View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1304_low_164 (Length: 208)
Name: NF1304_low_164
Description: NF1304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1304_low_164 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 94; Significance: 4e-46; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 99 - 208
Target Start/End: Original strand, 39793435 - 39793544
Alignment:
| Q |
99 |
ccctgcaacaggtttgtttctactttccacaaaaaggggactgagcacaacaaaagataccatcatacgaagtggtaggttgccaagaaaaccctacgat |
198 |
Q |
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| T |
39793435 |
ccctgcaacaggtttgtttctactttccacaaaaatgggactgagcacaactaaagataccatcatacgaagtggtaggttgccaagaaaaacctacaat |
39793534 |
T |
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| Q |
199 |
taccgccgct |
208 |
Q |
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|||||||||| |
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| T |
39793535 |
taccgccgct |
39793544 |
T |
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