View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13057_low_4 (Length: 280)
Name: NF13057_low_4
Description: NF13057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13057_low_4 |
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Alignment Details
Target: chr3 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 74 - 265
Target Start/End: Complemental strand, 48326567 - 48326380
Alignment:
| Q |
74 |
ctcactggtagaagaatgagcttagcaccctttgcagcagcgtcttgaatagcagtgcgtgcgtgggcgatgtttttgtccttatcggaggtgactgaga |
173 |
Q |
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| T |
48326567 |
ctcactggtagaagaatgagcttagcaccctttgcagcagcgtcttgaatagcagtgcgtgcgtgggcgatgtttttgtccttatcggaggtgactgaga |
48326468 |
T |
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| Q |
174 |
gttgacagagaccaatcttgaactgaaatgaaagaaagaaaagaacatgaggagagagaataattacattttaagtgtagcatcaaaggtgt |
265 |
Q |
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| T |
48326467 |
gttgacagagaccaatcttgaactgaaatgaaa----gaaaagaagatgaggagagagaataattacattttaagggtagcatcaaaggtgt |
48326380 |
T |
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