View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13052_high_18 (Length: 282)
Name: NF13052_high_18
Description: NF13052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13052_high_18 |
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Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 9 - 258
Target Start/End: Original strand, 46574130 - 46574379
Alignment:
| Q |
9 |
gattattctttaatgtttggaatagaaaggaacaaagacacgaatcttgtatgaatcacaaattatcctgcgtttgtagctcagttggtgaactatgaat |
108 |
Q |
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| T |
46574130 |
gattattctttaatgtttggaatagaaaggaacaaagacacgaatcttgtatgaatcacaaattatcctgcgtttgtagctcagttggcgaactatgaac |
46574229 |
T |
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| Q |
109 |
gttaaaggagagttaaaatggagattatgggttagattttcaaaattcaacattttatttttctctctaacaatttaccaacgaccaacatttgtttgct |
208 |
Q |
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| T |
46574230 |
attaaaggagagttaaaatggagattatgggttagattttcgaaattcaacattttatttttctctctaacaatttaccaacgactaacatttgtttgct |
46574329 |
T |
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| Q |
209 |
tagactaaaatttggagtcaattacaacaaacataagataccaagatgta |
258 |
Q |
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| T |
46574330 |
aagactaaaatttggagtcaattacaacaaacgtaagataccaacatgta |
46574379 |
T |
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