View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13051_low_20 (Length: 239)
Name: NF13051_low_20
Description: NF13051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13051_low_20 |
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Alignment Details
Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 14562631 - 14562414
Alignment:
| Q |
4 |
tatatataccgtatttgagtggcaatataataagcatatttaaaggtgtaattcttgattgattttctacaaggtgtagtaaattgtaatgttttatcct |
103 |
Q |
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| T |
14562631 |
tatacataccgtatttgagtggcaatataataagcatatttaaaggtgtaattcttgattgattttctacaaggtgtagtaaattgtaatgttttatcct |
14562532 |
T |
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| Q |
104 |
aaagtgacgtggttgatagtttgtcattcataaccttaggaagtgtcgcgatacgtttatgctcatgactaaaccatataattttttcggtgatacactt |
203 |
Q |
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| T |
14562531 |
aaggtgacgtggttgatagtttgtcattcataatcttaagaagtgtcgcgatacgtttatgctcatgactaaaccagataattttttcggtgatacactt |
14562432 |
T |
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| Q |
204 |
ttcaatgcattttcgaat |
221 |
Q |
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|||||||||||||||||| |
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| T |
14562431 |
ttcaatgcattttcgaat |
14562414 |
T |
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