View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13052_low_22 (Length: 265)
Name: NF13052_low_22
Description: NF13052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13052_low_22 |
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Alignment Details
Target: chr5 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 36809200 - 36809431
Alignment:
| Q |
14 |
atatgtaacttaaattgagtaccttttacatttattctttttgaaggattcaataccttttaagccttttttcaatnnnnnnnnntaccttttaaacttt |
113 |
Q |
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| T |
36809200 |
atatgtaacttaaattgagtaccttttacatttattctttttgaaggattcaataccttttaagccttttttcaataaaaaaaa-taccttttaaacttt |
36809298 |
T |
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| Q |
114 |
ggaaaaagctatttgatctacacagagccaccacacacaaccatcaaaactcaatattcaaagactagccgctcaatatactagtgaatatggagaaaat |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36809299 |
ggaaaaagctatttgatctacacagagccaccacacacaaccatcaaaactcaatattcaaagactagccgctcaatatactagtgaatatggagaaaat |
36809398 |
T |
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| Q |
214 |
atacaattatttatttcccataataataaaagg |
246 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
36809399 |
atacaattatttatttcccataataataaaagg |
36809431 |
T |
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