View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13055_high_18 (Length: 347)
Name: NF13055_high_18
Description: NF13055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13055_high_18 |
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Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 13 - 329
Target Start/End: Complemental strand, 10369823 - 10369509
Alignment:
| Q |
13 |
aatattatgcaagaatatacctacaatccaaattttaaaattaatacaccactttcaagaaaaggaatctaatatgggctacttcgtagaagacaacaag |
112 |
Q |
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| T |
10369823 |
aatattatgcaagaatatacctacaatccaaattttaaaattaatacaccactttcaagaaaaggaatctaatatgggctacttcgtagaagacaacaag |
10369724 |
T |
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| Q |
113 |
cacaacctccatcgattggaattttctaagcttaatttaatatacacatataaaacaggaaacaagacaaataataataaaatatgaattgcaaaacata |
212 |
Q |
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| T |
10369723 |
cacaacctccatcgattggaattttctaagcttaatttaatatacacatataaaacaggaaataagacaaataataataaaatatgaattgcaaaacata |
10369624 |
T |
|
| Q |
213 |
agacaaaagtaattgctcttcta-catttgtttttgttcatccccattaagaagttcatcttcgtaaattaactcacgttgagaatacacttgcgtgagg |
311 |
Q |
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| T |
10369623 |
agacaaaaataattgcttctctaccatttgtttttgttcatccgcactgagaaatgcatcttcgtaagttaactcacgttaagaatatatctgc---atg |
10369527 |
T |
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| Q |
312 |
agttaactcacgctcaac |
329 |
Q |
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|||||||||||||||||| |
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| T |
10369526 |
agttaactcacgctcaac |
10369509 |
T |
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