View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1304_low_66 (Length: 383)
Name: NF1304_low_66
Description: NF1304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1304_low_66 |
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Alignment Details
Target: chr2 (Bit Score: 166; Significance: 9e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 41 - 210
Target Start/End: Complemental strand, 25294111 - 25293942
Alignment:
| Q |
41 |
tgtgcgtggaacaaggttaccgtagaggccgagaatgacgcgaccgagtaaggtggattcggagcatagggtggagatggtgtcgccgagggtgcgattt |
140 |
Q |
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| T |
25294111 |
tgtgcgtggaacgaggttaccgtagaggccgagaatgacgcgaccgagtaaggtggattcggagcatagggtggagatggtgtcgccgagggtgcgattt |
25294012 |
T |
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| Q |
141 |
gggaggtaatagttggggcagaggctgaagtccatgaagatgcggtcggtgatggtggggtttggtagct |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25294011 |
gggaggtaatagttggggcagaggctgaagtccatgaagatgcggtcggtgatggtggggtttggtagct |
25293942 |
T |
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