View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13051_low_12 (Length: 352)
Name: NF13051_low_12
Description: NF13051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13051_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 18 - 325
Target Start/End: Original strand, 4092859 - 4093166
Alignment:
| Q |
18 |
tgatgaatctaagttcatatgcatgaccagcttgaaaatggttgagnnnnnnnaattgtctgagttgtgtctttttgatgaattagacctagaattcatg |
117 |
Q |
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| T |
4092859 |
tgatgaatctaagttcatatgcatgaccagcttgaaaatggttgagtttttttaattgtctgagttgtgtctttttgatgaattagacttagaattcatg |
4092958 |
T |
|
| Q |
118 |
cttttttatggatgatataagtgggacaagagactaaatcagttgacaactagacaacaatttcttacaaatacttttgaattatcaacaaagattgatc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
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| T |
4092959 |
cttttttatggatgatataagtgggacaagagactaaatcagttgacaactagacaacaatttcttacgaatacttttgaattatcgacaaagattgatc |
4093058 |
T |
|
| Q |
218 |
tagtagaagatgttaaactcccttaacgtggcgaaccaaaattcgagtttcaaatgaaagagatgtttccattcagtgtctggcacacattaaatagaat |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||| |||||| ||||||||||||||| |||||||| |
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| T |
4093059 |
tagtagaagatgttaaactcccttaacgtggcgaaccaaaattcaagtttcaactgaaagagatatttacattcaatgtctggcacacattgaatagaat |
4093158 |
T |
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| Q |
318 |
tatctctg |
325 |
Q |
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|||||||| |
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| T |
4093159 |
tatctctg |
4093166 |
T |
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