View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13054_high_1 (Length: 559)
Name: NF13054_high_1
Description: NF13054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13054_high_1 |
 | |
|
| [»] chr4 (1 HSPs) |
| |
|
| [»] scaffold0690 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 507; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 507; E-Value: 0
Query Start/End: Original strand, 1 - 559
Target Start/End: Complemental strand, 27696545 - 27695987
Alignment:
| Q |
1 |
ttgcaattctagtgtcttcttctccttctatatcaatttttatatcttcgttgttctctagaagattataaatccattgtggatagtgaacatgattgtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27696545 |
ttgcaattctagtgtcttcttctccttctatatcgatttttatatcttcattgttctctagaagattataaatccattgtggatagtgaacatgattgtt |
27696446 |
T |
|
| Q |
101 |
attctcagccgtgacatcggttactttccttcctccaaccatttacagaagcagcatcccataactataagcatctgacttataggatacaacgccaaag |
200 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
27696445 |
attctcatccgtgacatcggttactttccttcctccaaccatttcaagaagcagcatcccataactataaacatctgacttataggatacaatgccaaag |
27696346 |
T |
|
| Q |
201 |
tttctagaaaatacctctggcgcaatgtagcccaaagttcccctagccgtggtcattgacacaatacttctttctttggaacaaagtttggccagaccaa |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
27696345 |
tttctagaaaatacctctggcgcaatgtagcccaaagttcccctagccgtggtcattgacacaatacttctttctttggaacaaagttttgccaaaccaa |
27696246 |
T |
|
| Q |
301 |
aatcggaaattttaggtgtgaaattgtcgtctagcaatacgttatgaggtttgatatcaaaatggagaattcgtttatcacaaccttgatgaagatactc |
400 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27696245 |
aatcagaaattttgggtgtgaaattgtcgtctagcaatacgttatgaggtttgatatcaaaatggagaattcgtttatcacaaccttgatgaagatactc |
27696146 |
T |
|
| Q |
401 |
aattcccttcgctataccaagagaaatgttttgaagcctatcccaacctaaaaagacatccttattgtctgcagatgatatgaaattctgcaacgatcct |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
27696145 |
aattcccttcgctataccaagagaaatgttttgaagcctatcccaacctaaaaagacatccttattgtctgcagatgatatgaaattctgcaacgaacct |
27696046 |
T |
|
| Q |
501 |
tttggtaaaaattcatacaccaaggctcgtttgtttccgtctgcacaaaaaccaaccaa |
559 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
27696045 |
tttggtaaaaattcatacaccaaggctcgtttgtttccatctgcacaaaaaccaaccaa |
27695987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 53; Significance: 4e-21; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 195 - 415
Target Start/End: Complemental strand, 11041232 - 11041012
Alignment:
| Q |
195 |
ccaaagtttctagaaaatacctctggcgcaatgtagcccaaagttcccctagccgtggtcattgacacaatacttctttctttggaacaaagtttggcca |
294 |
Q |
| |
|
|||||||| || ||||| || ||||| |||||||||||||||||||| ||||||| |||||||||||| || || || | ||||| | ||| || | |
|
|
| T |
11041232 |
ccaaagttccttgaaaaaacttctggagcaatgtagcccaaagttcctctagccgcggtcattgacactatgctctgatcccttgaacataatttagcta |
11041133 |
T |
|
| Q |
295 |
gaccaaaatcggaaattttaggtgtgaaattgtcgtctagcaatacgttatgaggtttgatatcaaaatggagaattcgtttatcacaaccttgatgaag |
394 |
Q |
| |
|
|||||||||| | ||||| || | || |||| ||| || || || || || || ||||||||||||||||| || |||| |||||||||||||||||| |
|
|
| T |
11041132 |
gaccaaaatcacatatttttggaataaagttgtggtcaagtaacacattttgtggcttgatatcaaaatggaggatgcgttgatcacaaccttgatgaag |
11041033 |
T |
|
| Q |
395 |
atactcaattcccttcgctat |
415 |
Q |
| |
|
||| |||||||| || ||||| |
|
|
| T |
11041032 |
atattcaattcctttagctat |
11041012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 195 - 433
Target Start/End: Complemental strand, 9364715 - 9364477
Alignment:
| Q |
195 |
ccaaagtttctagaaaatacctctggcgcaatgtagcccaaagttcccctagccgtggtcattgacacaatacttctttctttggaacaaagtttggcca |
294 |
Q |
| |
|
||||||||||| ||||| || || || || |||||||| || |||||| |||| | ||||| || || |||||| | ||| ||||| | ||||||| |
|
|
| T |
9364715 |
ccaaagtttcttgaaaaaacttcaggtgccatgtagcctaatgttcccttagctgcagtcatggatacgatactttgattttttgaacatatcttggcca |
9364616 |
T |
|
| Q |
295 |
gaccaaaatcggaaattttaggtgtgaaattgtcgtctagcaatacgttatgaggtttgatatcaaaatggagaattcgtttatcacaaccttgatgaag |
394 |
Q |
| |
|
||||||||| | |||||| || ||||||||||| |||| ||| || |||||||| ||||| ||||| || ||||||| || |||||||||||| || || |
|
|
| T |
9364615 |
aaccaaaatctgtaattttgggagtgaaattgtcatctaacaagacattatgaggattgatgtcaaagtgtagaattctttgatcacaaccttggtggag |
9364516 |
T |
|
| Q |
395 |
atactcaattcccttcgctataccaagagaaatgttttg |
433 |
Q |
| |
|
||||||||| || || ||||| || |||| ||| ||||| |
|
|
| T |
9364515 |
atactcaataccatttgctatgcctagagcaattttttg |
9364477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 433
Target Start/End: Complemental strand, 9337763 - 9337618
Alignment:
| Q |
288 |
ttggccagaccaaaatcggaaattttaggtgtgaaattgtcgtctagcaatacgttatgaggtttgatatcaaaatggagaattcgtttatcacaacctt |
387 |
Q |
| |
|
||||||| ||||||||| | |||||| || ||||||||||| |||| ||| || |||||||| ||||| ||||| || ||||||| || ||||||||||| |
|
|
| T |
9337763 |
ttggccaaaccaaaatctgtaattttgggagtgaaattgtcatctaacaagacattatgaggattgatgtcaaagtgtagaattctttgatcacaacctt |
9337664 |
T |
|
| Q |
388 |
gatgaagatactcaattcccttcgctataccaagagaaatgttttg |
433 |
Q |
| |
|
| || ||||||||||| || || ||||| || |||| ||| ||||| |
|
|
| T |
9337663 |
ggtggagatactcaataccatttgctatgcctagagcaattttttg |
9337618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 433
Target Start/End: Original strand, 9242329 - 9242567
Alignment:
| Q |
195 |
ccaaagtttctagaaaatacctctggcgcaatgtagcccaaagttcccctagccgtggtcattgacacaatacttctttctttggaacaaagtttggcca |
294 |
Q |
| |
|
||||| ||||||||||| || || || || |||||||| | |||||| |||||| ||||| || ||||||||| | ||| ||||| | ||||||| |
|
|
| T |
9242329 |
ccaaaatttctagaaaaaacttcaggtgccatgtagcctactgttcccttagccgcagtcatggatacaatactttgatttttcgaacacatcttggcca |
9242428 |
T |
|
| Q |
295 |
gaccaaaatcggaaattttaggtgtgaaattgtcgtctagcaatacgttatgaggtttgatatcaaaatggagaattcgtttatcacaaccttgatgaag |
394 |
Q |
| |
|
||||||||| | ||||| || |||||||||| |||| ||| || |||| ||| ||||| ||||| || ||||||| || |||||||||||| || || |
|
|
| T |
9242429 |
aaccaaaatctgtaatttggggaatgaaattgtcatctaacaagacattattaggattgatgtcaaagtgtagaattctttgatcacaaccttggtggag |
9242528 |
T |
|
| Q |
395 |
atactcaattcccttcgctataccaagagaaatgttttg |
433 |
Q |
| |
|
||||||||| || || |||||||| |||| ||| ||||| |
|
|
| T |
9242529 |
atactcaatgccattggctatacctagagcaattttttg |
9242567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 308 - 415
Target Start/End: Original strand, 9466636 - 9466743
Alignment:
| Q |
308 |
aattttaggtgtgaaattgtcgtctagcaatacgttatgaggtttgatatcaaaatggagaattcgtttatcacaaccttgatgaagatactcaattccc |
407 |
Q |
| |
|
|||||| || |||||||| || |||| ||| || |||||||| ||||| ||||| || ||||||| || |||||||||||| ||||||||||||||||| |
|
|
| T |
9466636 |
aattttgggagtgaaattctcatctaacaagacattatgaggattgatgtcaaagtgaagaattctttgatcacaaccttggtgaagatactcaattcca |
9466735 |
T |
|
| Q |
408 |
ttcgctat |
415 |
Q |
| |
|
|| ||||| |
|
|
| T |
9466736 |
ttggctat |
9466743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 159 - 418
Target Start/End: Complemental strand, 10993109 - 10992850
Alignment:
| Q |
159 |
ccataactataagcatctgacttataggatacaacgccaaagtttctagaaaatacctctggcgcaatgtagcccaaagttcccctagccgtggtcattg |
258 |
Q |
| |
|
|||||||||||| ||||||| || || || ||| |||||||| || ||||| || ||||| |||||||| ||||| ||||| ||||| | |||||||| |
|
|
| T |
10993109 |
ccataactataaacatctgatttgtaagacacatttccaaagttccttgaaaaaacttctggagcaatgtaccccaatgttcctctagctgcggtcattg |
10993010 |
T |
|
| Q |
259 |
acacaatacttctttctttggaacaaagtttggccagaccaaaatcggaaattttaggtgtgaaattgtcgtctagcaatacgttatgaggtttgatatc |
358 |
Q |
| |
|
| || | ||| || | ||||| | ||| || |||||||| || || ||||| || |||| || | ||| || || || || || ||||||||||| |
|
|
| T |
10993009 |
aaactacgctttggtcccttgaacataatttagctagaccaaagtcagatatttttggaatgaagttatggtcaagtaacacattttgtggtttgatatc |
10992910 |
T |
|
| Q |
359 |
aaaatggagaattcgtttatcacaaccttgatgaagatactcaattcccttcgctatacc |
418 |
Q |
| |
|
|||||| || || |||| |||||||||||||||||||||||||| ||| || |||||||| |
|
|
| T |
10992909 |
aaaatgaaggatgcgttgatcacaaccttgatgaagatactcaactcctttagctatacc |
10992850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 406
Target Start/End: Complemental strand, 8962622 - 8962411
Alignment:
| Q |
195 |
ccaaagtttctagaaaatacctctggcgcaatgtagcccaaagttcccctagccgtggtcattgacacaatacttctttctttggaacaaagtttggcca |
294 |
Q |
| |
|
|||||||||| ||||||||| || || || ||||| || || ||||||||||||| ||||| || |||||| || | |||||| || | ||||| | |
|
|
| T |
8962622 |
ccaaagtttcgagaaaatacttcaggtgccatgtatcctaatgttcccctagccgcagtcatcgatacaatagtttgatttttggagcacaacttggcta |
8962523 |
T |
|
| Q |
295 |
gaccaaaatcggaaattttaggtgtgaaattgtcgtctagcaatacgttatgaggtttgatatcaaaatggagaattcgtttatcacaaccttgatgaag |
394 |
Q |
| |
|
|||||| || || ||||| || || |||||||| |||| ||| | || || || |||||||||||||| ||||||| || |||||| || || ||||| |
|
|
| T |
8962522 |
aaccaaagtctgatatttttggagtaaaattgtcatctaacaagatattgtgcggattgatatcaaaatgaagaattctttgatcacagccctggtgaag |
8962423 |
T |
|
| Q |
395 |
atactcaattcc |
406 |
Q |
| |
|
|||||||||||| |
|
|
| T |
8962422 |
atactcaattcc |
8962411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 415
Target Start/End: Complemental strand, 9300299 - 9300192
Alignment:
| Q |
308 |
aattttaggtgtgaaattgtcgtctagcaatacgttatgaggtttgatatcaaaatggagaattcgtttatcacaaccttgatgaagatactcaattccc |
407 |
Q |
| |
|
|||||| || || |||||||| || | ||| ||||||||||| ||||| ||||| || ||||||| || |||||||||||| ||||||||||| ||||| |
|
|
| T |
9300299 |
aatttttggggttaaattgtcatcgatcaagacgttatgaggattgatgtcaaagtgaagaattctttgatcacaaccttggtgaagatactctattcca |
9300200 |
T |
|
| Q |
408 |
ttcgctat |
415 |
Q |
| |
|
|| ||||| |
|
|
| T |
9300199 |
ttggctat |
9300192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 415
Target Start/End: Complemental strand, 11026373 - 11026309
Alignment:
| Q |
351 |
ttgatatcaaaatggagaattcgtttatcacaaccttgatgaagatactcaattcccttcgctat |
415 |
Q |
| |
|
|||||||| |||||||| || |||| ||||||||||||||||||||| |||||||| || ||||| |
|
|
| T |
11026373 |
ttgatatcgaaatggaggatgcgttgatcacaaccttgatgaagatattcaattcctttagctat |
11026309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 418
Target Start/End: Complemental strand, 10930905 - 10930646
Alignment:
| Q |
159 |
ccataactataagcatctgacttataggatacaacgccaaagtttctagaaaatacctctggcgcaatgtagcccaaagttcccctagccgtggtcattg |
258 |
Q |
| |
|
|||||||||||| ||||||| || || || ||| |||||||| || || || || ||||| |||||||||||||||||||| ||||| | ||||||| |
|
|
| T |
10930905 |
ccataactataaacatctgatttgtaagacacatttccaaagttccttgagaaaacttctggagcaatgtagcccaaagttcctctagctgctgtcattg |
10930806 |
T |
|
| Q |
259 |
acacaatacttctttctttggaacaaagtttggccagaccaaaatcggaaattttaggtgtgaaattgtcgtctagcaatacgttatgaggtttgatatc |
358 |
Q |
| |
|
|||| || ||| || | ||||| | ||| || |||||||| || || || || || | || || | ||| || || || || || ||||||||||| |
|
|
| T |
10930805 |
acactatgctttggtcccttgaacataatttagctagaccaaagtcagatatctttggaataaagttatggtcaagtaacacattttgtggtttgatatc |
10930706 |
T |
|
| Q |
359 |
aaaatggagaattcgtttatcacaaccttgatgaagatactcaattcccttcgctatacc |
418 |
Q |
| |
|
||||||| || |||| ||||||||||||||||||||||||| ||| || |||||||| |
|
|
| T |
10930705 |
gaaatggacgatgcgttggtcacaaccttgatgaagatactcaactcctttagctatacc |
10930646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 9233954 - 9233896
Alignment:
| Q |
342 |
ttatgaggtttgatatcaaaatggagaattcgtttatcacaaccttgatgaagatactc |
400 |
Q |
| |
|
|||||||| |||||||||||||| |||||| | |||||||||||||||| |||||||| |
|
|
| T |
9233954 |
ttatgaggcttgatatcaaaatgtagaatttgcatatcacaaccttgatgcagatactc |
9233896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 421
Target Start/End: Complemental strand, 9495512 - 9495370
Alignment:
| Q |
279 |
gaacaaagtttggccagaccaaaatcggaaattttaggtgtgaaattgtcgtctagcaatacgttatgaggtttgatatcaaaatggagaattcgtttat |
378 |
Q |
| |
|
|||||||| || |||||||||||||| || || || || ||||| || | ||| || || | ||||||||||| |||||||| || || || | | | |
|
|
| T |
9495512 |
gaacaaagcttagccagaccaaaatcagatatcttgggagtgaagttattgtcaagtaagatattatgaggttttatatcaaagtgaagtatcctctggt |
9495413 |
T |
|
| Q |
379 |
cacaaccttgatgaagatactcaattcccttcgctataccaag |
421 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
9495412 |
cacatccttgatgaagatactcaattcctttcgctattccaag |
9495370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 403
Target Start/End: Complemental strand, 8927145 - 8927061
Alignment:
| Q |
319 |
tgaaattgtcgtctagcaatacgttatgaggtttgatatcaaaatggagaattcgtttatcacaaccttgatgaagatactcaat |
403 |
Q |
| |
|
|||||||||| |||| ||| || || || || ||||||||||| || ||||||| | |||||||||||| |||||||||||||| |
|
|
| T |
8927145 |
tgaaattgtcatctaacaagacattgtggggattgatatcaaagtgaagaattctatgatcacaaccttggtgaagatactcaat |
8927061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 415
Target Start/End: Original strand, 9257394 - 9257518
Alignment:
| Q |
291 |
gccagaccaaaatcggaaattttaggtgtgaaattgtcgtctagcaatacgttatgaggtttgatatcaaaatggagaattcgtttatcacaaccttgat |
390 |
Q |
| |
|
|||| |||||||| | |||||| || || |||||||| || | ||| || |||||||| ||||| ||||| || ||||||| || |||||||| ||| | |
|
|
| T |
9257394 |
gccaaaccaaaatttgtaatttttggggttaaattgtcatcgatcaagacattatgaggattgatgtcaaagtgaagaattctttgatcacaactttggt |
9257493 |
T |
|
| Q |
391 |
gaagatactcaattcccttcgctat |
415 |
Q |
| |
|
|||||||||| ||||| || ||||| |
|
|
| T |
9257494 |
gaagatactcgattccattggctat |
9257518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 394
Target Start/End: Complemental strand, 10906835 - 10906789
Alignment:
| Q |
348 |
ggtttgatatcaaaatggagaattcgtttatcacaaccttgatgaag |
394 |
Q |
| |
|
||||||||||||||||| || || |||| |||||||||||||||||| |
|
|
| T |
10906835 |
ggtttgatatcaaaatgaaggatgcgttgatcacaaccttgatgaag |
10906789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 159 - 259
Target Start/End: Complemental strand, 10907022 - 10906922
Alignment:
| Q |
159 |
ccataactataagcatctgacttataggatacaacgccaaagtttctagaaaatacctctggcgcaatgtagcccaaagttcccctagccgtggtcattg |
258 |
Q |
| |
|
|||||||||||| ||||||| || || || ||| |||||||| || ||||| || ||||| |||||||| ||||| ||||| ||||| | |||||||| |
|
|
| T |
10907022 |
ccataactataaacatctgatttgtaagacacatttccaaagttccttgaaaaaacttctggagcaatgtaccccaatgttcctctagctgcggtcattg |
10906923 |
T |
|
| Q |
259 |
a |
259 |
Q |
| |
|
| |
|
|
| T |
10906922 |
a |
10906922 |
T |
|
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Target: chr3 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 308 - 415
Target Start/End: Complemental strand, 9171708 - 9171601
Alignment:
| Q |
308 |
aattttaggtgtgaaattgtcgtctagcaatacgttatgaggtttgatatcaaaatggagaattcgtttatcacaaccttgatgaagatactcaattccc |
407 |
Q |
| |
|
|||||| || ||||||||||| ||||| || ||||||||||| || || ||||| || ||||||| || |||||||||||| || |||||||||||||| |
|
|
| T |
9171708 |
aatttttggggtgaaattgtcatctagtaagacgttatgaggattaatgtcaaagtgaagaattctttgatcacaaccttggtgcagatactcaattcca |
9171609 |
T |
|
| Q |
408 |
ttcgctat |
415 |
Q |
| |
|
|| ||||| |
|
|
| T |
9171608 |
ttggctat |
9171601 |
T |
|
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Target: scaffold0690 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0690
Description:
Target: scaffold0690; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 195 - 403
Target Start/End: Complemental strand, 1924 - 1716
Alignment:
| Q |
195 |
ccaaagtttctagaaaatacctctggcgcaatgtagcccaaagttcccctagccgtggtcattgacacaatacttctttctttggaacaaagtttggcca |
294 |
Q |
| |
|
||||| ||||||||||| || || || || |||||||| || |||||| |||| || ||||| || ||| ||||| | ||| ||||| | || |||| |
|
|
| T |
1924 |
ccaaaatttctagaaaaaacttcaggtgccatgtagcctaatgttcccttagctgtagtcatggatacattactttgatttttcgaacacatcttagcca |
1825 |
T |
|
| Q |
295 |
gaccaaaatcggaaattttaggtgtgaaattgtcgtctagcaatacgttatgaggtttgatatcaaaatggagaattcgtttatcacaaccttgatgaag |
394 |
Q |
| |
|
||||||||| | ||||| || ||||||||||| |||||||| | |||||||| ||||| ||||| || | ||||| || |||||||||||| || || |
|
|
| T |
1824 |
aaccaaaatctgtgattttgggagtgaaattgtcatctagcaagatattatgaggattgatgtcaaagtgtaaaattctttgatcacaaccttggtggag |
1725 |
T |
|
| Q |
395 |
atactcaat |
403 |
Q |
| |
|
||||||||| |
|
|
| T |
1724 |
atactcaat |
1716 |
T |
|
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Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 403
Target Start/End: Original strand, 15910278 - 15910390
Alignment:
| Q |
291 |
gccagaccaaaatcggaaattttaggtgtgaaattgtcgtctagcaatacgttatgaggtttgatatcaaaatggagaattcgtttatcacaaccttgat |
390 |
Q |
| |
|
|||| ||||||||| | ||||| || ||||||||||| |||||||| | |||||||| ||||| ||||| || | ||||| || |||||||||||| | |
|
|
| T |
15910278 |
gccaaaccaaaatctgtgattttgggagtgaaattgtcatctagcaagatattatgaggattgatgtcaaagtgtaaaattctttgatcacaaccttggt |
15910377 |
T |
|
| Q |
391 |
gaagatactcaat |
403 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
15910378 |
ggagatactcaat |
15910390 |
T |
|
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