View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1304_low_140 (Length: 251)
Name: NF1304_low_140
Description: NF1304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1304_low_140 |
 | |
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| [»] chr1 (3 HSPs) |
| |
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| [»] chr2 (9 HSPs) |
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| [»] chr7 (32 HSPs) |
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| [»] chr4 (6 HSPs) |
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| [»] chr8 (2 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 4679096 - 4678846
Alignment:
| Q |
1 |
cattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
4679096 |
cattcttaaaaccttcgctcaaaatagcagcttggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaa |
4678997 |
T |
|
| Q |
101 |
aaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaaga |
200 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4678996 |
aaagtcttgcaatagatcctgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatattactcccgcgcatctttgaatcactaaga |
4678897 |
T |
|
| Q |
201 |
caactcttaacagtttccatacactcgttgaaaaggtccatattaatttcc |
251 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4678896 |
caactcttaacagtttccatacactcgttgaaaaggtccatattaatttcc |
4678846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 15594663 - 15594815
Alignment:
| Q |
1 |
cattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaa |
100 |
Q |
| |
|
|||| ||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||| | || || |
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|
| T |
15594663 |
catttttaaaaccttcactcaacaaagcagcctggacagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaattcctttccctcgaa |
15594762 |
T |
|
| Q |
101 |
aaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaa |
153 |
Q |
| |
|
||| || | |||||| | |||||||||||||||||| || || ||||| |||| |
|
|
| T |
15594763 |
aaaatccttcaatagttgttgcactttgggaatcctagaagacccaccaacaa |
15594815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 34467327 - 34467163
Alignment:
| Q |
1 |
cattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaa |
100 |
Q |
| |
|
|||| ||||| |||| ||||| | |||||| || | |||||| ||||||| ||||||||||| |||||||| || ||||| | |||||| | || || |
|
|
| T |
34467327 |
cattgttaaagcctttactcaacaaagcagcttgcacagctgcgacataagcgacagcctcatcagggttgatgctattgcatagatccttaccattgaa |
34467228 |
T |
|
| Q |
101 |
aaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
165 |
Q |
| |
|
|||||| ||||||| | ||||||||||||||||| || || || || ||||| ||| |||||| |
|
|
| T |
34467227 |
aaagtcccgcaatagctgctgcactttgggaatcctagaagagcccccgacaaggacagcatcat |
34467163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 139; Significance: 8e-73; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 16658056 - 16657806
Alignment:
| Q |
1 |
cattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaa |
100 |
Q |
| |
|
|||||||||| ||||| |||||||||||||| || | ||||||||| ||||||||||| ||||| ||||||||||| ||||| |||||||| | ||| || |
|
|
| T |
16658056 |
cattcttaaagccttcactcaaaatagcagcttgaacagctgcaccgtaagcaacagcttcatccgggttgatacttttgcataaatccttgcccttgaa |
16657957 |
T |
|
| Q |
101 |
aaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaaga |
200 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| | ||||||||||||||| |||| |
|
|
| T |
16657956 |
aaagtcttgcaatagatcctgcactttgggaatcctagatgagccacccacaagaacaacgtcatcaatatcaccaatgtgcatctttgaatcacgaaga |
16657857 |
T |
|
| Q |
201 |
caactcttaacagtttccatacactcgttgaaaaggtccatattaatttcc |
251 |
Q |
| |
|
||| ||| |||||||| ||||||||| |||||||| ||||||||||||||| |
|
|
| T |
16657856 |
caattctcaacagttttcatacactcattgaaaagatccatattaatttcc |
16657806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 43625041 - 43625290
Alignment:
| Q |
1 |
cattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaa |
100 |
Q |
| |
|
||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||| || || | ||| | ||||||| ||| || |
|
|
| T |
43625041 |
cattcttaatgcctttactcaaaatagcagcctggacagctgcaccataagcaacagcctcatcagggtttatgctttcgcatgattccttccccttgaa |
43625140 |
T |
|
| Q |
101 |
aaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaaga |
200 |
Q |
| |
|
||| || ||||| || | || ||||| ||||| || || || || || ||||| |||||||| | ||| ||||| | || ||| | |||| ||||| |
|
|
| T |
43625141 |
aaactcctgcaacagctgttttacttttggaattctagaggagccgccaacaaggacaacatcgtggatagcactcttgtccaacttggcatcaataaga |
43625240 |
T |
|
| Q |
201 |
caactcttaacagtttccatacactcgttgaaaaggtccatattaatttc |
250 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||| |||||||| ||||| |
|
|
| T |
43625241 |
caactcttaacagttttcaaacactcgttgaaaagatccatatttatttc |
43625290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 11999037 - 11999201
Alignment:
| Q |
1 |
cattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaa |
100 |
Q |
| |
|
||||||||| | |||| ||||| | |||||| || | |||||| |||||||| ||||||||||| ||||| || ||||||||||| ||||||| || || |
|
|
| T |
11999037 |
cattcttaacatcttcactcaacaaagcagcttgaacagctgccccataagctacagcctcatcagggttaatgctcttgcacaactccttcccgttgaa |
11999136 |
T |
|
| Q |
101 |
aaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
166 |
Q |
| |
|
|||||| || ||||| | ||| |||||||| ||||| || || ||||| ||||| ||||||||||| |
|
|
| T |
11999137 |
aaagtcatgtaatagctgttggactttggg-atcctagaagatccaccaacaagtacaacatcatc |
11999201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 12245945 - 12245780
Alignment:
| Q |
1 |
cattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaa |
100 |
Q |
| |
|
||||||||| | ||| ||||| | |||||| || | |||||| ||||||||||||||||| || ||||| || ||||||||||| ||||||| || || |
|
|
| T |
12245945 |
cattcttaacatctttactcaacaaagcagcttgaacagctgccccataagcaacagcctcgtcagggttaatgctcttgcacaattccttcccgttgaa |
12245846 |
T |
|
| Q |
101 |
aaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
166 |
Q |
| |
|
|||||| || ||||| | ||| |||||||||||||| || || ||||| ||||| |||| |||||| |
|
|
| T |
12245845 |
aaagtcctgtaatagctgttggactttgggaatcctagaagatccaccaacaagtacaaaatcatc |
12245780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 16662520 - 16662282
Alignment:
| Q |
12 |
ccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgca |
111 |
Q |
| |
|
||||| ||||| | |||||| || | |||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||| || || |||| ||| |
|
|
| T |
16662520 |
ccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaagttacgca |
16662421 |
T |
|
| Q |
112 |
atagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaac |
211 |
Q |
| |
|
||| || |||||||| |||||||| || || || || |||||||||| ||||| | | | | | | |||||||||||| || |||||||| ||| |
|
|
| T |
16662420 |
ataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccccttgtccatctttgaatccacaaaacaactctcaac |
16662321 |
T |
|
| Q |
212 |
agtttccatacactcgttgaaaaggtccatattaatttc |
250 |
Q |
| |
|
| | | |||||||||||| |||||| ||||||| ||||| |
|
|
| T |
16662320 |
aatcttcatacactcgttaaaaaggcccatattgatttc |
16662282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 14703049 - 14703202
Alignment:
| Q |
13 |
cttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaa |
112 |
Q |
| |
|
|||| ||||| | ||||||||| | |||||| |||||||| ||||| ||||| ||||| || || |||||||| ||||||| || |||||||| || || |
|
|
| T |
14703049 |
cttcactcaacaaagcagcctgaacagctgccccataagctacagcttcatcagggttaatgctgttgcacaactccttcccctggaaaaagtcctgtaa |
14703148 |
T |
|
| Q |
113 |
tagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
166 |
Q |
| |
|
|| | || ||||||||||||| || || ||||| ||||||||||||||||| |
|
|
| T |
14703149 |
taattgctgtactttgggaatccgagaagacccaccgacaagaacaacatcatc |
14703202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 166
Target Start/End: Complemental strand, 12259095 - 12258955
Alignment:
| Q |
26 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
125 |
Q |
| |
|
||||||||| ||||| || ||| |||| ||||||||||| || || || ||||||||||| || |||| ||| ||||| || || ||||| | |||||| |
|
|
| T |
12259095 |
agcagcctgaatagccgccccaaaagctacagcctcatcaggattaatgctcttgcacaactctttccccttgaaaaaatcctgtaatagctgctgcact |
12258996 |
T |
|
| Q |
126 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatc |
166 |
Q |
| |
|
||| ||||||| || || ||||| ||||| ||||||||||| |
|
|
| T |
12258995 |
ttgagaatcctagaagacccacctacaaggacaacatcatc |
12258955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 166
Target Start/End: Original strand, 7541881 - 7542020
Alignment:
| Q |
27 |
gcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactt |
126 |
Q |
| |
|
|||||||| | |||||| |||||||||||||||||||| || || || ||||||||||| ||||| | || |||||||| | ||||| | || ||| |
|
|
| T |
7541881 |
gcagcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtacta |
7541980 |
T |
|
| Q |
127 |
tgggaatcctcgatgaaccacccacaagaacaacatcatc |
166 |
Q |
| |
|
||||||||||||| || || || ||||| ||||||||||| |
|
|
| T |
7541981 |
tgggaatcctcgaagacccgccgacaaggacaacatcatc |
7542020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 12234364 - 12234453
Alignment:
| Q |
46 |
cataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcct |
136 |
Q |
| |
|
|||||||||| ||||| || ||||| ||||||||||||| ||||||| ||| ||||| || |||||||| | ||||||||||||||||| |
|
|
| T |
12234364 |
cataagcaaccgcctc-tcagggttaatactcttgcacagctccttccccttgaaaaaatcctgcaatagttgctgcactttgggaatcct |
12234453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 32)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 8658992 - 8659242
Alignment:
| Q |
1 |
cattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaa |
100 |
Q |
| |
|
|||||||||| |||| ||| |||| |||||| || | ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| || |
|
|
| T |
8658992 |
cattcttaaagcctttgcttaaaacagcagcttgaagagctgcaccataagcaacagcctcatctgggttgatactcttgtataaaaccttctttgggaa |
8659091 |
T |
|
| Q |
101 |
aaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaaga |
200 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||| |||||||||||| | || |||||||| |||||| |
|
|
| T |
8659092 |
aaggtcttgcaatagatcttgcactttgggaatcctagacgaaccacccacaagaacaatatcgtcaatatcactcatctgtatttttgaatcgctaaga |
8659191 |
T |
|
| Q |
201 |
caactcttaacagtttccatacactcgttgaaaaggtccatattaatttcc |
251 |
Q |
| |
|
||||||| |||||||| ||||||||| || ||||| |||||||| |||||| |
|
|
| T |
8659192 |
caactctcaacagttttcatacactcattaaaaagatccatattcatttcc |
8659242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 10494913 - 10494663
Alignment:
| Q |
1 |
cattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaa |
100 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| | || | || ||||||| ||| || |
|
|
| T |
10494913 |
cattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaataattccttccccttgaa |
10494814 |
T |
|
| Q |
101 |
aaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaaga |
200 |
Q |
| |
|
||| ||| |||||||||| ||||||||||||||||| || || |||||||||||||||| ||||||||||||| || | ||||||||||| || ||| |
|
|
| T |
10494813 |
aaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatcatcaatatcattcttgtatatctttgaatccctgaga |
10494714 |
T |
|
| Q |
201 |
caactcttaacagtttccatacactcgttgaaaaggtccatattaatttcc |
251 |
Q |
| |
|
||||| | |||| | | |||||||||| |||||| ||| |||||||||||| |
|
|
| T |
10494713 |
caactgtcaacaatattcatacactcgatgaaaaagtctatattaatttcc |
10494663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 1301090 - 1301339
Alignment:
| Q |
1 |
cattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaa |
100 |
Q |
| |
|
||||||| || |||| ||| ||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||| | ||| | ||| | || |
|
|
| T |
1301090 |
cattcttgaatcctttgcttaaaatagcagcttgaatagctgcaccataagcaacagcctcgtc-gggttgatactcttgtataaaactttctccgggaa |
1301188 |
T |
|
| Q |
101 |
aaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaaga |
200 |
Q |
| |
|
|| ||||||||||| ||||||||||||||||||||| || || |||||||||||||||| |||||| ||||||||| || || |||||||| |||||| |
|
|
| T |
1301189 |
aatgtcttgcaatatatcttgcactttgggaatcctagacgagccacccacaagaacaatatcatcgatatcactcatgcatatttttgaatcgctaaga |
1301288 |
T |
|
| Q |
201 |
caactcttaacagtttccatacactcgttgaaaaggtccatattaatttcc |
251 |
Q |
| |
|
||||||| ||| |||| ||||||| || ||||| ||||||||||||||| |
|
|
| T |
1301289 |
caactctcaacggtttttgtacactcattaaaaagatccatattaatttcc |
1301339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 8654079 - 8654329
Alignment:
| Q |
1 |
cattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaa |
100 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||| | ||| || ||||| |||| ||||||||||||||||||| || | ||||| |||||| ||| || |
|
|
| T |
8654079 |
cattcttaaagtcttcactcaaaatagcagcctgaacagcagcgccatatgcaatagcctcatctgggttgatattcataaacaaagccttccccttgaa |
8654178 |
T |
|
| Q |
101 |
aaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaaga |
200 |
Q |
| |
|
||| ||| |||||||||| ||||||||||||||||| || || |||||||| || |||||||||||||||||| || | ||||||||||| || ||| |
|
|
| T |
8654179 |
aaactctagcaatagatcctgcactttgggaatcctagacgagccacccacgagtacaacatcatcaatatcattcttgtatatctttgaatctctgaga |
8654278 |
T |
|
| Q |
201 |
caactcttaacagtttccatacactcgttgaaaaggtccatattaatttcc |
251 |
Q |
| |
|
||||| | |||| | | |||||||| ||||||| |||||||||||||||| |
|
|
| T |
8654279 |
caactgtcaacaatattgatacactcattgaaaaagtccatattaatttcc |
8654329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 26 - 251
Target Start/End: Complemental strand, 27831389 - 27831164
Alignment:
| Q |
26 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
125 |
Q |
| |
|
||||||||| | |||||||||| |||||||||||||||| || ||||| ||||||||||||||||| | ||| |||||||| |||||| | |||||| |
|
|
| T |
27831389 |
agcagcctgcacagctgcaccaaaagcaacagcctcatcaggattgatgctcttgcacaaatcctttcccttgaaaaagtccgccaatagctgctgcact |
27831290 |
T |
|
| Q |
126 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacact |
225 |
Q |
| |
|
||||||||||| || || ||||| ||||| ||||||||||| ||| |||| | |||||| || ||| | |||||||||| |||||| |||||||| | |
|
|
| T |
27831289 |
ttgggaatccttgaagagccaccaacaaggacaacatcatctatactactcttgtccatcttagagtcagtgagacaactctcaacagtctccatacatt |
27831190 |
T |
|
| Q |
226 |
cgttgaaaaggtccatattaatttcc |
251 |
Q |
| |
|
| ||||||||||||||||| |||||| |
|
|
| T |
27831189 |
cattgaaaaggtccatattgatttcc |
27831164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 8667048 - 8667220
Alignment:
| Q |
1 |
cattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaa |
100 |
Q |
| |
|
|||||||| | ||||| ||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||| | || | || ||||||| ||| || |
|
|
| T |
8667048 |
cattcttacagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcgtctgggttgatacccatgaataattccttccccttgaa |
8667147 |
T |
|
| Q |
101 |
aaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatca |
173 |
Q |
| |
|
| | ||| ||||| | || ||||||||||||||||| || || ||||| ||||| |||||||||||||||||| |
|
|
| T |
8667148 |
atattctagcaattgttcctgcactttgggaatcctagacgagccaccgacaagtacaacatcatcaatatca |
8667220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 165
Target Start/End: Original strand, 6789152 - 6789305
Alignment:
| Q |
12 |
ccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgca |
111 |
Q |
| |
|
||||||||||| | ||||||||||| ||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||| | | | |||| ||||||| |
|
|
| T |
6789152 |
ccttcgctcaacaaagcagcctggacagctgcaccgtaagcaacagcctcatcagggttgatgctcatgcacaaatcctttcccatgaaaacttcttgca |
6789251 |
T |
|
| Q |
112 |
atagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
165 |
Q |
| |
|
|||| | ||||||||||||||| || || || ||||| ||||| |||||||||| |
|
|
| T |
6789252 |
atagttgttgcactttgggaattctagaagacccaccaacaaggacaacatcat |
6789305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 38 - 166
Target Start/End: Original strand, 8590304 - 8590432
Alignment:
| Q |
38 |
agctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctc |
137 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| || ||| | | |||||||| | ||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
8590304 |
agctgcaccataagcaacagcctcatctggattgatgctattgtaaagatccttccccataaaaaagtcttgcaatagctgctgcactttgggaatccta |
8590403 |
T |
|
| Q |
138 |
gatgaaccacccacaagaacaacatcatc |
166 |
Q |
| |
|
|| |||||||| ||||| ||||||||||| |
|
|
| T |
8590404 |
gaagaaccaccaacaagtacaacatcatc |
8590432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 166
Target Start/End: Complemental strand, 7878247 - 7878107
Alignment:
| Q |
26 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
125 |
Q |
| |
|
||||||||| | ||||||||||||||||||||| ||||| |||||||| || |||| | |||||||| |||||||||||| |||||||| | |||||| |
|
|
| T |
7878247 |
agcagcctgaacagctgcaccataagcaacagcttcatccgggttgatgctactgcaaatatccttccccttaaaaaagtcctgcaatagctgctgcact |
7878148 |
T |
|
| Q |
126 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatc |
166 |
Q |
| |
|
||| ||||||| ||||| ||||| ||||| ||||||||||| |
|
|
| T |
7878147 |
ttgagaatcctagatgatccaccaacaagtacaacatcatc |
7878107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 29582355 - 29582248
Alignment:
| Q |
26 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
125 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||| ||| ||||| ||||||||||| | |||||| |
|
|
| T |
29582355 |
agcagcctgcacagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaaatccttccccttgaaaaattcttgcaatagctgatgcact |
29582256 |
T |
|
| Q |
126 |
ttgggaat |
133 |
Q |
| |
|
|||||||| |
|
|
| T |
29582255 |
ttgggaat |
29582248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 8545287 - 8545427
Alignment:
| Q |
26 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
125 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||| ||||| || |||||||| || ||||||| ||||||||| || || ||||| | | |||| |
|
|
| T |
8545287 |
agcagcctggacagctgcaccataagcaacagcctcatcagggttaatgctcttgcataattccttccccttaaaaaactcctgtaatagctgtctcact |
8545386 |
T |
|
| Q |
126 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatc |
166 |
Q |
| |
|
|| |||||||| || ||||| || ||||| ||||||||||| |
|
|
| T |
8545387 |
ttaggaatcctagaagaaccgccaacaaggacaacatcatc |
8545427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 17267593 - 17267735
Alignment:
| Q |
26 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
125 |
Q |
| |
|
||||||||| | ||| ||||||||||||||||||||||| ||||||||||| ||||| || ||||||| ||| || |||| |||||||| | |||||| |
|
|
| T |
17267593 |
agcagcctgaacagcagcaccataagcaacagcctcatcagggttgatacttttgcataattccttccccttgaagaagttctgcaatagttgctgcact |
17267692 |
T |
|
| Q |
126 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatcaa |
168 |
Q |
| |
|
|| |||||||| || || ||||| ||||| ||||||||||||| |
|
|
| T |
17267693 |
ttcggaatcctagaagacccaccaacaaggacaacatcatcaa |
17267735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 8581354 - 8581494
Alignment:
| Q |
26 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
125 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||| || ||||||| || ||||| || || ||||| | | |||| |
|
|
| T |
8581354 |
agcagcctgaatagcagcaccataagcaacagcctcatcagggttgatgctcttgcataattccttcccctggaaaaactcctgtaatagctgtctcact |
8581453 |
T |
|
| Q |
126 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatc |
166 |
Q |
| |
|
|| |||||||| || |||||||| ||||| ||||||||||| |
|
|
| T |
8581454 |
ttaggaatcctagaagaaccaccaacaaggacaacatcatc |
8581494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 8609571 - 8609711
Alignment:
| Q |
26 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
125 |
Q |
| |
|
||||||||||| ||| |||||||||||||| |||||||| |||||||| ||| | ||||||||||| | || ||||||||||||| ||| | | |||| |
|
|
| T |
8609571 |
agcagcctggacagcagcaccataagcaaccgcctcatcagggttgatgctcatacacaaatcctttccattgaaaaagtcttgcagtagctgcttcact |
8609670 |
T |
|
| Q |
126 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatc |
166 |
Q |
| |
|
|| |||||||| || ||||| || ||||||||||||||||| |
|
|
| T |
8609671 |
ttcggaatcctagaagaacctccaacaagaacaacatcatc |
8609711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 13333904 - 13333833
Alignment:
| Q |
4 |
tcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatac |
75 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13333904 |
tcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatac |
13333833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 169
Target Start/End: Original strand, 17259895 - 17260038
Alignment:
| Q |
26 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
125 |
Q |
| |
|
||||||||| | ||| ||||||||||||||||||||||| |||||||| |||||||| || ||||| | ||| || || || |||||||| | |||||| |
|
|
| T |
17259895 |
agcagcctgaacagcagcaccataagcaacagcctcatcagggttgatgctcttgcataattccttacccttgaagaaatcctgcaatagttgctgcact |
17259994 |
T |
|
| Q |
126 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatcaat |
169 |
Q |
| |
|
|| |||||||| || || ||||| ||||| |||||||||||||| |
|
|
| T |
17259995 |
ttcggaatcctagaagatccaccaacaaggacaacatcatcaat |
17260038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 8537680 - 8537889
Alignment:
| Q |
16 |
cgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatag |
115 |
Q |
| |
|
||||||| | ||||||||||| ||| ||||||||||||||||| ||||| |||||||| || || | | |||||||| | | ||||||| ||||| || |
|
|
| T |
8537680 |
cgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccccctgaaaaagttttgcagcag |
8537779 |
T |
|
| Q |
116 |
atcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtt |
215 |
Q |
| |
|
| ||||||||||||||||| || || ||||| || || ||||||||||| ||| ||| | | |||||| | |||| ||| |||||||||||||||| |
|
|
| T |
8537780 |
actctgcactttgggaatcctagaagagccaccaactagtacaacatcatccatactactactgtccatcttagcatcattaaaacaactcttaacagtt |
8537879 |
T |
|
| Q |
216 |
tccatacact |
225 |
Q |
| |
|
| |||||||| |
|
|
| T |
8537880 |
ttcatacact |
8537889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 159
Target Start/End: Complemental strand, 29578186 - 29578053
Alignment:
| Q |
26 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
125 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||| || ||||| || ||| ||||||||||| | | ||| ||||||||||||||||| | ||||| |
|
|
| T |
29578186 |
agcagcctgcacagctgcaccataagcaacagcctcgtcagggtttatgctcatgcacaaatccctacccttgaaaaagtcttgcaatagtttccgcact |
29578087 |
T |
|
| Q |
126 |
ttgggaatcctcgatgaaccacccacaagaacaa |
159 |
Q |
| |
|
|||||||| || |||||||| || ||||| |||| |
|
|
| T |
29578086 |
ttgggaattctagatgaacctccaacaaggacaa |
29578053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 225
Target Start/End: Complemental strand, 8383377 - 8383191
Alignment:
| Q |
39 |
gctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcg |
138 |
Q |
| |
|
||||||||||||||||||||||| || || || || ||| || | ||||||| || ||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
8383377 |
gctgcaccataagcaacagcctcgtcaggatttatgctcacacaaaggtccttccaattgaaaaagtgttgcaatagctcttgcactttgggaatcctcg |
8383278 |
T |
|
| Q |
139 |
atgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacact |
225 |
Q |
| |
|
| |||||||| | |||||||||||||| | | |||| | |||||| | |||| ||||||| |||| |||||| |||||||||| |
|
|
| T |
8383277 |
aagaaccaccgatgagaacaacatcatctacactactcttgttcatcttagcatcagtaagacagctctcaacagtctccatacact |
8383191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 8616359 - 8616560
Alignment:
| Q |
50 |
agcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccaccc |
149 |
Q |
| |
|
||||||||||||||| || ||||| |||||||||||||||||| | |||||||| |||||| || |||||||| |||||||| || || ||||| |
|
|
| T |
8616359 |
agcaacagcctcatcaggattgatgttcttgcacaaatccttcccatcgaaaaagtcactcaatagttcctgcactttaggaatcctagacgagccaccg |
8616458 |
T |
|
| Q |
150 |
acaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaattt |
249 |
Q |
| |
|
|||||||||| |||||| | | |||| ||||| |||||| ||| |||||||| |||||| | ||||||||||| |||||||||||||| |||| |
|
|
| T |
8616459 |
acaagaacaatatcatctacactactcttctctatcttagaatcattaaaacaactctcaacagtctttatacactcgttaaaaaggtccatattgattt |
8616558 |
T |
|
| Q |
250 |
cc |
251 |
Q |
| |
|
|| |
|
|
| T |
8616559 |
cc |
8616560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 165
Target Start/End: Original strand, 8102313 - 8102460
Alignment:
| Q |
18 |
ctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagat |
117 |
Q |
| |
|
||||| |||||||| || | ||| |||||||||||||||||||| || |||||||| || ||||| | ||||| | || || ||||||||||| || | |
|
|
| T |
8102313 |
ctcaagatagcagcttgaacagcggcaccataagcaacagcctcgtcggggttgatgcttttgcatagctccttaccattgaagaagtcttgcaacagtt |
8102412 |
T |
|
| Q |
118 |
cttgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
165 |
Q |
| |
|
|| |||||||||||||| | ||||||||| |||||||||||||||| |
|
|
| T |
8102413 |
gctgaactttgggaatcctagttgaaccaccaacaagaacaacatcat |
8102460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 8569967 - 8570105
Alignment:
| Q |
28 |
cagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcacttt |
127 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||| ||||| || || ||||| || ||||||| || ||||| ||||| ||||| | |||||| |
|
|
| T |
8569967 |
cagcctgaatagctgcaccgtaagcaacagcctcatcagggttaatgctgttgcataattccttcccctggaaaaactcttgtaatagctgcctcacttt |
8570066 |
T |
|
| Q |
128 |
gggaatcctcgatgaaccacccacaagaacaacatcatc |
166 |
Q |
| |
|
|||||||| || |||||||| ||||| ||||||||||| |
|
|
| T |
8570067 |
aggaatcctagaagaaccaccaacaaggacaacatcatc |
8570105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 8575966 - 8576120
Alignment:
| Q |
12 |
ccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgca |
111 |
Q |
| |
|
||||| ||||| | |||||| |||| | | ||||||||||||||||||||||| |||||||| ||||| || || ||||||| ||| |||| || || | |
|
|
| T |
8575966 |
ccttcactcaacaaagcagcttggacaacagcaccataagcaacagcctcatcagggttgatgctcttacataattccttccccttgaaaacctcctgta |
8576065 |
T |
|
| Q |
112 |
atagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
166 |
Q |
| |
|
|||| | | |||||| |||||||| || |||||||| ||||| ||||||||||| |
|
|
| T |
8576066 |
atagctgtctcactttaggaatcctagaagaaccaccaacaaggacaacatcatc |
8576120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 8636856 - 8636712
Alignment:
| Q |
27 |
gcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactt |
126 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||| | |||||| ||||| |||| |||||| |||||||| ||| || ||||| | ||||| | |
|
|
| T |
8636856 |
gcagcctggactgctgctccataagcaacagcctcatcagcgttgatgctcttacacagttccttcgccttaaaaatgtcctgtaatagttgctgcacct |
8636757 |
T |
|
| Q |
127 |
tgggaatcctcgatgaaccacccacaagaacaacatcatcaatat |
171 |
Q |
| |
|
| |||||||| || || ||||| ||||| ||||||||||| |||| |
|
|
| T |
8636756 |
ttggaatcctagaggagccaccaacaaggacaacatcatctatat |
8636712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 165
Target Start/End: Complemental strand, 8017911 - 8017788
Alignment:
| Q |
42 |
gcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatg |
141 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| | || || | || || || |||||||| || | || ||||||||||| || | || |
|
|
| T |
8017911 |
gcaccataagcaacagcctcgtctgggttgatactcttgcaaagctctttaccattgaagaaatcttgcaacagttgctgaactttgggaattctagttg |
8017812 |
T |
|
| Q |
142 |
aaccacccacaagaacaacatcat |
165 |
Q |
| |
|
|||| || |||||||||||||||| |
|
|
| T |
8017811 |
aaccgccaacaagaacaacatcat |
8017788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 3146905 - 3147057
Alignment:
| Q |
13 |
cttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaa |
112 |
Q |
| |
|
|||| ||||| | |||||| || | |||||||||||||||||| |||||||| |||||||| || || |||| || ||||| |||||| || ||||| |
|
|
| T |
3146905 |
cttcactcaacaaagcagcttgcacagctgcaccataagcaacggcctcatcagggttgatgctgttacacagatgcttccctgcaaaaaattcctgcaa |
3147004 |
T |
|
| Q |
113 |
tagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
165 |
Q |
| |
|
||| | ||||||||| ||||| || || || ||||| ||||| || ||||||| |
|
|
| T |
3147005 |
tagttgttgcacttttggaattctagacgagccaccgacaaggacgacatcat |
3147057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 27846620 - 27846555
Alignment:
| Q |
26 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatcctt |
91 |
Q |
| |
|
||||||||| | |||||| ||| |||||||||||||||| |||||||| |||||| ||| |||||| |
|
|
| T |
27846620 |
agcagcctgcacagctgctccaaaagcaacagcctcatcagggttgatgctcttgtacatatcctt |
27846555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 3147092 - 3147143
Alignment:
| Q |
200 |
acaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcc |
251 |
Q |
| |
|
|||||||||||||||||||| |||||| ||||||| |||||||| |||||| |
|
|
| T |
3147092 |
acaactcttaacagtttccaaacactcagtgaaaagatccatattgatttcc |
3147143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 8673979 - 8673926
Alignment:
| Q |
182 |
catctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaag |
235 |
Q |
| |
|
|||||| | |||| |||||||| ||| ||||||||||| ||||||||||||||| |
|
|
| T |
8673979 |
catcttggcatcaataagacaattctcaacagtttccaaacactcgttgaaaag |
8673926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 8586063 - 8585995
Alignment:
| Q |
183 |
atctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcc |
251 |
Q |
| |
|
||||| ||||| |||||||||||| |||||| | |||||||| || |||||||||||||| |||||| |
|
|
| T |
8586063 |
atcttagaatcggtaagacaactctcaacagtatttatacactcattaaaaaggtccatattgatttcc |
8585995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 13333813 - 13333745
Alignment:
| Q |
183 |
atctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcc |
251 |
Q |
| |
|
||||||||||| || |||||||| | |||| | | |||||||||| |||||| ||| |||||||||||| |
|
|
| T |
13333813 |
atctttgaatccctgagacaactgtcaacaatattcatacactcgatgaaaaagtctatattaatttcc |
13333745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 39985292 - 39985356
Alignment:
| Q |
18 |
ctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgca |
82 |
Q |
| |
|
||||| ||||||||||| | ||| |||||||| |||||||||||||| || || || |||||||| |
|
|
| T |
39985292 |
ctcaagatagcagcctgaacagcagcaccatatgcaacagcctcatcaggatttatgctcttgca |
39985356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 9336430 - 9336180
Alignment:
| Q |
1 |
cattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaa |
100 |
Q |
| |
|
|||||||||| ||||| |||||||||||||| || | |||||||||||||||||||||||||||||||||||||| | || | || ||||||| ||| || |
|
|
| T |
9336430 |
cattcttaaagccttcactcaaaatagcagcttgaacagctgcaccataagcaacagcctcatctgggttgatacccatgaataattccttccccttgaa |
9336331 |
T |
|
| Q |
101 |
aaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaaga |
200 |
Q |
| |
|
||| ||| ||||||| ||||||||||| |||||||| || || |||||||||||||||| ||||||||||| |||| | ||||||||||| || ||| |
|
|
| T |
9336330 |
aaattctagcaatagttcttgcactttcggaatcctagacgagccacccacaagaacaatatcatcaatattactcttgtatatctttgaatccctgaga |
9336231 |
T |
|
| Q |
201 |
caactcttaacagtttccatacactcgttgaaaaggtccatattaatttcc |
251 |
Q |
| |
|
|| | | |||| | | ||||||||| ||||||| |||||| |||| |||| |
|
|
| T |
9336230 |
caggtgtcaacaatattcatacactcattgaaaaagtccatgttaagttcc |
9336180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 30774881 - 30775131
Alignment:
| Q |
1 |
cattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaa |
100 |
Q |
| |
|
||||||||| ||||| ||||| | ||||||||||| |||||| || | |||||| |||||||| || ||||| ||||||||||||||||||| || || |
|
|
| T |
30774881 |
cattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagcaactgcctcatcaggattgatgctcttgcacaaatccttcccattgaa |
30774980 |
T |
|
| Q |
101 |
aaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaaga |
200 |
Q |
| |
|
|| | ||||||| || ||||||||||||||||| || |||||||| |||||||||| |||||| | | |||| | | |||||||||| ||||| |
|
|
| T |
30774981 |
gaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctacactactcttgtctacctttgaatcagtaaga |
30775080 |
T |
|
| Q |
201 |
caactcttaacagtttccatacactcgttgaaaaggtccatattaatttcc |
251 |
Q |
| |
|
||||||| |||||| | |||||||| || |||||||||||||| |||||| |
|
|
| T |
30775081 |
caactctcaacagtctgtatacactcattaaaaaggtccatattgatttcc |
30775131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 35132110 - 35132250
Alignment:
| Q |
26 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
125 |
Q |
| |
|
||||||||| | ||||| |||||||| ||||||||||| ||||| || ||||||||||| ||||||| || ||||||| ||||||||| | |||||| |
|
|
| T |
35132110 |
agcagcctgaactgctgccccataagctacagcctcatcggggttaatgctcttgcacaactccttccctttgaaaaagttttgcaatagctgctgcact |
35132209 |
T |
|
| Q |
126 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatc |
166 |
Q |
| |
|
||||||||||| || || || || ||||||||||||||||| |
|
|
| T |
35132210 |
ttgggaatcctagaagaccctccaacaagaacaacatcatc |
35132250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 168
Target Start/End: Complemental strand, 23597109 - 23596957
Alignment:
| Q |
16 |
cgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatag |
115 |
Q |
| |
|
|||||||||||||||| |||| || || |||||||||||||||||||| |||||||| ||||| || | ||||||| || || || |||||||| || |
|
|
| T |
23597109 |
cgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaag |
23597010 |
T |
|
| Q |
116 |
atcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaa |
168 |
Q |
| |
|
| ||| || ||||||||||| | || || || ||||||||||||||||||| |
|
|
| T |
23597009 |
ttgttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatcaa |
23596957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 23588255 - 23588108
Alignment:
| Q |
18 |
ctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagat |
117 |
Q |
| |
|
|||||||||||||| |||| ||||| ||||| |||||||| ||||| |||||||| ||||| || | ||||| | || || || |||||||| || | |
|
|
| T |
23588255 |
ctcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagtt |
23588156 |
T |
|
| Q |
118 |
cttgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
165 |
Q |
| |
|
||| || ||||||||||| | || ||||| |||||||||||||||| |
|
|
| T |
23588155 |
gttgaaccttgggaatcctagtggatccaccaacaagaacaacatcat |
23588108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 54396067 - 54396216
Alignment:
| Q |
16 |
cgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatag |
115 |
Q |
| |
|
|||||||||| || || || | ||| ||||||||||||||||| ||||| ||||| ||||||||||| | || |||| || || || || ||||| || |
|
|
| T |
54396067 |
cgctcaaaatcgctgcttgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaag |
54396166 |
T |
|
| Q |
116 |
atcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
165 |
Q |
| |
|
| ||| ||||| |||||||| | ||| ||||| ||||||||||| |||| |
|
|
| T |
54396167 |
ctgttgaacttttggaatccttgttgatccaccaacaagaacaacttcat |
54396216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 251
Target Start/End: Original strand, 43744450 - 43744695
Alignment:
| Q |
6 |
ttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagt |
105 |
Q |
| |
|
||||| ||||| ||||| | ||||||||| | |||||||||| |||||| |||||||| ||||| || |||| ||||||||||||| |||||| | |
|
|
| T |
43744450 |
ttaaagccttcactcaacaaagcagcctgcacagctgcaccaatagcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaatt |
43744549 |
T |
|
| Q |
106 |
cttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaact |
205 |
Q |
| |
|
| |||||||| | ||| ||||| |||||||| || || ||||| |||||||||||||||| ||| | ||| | |||||| | |||| |||||||||| |
|
|
| T |
43744550 |
cctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaact |
43744649 |
T |
|
| Q |
206 |
cttaacagtttccatacactcgttgaaaaggtccatattaatttcc |
251 |
Q |
| |
|
|| |||| ||| || |||||||||||| || |||||||| |||||| |
|
|
| T |
43744650 |
ctcaacaattttcaaacactcgttgaagagatccatattgatttcc |
43744695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 12528144 - 12528298
Alignment:
| Q |
12 |
ccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgca |
111 |
Q |
| |
|
||||| ||||| | ||||||||| | ||| ||||||||||||||||||||||| |||||||| |||||| | || ||||| | ||| ||||| || |||| |
|
|
| T |
12528144 |
ccttcactcaacaaagcagcctgaacagcggcaccataagcaacagcctcatcagggttgatgctcttgtataactccttgcccttgaaaaactcctgca |
12528243 |
T |
|
| Q |
112 |
atagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
166 |
Q |
| |
|
|||| | | ||||||||||||||| || || ||||| ||||| |||| |||||| |
|
|
| T |
12528244 |
atagctgcttcactttgggaatcctagacgagccaccaacaagtacaatatcatc |
12528298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 163
Target Start/End: Original strand, 28219552 - 28219709
Alignment:
| Q |
6 |
ttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagt |
105 |
Q |
| |
|
||||| ||||| ||||| | ||||||||| | ||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||| |||||| | |
|
|
| T |
28219552 |
ttaaagccttcactcaacaaagcagcctgcacagctgcaccataagcaacagcctcatcagggttaatgctcttacacaattccttccctccaaaaaatt |
28219651 |
T |
|
| Q |
106 |
cttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatc |
163 |
Q |
| |
|
| |||| ||| | ||| ||||| ||||| || || || || || |||||||||||||| |
|
|
| T |
28219652 |
cctgcagtagttgttgtacttttggaattctagaggagcctccaacaagaacaacatc |
28219709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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