View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13051_low_8 (Length: 432)

Name: NF13051_low_8
Description: NF13051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13051_low_8
NF13051_low_8
[»] chr7 (49 HSPs)
chr7 (85-339)||(4467137-4467399)
chr7 (245-335)||(30064286-30064376)
chr7 (245-336)||(17911287-17911378)
chr7 (245-336)||(4983421-4983512)
chr7 (259-336)||(4461050-4461127)
chr7 (259-336)||(11484169-11484246)
chr7 (258-332)||(4540910-4540984)
chr7 (94-171)||(17911430-17911507)
chr7 (227-339)||(38877042-38877154)
chr7 (259-335)||(19515713-19515789)
chr7 (279-336)||(680302-680359)
chr7 (259-336)||(21005811-21005888)
chr7 (265-336)||(649126-649197)
chr7 (245-336)||(15522686-15522777)
chr7 (265-336)||(15707580-15707651)
chr7 (262-336)||(4312897-4312971)
chr7 (270-336)||(14942073-14942139)
chr7 (270-336)||(15369666-15369732)
chr7 (283-336)||(1462231-1462284)
chr7 (279-323)||(4256948-4256992)
chr7 (265-336)||(8880345-8880416)
chr7 (265-336)||(9192481-9192552)
chr7 (245-336)||(9194328-9194419)
chr7 (265-336)||(16463565-16463636)
chr7 (265-336)||(48355929-48356000)
chr7 (265-339)||(33612608-33612682)
chr7 (265-323)||(35964582-35964640)
chr7 (283-336)||(9004292-9004345)
chr7 (276-336)||(783083-783143)
chr7 (276-336)||(19364141-19364201)
chr7 (265-336)||(4307527-4307598)
chr7 (276-331)||(5840392-5840447)
chr7 (285-336)||(10204348-10204399)
chr7 (265-336)||(16897626-16897697)
chr7 (265-336)||(46274052-46274123)
chr7 (270-336)||(25181314-25181380)
chr7 (279-336)||(6257836-6257893)
chr7 (279-336)||(12561620-12561677)
chr7 (279-336)||(12567354-12567411)
chr7 (279-336)||(13755319-13755376)
chr7 (279-336)||(16077138-16077195)
chr7 (258-331)||(23293989-23294062)
chr7 (279-336)||(41781476-41781533)
chr7 (283-336)||(48713135-48713188)
chr7 (279-331)||(12678539-12678591)
chr7 (279-331)||(20624301-20624353)
chr7 (279-331)||(20628178-20628230)
chr7 (279-335)||(33609373-33609429)
chr7 (279-331)||(34390348-34390400)
[»] chr6 (61 HSPs)
chr6 (210-336)||(18973329-18973455)
chr6 (210-336)||(24393175-24393302)
chr6 (245-339)||(20463987-20464081)
chr6 (237-336)||(15471429-15471528)
chr6 (237-336)||(15171885-15171984)
chr6 (259-336)||(12658279-12658356)
chr6 (259-336)||(12660771-12660848)
chr6 (227-336)||(15161878-15161987)
chr6 (245-336)||(17794233-17794324)
chr6 (262-336)||(20222182-20222256)
chr6 (227-336)||(20222606-20222716)
chr6 (262-336)||(22116166-22116240)
chr6 (227-336)||(22116590-22116700)
chr6 (259-336)||(13217608-13217685)
chr6 (259-336)||(29253650-29253727)
chr6 (258-336)||(19613083-19613161)
chr6 (259-332)||(25507312-25507385)
chr6 (259-336)||(26138378-26138455)
chr6 (244-336)||(3923368-3923460)
chr6 (265-336)||(25963582-25963653)
chr6 (265-336)||(25968229-25968300)
chr6 (245-336)||(31965887-31965977)
chr6 (259-336)||(23574963-23575041)
chr6 (258-331)||(12993609-12993682)
chr6 (279-336)||(23348509-23348566)
chr6 (245-338)||(24545914-24546006)
chr6 (259-339)||(18399941-18400021)
chr6 (245-332)||(25031509-25031596)
chr6 (265-336)||(25948982-25949053)
chr6 (245-324)||(28734440-28734519)
chr6 (258-336)||(8603206-8603284)
chr6 (258-336)||(18822595-18822673)
chr6 (279-336)||(23517658-23517716)
chr6 (259-336)||(26017623-26017701)
chr6 (259-336)||(26156996-26157074)
chr6 (279-336)||(4740678-4740734)
chr6 (283-336)||(5950009-5950062)
chr6 (258-339)||(14077547-14077628)
chr6 (279-336)||(18234147-18234204)
chr6 (279-336)||(25402771-25402828)
chr6 (276-336)||(18195834-18195894)
chr6 (276-336)||(18854351-18854411)
chr6 (279-335)||(26821574-26821630)
chr6 (258-321)||(20994074-20994137)
chr6 (265-336)||(32542917-32542988)
chr6 (277-331)||(1625862-1625916)
chr6 (94-152)||(15471256-15471314)
chr6 (258-336)||(18448474-18448552)
chr6 (258-320)||(23516999-23517060)
chr6 (258-320)||(27566111-27566172)
chr6 (292-336)||(5398893-5398938)
chr6 (279-336)||(12657637-12657694)
chr6 (279-332)||(17284370-17284423)
chr6 (266-331)||(19564186-19564251)
chr6 (279-336)||(25614977-25615033)
chr6 (258-339)||(29360017-29360098)
chr6 (279-336)||(30244957-30245014)
chr6 (279-331)||(2181699-2181751)
chr6 (279-331)||(19270203-19270254)
chr6 (276-336)||(21574191-21574251)
chr6 (295-339)||(25923738-25923782)
[»] scaffold0074 (1 HSPs)
scaffold0074 (227-336)||(23073-23182)
[»] chr4 (35 HSPs)
chr4 (108-336)||(5675126-5675364)
chr4 (245-336)||(22181327-22181418)
chr4 (245-336)||(33331353-33331444)
chr4 (276-336)||(9488701-9488761)
chr4 (245-336)||(5513938-5514029)
chr4 (245-336)||(11922719-11922810)
chr4 (245-336)||(16212644-16212735)
chr4 (265-336)||(24125560-24125631)
chr4 (94-171)||(12346123-12346201)
chr4 (265-336)||(11902965-11903036)
chr4 (270-336)||(13621998-13622064)
chr4 (94-171)||(5513813-5513890)
chr4 (279-336)||(38651853-38651910)
chr4 (265-336)||(15409710-15409781)
chr4 (265-336)||(45234036-45234107)
chr4 (276-336)||(11502071-11502131)
chr4 (259-331)||(11889336-11889408)
chr4 (277-336)||(3772556-3772615)
chr4 (245-304)||(23793942-23794001)
chr4 (258-336)||(18241932-18242009)
chr4 (258-320)||(36654622-36654683)
chr4 (258-320)||(55798097-55798158)
chr4 (279-336)||(40053-40110)
chr4 (279-336)||(9856901-9856958)
chr4 (258-331)||(12844631-12844704)
chr4 (279-336)||(16374957-16375014)
chr4 (279-336)||(18286715-18286772)
chr4 (279-336)||(18292279-18292336)
chr4 (279-336)||(31593552-31593608)
chr4 (279-331)||(3418806-3418858)
chr4 (279-339)||(16951616-16951676)
chr4 (279-331)||(17995837-17995889)
chr4 (279-331)||(20059490-20059541)
chr4 (279-335)||(21102552-21102607)
chr4 (279-331)||(25145940-25145992)
[»] chr1 (32 HSPs)
chr1 (245-339)||(20861101-20861195)
chr1 (247-336)||(16385230-16385319)
chr1 (120-212)||(23298687-23298780)
chr1 (259-335)||(25405314-25405390)
chr1 (245-332)||(16382370-16382457)
chr1 (245-336)||(23298534-23298625)
chr1 (262-336)||(26191916-26191990)
chr1 (259-336)||(30819373-30819450)
chr1 (265-336)||(16431225-16431296)
chr1 (94-152)||(26192127-26192185)
chr1 (245-336)||(16148750-16148841)
chr1 (265-336)||(17716409-17716480)
chr1 (265-336)||(26134864-26134935)
chr1 (265-336)||(52236211-52236282)
chr1 (279-336)||(13799786-13799842)
chr1 (283-336)||(20411916-20411969)
chr1 (279-336)||(28206672-28206729)
chr1 (276-336)||(2385954-2386014)
chr1 (245-293)||(21918546-21918594)
chr1 (276-336)||(27911636-27911696)
chr1 (259-314)||(39286917-39286972)
chr1 (285-336)||(44537921-44537972)
chr1 (94-151)||(20860920-20860978)
chr1 (258-331)||(18885660-18885733)
chr1 (279-336)||(28764202-28764259)
chr1 (279-336)||(48255969-48256026)
chr1 (279-331)||(8653461-8653513)
chr1 (276-336)||(16485012-16485072)
chr1 (279-331)||(18816078-18816130)
chr1 (279-331)||(21792678-21792730)
chr1 (170-198)||(23298630-23298658)
chr1 (279-331)||(49379992-49380044)
[»] chr3 (47 HSPs)
chr3 (210-336)||(16703479-16703605)
chr3 (238-336)||(8686184-8686282)
chr3 (245-336)||(11870136-11870227)
chr3 (94-163)||(11870008-11870077)
chr3 (245-336)||(8531618-8531709)
chr3 (245-336)||(41546087-41546178)
chr3 (245-338)||(13601400-13601493)
chr3 (265-336)||(3250416-3250487)
chr3 (265-336)||(14661124-14661195)
chr3 (283-336)||(19567375-19567428)
chr3 (283-336)||(22038593-22038646)
chr3 (94-179)||(41545925-41546010)
chr3 (265-336)||(3245392-3245463)
chr3 (265-336)||(25054692-25054763)
chr3 (258-336)||(13094240-13094318)
chr3 (258-336)||(13664810-13664887)
chr3 (258-336)||(17766411-17766489)
chr3 (279-336)||(14495170-14495227)
chr3 (259-332)||(17022955-17023028)
chr3 (258-331)||(19067736-19067809)
chr3 (283-336)||(25766069-25766122)
chr3 (259-336)||(34053917-34053994)
chr3 (279-336)||(40846494-40846551)
chr3 (276-336)||(13098045-13098105)
chr3 (279-323)||(14659024-14659067)
chr3 (265-336)||(11398549-11398620)
chr3 (276-331)||(14445583-14445638)
chr3 (276-331)||(14457630-14457685)
chr3 (258-336)||(13690941-13691018)
chr3 (258-320)||(16333837-16333898)
chr3 (279-333)||(17041432-17041486)
chr3 (258-320)||(20153756-20153817)
chr3 (258-336)||(20156313-20156390)
chr3 (258-331)||(4651138-4651211)
chr3 (279-336)||(7908218-7908275)
chr3 (258-331)||(10546733-10546805)
chr3 (258-331)||(10560138-10560210)
chr3 (258-331)||(12776331-12776404)
chr3 (279-336)||(13298113-13298169)
chr3 (279-336)||(15429601-15429657)
chr3 (259-308)||(20225564-20225613)
chr3 (279-336)||(27879936-27879993)
chr3 (279-336)||(42244883-42244939)
chr3 (279-331)||(13068487-13068539)
chr3 (279-323)||(17209356-17209399)
chr3 (279-335)||(27406906-27406962)
chr3 (258-330)||(47974648-47974719)
[»] chr8 (24 HSPs)
chr8 (259-336)||(24341762-24341839)
chr8 (258-336)||(18007805-18007883)
chr8 (245-336)||(24221907-24221998)
chr8 (245-336)||(19792532-19792623)
chr8 (283-336)||(24966942-24966995)
chr8 (258-336)||(21843321-21843399)
chr8 (258-336)||(22853729-22853806)
chr8 (279-336)||(14162483-14162539)
chr8 (279-336)||(18161679-18161736)
chr8 (259-336)||(21319145-21319222)
chr8 (258-331)||(22030262-22030335)
chr8 (276-336)||(21859150-21859210)
chr8 (258-320)||(1685418-1685479)
chr8 (258-336)||(20263106-20263183)
chr8 (258-331)||(13365914-13365987)
chr8 (283-336)||(14351993-14352046)
chr8 (279-336)||(22991020-22991076)
chr8 (279-336)||(23455279-23455336)
chr8 (258-331)||(45466420-45466493)
chr8 (279-331)||(17612911-17612962)
chr8 (279-331)||(17621093-17621144)
chr8 (279-331)||(19767870-19767922)
chr8 (279-331)||(25461394-25461446)
chr8 (279-339)||(38350247-38350307)
[»] scaffold1559 (1 HSPs)
scaffold1559 (245-336)||(1099-1190)
[»] chr2 (28 HSPs)
chr2 (245-336)||(24321500-24321591)
chr2 (259-336)||(25337459-25337536)
chr2 (245-336)||(24371796-24371887)
chr2 (259-336)||(15583479-15583556)
chr2 (235-336)||(23257354-23257455)
chr2 (265-339)||(32441743-32441817)
chr2 (284-339)||(20851915-20851970)
chr2 (265-336)||(24506990-24507061)
chr2 (259-336)||(29568825-29568902)
chr2 (283-336)||(44997892-44997945)
chr2 (279-335)||(25859000-25859056)
chr2 (270-336)||(20281710-20281776)
chr2 (258-331)||(5500062-5500135)
chr2 (283-336)||(23140338-23140391)
chr2 (283-336)||(23552128-23552181)
chr2 (279-335)||(41653943-41653999)
chr2 (276-336)||(42767669-42767729)
chr2 (94-164)||(23257183-23257253)
chr2 (258-336)||(25043422-25043499)
chr2 (279-336)||(11390833-11390890)
chr2 (279-336)||(11407494-11407551)
chr2 (258-339)||(21344799-21344880)
chr2 (258-331)||(23798719-23798792)
chr2 (279-336)||(25144575-25144632)
chr2 (258-331)||(25370682-25370755)
chr2 (103-151)||(19124513-19124561)
chr2 (279-331)||(20635365-20635417)
chr2 (279-331)||(33181396-33181448)
[»] chr5 (20 HSPs)
chr5 (245-336)||(24164696-24164787)
chr5 (259-336)||(16676794-16676871)
chr5 (283-336)||(25486057-25486110)
chr5 (265-336)||(20967427-20967498)
chr5 (245-336)||(23029935-23030025)
chr5 (259-336)||(2953839-2953916)
chr5 (279-336)||(15059112-15059169)
chr5 (280-336)||(23343897-23343953)
chr5 (245-336)||(22170481-22170572)
chr5 (258-336)||(18484010-18484087)
chr5 (276-336)||(21734902-21734962)
chr5 (276-336)||(23583253-23583313)
chr5 (276-336)||(23600450-23600510)
chr5 (111-161)||(21575413-21575463)
chr5 (278-339)||(31414336-31414397)
chr5 (259-332)||(20104279-20104352)
chr5 (279-336)||(24143541-24143598)
chr5 (279-336)||(28835228-28835284)
chr5 (279-327)||(20725178-20725226)
chr5 (276-336)||(20799444-20799504)
[»] scaffold0264 (1 HSPs)
scaffold0264 (279-336)||(22730-22787)
[»] scaffold0123 (2 HSPs)
scaffold0123 (245-335)||(13853-13943)
scaffold0123 (276-331)||(2236-2291)
[»] scaffold0213 (2 HSPs)
scaffold0213 (245-333)||(21360-21447)
scaffold0213 (265-336)||(26654-26725)
[»] scaffold0471 (1 HSPs)
scaffold0471 (265-336)||(10148-10219)
[»] scaffold0360 (1 HSPs)
scaffold0360 (262-336)||(60-134)
[»] scaffold0064 (1 HSPs)
scaffold0064 (262-336)||(48469-48543)
[»] scaffold0001 (3 HSPs)
scaffold0001 (274-336)||(520444-520506)
scaffold0001 (276-336)||(49655-49715)
scaffold0001 (279-331)||(425337-425389)
[»] scaffold0713 (1 HSPs)
scaffold0713 (259-336)||(6975-7052)
[»] scaffold0046 (1 HSPs)
scaffold0046 (258-339)||(20032-20112)
[»] scaffold0014 (1 HSPs)
scaffold0014 (245-325)||(167826-167906)
[»] scaffold0916 (1 HSPs)
scaffold0916 (265-336)||(3169-3240)
[»] scaffold0447 (2 HSPs)
scaffold0447 (265-335)||(6120-6190)
scaffold0447 (265-335)||(10734-10804)
[»] scaffold0383 (1 HSPs)
scaffold0383 (265-335)||(8729-8799)
[»] scaffold0031 (4 HSPs)
scaffold0031 (265-339)||(100045-100119)
scaffold0031 (265-336)||(22943-23014)
scaffold0031 (279-336)||(102145-102201)
scaffold0031 (279-339)||(77541-77601)
[»] scaffold0098 (1 HSPs)
scaffold0098 (283-336)||(44606-44659)
[»] scaffold0096 (1 HSPs)
scaffold0096 (265-336)||(38313-38384)
[»] scaffold0066 (1 HSPs)
scaffold0066 (258-336)||(61661-61739)
[»] scaffold0057 (1 HSPs)
scaffold0057 (265-339)||(20835-20909)
[»] scaffold0317 (1 HSPs)
scaffold0317 (258-331)||(14498-14571)
[»] scaffold0115 (1 HSPs)
scaffold0115 (258-331)||(18117-18190)
[»] scaffold0092 (1 HSPs)
scaffold0092 (283-336)||(19889-19942)
[»] scaffold0058 (1 HSPs)
scaffold0058 (279-336)||(61528-61585)
[»] scaffold1225 (1 HSPs)
scaffold1225 (279-339)||(2024-2084)
[»] scaffold0258 (1 HSPs)
scaffold0258 (279-331)||(21973-22025)
[»] scaffold0138 (1 HSPs)
scaffold0138 (276-336)||(27101-27161)
[»] scaffold0072 (1 HSPs)
scaffold0072 (279-331)||(61189-61241)
[»] scaffold0056 (1 HSPs)
scaffold0056 (279-339)||(36786-36846)
[»] scaffold0032 (1 HSPs)
scaffold0032 (276-336)||(117494-117554)
[»] scaffold0197 (1 HSPs)
scaffold0197 (265-332)||(9218-9285)
[»] scaffold0381 (1 HSPs)
scaffold0381 (276-330)||(14812-14865)
[»] scaffold0301 (1 HSPs)
scaffold0301 (258-320)||(2648-2709)
[»] scaffold0272 (1 HSPs)
scaffold0272 (258-320)||(284-345)
[»] scaffold0251 (1 HSPs)
scaffold0251 (265-335)||(19283-19353)
[»] scaffold0228 (2 HSPs)
scaffold0228 (258-336)||(17385-17463)
scaffold0228 (258-336)||(27337-27415)
[»] scaffold0011 (2 HSPs)
scaffold0011 (258-336)||(164201-164278)
scaffold0011 (274-339)||(172429-172494)
[»] scaffold0009 (1 HSPs)
scaffold0009 (258-336)||(151166-151244)
[»] scaffold0347 (1 HSPs)
scaffold0347 (279-336)||(2397-2454)
[»] scaffold0334 (1 HSPs)
scaffold0334 (259-336)||(6915-6992)
[»] scaffold0071 (1 HSPs)
scaffold0071 (279-336)||(32581-32637)
[»] scaffold0012 (2 HSPs)
scaffold0012 (259-332)||(49553-49626)
scaffold0012 (276-336)||(101699-101759)
[»] scaffold0005 (1 HSPs)
scaffold0005 (279-336)||(300450-300506)
[»] scaffold1354 (1 HSPs)
scaffold1354 (279-331)||(702-754)
[»] scaffold1208 (1 HSPs)
scaffold1208 (276-336)||(2252-2312)
[»] scaffold0861 (1 HSPs)
scaffold0861 (279-331)||(1100-1152)
[»] scaffold0674 (1 HSPs)
scaffold0674 (279-331)||(2123-2175)
[»] scaffold0557 (1 HSPs)
scaffold0557 (279-331)||(1963-2015)
[»] scaffold0500 (1 HSPs)
scaffold0500 (276-336)||(12547-12606)
[»] scaffold0374 (1 HSPs)
scaffold0374 (276-336)||(4711-4771)
[»] scaffold0351 (1 HSPs)
scaffold0351 (276-336)||(6379-6439)
[»] scaffold0232 (1 HSPs)
scaffold0232 (279-331)||(19804-19856)
[»] scaffold0192 (1 HSPs)
scaffold0192 (279-331)||(4247-4299)
[»] scaffold0116 (1 HSPs)
scaffold0116 (279-331)||(37562-37614)
[»] scaffold0051 (1 HSPs)
scaffold0051 (283-335)||(34260-34312)
[»] scaffold0042 (1 HSPs)
scaffold0042 (279-331)||(22076-22128)
[»] scaffold0022 (1 HSPs)
scaffold0022 (279-331)||(107361-107413)
[»] scaffold0017 (1 HSPs)
scaffold0017 (279-331)||(189944-189996)
[»] scaffold0006 (1 HSPs)
scaffold0006 (292-336)||(28803-28847)
[»] scaffold0004 (1 HSPs)
scaffold0004 (276-320)||(356369-356413)


Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 85 - 339
Target Start/End: Original strand, 4467137 - 4467399
Alignment:
Q  85 gactcatcattaggttagaaataaattaaacagacagcttgtccgagaagcaaaagcaacaaaaggagtgctgtggtggtagcacgggcggtgccttgaa 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4467137 gactcatcattaggttagaaataaattaaacagacagcttgtccgagaagcaaaagcaacaaaaggagtgctgtggtggtggcacgggcggtgccttgaa 4467236  T
Q  185 ggcacgggccgtgcaagctctctggtggc--------tttgaattgttggaggcacgagctgtgtctgtatttttgcacataatcttcatatatttggcc 276  Q
    |||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4467237 ggcacgggccgtgcaagctctctggtggctttttggctttgaattgttggaggcacgagctgtgtctgtatttttgcacataatcttcatatatttggcc 4467336  T
Q  277 caaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4467337 caaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 4467399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 245 - 335
Target Start/End: Original strand, 30064286 - 30064376
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgtt 335  Q
    |||||||||||||||||||||||| |||||||| ||||| ||| |||||||||||||||||||| ||||| |||||||| |||||||||||    
T  30064286 tatttttgcacataatcttcatatttttggcccgaatcaactcaaaatctcctttcttttgctccaagactcaatctttaaaatatttgtt 30064376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 245 - 336
Target Start/End: Complemental strand, 17911378 - 17911287
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||  ||||||| ||| |||||||| ||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  17911378 tatttttgcaccaaatcttcgtatttttggcccgaatcagctccaaatctcgtttcttttgctccaagactcaatctttcaaatatttgttc 17911287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 4983421 - 4983512
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||  ||||||| ||| |||  ||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  4983421 tatttttgcaccaaatcttcgtatttttttcccgaatcagctccaaatctcctttctttttctcaaagactcaatctttcaaatatttgttc 4983512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 4461050 - 4461127
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| |||||| |  ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||    
T  4461050 atcttcatatttttggcacggatcagctccaattctcctttcttttgctccaagacgcaatctttgaaatatttgttc 4461127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 11484169 - 11484246
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||  ||||||  |||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  11484169 atcttcatacttttggcataaatcagctccaaatctcctttcttttgctctgagactcaatctttcaaatatttgttc 11484246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 4540984 - 4540910
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatattt 332  Q
    ||||||||||| ||||| || ||||||||||||||||| |||||||||||| |||||  ||||||||||||||||    
T  4540984 aatcttcatatttttggtccgaatcagctccaaatctcttttcttttgctccaagactaaatctttcaaatattt 4540910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 17911507 - 17911430
Alignment:
Q  94 ttaggttagaaataaattaaacagacagcttgtccgagaagcaaaagcaacaaaaggagtgctgtggtggtagcacgg 171  Q
    |||||| ||||||||| |||| || ||||||||| |||||||||||||| ||||||||| ||||||||||| ||||||    
T  17911507 ttaggtcagaaataaactaaataggcagcttgtcagagaagcaaaagcagcaaaaggagggctgtggtggtggcacgg 17911430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 339
Target Start/End: Complemental strand, 38877154 - 38877042
Alignment:
Q  227 aggcacgagctgtgtctg-tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttca 325  Q
    ||||||||| |||||||  ||||||||||||||||||  |||| ||| |||  |||||||| |||||||| |||||||||||| ||||| ||||||||||    
T  38877154 aggcacgagttgtgtctcatatttttgcacataatctatatatttttagcctcaatcagctacaaatctc-tttcttttgctccaagactcaatctttca 38877056  T
Q  326 aatatttgttcttg 339  Q
     |||||| ||||||    
T  38877055 tatattttttcttg 38877042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 335
Target Start/End: Original strand, 19515713 - 19515789
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgtt 335  Q
    |||||||||| |||||| | |||||||||||| | ||||||||||||||| ||||| | ||||||||||||||||||    
T  19515713 atcttcatatttttggcacgaatcagctccaattatcctttcttttgctccaagactccatctttcaaatatttgtt 19515789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 680302 - 680359
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||| ||||||||||    
T  680302 aatcagctccaaatcccctttcttttgctccaagactcaatctttcatatatttgttc 680359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 21005811 - 21005888
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| ||||||   ||| |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||    
T  21005811 atcttcatatttttggcatgaataagctccaattctcctttcttttgctccaagactccatctttcaaatatttgttc 21005888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 649126 - 649197
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  649126 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 649197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 336
Target Start/End: Complemental strand, 15522777 - 15522686
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||  |||||||||| ||| |||  ||||||||| |||  |||||||| |||||| ||||| |||||||||| ||||||||||    
T  15522777 tatttttgcacaagatcttcatatttttagcctcaatcagctctaaaattcctttctcttgctccaagactcaatctttcatatatttgttc 15522686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 15707580 - 15707651
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  15707580 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 15707651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 4312971 - 4312897
Alignment:
Q  262 ttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| |||||| | |||||||||||| | ||||||||||||||| ||||| ||||||||  |||||||||||    
T  4312971 ttcatatttttggcacgaatcagctccaattttcctttcttttgctccaagactcaatctttagaatatttgttc 4312897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 14942073 - 14942139
Alignment:
Q  270 tttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  14942073 tttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 14942139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 15369666 - 15369732
Alignment:
Q  270 tttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  15369666 tttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 15369732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 1462284 - 1462231
Alignment:
Q  283 agctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||    
T  1462284 agctccaattctcctttcttttgctccaagactccatctttcaaatatttgttc 1462231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 323
Target Start/End: Original strand, 4256948 - 4256992
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatcttt 323  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||    
T  4256948 aatcagctccaaatctcctttcttttgctccaagactcaatcttt 4256992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 8880345 - 8880416
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| |||| |||||||||||| ||||| ||||||||  |||||||||||    
T  8880345 atatttttggcacgaatcagctccaattctcttttcttttgctccaagactcaatctttagaatatttgttc 8880416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 9192552 - 9192481
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| ||| ||||||||||||| ||||| ||||||||  |||||||||||    
T  9192552 atatttttggcacgaatcagctccaattcttctttcttttgctccaagactcaatctttagaatatttgttc 9192481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 9194328 - 9194419
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||   |||||| |||| ||||||   ||| |||| ||| ||||||||||||||||| ||||| | |||||||||||||||||||    
T  9194328 tatttttgcatgaaatctttatatttttggcatgaataagcttcaattctcctttcttttgctccaagactccatctttcaaatatttgttc 9194419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 16463565 - 16463636
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | ||| |||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  16463565 atatttttggcacgaattagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 16463636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 48355929 - 48356000
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| | ||||||||||||||| ||||| ||||||||  |||||||||||    
T  48355929 atatttttggcacgaatcagctccaattatcctttcttttgctccaagactcaatctttagaatatttgttc 48356000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 339
Target Start/End: Original strand, 33612608 - 33612682
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    |||| |||||| | ||||| |||||| |||| |||||||||||| ||||| ||||||||  ||||||||||||||    
T  33612608 atatttttggcacgaatcaactccaattctcatttcttttgctccaagactcaatctttagaatatttgttcttg 33612682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 35964582 - 35964640
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatcttt 323  Q
    |||| |||||| |||||||||||||  ||||||||||||||||| ||||| ||||||||    
T  35964582 atatttttggcacaaatcagctccagttctcctttcttttgctccaagactcaatcttt 35964640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 9004345 - 9004292
Alignment:
Q  283 agctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||| ||| ||||||||||| | ||||| |||||||||||||||||||||    
T  9004345 agctccaattcttctttcttttgccccaagactcaatctttcaaatatttgttc 9004292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 783083 - 783143
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  783083 ccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 783143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 19364201 - 19364141
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  19364201 ccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 19364141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 4307598 - 4307527
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | ||||||||| || |||||||||||||| || ||||| ||||||||  |||||||||||    
T  4307598 atatttttggcacgaatcagctctaattctcctttcttttgttccaagactcaatctttagaatatttgttc 4307527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 331
Target Start/End: Complemental strand, 5840447 - 5840392
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  5840447 ccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 5840392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 336
Target Start/End: Complemental strand, 10204399 - 10204348
Alignment:
Q  285 ctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  10204399 ctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 10204348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 16897626 - 16897697
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | ||||| |||||| ||||||||||||||||| |||||  |||||||  |||||||||||    
T  16897626 atatttttggcacgaatcaactccaattctcctttcttttgctccaagactaaatcttttgaatatttgttc 16897697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 46274123 - 46274052
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| ||||||  |||||| |||||| ||||||||||||||||| |||||  |||||||  |||||||||||    
T  46274123 atatttttggcagaaatcaactccaattctcctttcttttgctccaagactaaatcttttgaatatttgttc 46274052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 25181314 - 25181380
Alignment:
Q  270 tttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||| | |||||||||||| |||| |||||||||||| || || ||||||||  |||||||||||    
T  25181314 tttggcacgaatcagctccaattctcatttcttttgctccaaaactcaatctttagaatatttgttc 25181380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 6257836 - 6257893
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||| |||||||||| |||||  ||||  | |||||||||||||||||||    
T  6257836 aatcagctccaagtctcctttctattgctgcaagattccatctttcaaatatttgttc 6257893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 12561677 - 12561620
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  12561677 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 12561620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 12567411 - 12567354
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  12567411 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 12567354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 13755319 - 13755376
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  13755319 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 13755376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 16077138 - 16077195
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  16077138 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 16077195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 23293989 - 23294062
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||| ||| ||||  || ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  23293989 aatcttcgtatttttgcaccgaatcagctccaaaacccctttcttttgctccaagacccaatccatcaaatatt 23294062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 41781533 - 41781476
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  41781533 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 41781476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 48713188 - 48713135
Alignment:
Q  283 agctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||| || |||| |||||||||||| ||||| | |||||||||||||||||||    
T  48713188 agctctaattctcttttcttttgctccaagactccatctttcaaatatttgttc 48713135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 12678591 - 12678539
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  12678591 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 12678539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 20624353 - 20624301
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| || || |||||| |||||||||    
T  20624353 aatcagctccaaaacccctttcttttgctccaatactcaatctatcaaatatt 20624301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 20628230 - 20628178
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| || || |||||| |||||||||    
T  20628230 aatcagctccaaaacccctttcttttgctccaatactcaatctatcaaatatt 20628178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 335
Target Start/End: Complemental strand, 33609429 - 33609373
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgtt 335  Q
    ||||||||| || ||||||||||||||||| |||||  |||||||  ||||||||||    
T  33609429 aatcagctcaaattctcctttcttttgctccaagactaaatcttttgaatatttgtt 33609373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 34390400 - 34390348
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  34390400 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 34390348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 6e-44; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 210 - 336
Target Start/End: Complemental strand, 18973455 - 18973329
Alignment:
Q  210 tggctttgaattgttggaggcacgagctgtgtctgtatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctca 309  Q
    |||||||||||||||||||||||  |||||||||||||||||||| | ||||||||||| |||||||||||||||||| ||||| ||||||||||||||     
T  18973455 tggctttgaattgttggaggcacaggctgtgtctgtatttttgcatagaatcttcatatttttggcccaaatcagctcgaaatcacctttcttttgctcc 18973356  T
Q  310 aagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||||| |||||||||||    
T  18973355 aagacgcaatctttcgaatatttgttc 18973329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 210 - 336
Target Start/End: Original strand, 24393175 - 24393302
Alignment:
Q  210 tggctttgaattgttggaggcacgagctgtgtctgtatttttgcacataatcttcatatattt-ggcccaaatcagctccaaatctcctttcttttgctc 308  Q
    |||||||||||||||||||||||  ||||||||| |||||||||| ||||| ||||||| ||| ||||||||||||||||||||| | ||||||||||||    
T  24393175 tggctttgaattgttggaggcacaggctgtgtctctatttttgcatataattttcatattttttggcccaaatcagctccaaatcacatttcttttgctc 24393274  T
Q  309 aaagacgcaatctttcaaatatttgttc 336  Q
     ||||||| ||||||| |||||||||||    
T  24393275 caagacgctatctttcgaatatttgttc 24393302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 245 - 339
Target Start/End: Complemental strand, 20464081 - 20463987
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    |||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||    
T  20464081 tatttttgcaaataatcttcatatttttggcccgaatcagctccaaatctcctttcttttgctccaagactcaatctttgaaatatttgttcttg 20463987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 237 - 336
Target Start/End: Original strand, 15471429 - 15471528
Alignment:
Q  237 tgtgtctgtatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||  |||| |||||||| || |||||||||    
T  15471429 tgtgtctgtatttttgcacagaatcttcatatttttggcccgaatcaactccaaatctcctttcttttgctccgagactcaatctttgaactatttgttc 15471528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 237 - 336
Target Start/End: Complemental strand, 15171984 - 15171885
Alignment:
Q  237 tgtgtctgtatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||| ||||||||||||  |||| |||||||| || |||||||||    
T  15171984 tgtgtctgtatttttgcacagaatcttcatatttttggcccgaatcaactccaaatctcatttcttttgctccgagactcaatctttgaactatttgttc 15171885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 12658279 - 12658356
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||| |||| |||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  12658279 atctttatatttttggcacaaatcagctccaaatctcctttcttttgctccaagactcaatctttcaaatatttgttc 12658356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 12660771 - 12660848
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||| |||| |||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  12660771 atctttatatttttggcacaaatcagctccaaatctcctttcttttgctccaagactcaatctttcaaatatttgttc 12660848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 227 - 336
Target Start/End: Complemental strand, 15161987 - 15161878
Alignment:
Q  227 aggcacgagctgtgtctgtatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaa 326  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||| |||  ||||| |||||||||||| |||||||| || ||||| |||||||| ||    
T  15161987 aggcacgggctgtgtctgtatttttgcacagaatcttcatatttttagcctgaatcaactccaaatctccgttcttttgttccaagactcaatctttgaa 15161888  T
Q  327 atatttgttc 336  Q
     |||||||||    
T  15161887 ctatttgttc 15161878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 17794233 - 17794324
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||  ||||||  ||| ||| |||||||| |||||||||||||||||||||||||| |||||  ||||||||||||||||||||    
T  17794233 tatttttgcaccaaatctttgtatttttagcccaaattagctccaaatctcctttcttttgctccaagactaaatctttcaaatatttgttc 17794324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 20222256 - 20222182
Alignment:
Q  262 ttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| |||||||  ||||||||||||||||| |||||||||||| ||||| |||||||||| ||||||||||    
T  20222256 ttcatatttttggcctcaatcagctccaaatctcatttcttttgctccaagactcaatctttcatatatttgttc 20222182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 336
Target Start/End: Complemental strand, 20222716 - 20222606
Alignment:
Q  227 aggcacgagctgtgtctg-tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttca 325  Q
    ||||||| ||||||| || ||||||||||||  |||||||||| ||| |||  |||||||||||||||| ||||||||| ||| |||||  |||||||||    
T  20222716 aggcacgggctgtgtttgatatttttgcacaagatcttcatattttttgcctcaatcagctccaaatcttctttcttttactcgaagactaaatctttca 20222617  T
Q  326 aatatttgttc 336  Q
     ||||||||||    
T  20222616 tatatttgttc 20222606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 22116240 - 22116166
Alignment:
Q  262 ttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| |||||||  ||||||||||||||||| |||||||||||| ||||| |||||||||| ||||||||||    
T  22116240 ttcatatttttggcctcaatcagctccaaatctcatttcttttgctccaagactcaatctttcatatatttgttc 22116166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 336
Target Start/End: Complemental strand, 22116700 - 22116590
Alignment:
Q  227 aggcacgagctgtgtctg-tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttca 325  Q
    ||||||| ||||||| || ||||||||||||  |||||||||| ||| |||  |||||||||||||||| ||||||||| ||| |||||  |||||||||    
T  22116700 aggcacgggctgtgtttgatatttttgcacaagatcttcatattttttgcctcaatcagctccaaatcttctttcttttactcgaagactaaatctttca 22116601  T
Q  326 aatatttgttc 336  Q
     ||||||||||    
T  22116600 tatatttgttc 22116590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 13217608 - 13217685
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| |||||| ||||||||||  |||||||||||||||||||| |||||  ||||||| ||||||||||||    
T  13217608 atcttcatatttttggcacaaatcagctgtaaatctcctttcttttgctccaagactaaatctttgaaatatttgttc 13217685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 29253727 - 29253650
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| |||||| | |||||||||||| | ||||||||||||||| ||||| | |||||||||||||||||||    
T  29253727 atcttcatatttttggcacgaatcagctccaattatcctttcttttgctccaagactccatctttcaaatatttgttc 29253650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 336
Target Start/End: Original strand, 19613083 - 19613161
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||| |||||  | |||||||||||||||  ||||||||||||| |||||| ||||||| ||||||||||||    
T  19613083 aatcttcatatttttggtacgaatcagctccaaatcagctttcttttgctccaagacgtaatctttgaaatatttgttc 19613161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 25507385 - 25507312
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatattt 332  Q
    |||||||||| |||||| | |||||||||||| ||||||||||||| ||| ||||| | |||||||||||||||    
T  25507385 atcttcatatttttggcacgaatcagctccaattctcctttctttttctccaagactccatctttcaaatattt 25507312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 26138455 - 26138378
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| |||||| | ||| ||||| || ||||||||||||||||| ||||| | |||||||||||||||||||    
T  26138455 atcttcatatttttggcacgaattagctcaaattctcctttcttttgctccaagactccatctttcaaatatttgttc 26138378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 336
Target Start/End: Complemental strand, 3923460 - 3923368
Alignment:
Q  244 gtatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||  ||||||| ||| ||| |  | ||||||||||||||||| |||||||||||| ||||| ||||||||  |||||||||||    
T  3923460 gtatttttgcaccaaatcttcgtatttttagttcgaatcagctccaaatctcatttcttttgctccaagactcaatctttagaatatttgttc 3923368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 25963653 - 25963582
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  25963653 atatttttggcacgaatcagctccaattctcctttcttttgctctaagactcaatctttagaatatttgttc 25963582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 25968300 - 25968229
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  25968300 atatttttggcacgaatcagctccaattctcctttcttttgctctaagactcaatctttagaatatttgttc 25968229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 31965887 - 31965977
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||  |||||||||| |||||||  ||||| |||||||||||| ||||||||||| ||||  |||| ||||| ||||||||||    
T  31965887 tatttttgcacaagatcttcatatttttggcctcaatcaactccaaatctcc-ttcttttgctccaagattcaatttttcatatatttgttc 31965977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 23574963 - 23575041
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatc-tttcaaatatttgttc 336  Q
    |||||||||| ||||||   |||||||||||| ||||||||||| ||||| ||||| ||||| ||||||||||||||||    
T  23574963 atcttcatatttttggcatgaatcagctccaattctcctttcttctgctccaagactcaatcttttcaaatatttgttc 23575041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 12993609 - 12993682
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||| ||| ||||  || ||||||||||||| | |||||||||||||||||||| |||||| |||||||||    
T  12993609 aatcttcgtatttttgcaccgaatcagctccaaaacccctttcttttgctcaaagactcaatctatcaaatatt 12993682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 23348509 - 23348566
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||||||| |||||||||||| ||||| |||| ||| ||||||||||||    
T  23348509 aatcagctccaaatctcatttcttttgctccaagactcaatttttgaaatatttgttc 23348566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 245 - 338
Target Start/End: Original strand, 24545914 - 24546006
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttctt 338  Q
    |||||||||||  ||||||| ||| ||   ||| ||||||||||||||| |||||||||||||| ||||| ||||||||  |||||||||||||    
T  24545914 tatttttgcaccgaatcttcgtattttcatcccgaatcagctccaaatc-cctttcttttgctccaagactcaatctttagaatatttgttctt 24546006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 18399941 - 18400021
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    |||||||||| |||||||  ||||||||| || | ||||||||||| ||| ||||| ||| ||||||||||||| ||||||    
T  18399941 atcttcatatttttggccggaatcagctctaattatcctttctttttctccaagactcaaactttcaaatatttattcttg 18400021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 332
Target Start/End: Original strand, 25031509 - 25031596
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatattt 332  Q
    |||||||||||  ||||||| ||| ||| | |  ||||||||||||||||| |||||||||||  ||||| |||||||| ||||||||    
T  25031509 tatttttgcaccaaatcttcgtatttttagtctgaatcagctccaaatctcatttcttttgctgcaagactcaatctttaaaatattt 25031596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 25949053 - 25948982
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | ||||| |||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  25949053 atatttttggcacgaatcaactccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 25948982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 324
Target Start/End: Original strand, 28734440 - 28734519
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttc 324  Q
    ||||||||||   ||||||| ||| ||  |||| |||||||||||||||||||||||||||||| |||||  ||||||||    
T  28734440 tatttttgcattcaatcttcgtattttcagcccgaatcagctccaaatctcctttcttttgctccaagactaaatctttc 28734519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 8603284 - 8603206
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| ||| |||  ||| |||||||||| ||||  ||||||||||||||||||| |||||| ||||||||| ||||    
T  8603284 aatcttcgtatttttcacccgaatcagctcctaatcctctttcttttgctcaaagactcaatctatcaaatattcgttc 8603206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 18822673 - 18822595
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| ||| ||||  |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  18822673 aatcttcgtatttttgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 18822595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 23517658 - 23517716
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatc-tttcaaatatttgttc 336  Q
    |||||||||||| | ||||||||||||||| ||||| ||||| ||||||||||||||||    
T  23517658 aatcagctccaattatcctttcttttgctccaagactcaatcttttcaaatatttgttc 23517716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 26017701 - 26017623
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttctttt-gctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| |||||| | ||| |||||||| |||||||| |||| |||| ||||| | |||||||||||||||||||    
T  26017701 atcttcatatttttggcacgaattagctccaattctcctttttttttgctccaagactccatctttcaaatatttgttc 26017623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 26157074 - 26156996
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttctttt-gctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| |||||| | ||| |||||||| |||||||| |||| |||| ||||| | |||||||||||||||||||    
T  26157074 atcttcatatttttggcacgaattagctccaattctcctttttttttgctccaagactccatctttcaaatatttgttc 26156996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 4740734 - 4740678
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||  |||||||||||    
T  4740734 aatcagctccaaatc-cctttcttttgctccaagacgcaacctttagaatatttgttc 4740678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 5950009 - 5950062
Alignment:
Q  283 agctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||| ||||||||||||||||  ||||| | |||||||||||||||||||    
T  5950009 agctccaattctcctttcttttgcttcaagactccatctttcaaatatttgttc 5950062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 339
Target Start/End: Original strand, 14077547 - 14077628
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    ||||||| ||| ||||  || ||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| |||||||    
T  14077547 aatcttcgtatttttgcaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcttg 14077628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 18234147 - 18234204
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||| |||| |||| ||||||| ||||| | |||||||||||||||||||    
T  18234147 aatcagctccaattctcttttcctttgctccaagactccatctttcaaatatttgttc 18234204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 25402771 - 25402828
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||| | |||||||||||||||||||| |||||  ||||||||| ||||    
T  25402771 aatcagctccaaaacccctttcttttgctcaaagactcaatccatcaaatattcgttc 25402828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 18195834 - 18195894
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  18195834 ccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 18195894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 18854411 - 18854351
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  18854411 ccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 18854351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 335
Target Start/End: Complemental strand, 26821630 - 26821574
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgtt 335  Q
    ||||||||||||||| | |||||||||||| || || |||||||| |||||||||||    
T  26821630 aatcagctccaaatcacatttcttttgctccaaaacacaatctttaaaatatttgtt 26821574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 321
Target Start/End: Original strand, 20994074 - 20994137
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatct 321  Q
    ||||||| ||| ||||  |||||||||||||||| | |||||||||||||| ||||| ||||||    
T  20994074 aatcttcgtatttttgctccaaatcagctccaaaacccctttcttttgctccaagactcaatct 20994137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 32542988 - 32542917
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | ||| |||||||| ||||||||||||||||| |||||  |||||||  |||||||||||    
T  32542988 atatttttggcacgaattagctccaattctcctttcttttgctccaagactaaatctttagaatatttgttc 32542917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 331
Target Start/End: Complemental strand, 1625916 - 1625862
Alignment:
Q  277 caaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  1625916 caaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 1625862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 15471256 - 15471314
Alignment:
Q  94 ttaggttagaaataaattaaacagacagcttgtccgagaagcaaaagcaacaaaaggag 152  Q
    |||||||||||||||| ||||||   ||||||||  ||||||||||||| |||||||||    
T  15471256 ttaggttagaaataaactaaacaagtagcttgtcgaagaagcaaaagcagcaaaaggag 15471314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 18448552 - 18448474
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| ||| ||||  |||||||||||||||| | ||||||||||||||  |||| |||||  ||||||||| ||||    
T  18448552 aatcttcgtatttttgctccaaatcagctccaaaacccctttcttttgctcctagactcaatccatcaaatattcgttc 18448474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 23516999 - 23517060
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatc 320  Q
    ||||||||||| ||||  || ||||||||||||||| |||||||||||||| ||||| |||||    
T  23516999 aatcttcatatttttgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatc 23517060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 27566111 - 27566172
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatc 320  Q
    ||||||||||| ||||  || ||||||||||||||| |||||||||||||| ||||| |||||    
T  27566111 aatcttcatatttttgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatc 27566172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 5398938 - 5398893
Alignment:
Q  292 tctcctttcttttgctc-aaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||||||| |||||| | |||||||||||||||||||    
T  5398938 tctcctttcttttgctccaaagactccatctttcaaatatttgttc 5398893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 12657637 - 12657694
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||  ||||||||||||||| ||||| |||||  ||||||||| ||||    
T  12657637 aatcagctccaaaattcctttcttttgctccaagactcaatccatcaaatattcgttc 12657694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 17284370 - 17284423
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatattt 332  Q
    |||||||||||| |||| |||||||||||| ||||| ||||||||  |||||||    
T  17284370 aatcagctccaattctcatttcttttgctctaagactcaatctttagaatattt 17284423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 331
Target Start/End: Original strand, 19564186 - 19564251
Alignment:
Q  266 tatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||  |||||||||||| ||| | |||||||||||||| |||||  |||| ||||||||||    
T  19564186 tatatttgcaccaaatcagctctaaaacccctttcttttgctccaagacttaatccttcaaatatt 19564251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 25615033 - 25614977
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||||| |||||||||||||| ||||| |||||  ||||||||| ||||    
T  25615033 aatcagctccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttc 25614977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 339
Target Start/End: Complemental strand, 29360098 - 29360017
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    ||||||| ||| |||  ||| |||||||||  ||||  ||||||||||||| |||||  ||||| |||||||||||||||||    
T  29360098 aatcttcgtatttttcacccgaatcagctcataatcctctttcttttgctccaagacttaatctatcaaatatttgttcttg 29360017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 30245014 - 30244957
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| ||||  ||||||||||||| ||||| |||||| ||||||||| ||||    
T  30245014 aatcagctcctaatcctctttcttttgctccaagactcaatctatcaaatattcgttc 30244957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 2181751 - 2181699
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  2181751 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 2181699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Original strand, 19270203 - 19270254
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||||| |||||||||||||| ||||| |||||  |||||||||    
T  19270203 aatcagctccaaatc-cctttcttttgctccaagactcaatccgtcaaatatt 19270254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 21574191 - 21574251
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| | | |||||||||||| ||||| |||||  ||||||||| ||||    
T  21574191 ccaaatcagctccaaaacccatttcttttgctccaagactcaatccatcaaatattcgttc 21574251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 25923738 - 25923782
Alignment:
Q  295 cctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    |||||||||||||| ||||| ||||||||  ||||||||||||||    
T  25923738 cctttcttttgctctaagactcaatctttagaatatttgttcttg 25923782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 227 - 336
Target Start/End: Original strand, 23073 - 23182
Alignment:
Q  227 aggcacgagctgtgtctgtatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaa 326  Q
    ||||||| |||||||||||||||||||| | ||||||||||| |||||||| ||||||||||||||| |||||||||||||| ||||||||||||||| |    
T  23073 aggcacgggctgtgtctgtatttttgcataaaatcttcatatttttggcccgaatcagctccaaatcacctttcttttgctccaagacgcaatctttcga 23172  T
Q  327 atatttgttc 336  Q
    ||||||||||    
T  23173 atatttgttc 23182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 108 - 336
Target Start/End: Complemental strand, 5675364 - 5675126
Alignment:
Q  108 aattaaacagacagcttgtccgagaagcaaaagcaacaaaaggagtgctgtggtggtagcacgggcggtgcct-tgaaggcacgggccgtgcaagctctc 206  Q
    |||||||||| || ||||||||||||| ||||||| ||||| ||||| ||||||||| |||||| || ||||  || |||||| |||||||| | |||||    
T  5675364 aattaaacaggcaacttgtccgagaagtaaaagcagcaaaatgagtgttgtggtggtggcacggtcg-tgccactggaggcacaggccgtgccaactctc 5675266  T
Q  207 tgg----------tggctttgaattgttggaggcacgagctgtgtctg-tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctc 295  Q
    ||           |||||||||||||||| ||||||| |||||||||| |||||||||| | ||||||||||| |||| | | |||||||| ||||| ||    
T  5675265 tgacttggctttttggctttgaattgttg-aggcacgggctgtgtctgatatttttgcatagaatcttcatatttttgccgcgaatcagcttcaaatttc 5675167  T
Q  296 ctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
     |||||||||||| ||||| |||||||||||||||||||||    
T  5675166 atttcttttgctccaagactcaatctttcaaatatttgttc 5675126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 22181327 - 22181418
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||  ||||||| ||| |||||||| |||||||||| ||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  22181327 tatttttgcaccaaatcttcgtatttttggcccgaatcagctccgaatctcctttcttttgctccaagactcaatctttgaaatatttgttc 22181418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 33331353 - 33331444
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||| |||||   |||||| ||||| ||||||    
T  33331353 tatttttgcacataatcttcatatttttggccctaatcagctccaaatctcatttcttttgctccaagacttgatctttaaaatacttgttc 33331444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 9488701 - 9488761
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  9488701 ccaaatcagctccaaatctcctttcttttgctccaagactcaatctttgaaatatttgttc 9488761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 5513938 - 5514029
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||   ||| ||| ||| |||||||| ||||||||| ||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  5513938 tatttttgcatcaaattttcttatttttggcccgaatcagctctaaatctcatttcttttgctccaagactcaatctttcaaatatttgttc 5514029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 11922719 - 11922810
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||  ||||||||||| |||||||  ||| | |||||||||||||||||||||||| || || |||||||| ||||||||||||    
T  11922719 tatttttgcaccaaatcttcatatttttggcctgaataaactccaaatctcctttcttttgctccaatacacaatctttgaaatatttgttc 11922810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 16212644 - 16212735
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||  |||||||||| ||||| |  ||||| |||||||| ||||||||||||||| ||||| |||||||||| ||||||||||    
T  16212644 tatttttgcacaagatcttcatatttttggtctcaatcaactccaaatttcctttcttttgctccaagactcaatctttcatatatttgttc 16212735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 24125560 - 24125631
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||    
T  24125560 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttaaaatatttgttc 24125631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 12346123 - 12346201
Alignment:
Q  94 ttaggttagaaataaa-ttaaacagacagcttgtccgagaagcaaaagcaacaaaaggagtgctgtggtggtagcacgg 171  Q
    |||||| ||||||||| |||||||||||||||||   ||||||||||| | ||||||||||||||||||||| ||||||    
T  12346123 ttaggtcagaaataaacttaaacagacagcttgtagaagaagcaaaagtagcaaaaggagtgctgtggtggttgcacgg 12346201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 11902965 - 11903036
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  11902965 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 11903036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 13622064 - 13621998
Alignment:
Q  270 tttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  13622064 tttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 13621998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 5513813 - 5513890
Alignment:
Q  94 ttaggttagaaataaattaaacagacagcttgtccgagaagcaaaagcaacaaaaggagtgctgtggtggtagcacgg 171  Q
    |||||| ||||||||| |||||||||||||||||  ||||||||||||| |||||| |   |||||||||| ||||||    
T  5513813 ttaggtcagaaataaactaaacagacagcttgtcgaagaagcaaaagcagcaaaagaaagtctgtggtggtggcacgg 5513890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 38651910 - 38651853
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  38651910 aatcagctccaattctcctttcttttgctccaagactcaatcttttgaatatttgttc 38651853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 15409781 - 15409710
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | ||||||||| || ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  15409781 atatttttggcacgaatcagctcaaattctcctttcttttgctccaagactcaatctttagaatatttgttc 15409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 45234036 - 45234107
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| |||||||| |||||||| ||||| ||||||||  |||||||||||    
T  45234036 atatttttggcacgaatcagctccaattctccttttttttgctccaagactcaatctttagaatatttgttc 45234107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 11502071 - 11502131
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||| |||||| |||||||||||||||| ||||| |||||  ||||||||| ||||    
T  11502071 ccaaatcagttccaaaactcctttcttttgctccaagactcaatccatcaaatattcgttc 11502131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 331
Target Start/End: Original strand, 11889336 - 11889408
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    |||||||||| ||||||   ||| |||||||| ||||||||||||||||| ||||| |||||  |||||||||    
T  11889336 atcttcatatttttggcatgaataagctccaattctcctttcttttgctccaagactcaatccatcaaatatt 11889408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 336
Target Start/End: Original strand, 3772556 - 3772615
Alignment:
Q  277 caaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||| |||| |||||||||||| |||||  |||||||  |||||||||||    
T  3772556 caaatcagctccaattctcttttcttttgctccaagactaaatcttttgaatatttgttc 3772615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 304
Target Start/End: Original strand, 23793942 - 23794001
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttctttt 304  Q
    ||||||| ||||  |||||||||| |||||||  ||||||||||||||||||||| ||||    
T  23793942 tatttttacacaagatcttcatatttttggcctcaatcagctccaaatctcctttttttt 23794001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 18242009 - 18241932
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| ||| ||||  |||||||| ||||||| | |||||||||||||| ||||| |||||| ||||||||| ||||    
T  18242009 aatcttcgtatttttgctccaaatcaactccaaacc-cctttcttttgctccaagactcaatctatcaaatattcgttc 18241932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 36654622 - 36654683
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatc 320  Q
    ||||||||||| ||||  || ||||||||||||||| |||||||||||||| ||||| |||||    
T  36654622 aatcttcatatttttgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatc 36654683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 55798158 - 55798097
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatc 320  Q
    ||||||||||| ||||  || ||||||||||||||| |||||||||||||| ||||| |||||    
T  55798158 aatcttcatatttttgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatc 55798097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 40053 - 40110
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||  ||||  ||||||||||||||||||| |||||| ||||||||| ||||    
T  40053 aatcagctcataatcctctttcttttgctcaaagactcaatctatcaaatattcgttc 40110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 9856958 - 9856901
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| ||||||||||||| | ||| |||||| ||||| ||| ||||    
T  9856958 aatcagctccaaatcttctttcttttgctccatgactcaatctatcaaacattcgttc 9856901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 12844704 - 12844631
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||| || |  || ||||||||||||||| | |||||||||||| ||||| |||||  |||||||||    
T  12844704 aatcttcatattttcgtaccgaatcagctccaaatcccttttcttttgctccaagactcaatccatcaaatatt 12844631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 16374957 - 16375014
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||| ||||||| |||||||||||||||| ||||| |||||  ||||||||| ||||    
T  16374957 aatcatctccaaaactcctttcttttgctccaagactcaatccatcaaatattcgttc 16375014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 18286772 - 18286715
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  18286772 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 18286715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 18292336 - 18292279
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  18292336 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 18292279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 31593608 - 31593552
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||| |||| |||||||||||| || || |||||||| ||||||||||||    
T  31593608 aatcagctccaattctcatttcttttgctc-aatactcaatctttaaaatatttgttc 31593552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 3418858 - 3418806
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  3418858 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 3418806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 16951676 - 16951616
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    ||||||||||||| |  ||||||||||||| ||||| |||||  ||||||||| |||||||    
T  16951676 aatcagctccaaaacctctttcttttgctccaagactcaatccatcaaatattcgttcttg 16951616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 17995889 - 17995837
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  17995889 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 17995837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Original strand, 20059490 - 20059541
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||| |||||||||    
T  20059490 aatcagctccaaacc-cctttcttttgctccaagactcaatctatcaaatatt 20059541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 335
Target Start/End: Original strand, 21102552 - 21102607
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgtt 335  Q
    ||||||||||||||| |||||||||||||| ||||| |||||  || ||||||||||    
T  21102552 aatcagctccaaatc-cctttcttttgctccaagactcaatccatccaatatttgtt 21102607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 25145992 - 25145940
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  25145992 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 25145940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 245 - 339
Target Start/End: Original strand, 20861101 - 20861195
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    |||||||||||||||||||||||| |||||||| ||||||||| |||| || |||||||||||| ||||| |||||||| |||||||||||||||    
T  20861101 tatttttgcacataatcttcatatttttggcccgaatcagctcaaaatatcatttcttttgctccaagactcaatctttaaaatatttgttcttg 20861195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 247 - 336
Target Start/End: Original strand, 16385230 - 16385319
Alignment:
Q  247 tttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||  |||||||||| |||||||||||||||||||||| ||| |||||||||||| ||||| |||||||| ||||||||||||    
T  16385230 tttttgcacaagatcttcatatttttggcccaaatcagctccaaacctcatttcttttgctccaagactcaatctttaaaatatttgttc 16385319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 23298780 - 23298687
Alignment:
Q  120 agcttgtccgagaagcaaaagcaacaaaaggagtgctgtggtggtagcacgggcggtgccttgaaggcacgggccgtg-caagctctctggtgg 212  Q
    ||||| || |||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||    
T  23298780 agcttttcggagaagcaaaagcagcaaaaggagtgttgtggtggtggcacgggctgtgccttgaaggcacgggccgtgccaagctctctagtgg 23298687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 259 - 335
Target Start/End: Original strand, 25405314 - 25405390
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgtt 335  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  25405314 atcttcatatttttggcacaaatcagctccaaatctcctttcttttgctccaagactcaatctttgaaatatttgtt 25405390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 245 - 332
Target Start/End: Original strand, 16382370 - 16382457
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatattt 332  Q
    ||||||||||||  |||||||||| |||||| ||||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||    
T  16382370 tatttttgcacaagatcttcatatttttggcacaaatcagctccaaatctcatttcttttgctccaagactcaatctttgaaatattt 16382457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 245 - 336
Target Start/End: Complemental strand, 23298625 - 23298534
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||||||| |||||| |||  ||||||||||||| |||||||||||||||||||| ||||  |||||||| ||||||| ||||    
T  23298625 tatttttgcacataatcatcatattttttccccaaatcagctctaaatctcctttcttttgctccaagattcaatcttttaaatattcgttc 23298534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 26191990 - 26191916
Alignment:
Q  262 ttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| |||||||| ||||| |||||||||| ||||||||||||| ||||| |||||||||| ||||||||||    
T  26191990 ttcatatttttggcccgaatcacctccaaatcttctttcttttgctccaagactcaatctttcatatatttgttc 26191916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 30819373 - 30819450
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| ||||||   |||||||||||| |||| |||||||||||| ||||| |||||||||||||||||||||    
T  30819373 atcttcatatttttggcatgaatcagctccaattctcatttcttttgctctaagactcaatctttcaaatatttgttc 30819450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 16431296 - 16431225
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  16431296 atatttttggcacgaatcagctccaattctcctttcttttgctccaagacccaatctttagaatatttgttc 16431225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 26192185 - 26192127
Alignment:
Q  94 ttaggttagaaataaattaaacagacagcttgtccgagaagcaaaagcaacaaaaggag 152  Q
    |||||| ||||||||| |||||||  |||||||||||||||||||| ||||||||||||    
T  26192185 ttaggtcagaaataaactaaacaggaagcttgtccgagaagcaaaaacaacaaaaggag 26192127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 16148750 - 16148841
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||| || |||| ||| ||| | || ||||||||||||||||| ||||||||| || ||||| || |||||  |||||||||||    
T  16148750 tatttttgcacaaaaccttcgtatttttagtccgaatcagctccaaatctcatttcttttgttccaagactcattctttagaatatttgttc 16148841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 17716480 - 17716409
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| || |||||||||||||| ||||| ||||||||  |||||||||||    
T  17716480 atatttttggcacgaatcagctccaattcgcctttcttttgctccaagactcaatctttagaatatttgttc 17716409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 26134864 - 26134935
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | ||||||||| || ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  26134864 atatttttggcacgaatcagctcaaattctcctttcttttgctctaagactcaatctttagaatatttgttc 26134935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 52236211 - 52236282
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| ||||||||||||||||| |||||  |||||||  |||||||||||    
T  52236211 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactgaatctttagaatatttgttc 52236282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 13799786 - 13799842
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||||  |||||||||||    
T  13799786 aatcagctccaaatc-cctttcttttgctccaagactcaatctttataatatttgttc 13799842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 20411969 - 20411916
Alignment:
Q  283 agctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||| |||| |||||||||||| ||||| | |||||||||||||||||||    
T  20411969 agctccaattctcgtttcttttgctccaagactccatctttcaaatatttgttc 20411916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 28206672 - 28206729
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||| |||||||||||||||| ||||| |||||  ||||||||| ||||    
T  28206672 aatcagctccaaaactcctttcttttgctccaagactcaatccatcaaatattcgttc 28206729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 2386014 - 2385954
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  2386014 ccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 2385954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 21918594 - 21918546
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatc 293  Q
    ||||||||||||| |||||||||| |||||||  |||||||||||||||    
T  21918594 tatttttgcacatgatcttcatatttttggcctgaatcagctccaaatc 21918546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 27911636 - 27911696
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  27911636 ccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 27911696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 314
Target Start/End: Original strand, 39286917 - 39286972
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagac 314  Q
    |||||||||| ||||||   ||| |||||||||||||||||||||||||| |||||    
T  39286917 atcttcatatttttggcatgaataagctccaaatctcctttcttttgctccaagac 39286972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 336
Target Start/End: Complemental strand, 44537972 - 44537921
Alignment:
Q  285 ctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  44537972 ctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 44537921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 20860920 - 20860978
Alignment:
Q  94 ttaggttagaaataaa-ttaaacagacagcttgtccgagaagcaaaagcaacaaaagga 151  Q
    |||||| ||||||||| ||||||||||||||||||  |||||||||||||  |||||||    
T  20860920 ttaggtcagaaataaacttaaacagacagcttgtcgaagaagcaaaagcagtaaaagga 20860978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 18885660 - 18885733
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||| ||| ||||  || ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  18885660 aatcttcgtatttttgcaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 18885733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 28764202 - 28764259
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| |||||||  ||||||||||||| || || ||||||||||| |||||||||    
T  28764202 aatcagccccaaatcctctttcttttgctccaaaactcaatctttcaattatttgttc 28764259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 48256026 - 48255969
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||| ||| || ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  48256026 aatcaactctaattctcctttcttttgctccaagactcaatctttagaatatttgttc 48255969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 8653513 - 8653461
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  8653513 aatcagctccaaaccccctttcttttgctccaagactcaatccatcaaatatt 8653461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 16485072 - 16485012
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||| |||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  16485072 ccaaatcagttccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 16485012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 18816130 - 18816078
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  18816130 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 18816078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Original strand, 21792678 - 21792730
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  21792678 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 21792730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 198
Target Start/End: Complemental strand, 23298658 - 23298630
Alignment:
Q  170 gggcggtgccttgaaggcacgggccgtgc 198  Q
    |||||||||||||||||||||||||||||    
T  23298658 gggcggtgccttgaaggcacgggccgtgc 23298630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Original strand, 49379992 - 49380044
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| ||| |||||||||||| ||||| |||||  |||||||||    
T  49379992 aatcagctccaaaactcatttcttttgctccaagactcaatccatcaaatatt 49380044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 210 - 336
Target Start/End: Complemental strand, 16703605 - 16703479
Alignment:
Q  210 tggctttgaattgttggaggcacgagctgtgtctg-tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctc 308  Q
    |||||||||||||| | ||||||| |||||||||  |||||||||||| ||||||||||| |||  ||| |||||||||||||||||||||||||| |||    
T  16703605 tggctttgaattgtag-aggcacgggctgtgtctaatatttttgcacagaatcttcatatgtttaccccgaatcagctccaaatctcctttcttttactc 16703507  T
Q  309 aaagacgcaatctttcaaatatttgttc 336  Q
     ||||| |||||||  ||||||||||||    
T  16703506 caagactcaatcttagaaatatttgttc 16703479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 238 - 336
Target Start/End: Original strand, 8686184 - 8686282
Alignment:
Q  238 gtgtctgtatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||| |||||||| ||| || |||||||| |||||||| ||||||||||||||| |||||||||||||| | ||| |||||||||||||||||||||    
T  8686184 gtgtctatatttttgaacagaaacttcatatttttggcccgaatcagctccaaatcacctttcttttgctccaggacacaatctttcaaatatttgttc 8686282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 11870136 - 11870227
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||  ||||||| ||| |||||||| ||||||||||| |||||||||||||||||| ||||| |||||||| ||||||||||||    
T  11870136 tatttttgcaccaaatcttcgtatttttggcccgaatcagctccagatctcctttcttttgctccaagactcaatctttgaaatatttgttc 11870227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 11870008 - 11870077
Alignment:
Q  94 ttaggttagaaataaattaaacagacagcttgtccgagaagcaaaagcaacaaaaggagtgctgtggtgg 163  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  11870008 ttaggtcagaaataaactaaacaggcagcttgtccgagaagcaaaagcagcaaaaggagtgctgtggtgg 11870077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 245 - 336
Target Start/End: Complemental strand, 8531709 - 8531618
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||| ||  ||||||| ||| |||||||||||||  |||||||||||||||||||||||| || || |||||||||||||||||||||    
T  8531709 tatttttgtaccaaatcttcgtatttttggcccaaatcgcctccaaatctcctttcttttgctccaaaactcaatctttcaaatatttgttc 8531618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 41546087 - 41546178
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| |||| |||||| |||| ||||| |  ||||||||| |||||||||||||||||||| |||||  ||||||||||||||||||||    
T  41546087 tattttttcacagaatctttatatttttggtctgaatcagctcaaaatctcctttcttttgctccaagactaaatctttcaaatatttgttc 41546178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 13601493 - 13601400
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttctt 338  Q
    |||||||||| |  ||||| |||| ||||||   ||| |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||    
T  13601493 tatttttgcataagatctttatatttttggcatgaataagctccaattctcctttcttttgctccaagactccatctttcaaatatttgttctt 13601400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 3250416 - 3250487
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  3250416 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 3250487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 14661124 - 14661195
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  14661124 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 14661195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 19567375 - 19567428
Alignment:
Q  283 agctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||    
T  19567375 agctccaattctcctttcttttgctccaagactccatctttcaaatatttgttc 19567428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 22038646 - 22038593
Alignment:
Q  283 agctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||    
T  22038646 agctccaattctcctttcttttgctccaagactccatctttcaaatatttgttc 22038593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 179
Target Start/End: Original strand, 41545925 - 41546010
Alignment:
Q  94 ttaggttagaaataaattaaacagacagcttgtccgagaagcaaaagcaacaaaaggagtgctgtggtggtagcacgggcggtgcc 179  Q
    |||||| ||||||||| |||| || ||||||||| ||||||||||||||  ||||| |||| ||||||||| | |||||| |||||    
T  41545925 ttaggtcagaaataaactaaataggcagcttgtcggagaagcaaaagcataaaaagaagtgttgtggtggtggtacgggccgtgcc 41546010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 3245392 - 3245463
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| ||||||||||||| ||| ||||| ||||||||  |||||||||||    
T  3245392 atatttttggcacgaatcagctccaattctcctttcttttactccaagactcaatctttagaatatttgttc 3245463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 25054763 - 25054692
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | ||| |||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  25054763 atatttttggcacgaattagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 25054692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 336
Target Start/End: Original strand, 13094240 - 13094318
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||| || |  |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  13094240 aatcttcatattttcgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 13094318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 13664887 - 13664810
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||| || |  |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||||||||    
T  13664887 aatcttcatattttcgttccaaatcagctccaaacc-cctttcttttgctccaagactcaatccatcaaatatttgttc 13664810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 17766489 - 17766411
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| ||| ||||  |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  17766489 aatcttcgtatttttgcaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 17766411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 14495170 - 14495227
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||| |||| |||||||||||| ||||| ||||||||  |||||||||||    
T  14495170 aatcagctccaattctcgtttcttttgctccaagactcaatctttagaatatttgttc 14495227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 17023028 - 17022955
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatattt 332  Q
    |||||| ||| |||||| |||||||||||||| |||| |||||||||||| || || ||||||||  |||||||    
T  17023028 atcttcttatttttggcacaaatcagctccaattctcatttcttttgctctaatactcaatcttttgaatattt 17022955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 19067809 - 19067736
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||| ||| ||||  |||||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  19067809 aatcttcgtatttttgcaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 19067736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 25766069 - 25766122
Alignment:
Q  283 agctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||| ||||||||||||||||  ||||| | |||||||||||||||||||    
T  25766069 agctccaattctcctttcttttgcttcaagactccatctttcaaatatttgttc 25766122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 34053917 - 34053994
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| ||||||   |||||||||||| |||| |||| ||| ||| ||||| | |||||||||||||||||||    
T  34053917 atcttcatatttttggcatgaatcagctccaattctcatttccttttctccaagactccatctttcaaatatttgttc 34053994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 40846551 - 40846494
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| ||||  ||||||||||||| ||||| |||||| ||||||||||||||    
T  40846551 aatcagctcctaatcctctttcttttgctccaagactcaatctatcaaatatttgttc 40846494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 13098105 - 13098045
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  13098105 ccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 13098045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 323
Target Start/End: Complemental strand, 14659067 - 14659024
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatcttt 323  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||    
T  14659067 aatcagctccaaatc-cctttcttttgctcaaagactcaatcttt 14659024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 11398620 - 11398549
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | ||| |||||||| ||||||||||||||||| ||||| |||||| |  |||||||||||    
T  11398620 atatttttggcacgaattagctccaattctcctttcttttgctccaagactcaatctatagaatatttgttc 11398549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 331
Target Start/End: Original strand, 14445583 - 14445638
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  14445583 ccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 14445638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 331
Target Start/End: Original strand, 14457630 - 14457685
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  14457630 ccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 14457685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 13691018 - 13690941
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||| || |  |||||||||||| ||| | |||||||||||||| ||||| |||||  ||||||||||||||    
T  13691018 aatcttcatattttcgttccaaatcagctctaaacc-cctttcttttgctccaagactcaatccatcaaatatttgttc 13690941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 16333898 - 16333837
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatc 320  Q
    ||||||||||| ||||  || ||||||||||||||| |||||||||||||| ||||| |||||    
T  16333898 aatcttcatatttttgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatc 16333837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 333
Target Start/End: Complemental strand, 17041486 - 17041432
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttg 333  Q
    |||||||||||||||  ||||||||||||| ||||| ||||||||  ||||||||    
T  17041486 aatcagctccaaatcctctttcttttgctccaagactcaatctttagaatatttg 17041432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 20153817 - 20153756
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatc 320  Q
    ||||||||||| ||||  || ||||||||||||||| |||||||||||||| ||||| |||||    
T  20153817 aatcttcatatttttgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatc 20153756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 336
Target Start/End: Original strand, 20156313 - 20156390
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| ||| ||||  |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  20156313 aatcttcgtatttttgctccaaatcagctccaaacc-cctttcttttgctccaagactcaatccatcaaatattcgttc 20156390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 4651211 - 4651138
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||| || |  || ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  4651211 aatcttcatattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 4651138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 7908275 - 7908218
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||  ||||||||| ||| ||||| ||||||||  |||||||||||    
T  7908275 aatcagctccaaatcctctttcttttactcgaagactcaatctttagaatatttgttc 7908218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 10546733 - 10546805
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||| ||| ||||  || ||||||||||||||| |||||||||||||| ||||| |||||  |||||||||    
T  10546733 aatcttcctatttttgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatccatcaaatatt 10546805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 10560138 - 10560210
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||| ||| ||||  || ||||||||||||||| |||||||||||||| ||||| |||||  |||||||||    
T  10560138 aatcttcctatttttgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatccatcaaatatt 10560210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 12776331 - 12776404
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||| || |  || ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  12776331 aatcttcatattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 12776404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 13298169 - 13298113
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||||| |||||||||||||| |||||  ||||  ||||||||||||||    
T  13298169 aatcagctccaaatc-cctttcttttgctccaagacttaatccatcaaatatttgttc 13298113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 15429657 - 15429601
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||||| |||||||||||||| ||||| |||||  ||||||||| ||||    
T  15429657 aatcagctccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttc 15429601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 20225564 - 20225613
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctc 308  Q
    |||||||||| ||||||   |||||||||||| |||||||||||||||||    
T  20225564 atcttcatatttttggcaagaatcagctccaattctcctttcttttgctc 20225613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 27879993 - 27879936
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| ||||  ||||||||||||| ||||| |||||| ||||||||| ||||    
T  27879993 aatcagctcctaatcctctttcttttgctccaagactcaatctatcaaatattcgttc 27879936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 42244883 - 42244939
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||| |||||| |||||||||||||| ||||| ||||||||  |||||||||||    
T  42244883 aatcagcttcaaatc-cctttcttttgctccaagactcaatctttagaatatttgttc 42244939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 13068539 - 13068487
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  13068539 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 13068487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 323
Target Start/End: Complemental strand, 17209399 - 17209356
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatcttt 323  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||||    
T  17209399 aatcagctccaaatc-cctttcttttgctccaagactcaatcttt 17209356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 335
Target Start/End: Complemental strand, 27406962 - 27406906
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgtt 335  Q
    |||||||||||||||   |||||||||||| |||||  ||||||| |||||||||||    
T  27406962 aatcagctccaaatcctttttcttttgctccaagactgaatctttaaaatatttgtt 27406906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 330
Target Start/End: Complemental strand, 47974719 - 47974648
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatat 330  Q
    ||||||| ||| ||||  || ||||||||||||| | |||||||||||||||||||| |||||  ||||||||    
T  47974719 aatcttcgtatttttgctccgaatcagctccaaacc-cctttcttttgctcaaagactcaatccatcaaatat 47974648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 24341839 - 24341762
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  24341839 atcttcatatttttggcacaaatcagctccaaatctcatttcttttgctctaagactcaatctttcaaatatttgttc 24341762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 18007883 - 18007805
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||| |||||| | |||||||||| |||| |||||||||||||| ||||| |||||||| ||||||||||||    
T  18007883 aatcttcatatttttggcacgaatcagctccgaatcacctttcttttgctccaagactcaatctttgaaatatttgttc 18007805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 24221907 - 24221998
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||  |||||||||| |||||||  ||| ||||| |||||||||||||||||||| ||||| | |||||||  ||||||||||    
T  24221907 tatttttgcacaagatcttcatatttttggcctcaattagctctaaatctcctttcttttgctccaagactcgatctttcttatatttgttc 24221998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 19792532 - 19792623
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||  ||||||||||| ||| | || |||||||||| ||||| ||||||||||||| ||||| ||||||||  |||||| ||||    
T  19792532 tatttttgcaccaaatcttcatatttttagtccgaatcagctccgaatcttctttcttttgctctaagactcaatctttagaatattcgttc 19792623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 24966995 - 24966942
Alignment:
Q  283 agctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||    
T  24966995 agctccaattctcctttcttttgctccaagactccatctttcaaatatttgttc 24966942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 336
Target Start/End: Original strand, 21843321 - 21843399
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| |||||| |  |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  21843321 aatcttcgtatattcgttccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 21843399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 22853806 - 22853729
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||| ||||  |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  22853806 aatcttcatatttttgctccaaatcagctccaaacc-cctttcttttgctccaagactcaatccatcaaatattcgttc 22853729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 14162483 - 14162539
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||||  |||||||||||    
T  14162483 aatcagctccaaatc-cctttcttttgctccaagactcaatctttagaatatttgttc 14162539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 18161736 - 18161679
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||| || ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  18161736 aatcagctcaaattctcctttcttttgctccaagactcaatctttagaatatttgttc 18161679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 21319222 - 21319145
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| |||||| | |||||||| ||| |||||||| |||||||| ||||  ||||||||  |||||||||||    
T  21319222 atcttcatatttttggcacgaatcagcttcaattctccttttttttgctccaagattcaatcttttgaatatttgttc 21319145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 22030262 - 22030335
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    |||||||||||||| |  || ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  22030262 aatcttcatatattcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 22030335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 21859150 - 21859210
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  21859150 ccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 21859210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 1685479 - 1685418
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatc 320  Q
    ||||||||||| ||||  || ||||||||||||||| |||||||||||||| ||||| |||||    
T  1685479 aatcttcatatttttgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatc 1685418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 20263183 - 20263106
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| ||| ||||  || ||||||||||||| | |||||||||||||| ||||| |||||| ||||||||| ||||    
T  20263183 aatcttcgtatttttgctccgaatcagctccaaacc-cctttcttttgctccaagactcaatctatcaaatattcgttc 20263106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 13365914 - 13365987
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||| || |  || ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  13365914 aatcttcatattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 13365987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 14351993 - 14352046
Alignment:
Q  283 agctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||| ||||| ||||||||||| ||||| ||||||||  |||||||||||    
T  14351993 agctccaattctcccttcttttgctccaagactcaatctttagaatatttgttc 14352046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 22991076 - 22991020
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||||| |||||||||||||| ||||| |||||| || |||||| ||||    
T  22991076 aatcagctccaaatc-cctttcttttgctccaagactcaatctatccaatattcgttc 22991020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 23455336 - 23455279
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||  ||||||||||||| ||||| |||||| ||||| ||| ||||    
T  23455336 aatcagctccaaatcctctttcttttgctccaagactcaatctatcaaacattcgttc 23455279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 45466493 - 45466420
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||| ||| ||||  || ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  45466493 aatcttcgtatttttgcaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 45466420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 17612962 - 17612911
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||||| |||||||||||||| ||||| |||||  |||||||||    
T  17612962 aatcagctccaaatc-cctttcttttgctccaagactcaatccatcaaatatt 17612911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 17621144 - 17621093
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||||| |||||||||||||| ||||| |||||  |||||||||    
T  17621144 aatcagctccaaatc-cctttcttttgctccaagactcaatccatcaaatatt 17621093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 19767922 - 19767870
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  19767922 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 19767870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 25461446 - 25461394
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  25461446 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 25461394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 38350247 - 38350307
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    |||||||||| || | |||||||||||||| ||||| |||||  ||||||||| |||||||    
T  38350247 aatcagctcccaaacccctttcttttgctccaagactcaatccatcaaatattcgttcttg 38350307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1559 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold1559
Description:

Target: scaffold1559; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 245 - 336
Target Start/End: Complemental strand, 1190 - 1099
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||  ||||||| ||| |||||| | |||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  1190 tatttttgcaccaaatcttcgtatttttggctcgaatcagctccaaatctcctttcttttgctccaagactcaatctttgaaatatttgttc 1099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 5e-23; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 245 - 336
Target Start/End: Complemental strand, 24321591 - 24321500
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||| |||||||||||| | ||| || |||||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||    
T  24321591 tatttttgcacctaatcttcatatttgtgggccgaatcagctccaaatctcctttcttttgctgcaagactcaacctttcaaatatttgttc 24321500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 25337459 - 25337536
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||||||    
T  25337459 atcttcatatttttggcacaaatcagctccaaatctccattcttttgctccaagactcaatcttttaaatatttgttc 25337536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 24371796 - 24371887
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||  |||||||||  |||||||  |||||||||||||||||||||||||| ||| ||||| |||||||||| ||| ||||||    
T  24371796 tatttttgcacaagatcttcatagttttggcctcaatcagctccaaatctcctttctttttctccaagactcaatctttcatatacttgttc 24371887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 15583556 - 15583479
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| |||||| | |||||||||||| |||||||| |||||||| |||| ||||||||| ||||||||||||    
T  15583556 atcttcatatttttggcacgaatcagctccaattctcctttattttgctccaagatgcaatctttgaaatatttgttc 15583479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 336
Target Start/End: Original strand, 23257354 - 23257455
Alignment:
Q  235 gctgtgtctgtatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgt 334  Q
    ||||||||||||||||||| |  ||| ||||||| | ||| || ||||| || ||||||||||||||||| ||| ||||| |||||||| ||||||||||    
T  23257354 gctgtgtctgtatttttgctctaaattttcatatttctgggccgaatcaacttcaaatctcctttcttttactccaagactcaatctttgaaatatttgt 23257453  T
Q  335 tc 336  Q
    ||    
T  23257454 tc 23257455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 339
Target Start/End: Original strand, 32441743 - 32441817
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    |||| |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  ||||||||||||||    
T  32441743 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcttg 32441817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 20851970 - 20851915
Alignment:
Q  284 gctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    ||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||||    
T  20851970 gctccaaatctcccttcttttgctccaagactcaatctttgaaatatttgttcttg 20851915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 24507061 - 24506990
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| |||| |||||||||||||||||| ||||||||  |||||||||||    
T  24507061 atatttttggcacgaatcagctccaattctcttttcttttgctcaaagactcaatctttagaatatttgttc 24506990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 29568825 - 29568902
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| ||||||   ||| |||||||| ||||||||| ||||||| ||||| | |||||||||||||||||||    
T  29568825 atcttcatatttttggcatgaattagctccaattctcctttcctttgctcgaagactccatctttcaaatatttgttc 29568902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 44997945 - 44997892
Alignment:
Q  283 agctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| ||| ||||||||||||||||||||||| | |||||||||||||||||||    
T  44997945 agcttcaattctcctttcttttgctcaaagactccatctttcaaatatttgttc 44997892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 335
Target Start/End: Original strand, 25859000 - 25859056
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgtt 335  Q
    |||||||| ||| ||||||||||||||||| ||||| | ||||||||||||||||||    
T  25859000 aatcagcttcaattctcctttcttttgctccaagactccatctttcaaatatttgtt 25859056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 20281776 - 20281710
Alignment:
Q  270 tttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||| | |||||||||||| ||||||||||||||||| ||||| |||| |||  |||||||||||    
T  20281776 tttggcacgaatcagctccaattctcctttcttttgctccaagactcaatgtttagaatatttgttc 20281710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 5500062 - 5500135
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||| ||| ||||  || ||||||||||||| |||||||||||||||| ||||| |||||  |||||||||    
T  5500062 aatcttcgtatttttgtaccgaatcagctccaaaactcctttcttttgctccaagactcaatccatcaaatatt 5500135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 23140338 - 23140391
Alignment:
Q  283 agctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||| |||| |||||||||||| ||||| | |||||||||||||||||||    
T  23140338 agctccaattctcatttcttttgctccaagactccatctttcaaatatttgttc 23140391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 23552128 - 23552181
Alignment:
Q  283 agctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||| |||| |||||||||||| ||||| | |||||||||||||||||||    
T  23552128 agctccaattctcatttcttttgctccaagactccatctttcaaatatttgttc 23552181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 335
Target Start/End: Original strand, 41653943 - 41653999
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgtt 335  Q
    |||||||||||||||  ||||||||||||| ||||| ||||||||  ||||||||||    
T  41653943 aatcagctccaaatcctctttcttttgctccaagactcaatctttagaatatttgtt 41653999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 42767669 - 42767729
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  42767669 ccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 42767729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 23257183 - 23257253
Alignment:
Q  94 ttaggttagaaataaattaaacagacagcttgtccgagaagcaaaagcaacaaaaggagtgctgtggtggt 164  Q
    |||||| ||||||||| |||||||  ||||||||  ||||||||||||| |||||| ||  ||||||||||    
T  23257183 ttaggtcagaaataaactaaacaggaagcttgtcgaagaagcaaaagcagcaaaagaaggtctgtggtggt 23257253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 336
Target Start/End: Original strand, 25043422 - 25043499
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| ||| ||||  || ||||||||||||| | |||||||||||||| ||||| |||||  ||||||||||||||    
T  25043422 aatcttcgtatttttgctccgaatcagctccaaacc-cctttcttttgctccaagactcaatccatcaaatatttgttc 25043499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 11390890 - 11390833
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||| |||| |||||||||||| ||||| ||||||||  ||||| |||||    
T  11390890 aatcagctccaattctcttttcttttgctccaagactcaatctttagaatatctgttc 11390833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 11407551 - 11407494
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||| |||| |||||||||||| ||||| ||||||||  ||||| |||||    
T  11407551 aatcagctccaattctcttttcttttgctccaagactcaatctttagaatatctgttc 11407494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 339
Target Start/End: Original strand, 21344799 - 21344880
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    ||||||||||| || |||   |||||||||||||||  |||||||||||||  ||||  |||||||  ||||||||||||||    
T  21344799 aatcttcatattttaggcatgaatcagctccaaatcctctttcttttgctcctagactgaatctttagaatatttgttcttg 21344880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 23798719 - 23798792
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||| ||| ||||  || ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  23798719 aatcttcgtatttttgctccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 23798792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 25144575 - 25144632
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  25144575 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 25144632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 25370682 - 25370755
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||| ||| ||||  || ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  25370682 aatcttcgtatttttgctccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 25370755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 19124513 - 19124561
Alignment:
Q  103 aaataaattaaacagacagcttgtccgagaagcaaaagcaacaaaagga 151  Q
    ||||||| |||| || |||||||||  ||||||||||||||||||||||    
T  19124513 aaataaactaaataggcagcttgtcgaagaagcaaaagcaacaaaagga 19124561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 20635417 - 20635365
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  20635417 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 20635365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 33181448 - 33181396
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  33181448 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 33181396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 245 - 336
Target Start/End: Complemental strand, 24164787 - 24164696
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||  |||||||||| ||||||   ||||| |||||||||||||||||||||||| ||||| |||||||||| ||||||||||    
T  24164787 tatttttgcacaagatcttcatatttttggcttcaatcatctccaaatctcctttcttttgctccaagactcaatctttcatatatttgttc 24164696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 16676871 - 16676794
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| |||||| |||||||||| |||||| | |||||||||||| ||||| |||||||||||||||||||||    
T  16676871 atcttcatatttttggcacaaatcagcttcaaatcccttttcttttgctccaagactcaatctttcaaatatttgttc 16676794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 25486057 - 25486110
Alignment:
Q  283 agctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||| ||||||||||||||||||||||| | |||||||||||||||||||    
T  25486057 agctccaattctcctttcttttgctcaaagactccatctttcaaatatttgttc 25486110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 20967498 - 20967427
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  20967498 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 20967427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 23029935 - 23030025
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||   | |||||||| ||| |||  |||||||| ||||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  23029935 tatttttgcaccggaccttcatattttttgccacaatcagctacaaatctcctttcttttgctccaagactcaatctttc-aatatttgttc 23030025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 2953839 - 2953916
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| |||||| | |||||||||||| |||||||||||||| || |||||  |||||||  |||||||||||    
T  2953839 atcttcatatttttggcacgaatcagctccaattctcctttcttttgttccaagactaaatcttttgaatatttgttc 2953916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 15059169 - 15059112
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  15059169 aatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 15059112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 23343897 - 23343953
Alignment:
Q  280 atcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  23343897 atcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 23343953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 336
Target Start/End: Complemental strand, 22170572 - 22170481
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||  ||||||| ||| ||  | || ||||| |||||||||||||||||||||||| ||||| |||| |||  |||||||||||    
T  22170572 tatttttgcaccaaatcttcgtattttctgtccgaatcaactccaaatctcctttcttttgctccaagactcaatatttagaatatttgttc 22170481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 336
Target Start/End: Original strand, 18484010 - 18484087
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||| ||||  |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  18484010 aatcttcatatttttgctccaaatcagctccaaa-cccctttcttttgctccaagacccaatccatcaaatattcgttc 18484087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 21734902 - 21734962
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||| |||||| |||||||||||||||| ||||| |||||  ||||||||| ||||    
T  21734902 ccaaatcagttccaaaactcctttcttttgctccaagactcaatccatcaaatattcgttc 21734962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 23583253 - 23583313
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  23583253 ccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 23583313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 23600450 - 23600510
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  23600450 ccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 23600510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 21575463 - 21575413
Alignment:
Q  111 taaacagacagcttgtccgagaagcaaaagcaacaaaaggagtgctgtggt 161  Q
    |||| |||||||||||| |||||||||||||| ||||| ||||| ||||||    
T  21575463 taaatagacagcttgtcggagaagcaaaagcagcaaaatgagtgttgtggt 21575413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 339
Target Start/End: Complemental strand, 31414397 - 31414336
Alignment:
Q  278 aaatcagctccaaatctcctttcttttgctcaaagacgcaatcttt-caaatatttgttcttg 339  Q
    ||||||||| |||||||| |||||||||||| ||||| ||||||||  |||||||||||||||    
T  31414397 aaatcagcttcaaatctc-tttcttttgctccaagactcaatctttagaaatatttgttcttg 31414336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 20104279 - 20104352
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatattt 332  Q
    |||||||||| ||||||   ||| ||||  || ||||||||||||||||| ||||| | |||||||||||||||    
T  20104279 atcttcatatttttggcatcaataagctataattctcctttcttttgctccaagactccatctttcaaatattt 20104352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 24143541 - 24143598
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||  ||||||||||||| |||||  |||||||  |||||||||||    
T  24143541 aatcagctccaaatcctctttcttttgctccaagactgaatctttagaatatttgttc 24143598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 28835228 - 28835284
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||| ||||||||| |||||||||||||||||||| |||||  ||||||||| ||||    
T  28835228 aatcaactccaaatc-cctttcttttgctcaaagactcaatcaatcaaatattcgttc 28835284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 20725178 - 20725226
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaa 327  Q
    |||||||||||||||  ||||||||||||| ||||| |||||| |||||    
T  20725178 aatcagctccaaatcctctttcttttgctccaagactcaatctatcaaa 20725226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 20799504 - 20799444
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| | ||||| |||||||| ||||| |||||  ||||||||| ||||    
T  20799504 ccaaatcagctccaaaacccctttgttttgctccaagactcaatccatcaaatattcgttc 20799444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 22730 - 22787
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  22730 aatcagctccaaatctcctttcttttgctcaaagactccatctttcaaatatttgttc 22787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 335
Target Start/End: Complemental strand, 13943 - 13853
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgtt 335  Q
    |||||||||||  ||||||| | | ||| ||| ||||||||||||||||||||||||||||||| ||||   |||||||||||||||||||    
T  13943 tatttttgcaccaaatcttcgtgtttttagccaaaatcagctccaaatctcctttcttttgctccaagaataaatctttcaaatatttgtt 13853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 331
Target Start/End: Complemental strand, 2291 - 2236
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||| |||||||||    
T  2291 ccaaatcagctccaaaacccctttcttttgctccaagactcaatctatcaaatatt 2236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 245 - 333
Target Start/End: Complemental strand, 21447 - 21360
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttg 333  Q
    |||||||| | || |||||||||| |||||| ||||||| |||||| ||||||||||||||||| ||||| |||||||| |||||||||    
T  21447 tatttttgtatatgatcttcatatttttggcacaaatcaactccaa-tctcctttcttttgctccaagactcaatcttttaaatatttg 21360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 26725 - 26654
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | ||||| |||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  26725 atatttttggcacgaatcaactccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 26654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 10148 - 10219
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||    
T  10148 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttaaaatatttgttc 10219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 60 - 134
Alignment:
Q  262 ttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  60 ttcatatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 48543 - 48469
Alignment:
Q  262 ttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  48543 ttcatatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 48469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 274 - 336
Target Start/End: Complemental strand, 520506 - 520444
Alignment:
Q  274 gcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| ||||||| |||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  520506 gcccgaatcagccccaaatctcctttcttttgctccaagactcaatctttaaaatatttgttc 520444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 49655 - 49715
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  49655 ccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 49715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Original strand, 425337 - 425389
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  425337 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 425389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 6975 - 7052
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| ||| || | ||| |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||    
T  6975 atcttcatattttttgcacgaattagctccaattctcctttcttttgctctaagactccatctttcaaatatttgttc 7052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 339
Target Start/End: Complemental strand, 20112 - 20032
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    ||||||||||||||||  |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| |||||||    
T  20112 aatcttcatatatttgctccaaatcagctccaaa-cccctttcttttgctccaagactcaatccatcaaatattcgttcttg 20032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 325
Target Start/End: Complemental strand, 167906 - 167826
Alignment:
Q  245 tatttttgcacataatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttca 325  Q
    ||||||||||||  |||||||||| |||||||  |||||||||||||||   |||||||||||| ||||| ||||||||||    
T  167906 tatttttgcacaagatcttcatatttttggcctcaatcagctccaaatcctatttcttttgctccaagactcaatctttca 167826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 3240 - 3169
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  3240 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 3169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 6190 - 6120
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgtt 335  Q
    |||| |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  ||||||||||    
T  6190 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgtt 6120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 10804 - 10734
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgtt 335  Q
    |||| |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  ||||||||||    
T  10804 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgtt 10734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 8799 - 8729
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgtt 335  Q
    |||| |||||| | |||||||||||| ||||||||||||||||| ||||| ||||||||  ||||||||||    
T  8799 atatttttggcacgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgtt 8729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 265 - 339
Target Start/End: Complemental strand, 100119 - 100045
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    |||| |||||| | ||| |||||||| ||||||||||||||||| ||||| ||||||||  ||||||||||||||    
T  100119 atatttttggcacgaataagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcttg 100045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 23014 - 22943
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||| ||| ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  23014 atatttttggcacgaatcagctgcaattctcctttcttttgctccaagactcaatctttagaatatttgttc 22943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 102201 - 102145
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||||||| |||||||||||| ||||| |||||  ||||||||| ||||    
T  102201 aatcagctccaaatctc-tttcttttgctccaagactcaatccatcaaatattcgttc 102145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 77601 - 77541
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    |||||||||| ||||  ||||||||||||| ||||| |||||| ||||| ||| |||||||    
T  77601 aatcagctcctaatcctctttcttttgctccaagactcaatctatcaaacattcgttcttg 77541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 44606 - 44659
Alignment:
Q  283 agctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||    
T  44606 agctccaattctcctttcttttgctccaagactccatctttcaaatatttgttc 44659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 38313 - 38384
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||| |||||| | |||||||||||| |||||||||||||||| ||| || ||||||||  |||||||||||    
T  38313 atatttttggcacgaatcagctccaattctcctttcttttgctaaaaaactcaatctttagaatatttgttc 38384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 61739 - 61661
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||| || |  |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  61739 aatcttcatattttcgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 61661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 339
Target Start/End: Complemental strand, 20909 - 20835
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    |||| |||||| | ||| |||||| | ||||||||||||||||| ||||| ||||||||  ||||||||||||||    
T  20909 atatttttggcacgaattagctccgattctcctttcttttgctccaagactcaatctttagaatatttgttcttg 20835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 14498 - 14571
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||| ||||  || ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  14498 aatcttcatatttttgctccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 14571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 18117 - 18190
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||| ||| ||||  |||||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  18117 aatcttcgtatttttgcaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 18190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 19889 - 19942
Alignment:
Q  283 agctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||| ||||||||||||| ||| ||||| | |||||||||||||||||||    
T  19889 agctccaattctcctttctttttctccaagactccatctttcaaatatttgttc 19942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 61585 - 61528
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||| ||||||||||||||||| ||||| |||||||   |||||||||||    
T  61585 aatcagctccaattctcctttcttttgctccaagactcaatcttcagaatatttgttc 61528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1225 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1225
Description:

Target: scaffold1225; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 2084 - 2024
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    |||||||||| ||||  ||||||||||||| ||||| ||||||||||| |||| |||||||    
T  2084 aatcagctcctaatcctctttcttttgctccaagactcaatctttcaattattcgttcttg 2024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 331
Target Start/End: Original strand, 21973 - 22025
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||||| |||||||||||||| ||||| |||||  |||||||||    
T  21973 aatcagctccaaatcccctttcttttgctccaagactcaatccatcaaatatt 22025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 27161 - 27101
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  27161 ccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 27101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 331
Target Start/End: Original strand, 61189 - 61241
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||| |||||||||    
T  61189 aatcagctccaaaacccctttcttttgctctaagactcaatctatcaaatatt 61241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 36846 - 36786
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| |||||||    
T  36846 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcttg 36786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 117554 - 117494
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||| |||||| |||||||||||||||| ||||| |||||  ||||||||| ||||    
T  117554 ccaaatcagttccaaaactcctttcttttgctccaagactcaatccatcaaatattcgttc 117494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 9218 - 9285
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatattt 332  Q
    |||| |||||| | |||||||||||| ||||||||| ||||||| ||||| ||||||||  |||||||    
T  9218 atatttttggcacgaatcagctccaattctcctttcatttgctccaagactcaatctttagaatattt 9285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 14865 - 14812
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatat 330  Q
    ||||||||| ||||||| ||||||||||||||| ||||| |||||| ||||||||    
T  14865 ccaaatcagatccaaat-tcctttcttttgctccaagactcaatctatcaaatat 14812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 2648 - 2709
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatc 320  Q
    ||||||||||| ||||  || ||||||||||||||| |||||||||||||| ||||| |||||    
T  2648 aatcttcatatttttgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatc 2709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 284 - 345
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatc 320  Q
    ||||||||||| |||   |||||||||||||||||| |||||||||||||| ||||| |||||    
T  284 aatcttcatatttttataccaaatcagctccaaatc-cctttcttttgctccaagactcaatc 345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 335
Target Start/End: Original strand, 19283 - 19353
Alignment:
Q  265 atatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgtt 335  Q
    |||| |||||| | |||||||||||| |||| |||| ||||||| ||||| ||||||||  ||||||||||    
T  19283 atatttttggcacgaatcagctccaattctcttttcatttgctccaagactcaatcttttgaatatttgtt 19353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 17463 - 17385
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| ||| ||||  || ||||||||||||| |||||||||||| ||| ||||| |||||  ||||||||| ||||    
T  17463 aatcttcgtatttttgctccgaatcagctccaaaactcctttctttttctccaagactcaatccatcaaatattcgttc 17385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 27415 - 27337
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| ||| ||||  || ||||||||||||| |||||||||||| ||| ||||| |||||  ||||||||| ||||    
T  27415 aatcttcgtatttttgctccgaatcagctccaaaactcctttctttttctccaagactcaatccatcaaatattcgttc 27337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 336
Target Start/End: Original strand, 164201 - 164278
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| ||| ||||  |||||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  164201 aatcttcgtatttttgctccaaatcagctccaaacc-cctttcttttgctccaagactcaatccatcaaatattcgttc 164278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 339
Target Start/End: Complemental strand, 172494 - 172429
Alignment:
Q  274 gcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttcttg 339  Q
    |||| |||||||||||||||  |||||| |||||| ||||| ||||||||  ||||| ||||||||    
T  172494 gcccgaatcagctccaaatcctctttctgttgctccaagactcaatctttagaatatatgttcttg 172429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 336
Target Start/End: Original strand, 151166 - 151244
Alignment:
Q  258 aatcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||| ||| ||||  || ||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  151166 aatcttcgtatttttgctccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 151244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 2397 - 2454
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  2397 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 2454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 6992 - 6915
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||| ||||||   |||||||||||| || |||||||||||||| |||||  |||||||  |||||| ||||    
T  6992 atcttcatatttttggcatgaatcagctccaattcccctttcttttgctccaagactaaatcttttgaatattcgttc 6915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 32581 - 32637
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||||| |||||||||||||| ||||| |||||  ||||||||| ||||    
T  32581 aatcagctccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttc 32637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 49626 - 49553
Alignment:
Q  259 atcttcatatatttggcccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatattt 332  Q
    |||||||||| ||||||   ||| |||||||| |||  |||||||||||| ||||| | |||||||||||||||    
T  49626 atcttcatatttttggcatgaataagctccaattcttatttcttttgctccaagactccatctttcaaatattt 49553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 101759 - 101699
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||| |||||| | |||||||||||||| ||||| |||||  ||||||||| ||||    
T  101759 ccaaatcagttccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 101699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 300450 - 300506
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||||| |||||||||||||| ||||| |||||  ||||||||| ||||    
T  300450 aatcagctccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttc 300506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1354 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1354
Description:

Target: scaffold1354; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Original strand, 702 - 754
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  702 aatcagctccaaaacccctttcttttgctcgaagactcaatccatcaaatatt 754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 2252 - 2312
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| | ||||| |||||||| ||||| |||||  ||||||||| ||||    
T  2252 ccaaatcagctccaaaacccctttattttgctccaagactcaatccatcaaatattcgttc 2312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 1152 - 1100
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  1152 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 1100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Original strand, 2123 - 2175
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  2123 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 2175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Original strand, 1963 - 2015
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  1963 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 2015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 12606 - 12547
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||| |||||||| |||||||||||||| ||||| |||||  ||||||||| ||||    
T  12606 ccaaatcagatccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttc 12547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 4771 - 4711
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| | |||||||||||||| || || |||||  ||||||||| ||||    
T  4771 ccaaatcagctccaaaacccctttcttttgctccaatactcaatccatcaaatattcgttc 4711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 6439 - 6379
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    |||||||||||||||| | |||||||||||||  ||||| |||||  ||||||||| ||||    
T  6439 ccaaatcagctccaaaacccctttcttttgcttcaagactcaatccatcaaatattcgttc 6379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 19856 - 19804
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  19856 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 19804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 4299 - 4247
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  4299 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 4247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Original strand, 37562 - 37614
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  37562 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 37614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 34260 - 34312
Alignment:
Q  283 agctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgtt 335  Q
    ||||||||| | |||||||||||||| ||||| |||||  |||||||||||||    
T  34260 agctccaaaacccctttcttttgctccaagactcaatccatcaaatatttgtt 34312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Original strand, 22076 - 22128
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  22076 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 22128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 107413 - 107361
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  107413 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 107361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 189996 - 189944
Alignment:
Q  279 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatt 331  Q
    ||||||||||||| | |||||||||||||| ||||| |||||  |||||||||    
T  189996 aatcagctccaaaacccctttcttttgctctaagactcaatccatcaaatatt 189944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 28847 - 28803
Alignment:
Q  292 tctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 336  Q
    ||||||||||||||||| ||||| ||||||||  |||||||||||    
T  28847 tctcctttcttttgctccaagactcaatctttagaatatttgttc 28803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 320
Target Start/End: Original strand, 356369 - 356413
Alignment:
Q  276 ccaaatcagctccaaatctcctttcttttgctcaaagacgcaatc 320  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||    
T  356369 ccaaatcagctccaaaacccctttcttttgctccaagactcaatc 356413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University