View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13056_low_5 (Length: 207)
Name: NF13056_low_5
Description: NF13056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13056_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 35074164 - 35073985
Alignment:
| Q |
13 |
agcaaaggtgaacaacatttaccacattttacactttgaattttatagctggttgattcaatacaataccattcaaaattcaggaatttcaacaaaaaat |
112 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35074164 |
agcaaaggtgaacaacatttaccacattttacactgtgaattttatagctggttgattcaatacaataccattcaaaattcaggaatttcaacaaaaaat |
35074065 |
T |
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| Q |
113 |
aaatcaatgcaccaagccacagcagaacaaattgggaagacaaattatgcaacaaaaattagtggtgccggagtaactac |
192 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35074064 |
aagtcaatgcaccaagccacagcagaacaaattgggaagacaaattatgcaacaaaaattagtggtgccggagtaactac |
35073985 |
T |
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