgttttggatccgtgttggaacttggaacgcatgacactatgaannnnnnnnncttttcgcatg |
156 |
Q |
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| T |
26022810 |
aaaaagtgaagttccagccgcggaaccaaagttaagtgttttggatccgtgttggaacttggaacgcatgacact--gaatttttttttcttttcgcatg |
26022907 |
T |
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| Q |
157 |
ggcatggtcgtaagcgggctaggaaacccattttcgttgaggggaaggatgaagaccaaattcaaaccatgagaagcaa |
235 |
Q |
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||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26022908 |
ggcatggccgtaagcgggctaggaaacccgttttcgttgaggggaaggatgaagaccaaattcaaaccatgagaagcaa |
26022986 |
T |
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