View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13052_low_3 (Length: 590)

Name: NF13052_low_3
Description: NF13052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13052_low_3
NF13052_low_3
[»] chr2 (32 HSPs)
chr2 (122-569)||(41299197-41299660)
chr2 (7-123)||(5723137-5723253)
chr2 (16-123)||(36987965-36988073)
chr2 (16-123)||(36205555-36205662)
chr2 (16-123)||(45099925-45100032)
chr2 (16-123)||(4503023-4503130)
chr2 (17-123)||(6594895-6595003)
chr2 (16-123)||(17057259-17057367)
chr2 (16-123)||(17085242-17085350)
chr2 (20-123)||(38312410-38312514)
chr2 (16-123)||(30833517-30833626)
chr2 (30-123)||(723650-723742)
chr2 (16-99)||(4484218-4484301)
chr2 (30-123)||(14202327-14202419)
chr2 (16-99)||(32289763-32289846)
chr2 (30-123)||(34139676-34139768)
chr2 (30-123)||(42362518-42362610)
chr2 (30-123)||(14633731-14633823)
chr2 (30-123)||(29868039-29868133)
chr2 (30-123)||(2334321-2334415)
chr2 (30-123)||(11067475-11067565)
chr2 (24-121)||(1345639-1345733)
chr2 (30-123)||(33162358-33162448)
chr2 (30-120)||(39285012-39285099)
chr2 (23-98)||(2838141-2838217)
chr2 (30-92)||(24885787-24885850)
chr2 (30-123)||(11151499-11151589)
chr2 (30-123)||(36317917-36318007)
chr2 (30-123)||(36773732-36773822)
chr2 (30-92)||(11690699-11690762)
chr2 (36-118)||(11049729-11049808)
chr2 (23-117)||(13121942-13122031)
[»] chr6 (17 HSPs)
chr6 (7-123)||(5408951-5409067)
chr6 (7-123)||(5413276-5413392)
chr6 (7-123)||(31404556-31404672)
chr6 (35-123)||(5406109-5406197)
chr6 (35-123)||(5410434-5410522)
chr6 (16-123)||(16452218-16452326)
chr6 (16-123)||(9182921-9183029)
chr6 (16-123)||(30834424-30834533)
chr6 (30-123)||(33160254-33160349)
chr6 (35-123)||(16569192-16569279)
chr6 (16-121)||(2171417-2171526)
chr6 (23-123)||(33211086-33211183)
chr6 (16-121)||(3072647-3072753)
chr6 (30-103)||(14521585-14521659)
chr6 (25-92)||(28137309-28137377)
chr6 (30-123)||(3038831-3038921)
chr6 (23-86)||(26954187-26954251)
[»] chr8 (32 HSPs)
chr8 (7-123)||(34254212-34254328)
chr8 (7-123)||(34256388-34256504)
chr8 (7-123)||(44304026-44304142)
chr8 (16-123)||(17982824-17982931)
chr8 (16-123)||(19945249-19945356)
chr8 (10-123)||(4731828-4731942)
chr8 (16-121)||(1746109-1746214)
chr8 (16-123)||(30143510-30143618)
chr8 (16-123)||(42498365-42498473)
chr8 (16-123)||(31218428-31218535)
chr8 (10-123)||(15212956-15213070)
chr8 (16-123)||(33352320-33352428)
chr8 (16-123)||(27811448-27811556)
chr8 (16-123)||(4733876-4733984)
chr8 (30-123)||(4743122-4743212)
chr8 (30-123)||(43036593-43036687)
chr8 (20-121)||(2627910-2628012)
chr8 (23-121)||(1292365-1292460)
chr8 (23-123)||(41366514-41366613)
chr8 (30-123)||(40321250-40321340)
chr8 (34-123)||(12702541-12702632)
chr8 (23-105)||(18105972-18106053)
chr8 (30-92)||(6599170-6599233)
chr8 (30-92)||(6674623-6674686)
chr8 (30-125)||(18141986-18142078)
chr8 (23-121)||(19491599-19491694)
chr8 (33-123)||(1345282-1345369)
chr8 (34-123)||(3303578-3303668)
chr8 (33-123)||(30291778-30291865)
chr8 (23-67)||(4162692-4162736)
chr8 (30-123)||(5689441-5689531)
chr8 (30-91)||(10015277-10015339)
[»] chr7 (36 HSPs)
chr7 (17-123)||(29991224-29991330)
chr7 (16-123)||(4178944-4179051)
chr7 (10-123)||(27347987-27348101)
chr7 (16-123)||(23555211-23555319)
chr7 (10-121)||(35854088-35854200)
chr7 (16-123)||(48489601-48489709)
chr7 (16-120)||(43864417-43864522)
chr7 (16-123)||(25616024-25616133)
chr7 (16-121)||(48408978-48409085)
chr7 (16-123)||(39731540-39731649)
chr7 (30-123)||(47676040-47676134)
chr7 (16-123)||(4586331-4586439)
chr7 (16-123)||(18126814-18126924)
chr7 (16-121)||(26417488-26417594)
chr7 (35-123)||(41648922-41649009)
chr7 (30-123)||(47673848-47673942)
chr7 (16-123)||(31732859-31732967)
chr7 (16-121)||(25766847-25766954)
chr7 (30-123)||(14069737-14069831)
chr7 (30-123)||(14379765-14379859)
chr7 (30-123)||(19502349-19502443)
chr7 (31-123)||(38671129-38671220)
chr7 (16-121)||(43504044-43504148)
chr7 (16-104)||(48491765-48491854)
chr7 (30-123)||(36146316-36146406)
chr7 (30-123)||(41317342-41317432)
chr7 (23-123)||(1113827-1113924)
chr7 (10-123)||(495872-495981)
chr7 (23-121)||(23564962-23565058)
chr7 (30-123)||(24525410-24525500)
chr7 (30-123)||(8153512-8153602)
chr7 (23-86)||(31105293-31105357)
chr7 (30-70)||(31519115-31519155)
chr7 (44-123)||(12097789-12097865)
chr7 (30-83)||(30024660-30024714)
chr7 (72-121)||(2759144-2759193)
[»] chr5 (25 HSPs)
chr5 (7-123)||(25412931-25413047)
chr5 (16-123)||(13343231-13343338)
chr5 (15-123)||(30182759-30182867)
chr5 (16-123)||(36073933-36074040)
chr5 (16-123)||(30682813-30682921)
chr5 (23-122)||(13239923-13240023)
chr5 (16-123)||(16409648-16409757)
chr5 (16-123)||(26178055-26178164)
chr5 (10-123)||(39468433-39468547)
chr5 (21-123)||(42426130-42426233)
chr5 (30-123)||(19806533-19806627)
chr5 (30-123)||(28750559-28750653)
chr5 (30-123)||(37439312-37439406)
chr5 (30-123)||(26170935-26171030)
chr5 (30-121)||(8565854-8565943)
chr5 (21-123)||(32636994-32637097)
chr5 (30-123)||(42428334-42428428)
chr5 (30-92)||(16649738-16649801)
chr5 (35-123)||(33831850-33831938)
chr5 (30-123)||(5887338-5887432)
chr5 (30-123)||(538195-538285)
chr5 (30-123)||(31183141-31183238)
chr5 (23-87)||(42927099-42927164)
chr5 (30-123)||(13488373-13488465)
chr5 (23-86)||(16452286-16452350)
[»] chr3 (36 HSPs)
chr3 (7-123)||(37408629-37408746)
chr3 (16-123)||(5258034-5258141)
chr3 (16-123)||(5260213-5260320)
chr3 (17-117)||(7762442-7762543)
chr3 (16-123)||(7764635-7764743)
chr3 (16-123)||(19683778-19683886)
chr3 (16-121)||(9636014-9636120)
chr3 (16-123)||(5236347-5236455)
chr3 (16-123)||(51398984-51399092)
chr3 (16-122)||(9634711-9634818)
chr3 (16-123)||(29811038-29811146)
chr3 (7-123)||(45095334-45095450)
chr3 (7-123)||(9581453-9581570)
chr3 (35-123)||(761017-761104)
chr3 (10-123)||(40735553-40735666)
chr3 (10-123)||(29813233-29813345)
chr3 (17-123)||(40734668-40734774)
chr3 (23-92)||(22834903-22834973)
chr3 (23-121)||(21350904-21350999)
chr3 (30-123)||(9666374-9666464)
chr3 (30-123)||(29196294-29196384)
chr3 (16-99)||(23200027-23200109)
chr3 (16-123)||(23197828-23197936)
chr3 (35-123)||(29682529-29682616)
chr3 (30-123)||(23391816-23391907)
chr3 (30-123)||(31314615-31314705)
chr3 (30-121)||(32891276-32891364)
chr3 (16-121)||(7779891-7779998)
chr3 (30-123)||(16499199-16499288)
chr3 (30-123)||(44700387-44700477)
chr3 (30-92)||(39153268-39153331)
chr3 (30-123)||(32744351-32744434)
chr3 (16-55)||(6716742-6716781)
chr3 (23-117)||(51352036-51352125)
chr3 (16-55)||(801328-801368)
chr3 (41-118)||(53921422-53921496)
[»] chr4 (31 HSPs)
chr4 (10-123)||(34570298-34570412)
chr4 (17-122)||(52095253-52095359)
chr4 (16-123)||(52082553-52082661)
chr4 (16-123)||(56178526-56178634)
chr4 (16-123)||(5369972-5370080)
chr4 (35-121)||(29999719-29999805)
chr4 (16-123)||(48143214-48143326)
chr4 (16-123)||(13992181-13992290)
chr4 (16-118)||(37740800-37740903)
chr4 (10-123)||(5429849-5429963)
chr4 (30-123)||(12739454-12739548)
chr4 (16-123)||(9927349-9927456)
chr4 (10-123)||(47038300-47038409)
chr4 (30-123)||(12743829-12743923)
chr4 (30-123)||(26175540-26175634)
chr4 (16-122)||(54199798-54199904)
chr4 (30-123)||(29254664-29254758)
chr4 (16-93)||(31495196-31495272)
chr4 (30-123)||(5871990-5872082)
chr4 (16-123)||(52467248-52467352)
chr4 (30-123)||(46147299-46147389)
chr4 (23-123)||(48893539-48893636)
chr4 (30-122)||(36994694-36994783)
chr4 (23-121)||(31474323-31474418)
chr4 (23-121)||(6542080-6542175)
chr4 (77-123)||(12745266-12745312)
chr4 (23-120)||(4588132-4588226)
chr4 (30-123)||(45687091-45687180)
chr4 (38-121)||(29056531-29056610)
chr4 (30-105)||(36463299-36463373)
chr4 (45-122)||(48142300-48142373)
[»] chr1 (34 HSPs)
chr1 (16-123)||(3157035-3157143)
chr1 (16-123)||(13316242-13316349)
chr1 (16-123)||(49918520-49918628)
chr1 (33-123)||(3189501-3189592)
chr1 (33-123)||(3198318-3198409)
chr1 (33-123)||(3207157-3207248)
chr1 (16-123)||(37503447-37503555)
chr1 (10-123)||(44455330-44455444)
chr1 (16-123)||(51765568-51765677)
chr1 (16-123)||(20762843-20762946)
chr1 (16-123)||(31659408-31659516)
chr1 (23-123)||(834066-834165)
chr1 (30-123)||(28220130-28220224)
chr1 (16-123)||(37559755-37559865)
chr1 (30-123)||(3847027-3847119)
chr1 (16-123)||(8550674-8550784)
chr1 (30-123)||(28223325-28223419)
chr1 (30-123)||(196813-196905)
chr1 (16-123)||(10925396-10925500)
chr1 (30-123)||(30476350-30476444)
chr1 (30-123)||(50167083-50167173)
chr1 (30-123)||(40122104-40122194)
chr1 (30-123)||(50169118-50169208)
chr1 (30-123)||(1833683-1833773)
chr1 (30-123)||(13137884-13137974)
chr1 (23-121)||(41361087-41361182)
chr1 (23-121)||(23555167-23555262)
chr1 (30-123)||(13659245-13659334)
chr1 (30-123)||(28265462-28265552)
chr1 (30-123)||(45644262-45644352)
chr1 (30-92)||(4552552-4552615)
chr1 (23-121)||(15820479-15820574)
chr1 (27-92)||(8870628-8870694)
chr1 (72-123)||(46065088-46065135)
[»] scaffold0002 (1 HSPs)
scaffold0002 (16-122)||(434705-434812)
[»] scaffold1519 (1 HSPs)
scaffold1519 (16-123)||(1086-1194)
[»] scaffold0016 (1 HSPs)
scaffold0016 (16-123)||(114773-114881)
[»] scaffold0066 (1 HSPs)
scaffold0066 (16-122)||(20305-20412)
[»] scaffold0491 (2 HSPs)
scaffold0491 (16-123)||(8623-8732)
scaffold0491 (16-123)||(11049-11158)
[»] scaffold1668 (1 HSPs)
scaffold1668 (30-123)||(1406-1496)
[»] scaffold0006 (1 HSPs)
scaffold0006 (30-123)||(149006-149095)


Alignment Details
Target: chr2 (Bit Score: 331; Significance: 0; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 122 - 569
Target Start/End: Original strand, 41299197 - 41299660
Alignment:
Q  122 agtgagcctttgtttctagtgtttatttgacaagtaatatcttcaaggctaccttctctcattctatgcaagaatttcagattttggatgtcttttttgg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  41299197 agtgagcctttgtttctagtgtttatttgacaagtaatatcttcaaggctaccttctctcattctatgcaagaatttcagattttggatgtctttttcgg 41299296  T
Q  222 ttaacattcattctccaaaggctctcaacatcaaacaagttcattggcattctcctataatttcttggacaaaatgcaatatt-----ggcagctagagg 316  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||    
T  41299297 ttaacattcattctccaaaggctctcaacatcaaacaggttcattggcattctcctataatttcttggacaaaatgcaatattgacaaggcagctagagg 41299396  T
Q  317 tttttctcgtccttctgcttgcgagggtatcattagggatcaccatgcaaa----------tcttttcctgtcaacattggtaataatacttcctttaat 406  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||          | |||||||||||||||||||||||||||||||||||||    
T  41299397 tttttctggtccttctgcttgcgagggtatcattagggatcaccatgcaaatgtttatggttgttttcctgtcaacattggtaataatacttcctttaat 41299496  T
Q  407 gttgagttaattggatctatgac-ggccattgaaactgctttcnnnnnnngttgatcactctctggttggataccgactctcaattgacaactttagctt 505  Q
    ||||||||||||||||||||||| |||||||||||||||||||       |||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  41299497 gttgagttaattggatctatgacgggccattgaaactgctttcaaaaaaagttgatcactctctggttggatactgactctcaattgacaacattagctt 41299596  T
Q  506 tcaannnnnnngatattgttccatatcaccttagaatttaaaaacaaatggttaatttgcatag 569  Q
    ||||       ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41299597 tcaatttttttgatattgttccttatcaccttagaatttaaaaacaaatggttaatttgcatag 41299660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 5723137 - 5723253
Alignment:
Q  7 gagcacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagag 106  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||| ||||    
T  5723137 gagcacaaacaataatcaacaataacaacacctagatctaatctaggaatcaaaaagaaaagcacaaaccacaagcaaaagataaaaggagagaatagag 5723236  T
Q  107 aaacaaacacaccaaag 123  Q
    |||||||||||||||||    
T  5723237 aaacaaacacaccaaag 5723253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 36987965 - 36988073
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  36987965 caataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaagccacaagcaaaagataaaaggagagaagagagaaacaaac 36988064  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  36988065 acaccaaag 36988073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 36205555 - 36205662
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaaca 115  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  36205555 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcagaaaccacaagcaaaatataaaaggagagaagagagaaacaaaca 36205654  T
Q  116 caccaaag 123  Q
    ||||||||    
T  36205655 caccaaag 36205662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 45100032 - 45099925
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaaca 115  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| |||||||| ||| ||||||||||| |||||| |||||||||||||||||||||    
T  45100032 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaatcacaagcaaaatataaaaggagagaagagagaaacaaaca 45099933  T
Q  116 caccaaag 123  Q
    ||||||||    
T  45099932 caccaaag 45099925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 4503023 - 4503130
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaaca 115  Q
    ||||||||||||| |||| ||||||||||||||||||||| ||||| |||||||| ||| |||||||| ||||||||| |||||||||||||||||||||    
T  4503023 caataatcaacaataacagcacctagatctaatctaggaaacaaagtgaaaagcacaaaacacaagcacaagataaaaggagagaagagagaaacaaaca 4503122  T
Q  116 caccaaag 123  Q
    ||||||||    
T  4503123 caccaaag 4503130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 6594895 - 6595003
Alignment:
Q  17 aataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaa-tgagagaagagagaaacaaac 114  Q
    |||||||||||| |||| |||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||||||  ||||||||||||||||||||    
T  6594895 aataatcaacaataacagcacctagatctaatctagaaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaagggagagaagagagaaacaaac 6594994  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  6594995 acaccaaag 6595003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 17057259 - 17057367
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| |||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||  |||||| ||||| |||||||    
T  17057259 caataatcaacaataacagcacctagatctaatctaggaattaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagacgagaggaacaaac 17057358  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  17057359 acaccaaag 17057367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 17085242 - 17085350
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| |||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||  |||||| ||||| |||||||    
T  17085242 caataatcaacaataacagcacctagatctaatctaggaattaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagacgagaggaacaaac 17085341  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  17085342 acaccaaag 17085350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 38312514 - 38312410
Alignment:
Q  20 aatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaacacac 118  Q
    ||||||||| |||| ||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||  |||||||||||| ||||||||||     
T  38312514 aatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacat 38312415  T
Q  119 caaag 123  Q
    |||||    
T  38312414 caaag 38312410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 30833626 - 30833517
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgaga--gaagagagaaacaaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| ||||  ||||||  |||||||    
T  30833626 caataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaaccacaagcacaagataaaaggagagggaagaggaaaacaaa 30833527  T
Q  114 cacaccaaag 123  Q
     |||||||||    
T  30833526 gacaccaaag 30833517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 723650 - 723742
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| |||||||   |||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  723650 aacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagaagagagaaacaaacacaccaaag 723742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 4484218 - 4484301
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagag 99  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| |||||    
T  4484218 caataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcaaaaaccacaagcacaagataaaaggagag 4484301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 14202327 - 14202419
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcat-aaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| ||||||| | |||||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  14202327 aacaacacctagatctaatctagtaatcaaagtgaaaagcttaaaaccacaagcaaaagataaa--gagagaagagataaacaaacacaccaaag 14202419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 32289846 - 32289763
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagag 99  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| |||||||| ||||||||| |||||    
T  32289846 caataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcataaaacacaagcacaagataaaaggagag 32289763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 34139676 - 34139768
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||| ||||||||||||||||| |||||||| |||||||  ||| ||||||||||||||||||  |||||||||||||||||||||||||||||    
T  34139676 aacaagacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagaagagagaaacaaacacaccaaag 34139768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 42362610 - 42362518
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| ||||| |   |||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  42362610 aacaacacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcaaaagataaa--gagagaagagagaaacaaacacaccaaag 42362518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 14633731 - 14633823
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| |||||||   ||||||||| |||||||||||  ||||||| |||||||||||||||||||||    
T  14633731 aacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaatcaaaagataaa--gagagaatagagaaacaaacacaccaaag 14633823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 29868133 - 29868039
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| ||||| |  ||| ||||||||| ||||||||  ||||||||||||||||||||||| |||||    
T  29868133 aacaacacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcacaagataaacggagagaagagagaaacaaacacatcaaag 29868039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 2334321 - 2334415
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaag--cataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||| | |||||||| |||||   || |||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  2334321 aacaacacctagatctaatctggtaatcaaagtgaaaacttca-aaaccacaagcacaagataaagggagagaagagagaaacaaacacaccaaag 2334415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 11067565 - 11067475
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| |||||||   |||||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  11067565 aacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagaga--agagaaacaaacacaccaaag 11067475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 1345733 - 1345639
Alignment:
Q  24 aacaaaaacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||   ||||||||| || |||||||| |||||    |||||||||||||||||||    
T  1345733 aacaataacaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaatcataagataaagtgaga----agagaaacaaacacaccaa 1345639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 33162358 - 33162448
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| |||||||   |||||||||||||||||||||  ||||    |||||||||||||||||||||    
T  33162358 aacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaatagaga----agagaaacaaacacaccaaag 33162448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 39285099 - 39285012
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacacca 120  Q
    ||||||||||||||||||||||| |||||||| |||||||   |||||||||||||||||||||  ||||||  ||||||||||||||||||    
T  39285099 aacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagaga--agagaaacaaacacacca 39285012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 2838217 - 2838141
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgaga 98  Q
    |||||| |||||||||||||| ||||||||||||||||| |||||||   ||||||||||||||||||||| |||||    
T  2838217 caacaataacaacacctagatataatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagtgaga 2838141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 24885850 - 24885787
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaa 92  Q
    ||||||||||||||||||||||| |||||||| ||||||||  |||||||||||||||||||||    
T  24885850 aacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaa 24885787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 11151499 - 11151589
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||| ||||||||||||||| |||||||| |||||||   ||||||||| |||||||||||  ||||||  |||||||||||||||||||||    
T  11151499 aacaacagctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaaacaaaagataaa--gagaga--agagaaacaaacacaccaaag 11151589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 36317917 - 36318007
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||||||||||||| |||||||| |||||||| ||||||||  |||||||||||||||||||||  || |||  ||| |||||||||||||||||    
T  36317917 aacaacacctagatttaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaa--gaaaga--agataaacaaacacaccaaag 36318007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 36773822 - 36773732
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| ||| ||| ||||||||   |||||||||||||||||||||  || |||  |||||||||||||||||||||    
T  36773822 aacaacacctagatctaatctagtaataaaaaagaaaagctcaaaaccacaagcaaaagataaa--gaaaga--agagaaacaaacacaccaaag 36773732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 11690762 - 11690699
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaa 92  Q
    ||||||||||||||||||||||||||| |||| |||||||   |||||||||||||||||||||    
T  11690762 aacaacacctagatctaatctaggaattaaagtgaaaagctcaaaaccacaagcaaaagataaa 11690699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 11049808 - 11049729
Alignment:
Q  36 acctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaacacac 118  Q
    |||||||||||||||||||||||||| |||||| |  ||||||||||||||| |||||  ||||||  ||||||||||||||||    
T  11049808 acctagatctaatctaggaatcaaagtgaaaagtacaaaaccacaagcaaaatataaa--gagaga--agagaaacaaacacac 11049729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 13122031 - 13121942
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacaca 117  Q
    |||||| ||||| |||||||| |||||||| |||||| | ||||| |||||| ||||||||||||||||||  ||||||  |||||||||||||||    
T  13122031 caacaataacaa-acctagatgtaatctagaaatcaa-gtgaaaaacataaaaccacaagcaaaagataaa--gagaga--agagaaacaaacaca 13121942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 2e-47; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 5408951 - 5409067
Alignment:
Q  7 gagcacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagag 106  Q
    |||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  5408951 gagcacaagcaataatcaacaataacaacacctagatctaatctaggaatcaaagagaaaagcacaaaccacaagcaaaagataaaaggagagaagagag 5409050  T
Q  107 aaacaaacacaccaaag 123  Q
    |||||||||||||||||    
T  5409051 aaacaaacacaccaaag 5409067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 5413276 - 5413392
Alignment:
Q  7 gagcacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagag 106  Q
    |||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  5413276 gagcacaagcaataatcaacaataacaacacctagatctaatctaggaatcaaagagaaaagcacaaaccacaagcaaaagataaaaggagagaagagag 5413375  T
Q  107 aaacaaacacaccaaag 123  Q
    |||||||||||||||||    
T  5413376 aaacaaacacaccaaag 5413392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 31404556 - 31404672
Alignment:
Q  7 gagcacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagag 106  Q
    |||||||  ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  31404556 gagcacaagcaataatcaacaataacagcacctagatctaatctaggaatcaaagaggaaagcacaaaccacaagcaaaagataaaaggagagaagagag 31404655  T
Q  107 aaacaaacacaccaaag 123  Q
    |||||||||||||||||    
T  31404656 aaacaaacacaccaaag 31404672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 5406109 - 5406197
Alignment:
Q  35 cacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  5406109 cacctagatctaatctaggaatcaaagagaaaagcacaaaccacaaacaaaagataaaaggagagaagagagaaacaaacacaccaaag 5406197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 5410434 - 5410522
Alignment:
Q  35 cacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  5410434 cacctagatctaatctaggaatcaaagagaaaagcacaaaccacaaacaaaagataaaaggagagaagagagaaacaaacacaccaaag 5410522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 16452218 - 16452326
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagc-aaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| |||||||| ||||||||||| |||| |||||| ||||||||||||||||||||    
T  16452218 caataatcaacaataacatcacctagatctaatctaggaatcaaagtgaaaagcacaaaccacaagcaaaaatataaaaggagagaagagagaaacaaac 16452317  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  16452318 acaccaaag 16452326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 9182921 - 9183029
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||| |  |||||||||||||||||||||  ||||||||||||  ||||||    
T  9182921 caataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaagtacaaaaccacaagcaaaagataaagggagagaagagagggacaaac 9183020  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  9183021 acaccaaag 9183029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 30834424 - 30834533
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaag--cataaaccacaagcaaaagataaaatgagagaagagagaaacaaa 113  Q
    ||||||||||||| |||| ||||||||||||||||| ||||||||| |||||   || ||||||||||||||| |||||| ||||||||||| |||||||    
T  30834424 caataatcaacaataacagcacctagatctaatctatgaatcaaagtgaaaaaaacacaaaccacaagcaaaatataaaaggagagaagagataaacaaa 30834523  T
Q  114 cacaccaaag 123  Q
    ||||||||||    
T  30834524 cacaccaaag 30834533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 33160254 - 33160349
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagat-aaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| ||||||||  ||||||||| |||||||| |||| |||||||||||||||||||||||||||||    
T  33160254 aacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaaacaaaagataaaaaggagagaagagagaaacaaacacaccaaag 33160349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 16569279 - 16569192
Alignment:
Q  35 cacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||||||||||||||||| |||||||| |||||||  ||| ||||||||||||||||||  |||||||||||||||||||||||||||||    
T  16569279 cacctagatctaatctagaaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagaagagagaaacaaacacaccaaag 16569192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 2171417 - 2171526
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaag---agaaaagcataaaccacaagcaaaagataaaa-tgagagaagagagaaaca 111  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||   | |||| |||||| |||||||| |||||||||  ||||||||||| |||||    
T  2171417 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaaaaaacataaaacacaagcacaagataaaagggagagaagagataaaca 2171516  T
Q  112 aacacaccaa 121  Q
    || |||||||    
T  2171517 aatacaccaa 2171526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 33211086 - 33211183
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    |||||| || ||||||||||||||||||||||||||||| ||||| ||  |||||||||||||||||||||  ||||||  ||||||||||||| |||||    
T  33211086 caacaataataacacctagatctaatctaggaatcaaagtgaaaatcacaaaaccacaagcaaaagataaa--gagaga--agagaaacaaacataccaa 33211181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 3072647 - 3072753
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgaga--gaagagagaaacaaa 113  Q
    |||||||||||||||| | ||| ||||||||||||||||| | ||| |||||||||||| |||||||| ||||||||| ||||  ||||||  |||||||    
T  3072647 caataatcaacaaaaatagcacatagatctaatctaggaaac-aagtgaaaagcataaaacacaagcacaagataaaaggagagggaagaggaaaacaaa 3072745  T
Q  114 cacaccaa 121  Q
     |||||||    
T  3072746 gacaccaa 3072753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 14521585 - 14521659
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaaga 103  Q
    |||||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||||| ||||| ||||    
T  14521585 aacaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcataagataaagtgagaaaaga 14521659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 28137309 - 28137377
Alignment:
Q  25 acaaaaacaacacctagatctaatctaggaatcaaagagaaaagcata-aaccacaagcaaaagataaa 92  Q
    |||| |||||||| |||||||||| |||||||||||| |||||||| | ||||||||||||||||||||    
T  28137309 acaataacaacacatagatctaatataggaatcaaagtgaaaagcacataaccacaagcaaaagataaa 28137377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 3038831 - 3038921
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaag--cataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||| ||| |||||||| ||||||  || |||||||||||||||||||||  ||||||  | |||||||||||||||||||    
T  3038831 aacaacacctagatctaatatagtaatcaaagtgaaaagttca-aaaccacaagcaaaagataaa--gagaga--aaagaaacaaacacaccaaag 3038921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 26954187 - 26954251
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaa 86  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||  |||||||||| ||||    
T  26954187 caacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagaaaaa 26954251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 5e-45; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 34254212 - 34254328
Alignment:
Q  7 gagcacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagag 106  Q
    |||||||  ||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  34254212 gagcacaagcaataatcaacaataacagcacctagatctaatctaggaatcaaagagaaaagcacaaaccacaagcaaaagataaaaggagagaagagag 34254311  T
Q  107 aaacaaacacaccaaag 123  Q
    |||||||||||||||||    
T  34254312 aaacaaacacaccaaag 34254328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 34256388 - 34256504
Alignment:
Q  7 gagcacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagag 106  Q
    |||||||  ||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  34256388 gagcacaagcaataatcaacaataacagcacctagatctaatctaggaatcaaagagaaaagcacaaaccacaagcaaaagataaaaggagagaagagag 34256487  T
Q  107 aaacaaacacaccaaag 123  Q
    |||||||||||||||||    
T  34256488 aaacaaacacaccaaag 34256504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 7 - 123
Target Start/End: Complemental strand, 44304142 - 44304026
Alignment:
Q  7 gagcacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagag 106  Q
    |||||||  ||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||| ||||||||||||    
T  44304142 gagcacaagcaataatcaacaataacaacacctagatctaatctagaaatcaaagtgaaaagcacaaaccacaagcaaaagataaaaggagagaagagag 44304043  T
Q  107 aaacaaacacaccaaag 123  Q
    |||||||||||||||||    
T  44304042 aaacaaacacaccaaag 44304026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 17982931 - 17982824
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaaca 115  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  17982931 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaccacaagcaaaatataaaaggagagaagagagaaacaaaca 17982832  T
Q  116 caccaaag 123  Q
    ||||||||    
T  17982831 caccaaag 17982824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 19945249 - 19945356
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaaca 115  Q
    ||||||||||||| |||| ||||||||||||||||||||||| ||| |||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  19945249 caataatcaacaataacagcacctagatctaatctaggaatcgaagtgaaaagcacaaaccacaagcaaaatataaaaggagagaagagagaaacaaaca 19945348  T
Q  116 caccaaag 123  Q
    ||||||||    
T  19945349 caccaaag 19945356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 4731942 - 4731828
Alignment:
Q  10 cacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaa 108  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||  |||||||||||| |    
T  4731942 cacaaacaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagaagagagga 4731843  T
Q  109 acaaacacaccaaag 123  Q
    |||||||||||||||    
T  4731842 acaaacacaccaaag 4731828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 1746109 - 1746214
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaaca 115  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||  ||||||  ||||||||||||||| |||||| |||||||||||||||||||||    
T  1746109 caataatcaacaataacagcacctagatctaatctaggaatcaaagtcaaaagcgcaaaccacaagcaaaatataaaaggagagaagagagaaacaaaca 1746208  T
Q  116 caccaa 121  Q
    ||||||    
T  1746209 caccaa 1746214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 30143618 - 30143510
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||  |||||||||||| |||||||    
T  30143618 caataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagagaagagaggaacaaac 30143519  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  30143518 acaccaaag 30143510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 42498473 - 42498365
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||| ||||| || ||| ||||||||||||||||||| |||||||||| |||||||||    
T  42498473 caataattaacaataacaacacctagatctaatctaggaatcaaagtgaaaaacacaaaaccacaagcaaaagataaaaggagagaagagggaaacaaac 42498374  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  42498373 acaccaaag 42498365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 31218535 - 31218428
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaaca 115  Q
    ||||||||||||| |||| ||||||||||||||||||||| ||||| |||||||| ||| || ||||| ||||||||| |||||||||||||||||||||    
T  31218535 caataatcaacaataacagcacctagatctaatctaggaaacaaagtgaaaagcacaaaacataagcacaagataaaaggagagaagagagaaacaaaca 31218436  T
Q  116 caccaaag 123  Q
    ||||||||    
T  31218435 caccaaag 31218428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 15213070 - 15212956
Alignment:
Q  10 cacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaa 108  Q
    |||| |||||||||||||| |||| ||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||||||||| |    
T  15213070 cacaaacaataatcaacaataacagcaccttgatctaatctaggaatcaaagtgaaaagcacaaagccacaagcaaaagataaagggagagaagagagga 15212971  T
Q  109 acaaacacaccaaag 123  Q
    |||||||||||||||    
T  15212970 acaaacacaccaaag 15212956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 33352428 - 33352320
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||| ||||| || ||| ||||||||||||||||||| |||| ||||||| |||||||    
T  33352428 caataatcaacaataacaacacctaaatctaatctagaaatcaaagtgaaaaacacaaatccacaagcaaaagataaaaggagataagagaggaacaaac 33352329  T
Q  115 acaccaaag 123  Q
    ||| |||||    
T  33352328 acatcaaag 33352320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 27811556 - 27811448
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||  ||| |||||||||||||||||   ||||||||| | || ||||    
T  27811556 caataatcaacaataacaacacctagatctaatttaggaatcaaagtgaaaagcacaaaatcacaagcaaaagataaagcaagagaagaggggaaaaaac 27811457  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  27811456 acaccaaag 27811448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 4733984 - 4733876
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| ||||||||||||||| ||| |||||| ||||  |||||||| ||| ||||||| ||||||||||   ||||||||||| |||||||    
T  4733984 caataatcaacaataacaacacctagatcaaatgtaggaaacaaaatgaaaagcacaaaaccacaaggaaaagataaaggtagagaagagaggaacaaac 4733885  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  4733884 acaccaaag 4733876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 4743122 - 4743212
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||||||||||||||||||||||||||||||| ||||||||  ||||||||||| |||||||||  ||||||  |||||||||||||||||||||    
T  4743122 aacaacacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcgaaagataaa--gagaga--agagaaacaaacacaccaaag 4743212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 43036687 - 43036593
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||| |||||||||||||||||| || ||||| |||||||  ||| ||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  43036687 aacaccacctagatctaatctagtaaccaaagtgaaaagctcaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaaag 43036593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 2628012 - 2627910
Alignment:
Q  20 aatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgaga--gaagagagaaacaaacaca 117  Q
    ||||||||| |||||||||||||||||||||||||| | ||| |||||||||||| |||||||| ||||||||| ||||  ||||||  ||||||| |||    
T  2628012 aatcaacaataacaacacctagatctaatctaggaaac-aagtgaaaagcataaaacacaagcacaagataaaaggagagggaagaggaaaacaaagaca 2627914  T
Q  118 ccaa 121  Q
    ||||    
T  2627913 ccaa 2627910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 1292365 - 1292460
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||   ||||||| ||||||||||  || ||||||  |||||||||||||||||||    
T  1292365 caacaataacaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacgagcaaaagat--aaggagaga--agagaaacaaacacaccaa 1292460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 41366514 - 41366613
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||||||  ||||||||| |||||||| ||||| ||||||||| ||  |||||||||||    
T  41366514 caacaataacaacacctagatctaatataggaatcaaagtgaaaagcacaaaaccacaaacaaaagat-aaatgggagaagaga-aacaaaacacaccaa 41366611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 40321340 - 40321250
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| |||||||   |||||||||||||||||||||  ||||||  ||||||||||||||| |||||    
T  40321340 aacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagaga--agagaaacaaacacatcaaag 40321250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 12702541 - 12702632
Alignment:
Q  34 acacctagatctaatctaggaa-tcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||| || |||||| ||||| || ||| ||||||||| ||||||||  ||||||||||||||||||||| |||||||    
T  12702541 acacctagatctaatctagaaaatcaaagtgaaaaacacaaaaccacaagcacaagataaagggagagaagagagaaacaaacataccaaag 12702632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 18105972 - 18106053
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagaga 105  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||| ||  ||| |||||||||||||||||  |||||||||||    
T  18105972 caacaataacatcacctagatctaatctaggaatcaaagtgaaaaacacaaaatcacaagcaaaagataaa--gagagaagaga 18106053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 6599233 - 6599170
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaa 92  Q
    ||||||||||||||||||||||| |||||||| ||||||||  |||||||||| ||||||||||    
T  6599233 aacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagaaaaagataaa 6599170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 6674686 - 6674623
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaa 92  Q
    ||||||||||||||||||||||| |||||||| ||||||||  |||||||||| ||||||||||    
T  6674686 aacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagaaaaagataaa 6674623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 18142078 - 18141986
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaagtg 125  Q
    ||||||||||| ||||||||||| |||||||| |||||||   ||||||||||||||||||||    |||||  |||||||||| ||||||||||||    
T  18142078 aacaacacctacatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagagcagagaaacaagcacaccaaagtg 18141986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 19491599 - 19491694
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    |||||| ||||||||||| ||||||||||||||||||||  ||||||   ||||||||| ||||||||||| |||||    | |||||||||||||||||    
T  19491599 caacaataacaacacctatatctaatctaggaatcaaagtaaaaagctcaaaaccacaaacaaaagataaagtgaga----aaagaaacaaacacaccaa 19491694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 1345282 - 1345369
Alignment:
Q  33 aacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||||||||||||||||||| |||||||| ||||| |   ||| |||||||||||||||||  ||||||  |||||||||||||||||||||    
T  1345282 aacacctagatctaatctagtaatcaaagtgaaaatctcaaaatcacaagcaaaagataaa--gagaga--agagaaacaaacacaccaaag 1345369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 3303578 - 3303668
Alignment:
Q  34 acacctagatctaatctaggaatcaa----agagaaaagcataaac-cacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||||||    || |||||| | |||  |||||||||||||||||  ||||||||||  |||||||||||||||||    
T  3303578 acacctagatctaatctaggaatcaatcaaagtgaaaagtacaaaatcacaagcaaaagataaa--gagagaagag--aaacaaacacaccaaag 3303668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 30291865 - 30291778
Alignment:
Q  33 aacacctagatctaatctaggaatcaaagagaaaag--cataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||| ||| ||||||||||| |||||||| | ||||  || |||||||||||||||||||||  |||||||||||  ||||||||||||||||    
T  30291865 aacatctaaatctaatctagtaatcaaagtggaaagttca-aaaccacaagcaaaagataaa--gagagaagaga--aacaaacacaccaaag 30291778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 4162736 - 4162692
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaa 67  Q
    |||||| || || |||||||||||||||||||||||||| |||||    
T  4162736 caacaataataaaacctagatctaatctaggaatcaaagtgaaaa 4162692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 5689531 - 5689441
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||| ||| ||||||| ||| |||||||| |||||||  ||| ||||||| ||||||||||  |||||||||||  |||||||||| |||||    
T  5689531 aacaacatctaaatctaatttagtaatcaaagtgaaaagctcaaaaccacaagtaaaagataaa--gagagaagaga--aacaaacacatcaaag 5689441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 10015339 - 10015277
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaag--cataaaccacaagcaaaagataa 91  Q
    ||||| ||||||||||||| ||| |||||||| ||||||  || ||||||||||||||||||||    
T  10015339 aacaatacctagatctaatttagtaatcaaagtgaaaagttca-aaaccacaagcaaaagataa 10015277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 8e-44; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 29991330 - 29991224
Alignment:
Q  17 aataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaacac 116  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  29991330 aataatcaacaataacaacacctagatctaatataggaatcaaagagaaaagcacaaaccacaagcaaaagataaaaggagagaagagagaaacaaacac 29991231  T
Q  117 accaaag 123  Q
    |||||||    
T  29991230 accaaag 29991224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 4179051 - 4178944
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaaca 115  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| ||||| || ||||||||||||||| |||||| |||||||||||||||||||||    
T  4179051 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaaacacaaaccacaagcaaaatataaaaggagagaagagagaaacaaaca 4178952  T
Q  116 caccaaag 123  Q
    ||||||||    
T  4178951 caccaaag 4178944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 27348101 - 27347987
Alignment:
Q  10 cacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaa 108  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||||||||| ||||| || ||| |||||||||||||||||| ||||||||||||| |    
T  27348101 cacaaacaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaaacacaaaaccacaagcaaaagataaagtgagagaagagagga 27348002  T
Q  109 acaaacacaccaaag 123  Q
    |||||||||||||||    
T  27348001 acaaacacaccaaag 27347987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 23555319 - 23555211
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataa-accacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||  |||| || || |||||||||||||||||||| ||||||||||||||||||||    
T  23555319 caataatcaacaataacaacacctagatctaatctaggaatcaaagtaaaaaacacaataccacaagcaaaagataaaaggagagaagagagaaacaaac 23555220  T
Q  115 acaccaaag 123  Q
    ||| |||||    
T  23555219 acatcaaag 23555211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 35854200 - 35854088
Alignment:
Q  10 cacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaa-tgagagaagagagaa 108  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||| ||||| |||||||||||| |||||||| |||||||||  ||||||||||||||    
T  35854200 cacaaacaataatcaacaataacagcacctagatctaatctaggaagcaaagtgaaaagcataaaacacaagcacaagataaaagggagagaagagagaa 35854101  T
Q  109 acaaacacaccaa 121  Q
    |||||||||||||    
T  35854100 acaaacacaccaa 35854088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 48489709 - 48489601
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||  | |||||||||| |||||||    
T  48489709 caataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggcgagaagagaggaacaaac 48489610  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  48489609 acaccaaag 48489601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 43864522 - 43864417
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||  |||||||||||| |||||||    
T  43864522 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagaagagaggaacaaac 43864423  T
Q  115 acacca 120  Q
    ||||||    
T  43864422 acacca 43864417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 25616133 - 25616024
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgag-agaagagagaaacaaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||  |||||||||||| ||||||||  ||| ||||||||||||||||    
T  25616133 caataatcaacaataacaacacctagatctaatctaggaatcgaagtgaaaagcacaaaaccacaagcacaagataaagagagaagaagagagaaacaaa 25616034  T
Q  114 cacaccaaag 123  Q
    ||||||||||    
T  25616033 cacaccaaag 25616024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 48409085 - 48408978
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagc-aaaagataaaa-tgagagaagagagaaacaaa 113  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||||| |||||||| ||| ||||||| |||||||||||  |||||||||||||||||||    
T  48409085 caataatcaacaataacagcacctagatctaatctaggtatcaaagtgaaaagcacaaatcacaagcaaaaagataaaagggagagaagagagaaacaaa 48408986  T
Q  114 cacaccaa 121  Q
    ||||||||    
T  48408985 cacaccaa 48408978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 39731649 - 39731540
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgaga--gaagagagaaacaaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| ||||  ||||||  |||||||    
T  39731649 caataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaaccacaagcacaagataaaaggagagggaagaggaaaacaaa 39731550  T
Q  114 cacaccaaag 123  Q
     |||||||||    
T  39731549 gacaccaaag 39731540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 47676040 - 47676134
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  47676040 aacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaatggagagaagagaggaacaaacacaccaaag 47676134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 4586439 - 4586331
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||  ||||||||| |||||||||||  |||||||||||| |||||||    
T  4586439 caataataaacaataacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaaacaaaagataaagggagagaagagaggaacaaac 4586340  T
Q  115 acaccaaag 123  Q
    |||| ||||    
T  4586339 acacgaaag 4586331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 18126924 - 18126814
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagag--aagagagaaacaa 112  Q
    |||||||||| || |||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||  |||||  || |||| |||||    
T  18126924 caataatcaagaataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagaaaatagaggaacaa 18126825  T
Q  113 acacaccaaag 123  Q
    |||||||||||    
T  18126824 acacaccaaag 18126814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 26417594 - 26417488
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| ||||||||| ||||||| ||||||||| |||||||  ||| ||||||||||||||||||  |||||||||||| |||||||    
T  26417594 caataatcaacaataacagcacctagatataatctatgaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagagaagagaggaacaaac 26417495  T
Q  115 acaccaa 121  Q
    |||||||    
T  26417494 acaccaa 26417488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 41648922 - 41649009
Alignment:
Q  35 cacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  41648922 cacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagaagagagaaacaaacacaccaaag 41649009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 47673848 - 47673942
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| |||||| | ||| ||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  47673848 aacaacacctagatctaatctagtaatcaaagtgaaaagtacaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaaag 47673942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 31732859 - 31732967
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| ||||||   |||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||  |||||||||||| |||||||    
T  31732859 caataatcaacaataacaacctttagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagaagagaggaacaaac 31732958  T
Q  115 acaccaaag 123  Q
     ||||||||    
T  31732959 tcaccaaag 31732967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 25766847 - 25766954
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagc-aaaagataaaa-tgagagaagagagaaacaaa 113  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||||| ||||| || ||| ||||||| |||||||||||  ||||||| |||||||||||    
T  25766847 caataatcaacaataacagcacctagatctaatctaggtatcaaagtgaaaaacacaaatcacaagcaaaaagataaaagggagagaatagagaaacaaa 25766946  T
Q  114 cacaccaa 121  Q
    ||||||||    
T  25766947 cacaccaa 25766954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 14069737 - 14069831
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| |||||||   |||||||||||| ||||||||  ||||||||||||  |||||||||||||||    
T  14069737 aacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcacaagataaagggagagaagagagggacaaacacaccaaag 14069831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 14379765 - 14379859
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| |||||||   |||||||||||| ||||||||  ||||||||||||  |||||||||||||||    
T  14379765 aacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcacaagataaagggagagaagagagggacaaacacaccaaag 14379859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 19502443 - 19502349
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| ||||| |  ||| ||||||||| || |||||  |||||||||||||||||||||||||||||    
T  19502443 aacaacacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcacaaaataaagggagagaagagagaaacaaacacaccaaag 19502349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 38671129 - 38671220
Alignment:
Q  31 acaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||||||||||||| ||||||| |||||||| |||||||  ||| |||||||||||||||||   |||||||||||||||||||||||||||||    
T  38671129 acaacacctagatcaaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataag--gagagaagagagaaacaaacacaccaaag 38671220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 43504044 - 43504148
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgaga--gaagagagaaacaaa 113  Q
    |||||||||||||||||| |   ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||| ||||  ||||||  |||||||    
T  43504044 caataatcaacaaaaacagc---tagatctaatctaggaatcaaagtgaaaagcataaaacacaagcacaagataaaaggagagggaagaggaaaacaaa 43504140  T
Q  114 cacaccaa 121  Q
     |||||||    
T  43504141 gacaccaa 43504148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 48491854 - 48491765
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagag 104  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||  ||||||||  |||||||||||||||||||||  ||||||||||    
T  48491854 caataatcaacaataacaacgcctagatctaatataggaatcaaaatgaaaagcacaaaaccacaagcaaaagataaagggagagaagag 48491765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 36146316 - 36146406
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||| ||||||||||||||| |||||||| ||||||| | |||||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  36146316 aacaacatctagatctaatctagtaatcaaagtgaaaagctaaaaaccacaagcaaaagataaa--gagaga--agagaaacaaacacaccaaag 36146406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 41317342 - 41317432
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| |||||||   |||||||||||||||||||||  |||||    ||||||||||||||||||||    
T  41317342 aacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagag----gagaaacaaacacaccaaag 41317432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 1113924 - 1113827
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    |||||| || ||||||||||||||||||||||||||||  ||||| ||  |||||||||||||||||||||  ||||    |||||||||||||||||||    
T  1113924 caacaataataacacctagatctaatctaggaatcaaaatgaaaaacacaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 1113829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 495872 - 495981
Alignment:
Q  10 cacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaa 108  Q
    |||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||||  |  ||| ||||||||| |||||||  ||||||  | ||||    
T  495872 cacaaacaataa-caacaataacaacacctagatctaatctaggaatcaaagtgaaaaatagaaaatcacaagcaagagataaa--gagaga--aaagaa 495966  T
Q  109 acaaacacaccaaag 123  Q
    |||||||||||||||    
T  495967 acaaacacaccaaag 495981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 23564962 - 23565058
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaa--gcataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacacca 120  Q
    |||||| ||||| ||||||||||||||||| |||||||| |||||   || |||||||||||||||||||||  ||||    ||||||||||||||||||    
T  23564962 caacaataacaaaacctagatctaatctagaaatcaaagtgaaaatcacaaaaaccacaagcaaaagataaatagaga----agagaaacaaacacacca 23565057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 24525410 - 24525500
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||| ||| ||| |||||||| |||||||   |||||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  24525410 aacaacacctagatcaaatttagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagaga--agagaaacaaacacaccaaag 24525500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 8153602 - 8153512
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||||||||||||||| |||||  |||||||| |||||||   |||||||||||||||||||||  ||||||  ||||||| |||||||||||||    
T  8153602 aacaacacctagatctgatctaataatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagaga--agagaaataaacacaccaaag 8153512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 31105293 - 31105357
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaa 86  Q
    |||||| ||||||||| |||||||||||||||||||||| |||||||   |||||||||||||||    
T  31105293 caacaataacaacaccaagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaa 31105357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 31519155 - 31519115
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagca 70  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  31519155 aacaacacctagatctaatctaggaatcaaagtgaaaagca 31519115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 12097789 - 12097865
Alignment:
Q  44 ctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||| |||||||| |||||||  ||| ||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  12097789 ctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagaga--agagaaacaaacacaccaaag 12097865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 30024660 - 30024714
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagca 83  Q
    ||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||    
T  30024660 aacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagca 30024714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 2759144 - 2759193
Alignment:
Q  72 aaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    |||||| ||||||||||||||  ||||||||||||||| |||||||||||    
T  2759144 aaaccataagcaaaagataaagggagagaagagagaaagaaacacaccaa 2759193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 1e-42; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 7 - 123
Target Start/End: Complemental strand, 25413047 - 25412931
Alignment:
Q  7 gagcacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagag 106  Q
    |||||||  ||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  25413047 gagcacaagcaataatcaacaataacagcacctatatctaatctaggaatcaaagagaaaagcacaaaccacaagcaaaagataaaaggagagaagagag 25412948  T
Q  107 aaacaaacacaccaaag 123  Q
    |||||||||||||||||    
T  25412947 aaacaaacacaccaaag 25412931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 13343338 - 13343231
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaaca 115  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  13343338 caataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaaccacaagcaaaatataaaaggagagaagagagaaacaaaca 13343239  T
Q  116 caccaaag 123  Q
    || |||||    
T  13343238 catcaaag 13343231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 30182867 - 30182759
Alignment:
Q  15 acaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| ||| |||||||| ||||||||| ||||||||||||||||||||    
T  30182867 acaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaaacacaagcacaagataaaaggagagaagagagaaacaaac 30182768  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  30182767 acaccaaag 30182759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 36073933 - 36074040
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaaca 115  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| |||||||| ||| ||||||||||| |||||| |||||||||||||||||||||    
T  36073933 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaatcacaagcaaaacataaaaggagagaagagagaaacaaaca 36074032  T
Q  116 caccaaag 123  Q
    ||||||||    
T  36074033 caccaaag 36074040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 30682813 - 30682921
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||  |||||||||||||||||| |||||||||||| |||||||    
T  30682813 caataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaattcacaagcaaaagataaaaggagagaagagaggaacaaac 30682912  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  30682913 acaccaaag 30682921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 13240023 - 13239923
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    |||||| ||||||||||||||||||||||| |||||||| ||||| || ||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  13240023 caacaataacaacacctagatctaatctagtaatcaaagtgaaaaacacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 13239924  T
Q  122 a 122  Q
    |    
T  13239923 a 13239923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 16409757 - 16409648
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgaga--gaagagagaaacaaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| |||||||| ||||||||| ||||  ||||||  |||||||    
T  16409757 caataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcataaaacacaagcacaagataaaaggagagggaagaggaaaacaaa 16409658  T
Q  114 cacaccaaag 123  Q
     |||||||||    
T  16409657 gacaccaaag 16409648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 26178164 - 26178055
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgaga--gaagagagaaacaaa 113  Q
    ||||||||||  | |||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||| ||||  ||||||  |||||||    
T  26178164 caataatcaatgataacaacacctagatctaatctaggaatcaaagtgaaaagcataaaacacaagcacaagataaaaggagagggaagaggaaaacaaa 26178065  T
Q  114 cacaccaaag 123  Q
     |||||||||    
T  26178064 gacaccaaag 26178055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 39468433 - 39468547
Alignment:
Q  10 cacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaa 108  Q
    |||| |||||||||||||| |||| |||||||||||||||||| |||||||| ||||||||  ||||||| |||| ||||||||  |||||||||||| |    
T  39468433 cacaaacaataatcaacaataacagcacctagatctaatctagaaatcaaagtgaaaagcacaaaaccacgagcacaagataaagggagagaagagagga 39468532  T
Q  109 acaaacacaccaaag 123  Q
    |||||||||| ||||    
T  39468533 acaaacacactaaag 39468547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 21 - 123
Target Start/End: Original strand, 42426130 - 42426233
Alignment:
Q  21 atcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacacc 119  Q
    ||||| || ||||||||||||||||||||||| |||||||| |||||||  ||| ||||||||||||||||||  |||||||||||| |||||||||||     
T  42426130 atcaataataacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaca 42426229  T
Q  120 aaag 123  Q
    ||||    
T  42426230 aaag 42426233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 19806627 - 19806533
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||| ||||||||||| |||||||| ||||||| | |||||||||||||||||||||  |||||||||||| ||||||||| ||||||    
T  19806627 aacaacacctaaatctaatctagtaatcaaagtgaaaagctaaaaaccacaagcaaaagataaagggagagaagagaggaacaaacaccccaaag 19806533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 28750559 - 28750653
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||| ||| |||||||| ||| |||||||||||| |||||  |||||||||||| ||||||||||||||||    
T  28750559 aacaacacctagatctaatctagtaatccaagtgaaaagcacaaaaccacaagcaaaatataaagggagagaagagaggaacaaacacaccaaag 28750653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 37439406 - 37439312
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||||||||||| |||||||||| |||||||  |||||||| ||| ||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  37439406 aacaacacctaggtctaatctagtaatcaaaatgaaaagcacaaaaccacaagcataagataaagggagagaagagagaaacaaacacaccaaag 37439312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 26171030 - 26170935
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgaga--gaagagagaaacaaacacaccaaag 123  Q
    |||||||||||||||||||||||||||||||  |||||||||||| |||||||| ||||||||| ||||  ||||||  ||||||| |||||||||    
T  26171030 aacaacacctagatctaatctaggaatcaaaatgaaaagcataaaacacaagcacaagataaaaggagagggaagaggaaaacaaagacaccaaag 26170935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 8565854 - 8565943
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    ||||||||||||||||||||||| |||||||| |||||||   |||||||||||||||||||||  ||||||||||| |||||||||||||||    
T  8565854 aacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagaagaga-aaacaaacacaccaa 8565943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 32637097 - 32636994
Alignment:
Q  21 atcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaac-cacaagcaaaagataaaatgagagaagagagaaacaaacacacc 119  Q
    ||||| || ||||||||||||||||||||||| |||||||| ||||| |  |||  |||||||| ||||||||  ||| |||||||||||||||||||||    
T  32637097 atcaataataacaacacctagatctaatctagtaatcaaagtgaaaaactcaaaatcacaagcacaagataaagggagggaagagagaaacaaacacacc 32636998  T
Q  120 aaag 123  Q
    ||||    
T  32636997 aaag 32636994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 42428334 - 42428428
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| |||||||   |||||||||||||||||||||  ||||||| |||  ||||||||||| ||||    
T  42428334 aacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagagaaaagaagaacaaacacactaaag 42428428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 16649738 - 16649801
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaa 92  Q
    ||||||||||||||||||||||| |||||||| ||||||||  |||||||||||||||||||||    
T  16649738 aacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaa 16649801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 33831938 - 33831850
Alignment:
Q  35 cacctagatctaatctaggaatcaaagagaaaa-gcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||||| |||||||||||||||||||| ||||| ||  ||| ||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  33831938 cacctaaatctaatctaggaatcaaagtgaaaaagctcaaagccacaagcaaaagataaa--gagagaagagagaaacaaaaacaccaaag 33831850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 5887338 - 5887432
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaa--gcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||| ||||||||||| |||||||  ||||| | |||| ||||||  ||||||||||||  |||||||||||||||||||||||||||||    
T  5887338 aacaacacctaaatctaatctagtaatcaaaatgaaaaacttaaaaccacaaaagcaaaagataaa--gagagaagagagaaacaaacacaccaaag 5887432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 538285 - 538195
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||| ||||||||||||||| |||||||| |||||||   |||||||||||||||||||||  ||||||  ||||||| |||||||||||||    
T  538285 aacaacatctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagaga--agagaaagaaacacaccaaag 538195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 31183238 - 31183141
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaa-----aagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||| ||||||||||| |||||||| |||||||  ||| ||||||||||     ||||||||  |||||||||||||||||||||||||||||    
T  31183238 aacaacacctatatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaattcaaaagataaa--gagagaagagagaaacaaacacaccaaag 31183141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 42927164 - 42927099
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaag 87  Q
    |||||| |||||||||||||||||||||||||||||||| ||||| |   ||||||||||||||||    
T  42927164 caacaataacaacacctagatctaatctaggaatcaaagtgaaaaactcaaaaccacaagcaaaag 42927099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 13488465 - 13488373
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| ||||| |   ||||||||||||||||  |||  |||||||||||| |||||| |||| ||||    
T  13488465 aacaacacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcaaaag--aaagggagagaagagaggaacaaagacacaaaag 13488373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 16452350 - 16452286
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaa 86  Q
    |||||| |||||||  ||||||||||||||||||||||  |||||||   |||||||||||||||    
T  16452350 caacaataacaacagttagatctaatctaggaatcaaattgaaaagctcaaaaccacaagcaaaa 16452286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 8e-41; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 7 - 123
Target Start/End: Complemental strand, 37408746 - 37408629
Alignment:
Q  7 gagcacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagaga 105  Q
    ||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||||    
T  37408746 gagcacaaacaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcactaaatcacaagcaaaagataaaaggagagaagaga 37408647  T
Q  106 gaaacaaacacaccaaag 123  Q
    ||||||||||||||||||    
T  37408646 gaaacaaacacaccaaag 37408629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 5258034 - 5258141
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaaca 115  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  5258034 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaccacaagcaaaatataaaaggagagaagagagaaacaaaca 5258133  T
Q  116 caccaaag 123  Q
    ||||||||    
T  5258134 caccaaag 5258141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 5260213 - 5260320
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaaca 115  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  5260213 caataatcaacaataacaacacctagatctaatttaggaatcaaagtgaaaagcacaaaccacaagcaaaatataaaaggagagaagagagaaacaaaca 5260312  T
Q  116 caccaaag 123  Q
    ||||||||    
T  5260313 caccaaag 5260320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 7762543 - 7762442
Alignment:
Q  17 aataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaaca 115  Q
    |||||||||||| ||||||||||||||||||| |||||||||||| |||||||| ||| ||||||||||||||||||| |||||||||||||||||||||    
T  7762543 aataatcaacaataacaacacctagatctaatttaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaaca 7762444  T
Q  116 ca 117  Q
    ||    
T  7762443 ca 7762442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 7764743 - 7764635
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| |||||||||||||||| |||||||||| |||||||| ||| |||||| |||||||||||| ||||||||||||||||||||    
T  7764743 caataatcaacaataacagcacctagatctaatcttggaatcaaagtgaaaagcacaaaaccacaaacaaaagataaaaggagagaagagagaaacaaac 7764644  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  7764643 acaccaaag 7764635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 19683778 - 19683886
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| |||||||||||||||||||||| |||| ||||| || ||| ||||||||||||||||||| ||||||||||||||||||||    
T  19683778 caataatcaacaataacagcacctagatctaatctaggaataaaagtgaaaaacacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaac 19683877  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  19683878 acaccaaag 19683886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 9636014 - 9636120
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaa-tgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||  ||||| ||||||||||||||    
T  9636014 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcataaatcacaagcacaagataaaagggagagcagagagaaacaaac 9636113  T
Q  115 acaccaa 121  Q
    |||||||    
T  9636114 acaccaa 9636120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 5236347 - 5236455
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| || | | ||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||| |||||||||||| |||||||    
T  5236347 caataatcaacaataagagctcctagatctaatctaggaatcaaagtgaaaagcacaaatccacaagcaaaagataaaaggagagaagagaggaacaaac 5236446  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  5236447 acaccaaag 5236455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 51399092 - 51398984
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| |||||| |  |||||||||||||||||||||  |||||||||||| |||||||    
T  51399092 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagtacaaaaccacaagcaaaagataaagggagagaagagaggaacaaac 51398993  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  51398992 acaccaaag 51398984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 9634711 - 9634818
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaa-tgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||| | |||||||| |||||||||  ||||||||||||||||||||    
T  9634711 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcatagatcacaagcacaagataaaagggagagaagagagaaacaaac 9634810  T
Q  115 acaccaaa 122  Q
    ||| ||||    
T  9634811 acaacaaa 9634818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 29811146 - 29811038
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||  |||||||||||  |||||||    
T  29811146 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagagaagagatgaacaaac 29811047  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  29811046 acaccaaag 29811038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 7 - 123
Target Start/End: Complemental strand, 45095450 - 45095334
Alignment:
Q  7 gagcacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagag 106  Q
    |||||||  ||||||||||||| |||| ||| ||||||||||||| ||||||||||| ||| || |||||||||||||||||||||| ||||||| ||||    
T  45095450 gagcacaagcaataatcaacaataacagcacatagatctaatctatgaatcaaagagtaaaacacaaaccacaagcaaaagataaaaggagagaatagag 45095351  T
Q  107 aaacaaacacaccaaag 123  Q
    ||||||| || ||||||    
T  45095350 aaacaaatacgccaaag 45095334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 7 - 123
Target Start/End: Complemental strand, 9581570 - 9581453
Alignment:
Q  7 gagcacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagaga 105  Q
    |||||||  ||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||||  |||||||||||| || |||||  |||||||||||    
T  9581570 gagcacaagcaataatcaacaataacagcacctagatctaatctatgaatcaaagtgaaaagcacaaaaccacaagcacaaaataaagggagagaagaga 9581471  T
Q  106 gaaacaaacacaccaaag 123  Q
    |||||||||||| |||||    
T  9581470 gaaacaaacacatcaaag 9581453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 761104 - 761017
Alignment:
Q  35 cacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  761104 cacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagaagagagaaacaaacacaccaaag 761017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 40735666 - 40735553
Alignment:
Q  10 cacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaa 108  Q
    |||| |||||||||||||| |||| |||||||||||||| |||||| ||||| |||||||| ||| ||||||||||||||| ||| |||||||||||| |    
T  40735666 cacaaacaataatcaacaataacagcacctagatctaatataggaaccaaagtgaaaagcacaaatccacaagcaaaagat-aaaggagagaagagagga 40735568  T
Q  109 acaaacacaccaaag 123  Q
    ||||| |||||||||    
T  40735567 acaaatacaccaaag 40735553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 29813345 - 29813233
Alignment:
Q  10 cacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaa 108  Q
    |||| |||||||||||||| |||| ||||||||||||||||| ||||||||| |||||||   ||||||||| |||||||||||  | |||||||||| |    
T  29813345 cacaaacaataatcaacaataacagcacctagatctaatctaagaatcaaagtgaaaagctcaaaaccacaaccaaaagataaa--gggagaagagagga 29813248  T
Q  109 acaaacacaccaaag 123  Q
    ||||||||| |||||    
T  29813247 acaaacacatcaaag 29813233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 40734774 - 40734668
Alignment:
Q  17 aataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaaca 115  Q
    |||||| || || |||| ||||||||||||||||||||||||||| | |||||| ||| ||||||||||||||| ||| |||||||||||| ||||||||    
T  40734774 aataataaaaaataacagcacctagatctaatctaggaatcaaagtgcaaagcacaaatccacaagcaaaagat-aaaggagagaagagaggaacaaaca 40734676  T
Q  116 caccaaag 123  Q
    | ||||||    
T  40734675 ctccaaag 40734668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 22834903 - 22834973
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaa 92  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  22834903 caacaataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaa 22834973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 21350904 - 21350999
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcata-aaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    |||||| |||||||| ||||||||||||||||||||||| |||||||  | ||||||||||| |||||||| |||||    |||||||||||||||||||    
T  21350904 caacaataacaacacttagatctaatctaggaatcaaagtgaaaagctcataaccacaagcataagataaagtgaga----agagaaacaaacacaccaa 21350999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 9666374 - 9666464
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| |||||||   ||||||||||||||||||||    |||||  |||||||||||||||||||||    
T  9666374 aacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataa----agagataagagaaacaaacacaccaaag 9666464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 29196294 - 29196384
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||| | |||||||| |||||||   |||||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  29196294 aacaacacctagatctaatctggtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagaga--agagaaacaaacacaccaaag 29196384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 23200027 - 23200109
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagag 99  Q
    ||||||||||||| || ||||||||||||||||||||||| ||||  ||||| || |||||||||||| ||||||||| |||||    
T  23200027 caataatcaacaataa-aacacctagatctaatctaggaaacaaaatgaaaaacacaaaccacaagcataagataaaaggagag 23200109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 23197828 - 23197936
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaa--tgagagaagagagaaacaaa 113  Q
    ||||||||||||| || ||||| ||||||||||||||||| ||||  ||||| || |||||||||||| |||||||||   ||||||||||  |||||||    
T  23197828 caataatcaacaataa-aacacatagatctaatctaggaaacaaaatgaaaaacacaaaccacaagcacaagataaaaggagagagaagaggaaaacaaa 23197926  T
Q  114 cacaccaaag 123  Q
     |||||||||    
T  23197927 gacaccaaag 23197936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 29682616 - 29682529
Alignment:
Q  35 cacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||| ||||||||||||| ||||| |   |||||||||||||||||||||  | ||||||||||||||| |||||||||||    
T  29682616 cacctagatctaacctaggaatcaaagtgaaaaactcaaaaccacaagcaaaagataaa--gggagaagagagaaacatacacaccaaag 29682529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 23391816 - 23391907
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagag-aaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| | |||| ||  |||||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  23391816 aacaacacctagatctaatctagtaatcaaagtgaaaaaacacaaaaccacaagcaaaagataaa--gagaga--agagaaacaaacacaccaaag 23391907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 31314705 - 31314615
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||| || |||||||| |||||||| |||||||   |||||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  31314705 aacaacacctaaatataatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagaga--agagaaacaaacacaccaaag 31314615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 32891364 - 32891276
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    ||||||||||||||||||| |||||||||||| ||||| |   ||||||||||||||||||  || ||||||  |||||||||||||||||||    
T  32891364 aacaacacctagatctaatataggaatcaaagtgaaaaactcaaaaccacaagcaaaagat--aaggagaga--agagaaacaaacacaccaa 32891276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 7779891 - 7779998
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgaga--gaagagagaaacaaa 113  Q
    |||||||||||||||||| ||||||||||||||||||||| |||    |||| || ||  |||||||| ||||||||| ||||  ||||||  |||||||    
T  7779891 caataatcaacaaaaacagcacctagatctaatctaggaaacaagtgaaaaaacacaatacacaagcacaagataaaaggagagggaagaggaaaacaaa 7779990  T
Q  114 cacaccaa 121  Q
     |||||||    
T  7779991 gacaccaa 7779998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 16499288 - 16499199
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||| |||||||||||||||||||  |||||| |  |||||||||||||||||||||  ||||||  ||||||||||| |||||||||    
T  16499288 aacaacacctaaatctaatctaggaatcaaa-tgaaaagtacaaaaccacaagcaaaagataaa--gagaga--agagaaacaaatacaccaaag 16499199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 44700387 - 44700477
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| ||||| |   |||||||||||||| ||||||  ||||||  |||||||||||||||| ||||    
T  44700387 aacaacacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcaaaggataaa--gagaga--agagaaacaaacacacgaaag 44700477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 39153268 - 39153331
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaa 92  Q
    ||||||||||||||||||||||| |||||||| |||||||   |||||||||||| ||||||||    
T  39153268 aacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcacaagataaa 39153331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 32744351 - 32744434
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| |||      ||||||||||||||||||||    |||||   ||||||||||||||||||||    
T  32744351 aacaacacctagatctaatctagaaatcaaagtgaa------aaaccacaagcaaaagataa----agagatatgagaaacaaacacaccaaag 32744434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 6716781 - 6716742
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaa 55  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  6716781 caataatcaaccaaaacaccacctagatctaatctaggaa 6716742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 51352036 - 51352125
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaacaca 117  Q
    |||||| ||||| |||||||||||||||||||||||||  ||||| ||  |||||||||| ||||||||||  ||||||  |||||||||||||||    
T  51352036 caacaataacaa-acctagatctaatctaggaatcaaa-tgaaaaacacaaaaccacaagtaaaagataaa--gagaga--agagaaacaaacaca 51352125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 801368 - 801328
Alignment:
Q  16 caataatcaacaaaaa-caacacctagatctaatctaggaa 55  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  801368 caataatcaacaaaaaacagcacctagatctaatctaggaa 801328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 53921422 - 53921496
Alignment:
Q  41 gatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacac 118  Q
    ||||||||||||||||||||| |||||||   ||||||||| ||||| |||||  ||||||  ||||||||||||||||    
T  53921422 gatctaatctaggaatcaaagtgaaaagctcaaaaccacaaacaaaatataaa--gagaga--agagaaacaaacacac 53921496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 34570298 - 34570412
Alignment:
Q  10 cacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaa 108  Q
    |||| |||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||  |||||||||||||||||||||| |||||||||||| |    
T  34570298 cacaaacaataatcaacaataacaacacctagatctaatctaagaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagagga 34570397  T
Q  109 acaaacacaccaaag 123  Q
    |||||||||||||||    
T  34570398 acaaacacaccaaag 34570412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 52095253 - 52095359
Alignment:
Q  17 aataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaaca 115  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||  |||||||||| ||||||||||| |||||||||||||||||||||    
T  52095253 aataatcaacaataacaacacctagatctaatctaggagtcaaagagaaaagcacaaaaccacaaggaaaagataaaaggagagaagagagaaacaaaca 52095352  T
Q  116 caccaaa 122  Q
    |||||||    
T  52095353 caccaaa 52095359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 52082553 - 52082661
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||    
T  52082553 caataatcaacaataacagcacctagatcttatctaggaatcaaaaagaaaagcataaaaccacaagcaaaagataaaaggagagaagagataaacaaac 52082652  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  52082653 acaccaaag 52082661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 56178526 - 56178634
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||| ||||| ||||||||||||||||||||||||||| |||| |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  56178526 caataataaacaataacaacacctagatctaatctaggaatgaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaac 56178625  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  56178626 acaccaaag 56178634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 5369972 - 5370080
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||||||||||| ||||||||    
T  5369972 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagataaacaaac 5370071  T
Q  115 acaccaaag 123  Q
    ||| |||||    
T  5370072 acatcaaag 5370080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 29999719 - 29999805
Alignment:
Q  35 cacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  29999719 cacctagatctaatctaggaatcaaagagaaaaacacaaaccacaagcaaaagacaaaaggagagaagagagaaacaaacacaccaa 29999805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 48143326 - 48143214
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaa----gcataaac-cacaagcaaaagataaaatgagagaagagagaaac 110  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||    ||| |||  |||||||||||||||||| ||||||||||||||||    
T  48143326 caataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaaaaaagcacaaaatcacaagcaaaagataaaaggagagaagagagaaac 48143227  T
Q  111 aaacacaccaaag 123  Q
    |||||||||||||    
T  48143226 aaacacaccaaag 48143214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 13992181 - 13992290
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagc-aaaagataaaa-tgagagaagagagaaacaaa 113  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||||| |||||||| ||| ||||||| |||||||||||  |||||||||||||||||||    
T  13992181 caataatcaacaataacagcacctagatctaatctaggtatcaaagtgaaaagcacaaatcacaagcaaaaagataaaagggagagaagagagaaacaaa 13992280  T
Q  114 cacaccaaag 123  Q
    ||||||||||    
T  13992281 cacaccaaag 13992290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 37740903 - 37740800
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| |||||||||||||| |||||||||||| ||||||||  |||||||||||||||||||||  |||||||||||| |||||||    
T  37740903 caataatcaacaataacagcacctagatctaatgtaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagaagagaggaacaaac 37740804  T
Q  115 acac 118  Q
    ||||    
T  37740803 acac 37740800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 5429963 - 5429849
Alignment:
Q  10 cacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaa 108  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||||||||| |||||||   |||||||||| ||||||||||  |||||||||||| |    
T  5429963 cacaaacaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagtaaaagataaagggagagaagagagga 5429864  T
Q  109 acaaacacaccaaag 123  Q
    ||||||||| |||||    
T  5429863 acaaacacatcaaag 5429849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 12739454 - 12739548
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||||||||||||||||||| || |||||||| |||||||| ||| ||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  12739454 aacaacacctagatctaatcaagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagaggaacaaacacaccaaag 12739548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 9927349 - 9927456
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||||| ||| ||||||| |||| |||||||    
T  9927349 caataatcaacaataacagcacctagatttaatctaggaatcaaagtgaaaagcacaaatccacaagcaaaagat-aaaggagagaatagaggaacaaac 9927447  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  9927448 acaccaaag 9927456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 47038300 - 47038409
Alignment:
Q  10 cacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaa 108  Q
    |||| ||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||  ||||||  ||||||    
T  47038300 cacaaacaataa-caacaataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaa--gagaga--agagaa 47038394  T
Q  109 acaaacacaccaaag 123  Q
    |||||||||||||||    
T  47038395 acaaacacaccaaag 47038409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 12743829 - 12743923
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaacc-acaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| |||||||| ||| | ||||||||||||||||| |||| ||||||| ||||||||||||||||    
T  12743829 aacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaactacaagcaaaagataaaaggagaaaagagaggaacaaacacaccaaag 12743923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 26175540 - 26175634
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| |||||||  ||| ||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  26175540 aacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaaag 26175634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 54199798 - 54199904
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||| ||| |||| ||||||||||||||||| ||||||||| |||||||| ||| |||||||||||| || ||| |||||||||||| |||||||    
T  54199798 caataatcagcaataacatcacctagatctaatctaagaatcaaagtgaaaagcacaaatccacaagcaaaatat-aaaggagagaagagaggaacaaac 54199896  T
Q  115 acaccaaa 122  Q
    ||||||||    
T  54199897 acaccaaa 54199904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 29254758 - 29254664
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| ||||| || ||| ||||||||||||||||||  ||||||| |||| ||||||||||||||||    
T  29254758 aacaacacctagatctaatctagtaatcaaagtgaaaaacacaaaaccacaagcaaaagataaatggagagaatagaggaacaaacacaccaaag 29254664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 31495196 - 31495272
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaa 93  Q
    ||||||||||||||| || ||||||||||||||||||||| ||||| |||||||||||| |||||||| |||||||||    
T  31495196 caataatcaacaaaa-cagcacctagatctaatctaggaaacaaagtgaaaagcataaaacacaagcacaagataaaa 31495272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 5872082 - 5871990
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| |||||||   |||||| |||||||||||| |  |||||||||||||| ||||||||||||||    
T  5872082 aacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccaaaagcaaaagataga--gagagaagagagaatcaaacacaccaaag 5871990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 52467248 - 52467352
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    |||| ||||| || |||||||| |||||||||||||| |||||||| |||||||   |||||||||||||||||||||  ||||||  ||||||||||||    
T  52467248 caatcatcaataataacaacacatagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagaga--agagaaacaaac 52467343  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  52467344 acaccaaag 52467352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 46147299 - 46147389
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||| ||||||||||||||||| |||||||| |||||||   |||||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  46147299 aacaatacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagaga--agagaaacaaacacaccaaag 46147389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 48893539 - 48893636
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    |||||| |||| ||||||||||||||| | ||||||||| ||||||||  ||| |||||||||||||||||  ||||||  |||||||||||||||||||    
T  48893539 caacaataacagcacctagatctaatccaagaatcaaagtgaaaagcacaaaatcacaagcaaaagataaa--gagaga--agagaaacaaacacaccaa 48893634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 36994783 - 36994694
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaa 122  Q
    ||||||||||||||||||||||| |||||||| ||||| |   |||||||||||||||||||||  ||||||  |||||||||||||| |||||    
T  36994783 aacaacacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcaaaagataaa--gagaga--agagaaacaaacacgccaaa 36994694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 31474418 - 31474323
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||  ||| || |||| |||||||||  ||||    |||||||||||||||||||    
T  31474418 caacaataacaacacctagatctaatctaggaattaaagtgaaaagcacaaaatcaaaagctaaagataaagggaga----agagaaacaaacacaccaa 31474323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 6542080 - 6542175
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    |||||| ||||| ||||||||||||||||||||| |||| ||||| ||  ||| |||||| |||||||||    |||||  |||||||||||||||||||    
T  6542080 caacaataacaaaacctagatctaatctaggaattaaagtgaaaaacacaaaatcacaagaaaaagataa----agagataagagaaacaaacacaccaa 6542175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 12745266 - 12745312
Alignment:
Q  77 acaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||| |||| ||||||| ||||||||||||||||    
T  12745266 acaagcaaaagataaaaggagaaaagagaggaacaaacacaccaaag 12745312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 4588226 - 4588132
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaacacacca 120  Q
    |||||| ||||| ||| | ||||||| |||||||||||| ||||||||  ||| |||||||||||||||||  |||||    |||||||||||||||||    
T  4588226 caacaataacaaaaccaatatctaatataggaatcaaagtgaaaagcacaaaatcacaagcaaaagataaagagagag----gagaaacaaacacacca 4588132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 45687091 - 45687180
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||| ||||||| |||||||| |||||||  ||| |||||||||| |||||||  ||||||| |||  ||||||||||||||||    
T  45687091 aacaacacctagatc-aatctagtaatcaaagtgaaaagctcaaaaccacaagcaacagataaa--gagagaaaaga--aacaaacacaccaaag 45687180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 29056610 - 29056531
Alignment:
Q  38 ctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    |||||||||||||||||||||| | ||||| || ||| |||||| |||||||||||    ||||| |||||||||||||||||||    
T  29056610 ctagatctaatctaggaatcaa-gtgaaaaacacaaaaccacaaacaaaagataaa----gagaaaagagaaacaaacacaccaa 29056531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 36463299 - 36463373
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagaga 105  Q
    ||||||||||||||||||| | | |||||||| ||||| |   |||||||||||||||||||||  |||||||||||    
T  36463299 aacaacacctagatctaatttggtaatcaaagcgaaaaactcaaaaccacaagcaaaagataaa--gagagaagaga 36463373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 48142300 - 48142373
Alignment:
Q  45 taatctaggaatcaaagagaaaagcat-aaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaa 122  Q
    ||||||||||||||| | ||||| ||| ||||||||| |||||||||||  ||||||||||  ||||||||||||||||    
T  48142300 taatctaggaatcaa-gtgaaaaacattaaaccacaatcaaaagataaa--gagagaagag--aaacaaacacaccaaa 48142373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 5e-33; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 3157143 - 3157035
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||  |||||||||||| |||||||    
T  3157143 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagaagagaggaacaaac 3157044  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  3157043 acaccaaag 3157035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 13316242 - 13316349
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaacaaaca 115  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| ||||| || ||||||||||||||| |||||| ||||||||||||||||||||     
T  13316242 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaaacacaaaccacaagcaaaatataaaaggagagaagagagaaacaaact 13316341  T
Q  116 caccaaag 123  Q
    ||| ||||    
T  13316342 cactaaag 13316349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 49918628 - 49918520
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||  |||||||| ||| ||||||||||||||||||| |||||||||||| |||||||    
T  49918628 caataatcaacaataacagcacctatatctaatctaggaatcaaaatgaaaagcacaaatccacaagcaaaagataaaaggagagaagagaggaacaaac 49918529  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  49918528 acaccaaag 49918520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 3189592 - 3189501
Alignment:
Q  33 aacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3189592 aacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaaag 3189501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 3198409 - 3198318
Alignment:
Q  33 aacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3198409 aacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaaag 3198318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 3207248 - 3207157
Alignment:
Q  33 aacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3207248 aacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaaag 3207157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 37503447 - 37503555
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| | ||||||||||||||||||||||||| |||| ||||||||  ||||| |||||||||||||||  |||||||||||| |||||||    
T  37503447 caataatcaacaatatcaacacctagatctaatctaggaattaaagtgaaaagcacaaaaccgcaagcaaaagataaagggagagaagagaggaacaaac 37503546  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  37503547 acaccaaag 37503555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 44455444 - 44455330
Alignment:
Q  10 cacagacaataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaa 108  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||||||||| ||||| ||  |||||| ||||||||||||||   ||||||||||| |    
T  44455444 cacaaacaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaaacacaaaaccaaaagcaaaagataaaggaagagaagagagga 44455345  T
Q  109 acaaacacaccaaag 123  Q
    |||||||||||||||    
T  44455344 acaaacacaccaaag 44455330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 51765677 - 51765568
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgaga--gaagagagaaacaaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| ||||  ||||||  |||||||    
T  51765677 caataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaaccacaagcacaagataaaaggagagggaagaggaaaacaaa 51765578  T
Q  114 cacaccaaag 123  Q
     |||||||||    
T  51765577 gacaccaaag 51765568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 20762946 - 20762843
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| |||||||||||||||||||||     | |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  20762946 caataatcaacaataacagcacctagatctaatctaggaa-----gtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaac 20762852  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  20762851 acaccaaag 20762843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 31659516 - 31659408
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||  |||||||  |||||| ||||||||||||||| ||||||| |||| || ||||    
T  31659516 caataatcaacaataacaacaccttgatctaatctaggaatcaaagtaaaaagcacaaaaccataagcaaaagataaaaggagagaaaagaggaataaac 31659417  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  31659416 acaccaaag 31659408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 834066 - 834165
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    |||||| ||||||||| ||||||||||| |||||||||| |||||||   |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  834066 caacaataacaacaccaagatctaatctgggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagaagagagaaacaaacacaccaa 834163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 28220130 - 28220224
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||  ||||||||||||  |||||||||||||||    
T  28220130 aacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagaagagagggacaaacacaccaaag 28220224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 37559755 - 37559865
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaa-tctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatg-agagaagagagaaacaa 112  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||  | ||||||||||| |||||    
T  37559755 caataatcaacaataacagcacctagatctaaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaggggagagaagagaggaacaa 37559854  T
Q  113 acacaccaaag 123  Q
    |||||||||||    
T  37559855 acacaccaaag 37559865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 3847027 - 3847119
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||| ||| |||||||| |||||||  ||| ||||||||||||||||||  |||||||||||||||||||||||||||||    
T  3847027 aacaacacctagatctaatatagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagagaagagagaaacaaacacaccaaag 3847119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 8550674 - 8550784
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgag-agaagagag-aaacaa 112  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||  ||| |||||||| ||||||||  ||| ||||||||| ||||||    
T  8550674 caataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaaacacaaaatcacaagcacaagataaagagagaagaagagagaaaacaa 8550773  T
Q  113 acacaccaaag 123  Q
    |||||||||||    
T  8550774 acacaccaaag 8550784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 28223325 - 28223419
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaac-cacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| ||||| || |||  |||||||||||||||||  ||||||||||||  |||||||||||||||    
T  28223325 aacaacacctagatctaatctagtaatcaaagtgaaaaacacaaaatcacaagcaaaagataaagggagagaagagagggacaaacacaccaaag 28223419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 196813 - 196905
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||| ||||||||||| |||||||| || ||||  ||| ||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  196813 aacaacacctacatctaatctagtaatcaaagtgagaagctcaaaaccacaagcaaaagataaa--gagagaagagagaaaaaaacacaccaaag 196905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 10925500 - 10925396
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||| |   |||||||||||||||||||||  ||||||  ||| ||||||||    
T  10925500 caataatcaacaataacaacacctagatctaatctagtaatcaaagggaaaaactcaaaaccacaagcaaaagataaa--gagaga--agataaacaaac 10925405  T
Q  115 acaccaaag 123  Q
    ||| |||||    
T  10925404 acatcaaag 10925396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 30476350 - 30476444
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||||||| |||| ||||||||  |||||||| |||||||  ||| ||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  30476350 aacaacacttagacctaatctaataatcaaagtgaaaagctcaaaaccacaagtaaaagataaaaggagagaagagaggaacaaacacaccaaag 30476444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 50167083 - 50167173
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaag--cataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| ||||||  || |||||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  50167083 aacaacacctagatctaatctagtaatcaaagtgaaaagttca-aaaccacaagcaaaagataaa--gagaga--agagaaacaaacacaccaaag 50167173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 40122104 - 40122194
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||| ||| |||||||| |||||||   |||||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  40122104 aacaacacctagatctaatttagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagaga--agagaaacaaacacaccaaag 40122194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 50169118 - 50169208
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||| ||||||||||| |||||||| |||||||   |||||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  50169118 aacaacacctatatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gagaga--agagaaacaaacacaccaaag 50169208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 1833773 - 1833683
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| ||||||||  |||| ||||||||||||||||  ||||||  | | |||||||||||||||||    
T  1833773 aacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaactacaagcaaaagataaa--gagaga--aaataaacaaacacaccaaag 1833683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 13137884 - 13137974
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||||||||||||||| |||||||| ||||| |   |||||||||||||||||||||  ||||||  ||||||||||||||| |||||    
T  13137884 aacaacacctagatctaatctagtaatcaaagtgaaaacctcaaaaccacaagcaaaagataaa--gagaga--agagaaacaaacacatcaaag 13137974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 41361182 - 41361087
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    |||||| ||||||||||| ||||||||||||||||||||  ||||||   ||||||||| ||||||||||| |||||    | |||||||||||||||||    
T  41361182 caacaataacaacacctatatctaatctaggaatcaaagtaaaaagctcaaaaccacaaacaaaagataaagtgaga----aaagaaacaaacacaccaa 41361087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 23555167 - 23555262
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaa 121  Q
    |||||| ||||||||||||||||||| ||||||||| || |||||||   ||||||||||||||| |||||  ||||||  |||||||||||| ||||||    
T  23555167 caacaataacaacacctagatctaatttaggaatcatagtgaaaagctcaaaaccacaagcaaaacataaa--gagaga--agagaaacaaacgcaccaa 23555262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 13659245 - 13659334
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||| |||||||||||||||||||  |||||| |  |||||||||||||||||||||  ||||||  ||||||||||| |||||||||    
T  13659245 aacaacacctaaatctaatctaggaatcaaa-tgaaaagtacaaaaccacaagcaaaagataaa--gagaga--agagaaacaaatacaccaaag 13659334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 28265462 - 28265552
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||| ||||||||||||||| ||||||||  ||||||   ||||||||| |||||||||||  ||||||  |||||||||||||||||||||    
T  28265462 aacaacatctagatctaatctagtaatcaaagtaaaaagctcaaaaccacaaccaaaagataaa--gagaga--agagaaacaaacacaccaaag 28265552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 45644262 - 45644352
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||| ||||||||||||||| |||||||| |||||||   ||||||||| |||||||||||  ||||||  |||||||||| ||||||||||    
T  45644262 aacaacatctagatctaatctagcaatcaaagtgaaaagctcaaaaccacaaacaaaagataaa--gagaga--agagaaacaagcacaccaaag 45644352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 4552552 - 4552615
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagc-ataaaccacaagcaaaagataaa 92  Q
    |||||||| |||||||||||||| |||||||| |||||||   |||||||||||||||||||||    
T  4552552 aacaacacatagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 4552615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 15820574 - 15820479
Alignment:
Q  23 caacaaaaacaacacctagatctaatctaggaatcaaagagaaaag--cataaaccacaagcaaaagataaaatgagagaagagagaaacaaacacacca 120  Q
    |||||| ||||||||||||||||||| ||||||||||| |||||||  |||||| |||||||||  |||  || ||||||  ||||||||||||||||||    
T  15820574 caacaacaacaacacctagatctaatataggaatcaaatagaaaagctcataaa-cacaagcaatggat--aaggagaga--agagaaacaaacacacca 15820480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 8870628 - 8870694
Alignment:
Q  27 aaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaa 92  Q
    ||||| || ||||||||| |||||||||||||||| |||||  |  |||||||||||||||||||||    
T  8870628 aaaaaaaaaacctagatcaaatctaggaatcaaagtgaaaaatacaaaaccacaagcaaaagataaa 8870694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 46065135 - 46065088
Alignment:
Q  72 aaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||||||||||||||||||||  |||||||||||  ||||||||||||||||    
T  46065135 aaaccacaagcaaaagataaa--gagagaagaga--aacaaacacaccaaag 46065088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 434812 - 434705
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaa-tgagagaagagagaaacaaac 114  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| |||||||| ||| |||||||| |||||||||  ||||||||||||||||||||    
T  434812 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaacacaagcacaagataaaagggagagaagagagaaacaaac 434713  T
Q  115 acaccaaa 122  Q
    ||||||||    
T  434712 acaccaaa 434705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 1194 - 1086
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgagagaagagagaaac-aaac 114  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||||| |||||||| ||||||||||||||  |||||| |||||||||||||||| ||||    
T  1194 caataatcaacaataacaccacctagatctaatctaggtatcaaagtgaaaagcacaaaccacaagcaaagtataaaaggagagaagagagaaacaaaac 1095  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  1094 acaccaaag 1086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 114881 - 114773
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||  |||| ||||| ||||||||||| |||||||||||||||||| |    
T  114881 caataatcaacaataacaacacctatatctaatctaggaatcaaagtgaaaagcacaaaacaacaagaaaaagataaaaggagagaagagagaaacaagc 114782  T
Q  115 acaccaaag 123  Q
    |||||||||    
T  114781 acaccaaag 114773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 20305 - 20412
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaa-ccacaagcaaaagataaaatgagagaagagagaaacaaac 114  Q
    ||||||| ||||| |||| ||||||||||||||||||||||||||| ||||| || ||| ||||||||||||||||||  |||||||||||| |||||||    
T  20305 caataattaacaataacagcacctagatctaatctaggaatcaaagtgaaaaacacaaaaccacaagcaaaagataaagggagagaagagaggaacaaac 20404  T
Q  115 acaccaaa 122  Q
    ||||||||    
T  20405 acaccaaa 20412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 8623 - 8732
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaa--atgagagaagagagaaacaaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||||  | ||| ||||||  |||||||    
T  8623 caataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaaccacaagcacaagataaaagaagagggaagaggaaaacaaa 8722  T
Q  114 cacaccaaag 123  Q
     |||||||||    
T  8723 gacaccaaag 8732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 11049 - 11158
Alignment:
Q  16 caataatcaacaaaaacaacacctagatctaatctaggaatcaaagagaaaagcataaaccacaagcaaaagataaaatgaga--gaagagagaaacaaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| || |||||||||||| ||||||||| ||||  ||||||  |||||||    
T  11049 caataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaaacacaaaccacaagcacaagataaaaggagagggaagaggaaaacaaa 11148  T
Q  114 cacaccaaag 123  Q
     |||||||||    
T  11149 gacaccaaag 11158  T

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Target: scaffold1668 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold1668
Description:

Target: scaffold1668; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 1406 - 1496
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagcat-aaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    |||| |||||||||||||||||||||| |||| ||||| ||| |||||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  1406 aacagcacctagatctaatctaggaattaaagtgaaaaacataaaaccacaagcaaaagataaa--gagaga--agagaaacaaacacaccaaag 1496  T

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Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 149006 - 149095
Alignment:
Q  30 aacaacacctagatctaatctaggaatcaaagagaaaagca-taaaccacaagcaaaagataaaatgagagaagagagaaacaaacacaccaaag 123  Q
    ||||||||||| |||||||||||||||||||  |||||| |  |||||||||||||||||||||  ||||||  ||||||||||| |||||||||    
T  149006 aacaacacctaaatctaatctaggaatcaaa-tgaaaagtacaaaaccacaagcaaaagataaa--gagaga--agagaaacaaatacaccaaag 149095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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