View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1304_low_72 (Length: 373)

Name: NF1304_low_72
Description: NF1304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1304_low_72
NF1304_low_72
[»] chr3 (7 HSPs)
chr3 (4-356)||(41559761-41560104)
chr3 (31-156)||(49983522-49983646)
chr3 (27-153)||(30041360-30041485)
chr3 (27-172)||(32211843-32211988)
chr3 (25-110)||(24650132-24650217)
chr3 (27-78)||(25295106-25295157)
chr3 (24-77)||(40344981-40345034)
[»] chr2 (9 HSPs)
chr2 (27-129)||(31404938-31405039)
chr2 (27-172)||(32872290-32872435)
chr2 (24-97)||(14200418-14200491)
chr2 (18-97)||(34262733-34262811)
chr2 (28-153)||(38214080-38214206)
chr2 (27-171)||(39063648-39063793)
chr2 (49-172)||(7011043-7011167)
chr2 (30-76)||(17368928-17368974)
chr2 (28-174)||(38496420-38496566)
[»] chr7 (8 HSPs)
chr7 (27-146)||(41508075-41508194)
chr7 (27-172)||(10599804-10599949)
chr7 (39-172)||(42935403-42935536)
chr7 (27-116)||(14658828-14658917)
chr7 (39-128)||(14568350-14568439)
chr7 (31-76)||(35333328-35333373)
chr7 (47-118)||(2195808-2195879)
chr7 (39-116)||(17757477-17757554)
[»] chr8 (8 HSPs)
chr8 (27-156)||(36408239-36408368)
chr8 (27-167)||(38209573-38209711)
chr8 (27-152)||(36054785-36054910)
chr8 (27-173)||(31658800-31658947)
chr8 (106-167)||(4641024-4641086)
chr8 (23-152)||(8251205-8251334)
chr8 (27-95)||(5923844-5923912)
chr8 (30-76)||(11778083-11778129)
[»] chr1 (6 HSPs)
chr1 (38-156)||(27442436-27442554)
chr1 (27-171)||(17971416-17971560)
chr1 (27-156)||(28724018-28724146)
chr1 (27-171)||(32715643-32715786)
chr1 (27-152)||(36437254-36437378)
chr1 (27-147)||(42745518-42745637)
[»] chr6 (5 HSPs)
chr6 (39-171)||(19780181-19780313)
chr6 (26-171)||(9425440-9425587)
chr6 (27-96)||(6657903-6657972)
chr6 (28-116)||(180345-180433)
chr6 (30-78)||(34837207-34837255)
[»] chr4 (4 HSPs)
chr4 (27-169)||(54863874-54864018)
chr4 (24-116)||(21128101-21128193)
chr4 (27-104)||(18838769-18838845)
chr4 (24-97)||(25376895-25376968)
[»] scaffold0026 (1 HSPs)
scaffold0026 (27-78)||(68841-68892)
[»] chr5 (4 HSPs)
chr5 (30-152)||(18704968-18705090)
chr5 (26-173)||(3629262-3629409)
chr5 (27-78)||(11983635-11983686)
chr5 (46-116)||(17686237-17686308)
[»] scaffold1809 (1 HSPs)
scaffold1809 (27-116)||(551-640)
[»] scaffold0015 (1 HSPs)
scaffold0015 (72-172)||(38931-39031)


Alignment Details
Target: chr3 (Bit Score: 272; Significance: 1e-152; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 4 - 356
Target Start/End: Complemental strand, 41560104 - 41559761
Alignment:
Q  4 ataaaaatttgtgaagtataactcactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||    
T  41560104 ataaaaatttgtgaagtataactcactaatattagaaagacaaacattaaatgagagttaaaaaagtcttttaaatcataaatgtatcttaaaaattatg 41560005  T
Q  104 attttttcttatatactggaccaaattttttattgaaaattttcctataaataacaccggagggagtatatgatatttagaatgaaattattgagaaaaa 203  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41560004 attttttcttatatattggaccaaattttttattgaaaatttttctataaataacaccggagggagtatatgatatttagaatgaaattattgagaaaaa 41559905  T
Q  204 ttgaagtcctagagacgcaccaatccacgtggccgtgtatggcacaaggcaattaaggcatgtgtcattttgtgtagcaatgataccatatacgtatata 303  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  41559904 ttgaagtcct--agacgcaccaatccacgtggccgtgtatggcacaaggcaattaaggcatgtgtcattttctgtagcaatgataccat-tacgtatata 41559808  T
Q  304 tatatannnnnnnnnnagtatatgtcatgtatcataatgtctaatatatcaat 356  Q
    |||||           |||||||||||||||||||||||||||||||||||||    
T  41559807 tatat------tttttagtatatgtcatgtatcataatgtctaatatatcaat 41559761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 49983646 - 49983522
Alignment:
Q  31 aatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggaccaaatt 130  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||||||||  ||||||||| ||||||| || ||| ||||||||||||| | || | ||||    
T  49983646 aatattaaaaagacaaacattaaatgagggttagaaaagtcttttaaacaataaatgtatcttaaaagttgtgactttttcttatatatttgatc-aatt 49983548  T
Q  131 ttttattgaaaattttcctataaata 156  Q
    |||| |||||||||||||||||||||    
T  49983547 tttttttgaaaattttcctataaata 49983522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 30041360 - 30041485
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacca 126  Q
    ||||||||||| ||||||||||||||| | ||| ||| ||||||||||||||  |||||| |||||| ||| || | | ||||||| ||||| |||||||    
T  30041360 cactaatattaaaaagacaaacattaattaagggttagaaaagtcttttaaacaataaatatacctt-aaagttgtcactttttctaatatattggacca 30041458  T
Q  127 aattttttattgaaaattttcctataa 153  Q
    ||    || |||||||||||| |||||    
T  30041459 aaaaaatttttgaaaattttcttataa 30041485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 32211843 - 32211988
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacca 126  Q
    ||||||||||| ||||||||||||||||| | |  || ||||||||||||||  |||| |  ||||||||| || |||  |||||||||| |   |||||    
T  32211843 cactaatattaaaaagacaaacattaaataacgggtagaaaagtcttttaaacaataactacaccttaaaagttgtgaaattttcttataaataagacca 32211942  T
Q  127 aattttttattgaaaattttcctataaataacaccggagggagtat 172  Q
    |   |||| |||||||||||| |||| |||  ||||||||||||||    
T  32211943 acaatttttttgaaaattttcttatatataggaccggagggagtat 32211988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 24650217 - 24650132
Alignment:
Q  25 ctcactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgatttttt 110  Q
    ||||||||||||| ||||||||| |||||| || | |||||||||| |||| ||  |||||| |||||||||| || | |||||||    
T  24650217 ctcactaatattaaaaagacaaaaattaaaagaaggttaaaaaagtttttttaacaataaatataccttaaaagttgtaatttttt 24650132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 25295106 - 25295157
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaa 78  Q
    ||||||||||| ||||| || ||||||||||||  |||||||||||||||||    
T  25295106 cactaatattaaaaagagaagcattaaatgagggataaaaaagtcttttaaa 25295157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 40344981 - 40345034
Alignment:
Q  24 actcactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaa 77  Q
    |||||||||||||| ||||||||| |||||||||||  || |||||||| ||||    
T  40344981 actcactaatattaaaaagacaaatattaaatgaggggtataaaagtctcttaa 40345034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 6e-25; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 31405039 - 31404938
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacca 126  Q
    ||||||||||| ||||||||| ||||||||||| ||| ||||||||||||||  |||||||||||||||||| ||||| ||||||||||||  |||||||    
T  31405039 cactaatattaaaaagacaaatattaaatgagggttagaaaagtcttttaaaaaataaatgtaccttaaaaa-tatgactttttcttatattttggacca 31404941  T
Q  127 aat 129  Q
    |||    
T  31404940 aat 31404938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 172
Target Start/End: Complemental strand, 32872435 - 32872290
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacca 126  Q
    ||||||||||| || |||||||||||||| ||| ||  ||||||||||||||  ||||||||| ||||||| | |  | ||||||||||||| | |||||    
T  32872435 cactaatattaaaaggacaaacattaaattagggttggaaaagtcttttaaacaataaatgtaacttaaaagtcacaactttttcttatatatttgacca 32872336  T
Q  127 aattttttattgaaaattttcctataaataacaccggagggagtat 172  Q
    || ||||| ||||||| |||| ||||||||  |||||| |||||||    
T  32872335 aagttttttttgaaaaatttcttataaataggaccggaaggagtat 32872290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 14200418 - 14200491
Alignment:
Q  24 actcactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaa 97  Q
    |||||||||||||  |||||  |||||||||||||| ||||||||||||||||||| ||||||||| |||||||    
T  14200418 actcactaatattgaaaagatcaacattaaatgagggttaaaaaagtcttttaaataataaatgtatcttaaaa 14200491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 34262811 - 34262733
Alignment:
Q  18 agtataactcactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaa 97  Q
    |||||||| ||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||  ||||||| |||||||||    
T  34262811 agtataac-cactaatattaaaaagacaaacattaattgagggttagaaaagtcttttaaacaataaatgaaccttaaaa 34262733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 38214206 - 38214080
Alignment:
Q  28 actaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacc-a 126  Q
    |||||||||| ||||| ||  |||||||||||  || ||||||||||||||  ||||||  ||||||||| || ||| ||||||||||| | |||||| |    
T  38214206 actaatattaaaaagagaagtattaaatgagggatataaaagtcttttaaacaataaatacaccttaaaagttgtgaatttttcttataaattggaccaa 38214107  T
Q  127 aattttttattgaaaattttcctataa 153  Q
    |||||||| |||||| ||||| |||||    
T  38214106 aatttttttttgaaatttttcttataa 38214080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 39063648 - 39063793
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacca 126  Q
    ||||||||||| ||||| ||  |||||||||| | || ||||||||||||||  ||||||  ||||||||| || ||| ||||||||||| | |||||||    
T  39063648 cactaatattaaaaagagaagtattaaatgagcaatataaaagtcttttaaacaataaatacaccttaaaagttgtgaatttttcttataaattggacca 39063747  T
Q  127 aattt-tttattgaaaattttcctataaataacaccggagggagta 171  Q
    | ||| ||| || ||||||||| |||||  |  |||||||||||||    
T  39063748 attttatttttttaaaattttcttataataaggaccggagggagta 39063793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 172
Target Start/End: Complemental strand, 7011167 - 7011043
Alignment:
Q  49 attaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggaccaaatt-ttttattgaaaattttc 147  Q
    ||||||||||| ||| ||||||||||||||  ||||||||| |||||||||| ||| ||||||||||| |  | | ||| || |||| || |||||||||    
T  7011167 attaaatgagggttagaaaagtcttttaaacaataaatgtatcttaaaaattgtgactttttcttataaatagaatcaatttattttttttaaaattttc 7011068  T
Q  148 ctataaataacaccggagggagtat 172  Q
     ||||||||  |||||| |||||||    
T  7011067 ttataaataggaccggatggagtat 7011043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 17368928 - 17368974
Alignment:
Q  30 taatattagaaagacaaacattaaatgaggattaaaaaagtctttta 76  Q
    |||||||| ||||||||||||||||| |||| |||||||||||||||    
T  17368928 taatattaaaaagacaaacattaaataaggactaaaaaagtctttta 17368974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 174
Target Start/End: Complemental strand, 38496566 - 38496420
Alignment:
Q  28 actaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggaccaa 127  Q
    |||||||||| ||| |||||| |||||| |||  || ||| ||||||||||  |||| | ||||||||||||| |||  |||||||||| |  |||| ||    
T  38496566 actaatattaaaaatacaaacgttaaataaggggtagaaaggtcttttaaacaataactataccttaaaaattctgacattttcttataaataggactaa 38496467  T
Q  128 attttttattgaaaattttcctataaataacaccggagggagtatat 174  Q
      | ||| |||||||||||| |||| |||  | ||||||||||||||    
T  38496466 catattttttgaaaattttcttatatataggatcggagggagtatat 38496420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 41508194 - 41508075
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacca 126  Q
    ||||||||||| ||||||||||||||||| |||  ||||||||||||||||   |||| |  |||||||||||| |||| |||||||||||   ||||||    
T  41508194 cactaatattaaaaagacaaacattaaataaggggtaaaaaagtcttttaagcaataactacaccttaaaaattgtgatattttcttatatttaggacca 41508095  T
Q  127 aattttttattgaaaatttt 146  Q
    |||||||| |||||||||||    
T  41508094 aatttttttttgaaaatttt 41508075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 10599804 - 10599949
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacca 126  Q
    ||||| ||||| ||||| ||||||||||||| | ||| |||||| ||| |||  |||||||||||| |||| || ||| ||||||||||| |  |||| |    
T  10599804 cactattattaaaaagataaacattaaatgaaggttagaaaagtttttcaaacaataaatgtacctcaaaagttgtgactttttcttataaataggacaa 10599903  T
Q  127 aattttttattgaaaattttcctataaataacaccggagggagtat 172  Q
      |||||| || ||||||||| |||||||   ||||||| ||||||    
T  10599904 tttttttttttaaaaattttcttataaatgggaccggagtgagtat 10599949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 172
Target Start/End: Complemental strand, 42935536 - 42935403
Alignment:
Q  39 aaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggaccaaattttttattg 138  Q
    |||||| ||||||||||||| |||| |||| |||||||||  ||||||||| || |||| || ||| ||||||||||| |  | ||||||     | |||    
T  42935536 aaagaccaacattaaatgagaattagaaaaatcttttaaacaataaatgtatctcaaaagttgtgactttttcttataaatagaaccaaaaaaaattttg 42935437  T
Q  139 aaaattttcctataaataacaccggagggagtat 172  Q
    ||||||||| |||| |||| ||||||||||||||    
T  42935436 aaaattttcttatatataagaccggagggagtat 42935403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 14658828 - 14658917
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatga-ttttttcttata 116  Q
    ||||| ||||| ||||| |||||||||| ||||||| ||||||||||||| ||  |||||  ||||| |||||||||| ||||||||||||    
T  14658828 cactagtattaaaaagataaacattaaacgaggattgaaaaagtcttttacatagtaaatacacctt-aaaattatgacttttttcttata 14658917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 14568439 - 14568350
Alignment:
Q  39 aaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggaccaaa 128  Q
    ||||| ||||||||||||||| ||| ||||||||||||||  |||||| || ||||||| ||   | |||||||||||||  ||||||||    
T  14568439 aaagagaaacattaaatgagggttagaaaagtcttttaaacaataaatatatcttaaaagttgaaactttttcttatatataggaccaaa 14568350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 35333373 - 35333328
Alignment:
Q  31 aatattagaaagacaaacattaaatgaggattaaaaaagtctttta 76  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||    
T  35333373 aatattaaaaagacaaacattaaatgagggttaaaaaaatctttta 35333328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 2195879 - 2195808
Alignment:
Q  47 acattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatata 118  Q
    ||||||||||| || || ||||||||||||||  |||| |  ||||||||| ||||||| ||||||||||||    
T  2195879 acattaaatgaagagtagaaaagtcttttaaacaataactacaccttaaaagttatgatattttcttatata 2195808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 17757477 - 17757554
Alignment:
Q  39 aaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttata 116  Q
    |||||| | |||||||| ||| ||||||| |||||||||   ||||||||||||||||| || ||  |||||||||||    
T  17757477 aaagaccaccattaaattagggttaaaaatgtcttttaagcaataaatgtaccttaaaagttgtgtctttttcttata 17757554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 36408239 - 36408368
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacca 126  Q
    ||||||||||| |||||||||||||||| |||| |||||||||| | |||||  ||||||||||||| ||| || ||| |||||||||||||   |||||    
T  36408239 cactaatattaaaaagacaaacattaaacgagggttaaaaaagtttgttaaacaataaatgtacctt-aaagttgtgactttttcttatatataagacca 36408337  T
Q  127 aa-ttttttattgaaaattttcctataaata 156  Q
    || |||||| |||||||||||| ||||||||    
T  36408338 aagtttttttttgaaaattttcttataaata 36408368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 167
Target Start/End: Original strand, 38209573 - 38209711
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacca 126  Q
    ||||||||||  |||||| |||||||||||||| ||| | ||||||||||||  ||||||||||||||||| || ||| ||||||||||| |   |||||    
T  38209573 cactaatattgaaaagaccaacattaaatgagggttagagaagtcttttaaacaataaatgtaccttaaaagttgtgactttttcttataaatatgacca 38209672  T
Q  127 aattttttattgaaaattttcctataaataacaccggaggg 167  Q
    |||||||| ||  |||||||| |||| |||  |||||||||    
T  38209673 aattttttttt--aaattttcttatatataggaccggaggg 38209711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 36054910 - 36054785
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacca 126  Q
    ||||||||||| ||||||||||||||| | |||  || ||||||||||||||  |||||| |||||||||| || |||  |||||||||| |  ||||||    
T  36054910 cactaatattaaaaagacaaacattaattaaggggtataaaagtcttttaaacaataaatataccttaaaagttgtgacattttcttataaataggacca 36054811  T
Q  127 aattttttattgaaaattttcctata 152  Q
    ||  || | |||||||||||| ||||    
T  36054810 aaaattattttgaaaattttcttata 36054785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 173
Target Start/End: Complemental strand, 31658947 - 31658800
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacca 126  Q
    ||||| ||||| ||||||||||||||||| | | ||||||||||||||||||  |||| |  | ||||||| || |||| |||||||||| |  | ||||    
T  31658947 cactagtattaaaaagacaaacattaaataaaggttaaaaaagtcttttaaacaataactacatcttaaaagttgtgatattttcttataaatagaacca 31658848  T
Q  127 a-attttttattgaaaattttcctataaataacaccggagggagtata 173  Q
    | | ||||| || ||||||||| |||| |||| |||||| | ||||||    
T  31658847 acaattttttttaaaaattttcttatatataagaccggatgaagtata 31658800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 4641086 - 4641024
Alignment:
Q  106 tttttcttatatactggaccaaatt-ttttattgaaaattttcctataaataacaccggaggg 167  Q
    ||||||||||||| ||||||||||| |||| |||||||||||| ||||||||  |||||||||    
T  4641086 tttttcttatatattggaccaaattttttttttgaaaattttcttataaataggaccggaggg 4641024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 8251334 - 8251205
Alignment:
Q  23 aactcactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactgg 122  Q
    ||||||||||||||| |||||||| |||||||| | |   ||||| |||||||||   |||| |  ||||||||| || |||| |||||||||| |  ||    
T  8251334 aactcactaatattaaaaagacaaccattaaataatggggaaaaaggtcttttaagcaataattacaccttaaaagttgtgatattttcttataaatagg 8251235  T
Q  123 accaaattttttattgaaaattttcctata 152  Q
    ||||||| |||| || ||||||||| ||||    
T  8251234 accaaatattttttttaaaattttcttata 8251205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 5923912 - 5923844
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaa 95  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||    ||||||  |||||||||||||||    
T  5923912 cactaatattaaaaagacaaacattaaatgagggttagaaaaaaaatttaaacaataaatgtaccttaa 5923844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 11778129 - 11778083
Alignment:
Q  30 taatattagaaagacaaacattaaatgaggattaaaaaagtctttta 76  Q
    |||||||| ||||||||||||||||| ||| |||| |||||||||||    
T  11778129 taatattaaaaagacaaacattaaataagggttaagaaagtctttta 11778083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 38 - 156
Target Start/End: Original strand, 27442436 - 27442554
Alignment:
Q  38 gaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggaccaaattttttatt 137  Q
    ||||||| |||||||||||||| ||| ||||||||||||||   ||||| ||| |||||| || ||||||||||||||| |  ||||||| |||||| ||    
T  27442436 gaaagaccaacattaaatgagggttagaaaagtcttttaaacactaaatatactttaaaagttgtgattttttcttataaataggaccaagttttttttt 27442535  T
Q  138 gaaaattttcctataaata 156  Q
    |||||||||| ||||||||    
T  27442536 gaaaattttcttataaata 27442554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 17971416 - 17971560
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacca 126  Q
    ||||||||||  |||||| |||||||||||||| ||| ||||||||||||||  |||||| |||||||||| || ||| ||||||||||| |  ||||||    
T  17971416 cactaatattgaaaagaccaacattaaatgagggttagaaaagtcttttaaacaataaatataccttaaaagttgtgactttttcttataaataggacca 17971515  T
Q  127 aattttttattgaaaattttcctataaataacaccggagggagta 171  Q
    ||   ||| |||||||||||| |||| |||  ||| |||||||||    
T  17971516 aaacgttttttgaaaattttcttatatataggaccagagggagta 17971560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 28724018 - 28724146
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacca 126  Q
    ||||||||||| ||||| ||||||||| ||||| ||| ||||||||||||||| ||||||| || || ||| || ||| ||||||||||||| |||||||    
T  28724018 cactaatattaaaaagataaacattaattgagggttagaaaagtcttttaaataataaatgcacatt-aaagttgtgactttttcttatatattggacca 28724116  T
Q  127 aattttttattgaaaattttcctataaata 156  Q
    | |||||| || |||| ||||  |||||||    
T  28724117 attttttttttaaaaagtttctaataaata 28724146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 32715786 - 32715643
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacca 126  Q
    ||||||||||  |||||  ||||||||||||||  || ||||| ||||||||  ||||||| ||||||||| || ||| ||||||||||| |  ||||||    
T  32715786 cactaatattgaaaagatcaacattaaatgagggctagaaaagacttttaaacaataaatg-accttaaaatttgtgactttttcttataaataggacca 32715688  T
Q  127 aattttttattgaaaattttcctataaataacaccggagggagta 171  Q
    |||||||| |  ||||||||  |||| |||  |||||||||||||    
T  32715687 aattttttttaaaaaattttgttatatataggaccggagggagta 32715643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 36437254 - 36437378
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacca 126  Q
    ||||||||||| ||||||| |||||||||||||  ||||||||||||||||   |||| | | |||||||| || |||  |||||||||| |  ||||||    
T  36437254 cactaatattaaaaagacagacattaaatgagggataaaaaagtcttttaagcaataactat-ccttaaaagttgtgacattttcttataaataggacca 36437352  T
Q  127 aattttttattgaaaattttcctata 152  Q
    ||  |||| |||||||||||| ||||    
T  36437353 aaactttttttgaaaattttcttata 36437378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 147
Target Start/End: Complemental strand, 42745637 - 42745518
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacca 126  Q
    ||||||||||| |||| ||| | ||||||||||  |||||| || |||||||  |||| | ||| | ||||||| |||  |||||||||| |  ||||||    
T  42745637 cactaatattaaaaaggcaatccttaaatgagggataaaaa-gtattttaaacaataattatacttcaaaaattgtgacattttcttataaataggacca 42745539  T
Q  127 aattttttattgaaaattttc 147  Q
    |||||||| |||||| |||||    
T  42745538 aatttttttttgaaatttttc 42745518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 171
Target Start/End: Complemental strand, 19780313 - 19780181
Alignment:
Q  39 aaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggaccaaattttttattg 138  Q
    ||||| ||||||||||||||| ||| ||||||||||||||  |||||| || ||||||| ||   | |||||||||||||  |||||||||||||| |||    
T  19780313 aaagagaaacattaaatgagggttagaaaagtcttttaaacaataaatatatcttaaaagttgaaactttttcttatatataggaccaaatttttttttg 19780214  T
Q  139 aaaattttcctataaataacaccggagggagta 171  Q
    ||||||||| |||| |||  | |||||||||||    
T  19780213 aaaattttcttatatatagaatcggagggagta 19780181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 26 - 171
Target Start/End: Complemental strand, 9425587 - 9425440
Alignment:
Q  26 tcactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttctt---atatactgg 122  Q
    |||||| ||| | ||||| ||||||||||||||||||||||||||||||||||  |||||| ||||| |||| || ||||||||| ||   ||| | |||    
T  9425587 tcactattatgaaaaagataaacattaaatgaggattaaaaaagtcttttaaacaataaatatacctcaaaagttgtgattttttttttttataaattgg 9425488  T
Q  123 accaaattttttattgaaaattttcctataaataacaccggagggagta 171  Q
    | ||| ||| || |||||||||||  ||||||||| ||| |||||||||    
T  9425487 atcaattttgtt-ttgaaaattttgttataaataagacctgagggagta 9425440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 6657972 - 6657903
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaa 96  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||| ||||||  ||||||||||||||||    
T  6657972 cactaatattaaaaagacaaacattaaatgagggttagaaaagtcatttaaacaataaatgtaccttaaa 6657903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 180433 - 180345
Alignment:
Q  28 actaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttata 116  Q
    |||||||||| ||||||||||||||||| |||  || |||||||||||||   |||| |  | |||||||||| |||| ||||||||||    
T  180433 actaatattaaaaagacaaacattaaataaggggtataaaagtcttttaagcaataactacatcttaaaaattgtgatattttcttata 180345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 34837207 - 34837255
Alignment:
Q  30 taatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaa 78  Q
    |||||||| |||||||| |||||||| |||  |||||||||||||||||    
T  34837207 taatattaaaaagacaagcattaaataaggggtaaaaaagtcttttaaa 34837255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 169
Target Start/End: Complemental strand, 54864018 - 54863874
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacca 126  Q
    ||||||||||  |||||  |||||||||||||  ||| ||||| ||||||||  ||||||||||||||||| || ||| ||||||||||| |  ||||||    
T  54864018 cactaatattgaaaagatcaacattaaatgagagttagaaaagccttttaaacaataaatgtaccttaaaagttgtgactttttcttataaataggacca 54863919  T
Q  127 a--attttttattgaaaattttcctataaataacaccggagggag 169  Q
    |   |||||| |||||||||||| ||||||||  |||||||||||    
T  54863918 attttttttttttgaaaattttcttataaatagaaccggagggag 54863874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 21128193 - 21128101
Alignment:
Q  24 actcactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttata 116  Q
    |||||||||||| | ||||| |||||| |||||||| ||  ||||||||||||||  |||||| ||| |||||| ||||||  ||||||||||    
T  21128193 actcactaatataaaaaagataaacataaaatgagggttggaaaagtcttttaaaaaataaatatacattaaaagttatgacattttcttata 21128101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 18838845 - 18838769
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatga 104  Q
    ||||||||||| ||||| || ||||||||||||  || ||||||||||||||  |||| | |||||||||| ||||||    
T  18838845 cactaatattaaaaagataatcattaaatgagg-gtagaaaagtcttttaaacaataattataccttaaaagttatga 18838769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 25376895 - 25376968
Alignment:
Q  24 actcactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaa 97  Q
    |||||| ||||||  |||||  |||||||||||||| ||| ||||||||||||||  |||| | ||||||||||    
T  25376895 actcacaaatattgaaaagatcaacattaaatgagggttagaaaagtcttttaaacaataattataccttaaaa 25376968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 68892 - 68841
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaa 78  Q
    ||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  68892 cactaatattaaaacgacaaacattaaatgaggaataaaaaagtcttttaaa 68841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 18705090 - 18704968
Alignment:
Q  30 taatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggaccaaat 129  Q
    |||||||| ||| | ||||||||||| | |  |||||||||||||||| | |||| |  ||||||||| ||||||| ||||||||||   |||||||||     
T  18705090 taatattaaaaacaaaaacattaaataaagggtaaaaaagtcttttaagtaataactacaccttaaaagttatgatgttttcttataatttggaccaaag 18704991  T
Q  130 tttttattgaaaattttcctata 152  Q
     |||| |||||||||||| ||||    
T  18704990 atttttttgaaaattttcttata 18704968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 173
Target Start/End: Original strand, 3629262 - 3629409
Alignment:
Q  26 tcactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggacc 125  Q
    |||||||||||| ||| |||  |||||||| |||  || ||||||||||||| | |||| |  ||||||||| || |||  |||||||||| | |||||     
T  3629262 tcactaatattaaaaatacagtcattaaattagggatacaaaagtcttttaagtaataactacaccttaaaagttgtgacattttcttataaattggaca 3629361  T
Q  126 aaattttttattgaaaattttcctataaataacaccggagggagtata 173  Q
    |||  |||| || ||||||||| ||||   || |||||||||||||||    
T  3629362 aaaactttttttaaaaattttcttatattaaagaccggagggagtata 3629409  T

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Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 11983635 - 11983686
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaa 78  Q
    ||||||||||| ||||| |||||||||||||||  ||||||| |||||||||    
T  11983635 cactaatattaaaaagagaaacattaaatgaggggtaaaaaaatcttttaaa 11983686  T

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Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 17686308 - 17686237
Alignment:
Q  46 aacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatga-ttttttcttata 116  Q
    ||||||||| ||||||| ||||||||||||| ||  |||||  ||||||||| |||||| ||||||||||||    
T  17686308 aacattaaaggaggattgaaaaagtcttttatatagtaaatacaccttaaaagttatgacttttttcttata 17686237  T

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Target: scaffold1809 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 551 - 640
Alignment:
Q  27 cactaatattagaaagacaaacattaaatgaggattaaaaaagtcttttaaatcataaatgtaccttaaaaattatgattttttcttata 116  Q
    ||||||||||| || ||||| ||||||||||||  |||||||||||||||||  |||| |  ||||||||  || ||| |||||||||||    
T  551 cactaatattaaaacgacaatcattaaatgagggataaaaaagtcttttaaacaataactacaccttaaatgttgtgactttttcttata 640  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 38931 - 39031
Alignment:
Q  72 ttttaaatcataaatgtaccttaaaaattatgattttttcttatatactggaccaaattttttattgaaaattttcctat-aaataacaccggagggagt 170  Q
    |||||||  |||||| || |||||||||| ||| ||||||||||| |   ||||||| ||||| |||| ||||||| ||| |||||| ||||||||||||    
T  38931 ttttaaacaataaatatatcttaaaaattgtgactttttcttataaataagaccaaacttttt-ttgagaattttcttataaaataagaccggagggagt 39029  T
Q  171 at 172  Q
    ||    
T  39030 at 39031  T

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