View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13059_high_13 (Length: 434)

Name: NF13059_high_13
Description: NF13059
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13059_high_13
NF13059_high_13
[»] chr8 (32 HSPs)
chr8 (12-423)||(41474861-41475260)
chr8 (24-93)||(14956424-14956493)
chr8 (24-139)||(26215378-26215493)
chr8 (24-125)||(34236044-34236146)
chr8 (62-139)||(37444488-37444565)
chr8 (71-139)||(3537104-3537172)
chr8 (46-139)||(16210959-16211052)
chr8 (163-252)||(4560567-4560652)
chr8 (26-122)||(9956902-9956998)
chr8 (151-189)||(32840964-32841002)
chr8 (24-124)||(900784-900885)
chr8 (46-115)||(8216784-8216853)
chr8 (25-126)||(8407293-8407394)
chr8 (70-139)||(10114418-10114486)
chr8 (71-139)||(14280474-14280542)
chr8 (213-257)||(38602438-38602482)
chr8 (73-129)||(42597332-42597388)
chr8 (81-151)||(2364533-2364604)
chr8 (219-254)||(3092542-3092577)
chr8 (68-139)||(3936775-3936846)
chr8 (68-111)||(27492885-27492928)
chr8 (62-113)||(31916535-31916586)
chr8 (172-255)||(778463-778542)
chr8 (207-253)||(3112228-3112274)
chr8 (24-129)||(37353332-37353437)
chr8 (68-117)||(40859813-40859862)
chr8 (163-207)||(779022-779066)
chr8 (213-253)||(1096601-1096641)
chr8 (72-128)||(21653011-21653067)
chr8 (207-255)||(26479890-26479938)
chr8 (213-257)||(30251369-30251413)
chr8 (213-257)||(43717849-43717893)
[»] chr4 (39 HSPs)
chr4 (25-129)||(3155486-3155590)
chr4 (24-109)||(44863065-44863150)
chr4 (24-129)||(50662815-50662920)
chr4 (24-93)||(43505830-43505897)
chr4 (25-138)||(44138442-44138555)
chr4 (80-139)||(437505-437565)
chr4 (72-133)||(6364079-6364140)
chr4 (29-93)||(3070102-3070166)
chr4 (70-137)||(49004047-49004112)
chr4 (62-125)||(2733240-2733303)
chr4 (68-135)||(26520306-26520373)
chr4 (70-129)||(51630039-51630098)
chr4 (72-138)||(7601689-7601755)
chr4 (78-135)||(25885795-25885852)
chr4 (213-257)||(42403938-42403982)
chr4 (151-251)||(52315118-52315213)
chr4 (155-255)||(55437134-55437229)
chr4 (29-107)||(14194486-14194565)
chr4 (68-127)||(23503485-23503544)
chr4 (80-139)||(27043903-27043962)
chr4 (24-128)||(44797764-44797872)
chr4 (24-71)||(47119086-47119133)
chr4 (24-86)||(17204010-17204072)
chr4 (68-114)||(21731751-21731797)
chr4 (72-129)||(40174495-40174550)
chr4 (24-124)||(2987070-2987171)
chr4 (87-128)||(25904294-25904335)
chr4 (213-254)||(27043748-27043789)
chr4 (70-139)||(30066839-30066908)
chr4 (213-254)||(38336815-38336856)
chr4 (24-93)||(50681218-50681287)
chr4 (228-257)||(54581068-54581097)
chr4 (85-129)||(3175894-3175938)
chr4 (84-128)||(14011176-14011220)
chr4 (213-257)||(17822780-17822824)
chr4 (83-139)||(17884009-17884065)
chr4 (81-117)||(21193937-21193973)
chr4 (221-253)||(23582384-23582416)
chr4 (153-205)||(49939913-49939965)
[»] scaffold0024 (2 HSPs)
scaffold0024 (69-139)||(21351-21421)
scaffold0024 (62-139)||(58857-58934)
[»] chr2 (48 HSPs)
chr2 (24-136)||(26143717-26143828)
chr2 (24-115)||(9174696-9174787)
chr2 (24-114)||(19608723-19608813)
chr2 (68-138)||(42420368-42420438)
chr2 (24-129)||(43570298-43570401)
chr2 (68-127)||(4026743-4026802)
chr2 (27-93)||(11863806-11863872)
chr2 (25-139)||(26626759-26626870)
chr2 (24-129)||(2416195-2416300)
chr2 (65-138)||(3611149-3611222)
chr2 (28-93)||(32592463-32592528)
chr2 (68-129)||(39567829-39567890)
chr2 (24-93)||(41407173-41407242)
chr2 (68-129)||(42457874-42457935)
chr2 (24-108)||(40682477-40682561)
chr2 (151-257)||(7928213-7928315)
chr2 (166-254)||(8017502-8017586)
chr2 (70-137)||(23747232-23747299)
chr2 (24-91)||(39659639-39659706)
chr2 (207-257)||(1830144-1830194)
chr2 (25-79)||(27695730-27695784)
chr2 (207-257)||(40759265-40759315)
chr2 (163-254)||(44606028-44606115)
chr2 (164-257)||(26202095-26202183)
chr2 (24-93)||(42659280-42659349)
chr2 (213-257)||(15305785-15305829)
chr2 (63-139)||(32364797-32364873)
chr2 (24-139)||(9395012-9395127)
chr2 (214-249)||(9530646-9530681)
chr2 (80-139)||(18962111-18962170)
chr2 (84-139)||(35459852-35459907)
chr2 (68-139)||(36114596-36114667)
chr2 (81-139)||(11863723-11863781)
chr2 (227-257)||(15370238-15370268)
chr2 (207-253)||(22878203-22878249)
chr2 (69-135)||(42907286-42907352)
chr2 (80-117)||(3102631-3102668)
chr2 (71-116)||(7928390-7928435)
chr2 (160-189)||(16451181-16451210)
chr2 (227-256)||(27317504-27317533)
chr2 (68-129)||(36114345-36114406)
chr2 (61-139)||(44600458-44600538)
chr2 (153-205)||(750726-750778)
chr2 (81-117)||(5045252-5045288)
chr2 (81-125)||(5998789-5998833)
chr2 (229-257)||(28810367-28810395)
chr2 (153-189)||(43570469-43570505)
chr2 (80-124)||(44119722-44119766)
[»] chr5 (52 HSPs)
chr5 (29-139)||(465841-465951)
chr5 (24-122)||(28776857-28776955)
chr5 (25-110)||(34736628-34736713)
chr5 (24-139)||(9202821-9202936)
chr5 (26-129)||(19460469-19460572)
chr5 (24-89)||(32372496-32372561)
chr5 (68-139)||(7674574-7674645)
chr5 (68-139)||(12425497-12425568)
chr5 (68-129)||(4014507-4014568)
chr5 (34-139)||(39105356-39105461)
chr5 (68-139)||(42569053-42569124)
chr5 (73-127)||(706394-706448)
chr5 (57-127)||(3566403-3566473)
chr5 (30-135)||(11835164-11835270)
chr5 (83-129)||(14932231-14932277)
chr5 (25-129)||(36797171-36797273)
chr5 (75-140)||(37112330-37112395)
chr5 (80-129)||(39128577-39128626)
chr5 (24-76)||(3520303-3520355)
chr5 (73-129)||(4855629-4855685)
chr5 (24-102)||(6096428-6096503)
chr5 (217-257)||(35299880-35299920)
chr5 (27-129)||(5963365-5963468)
chr5 (207-254)||(10791099-10791146)
chr5 (87-138)||(35446000-35446051)
chr5 (24-79)||(40426634-40426689)
chr5 (72-123)||(40590457-40590508)
chr5 (72-126)||(1465105-1465159)
chr5 (226-256)||(11707167-11707197)
chr5 (24-90)||(12857837-12857903)
chr5 (87-129)||(29925786-29925828)
chr5 (80-138)||(39919720-39919778)
chr5 (87-129)||(42500308-42500350)
chr5 (24-93)||(7319140-7319209)
chr5 (86-139)||(11615452-11615505)
chr5 (212-253)||(11835386-11835427)
chr5 (24-77)||(13697904-13697957)
chr5 (24-77)||(24030547-24030600)
chr5 (24-93)||(26005367-26005436)
chr5 (75-124)||(32022004-32022053)
chr5 (70-139)||(34112803-34112872)
chr5 (80-129)||(40864660-40864709)
chr5 (160-189)||(41535444-41535473)
chr5 (24-117)||(42099956-42100047)
chr5 (24-127)||(6593181-6593285)
chr5 (86-157)||(7853602-7853674)
chr5 (153-189)||(7853696-7853732)
chr5 (32-112)||(7984868-7984948)
chr5 (24-60)||(12433532-12433568)
chr5 (24-88)||(16938001-16938065)
chr5 (214-254)||(34205353-34205393)
chr5 (24-116)||(40848639-40848731)
[»] chr1 (49 HSPs)
chr1 (24-117)||(45975572-45975665)
chr1 (24-110)||(1829056-1829142)
chr1 (24-129)||(30581684-30581789)
chr1 (62-139)||(37841918-37841995)
chr1 (57-127)||(9656561-9656635)
chr1 (68-139)||(38116261-38116329)
chr1 (24-139)||(47498909-47499031)
chr1 (24-95)||(14331661-14331732)
chr1 (68-127)||(46252767-46252826)
chr1 (68-139)||(51190787-51190858)
chr1 (68-138)||(8852786-8852856)
chr1 (73-139)||(36070181-36070247)
chr1 (140-189)||(5894157-5894206)
chr1 (24-93)||(37473271-37473340)
chr1 (82-139)||(37842428-37842485)
chr1 (24-93)||(38247326-38247394)
chr1 (81-138)||(45145165-45145222)
chr1 (73-129)||(1432446-1432502)
chr1 (68-128)||(9572192-9572252)
chr1 (71-139)||(41163077-41163145)
chr1 (80-127)||(3887717-3887764)
chr1 (80-139)||(7028230-7028289)
chr1 (57-139)||(15784250-15784333)
chr1 (68-139)||(23544713-23544784)
chr1 (24-127)||(27146333-27146436)
chr1 (207-254)||(33976283-33976330)
chr1 (26-139)||(836412-836519)
chr1 (43-140)||(3495707-3495804)
chr1 (153-195)||(3887604-3887646)
chr1 (73-123)||(4700155-4700205)
chr1 (24-94)||(5894281-5894351)
chr1 (151-205)||(27145698-27145752)
chr1 (81-139)||(36151578-36151636)
chr1 (24-66)||(46423152-46423194)
chr1 (87-129)||(47432041-47432083)
chr1 (80-129)||(289178-289227)
chr1 (24-93)||(1510438-1510507)
chr1 (80-129)||(4549804-4549853)
chr1 (28-93)||(14576782-14576847)
chr1 (24-89)||(17830026-17830091)
chr1 (84-129)||(18556869-18556914)
chr1 (24-93)||(44932061-44932130)
chr1 (24-92)||(3234153-3234221)
chr1 (209-253)||(6292599-6292643)
chr1 (71-115)||(7069229-7069273)
chr1 (226-254)||(11695986-11696014)
chr1 (163-195)||(18327119-18327151)
chr1 (75-139)||(34952148-34952212)
chr1 (83-139)||(45990131-45990187)
[»] chr7 (33 HSPs)
chr7 (24-116)||(46139824-46139916)
chr7 (24-129)||(20881719-20881824)
chr7 (24-117)||(33672960-33673053)
chr7 (26-94)||(33552939-33553007)
chr7 (28-94)||(32714307-32714374)
chr7 (151-254)||(34035971-34036069)
chr7 (208-254)||(7644225-7644271)
chr7 (81-139)||(28613607-28613665)
chr7 (63-129)||(40009391-40009457)
chr7 (167-257)||(4970707-4970792)
chr7 (24-93)||(9210500-9210569)
chr7 (24-77)||(18865195-18865248)
chr7 (70-111)||(19214492-19214533)
chr7 (25-86)||(28900760-28900821)
chr7 (24-93)||(33128629-33128698)
chr7 (24-77)||(36517487-36517540)
chr7 (24-93)||(46078019-46078088)
chr7 (100-139)||(30180009-30180048)
chr7 (24-91)||(38138610-38138677)
chr7 (24-139)||(47177518-47177633)
chr7 (81-139)||(30133988-30134046)
chr7 (227-257)||(33128876-33128906)
chr7 (73-158)||(42656446-42656532)
chr7 (87-129)||(45004711-45004753)
chr7 (87-129)||(45806409-45806451)
chr7 (163-192)||(15740387-15740416)
chr7 (24-93)||(21568757-21568826)
chr7 (84-129)||(43152985-43153030)
chr7 (24-109)||(47795839-47795924)
chr7 (77-129)||(3968278-3968330)
chr7 (151-187)||(7241316-7241352)
chr7 (30-94)||(21619295-21619359)
chr7 (153-189)||(25635553-25635589)
[»] chr6 (27 HSPs)
chr6 (63-139)||(9093629-9093705)
chr6 (25-92)||(847941-848008)
chr6 (28-129)||(33117435-33117529)
chr6 (30-127)||(430461-430559)
chr6 (70-127)||(24476530-24476587)
chr6 (72-136)||(9559617-9559681)
chr6 (24-116)||(23063624-23063716)
chr6 (24-135)||(264253-264364)
chr6 (80-139)||(29274302-29274361)
chr6 (24-93)||(6538389-6538458)
chr6 (24-108)||(35069434-35069518)
chr6 (62-129)||(4163095-4163162)
chr6 (62-129)||(4224716-4224783)
chr6 (87-138)||(8147647-8147698)
chr6 (206-253)||(29249497-29249544)
chr6 (80-119)||(33416323-33416362)
chr6 (62-137)||(33736758-33736833)
chr6 (81-139)||(20671938-20671996)
chr6 (81-139)||(24836272-24836330)
chr6 (215-257)||(28088138-28088180)
chr6 (227-256)||(103555-103584)
chr6 (80-156)||(507158-507235)
chr6 (163-192)||(1575960-1575989)
chr6 (71-116)||(8844749-8844794)
chr6 (160-189)||(9559517-9559546)
chr6 (213-254)||(21405072-21405113)
chr6 (209-257)||(30536880-30536928)
[»] chr3 (50 HSPs)
chr3 (33-91)||(39980610-39980668)
chr3 (24-117)||(8142805-8142898)
chr3 (24-124)||(34235164-34235264)
chr3 (24-139)||(35328237-35328350)
chr3 (26-139)||(25447317-25447430)
chr3 (24-93)||(26990609-26990678)
chr3 (29-93)||(28795961-28796025)
chr3 (73-129)||(44061106-44061162)
chr3 (24-79)||(24085458-24085513)
chr3 (61-139)||(34638037-34638116)
chr3 (24-83)||(47132249-47132308)
chr3 (213-255)||(9832672-9832714)
chr3 (33-91)||(39979328-39979386)
chr3 (24-93)||(1508710-1508779)
chr3 (24-93)||(35959585-35959654)
chr3 (36-93)||(46778356-46778413)
chr3 (81-129)||(2128334-2128382)
chr3 (83-139)||(42809242-42809298)
chr3 (163-256)||(45541636-45541725)
chr3 (32-139)||(402615-402721)
chr3 (87-138)||(30956700-30956751)
chr3 (87-138)||(30972512-30972563)
chr3 (68-139)||(31403284-31403355)
chr3 (84-138)||(14145854-14145908)
chr3 (213-255)||(16072958-16073000)
chr3 (24-124)||(30574002-30574101)
chr3 (27-93)||(31365401-31365467)
chr3 (24-126)||(44747489-44747590)
chr3 (151-189)||(46778169-46778207)
chr3 (62-124)||(49465751-49465813)
chr3 (227-257)||(51929866-51929896)
chr3 (44-114)||(52597591-52597660)
chr3 (24-65)||(849554-849595)
chr3 (24-93)||(2719341-2719410)
chr3 (208-253)||(2923584-2923629)
chr3 (153-190)||(5436128-5436165)
chr3 (29-114)||(28240213-28240298)
chr3 (36-93)||(29520607-29520664)
chr3 (24-93)||(30956755-30956824)
chr3 (24-93)||(30972567-30972636)
chr3 (24-85)||(34034043-34034104)
chr3 (160-189)||(37389246-37389275)
chr3 (68-125)||(46030914-46030971)
chr3 (96-129)||(49034346-49034379)
chr3 (87-139)||(15304420-15304472)
chr3 (71-123)||(23808140-23808192)
chr3 (81-117)||(30669065-30669101)
chr3 (68-116)||(32582261-32582309)
chr3 (218-254)||(35625020-35625056)
chr3 (227-255)||(49845457-49845485)
[»] scaffold0050 (1 HSPs)
scaffold0050 (24-88)||(58476-58540)
[»] scaffold0018 (1 HSPs)
scaffold0018 (24-76)||(157979-158031)


Alignment Details
Target: chr8 (Bit Score: 359; Significance: 0; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 12 - 423
Target Start/End: Complemental strand, 41475260 - 41474861
Alignment:
Q  12 tactaaggtttagtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41475260 tactaaggtttagtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagat 41475161  T
Q  112 aaaatacagttaaattgtgttcgtataactatcttagagaacttatgtacaatgtcataagttgttttcataagttcttgcaaagaatctcacatacaag 211  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||    
T  41475160 aaaatacagttaaattgttttcgtataactatcttagagaacttatgtacaatgtcataagttgttttcataagttctt------------acatacaag 41475073  T
Q  212 tacttatgtcaatcaataagctcaaataagtcaatccaaacaggccgaatcctagcaattcacgaagatgaagatgaaaatgcatactgcaatacagagg 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  41475072 tacttatgtcaatcaataagctcaaataagtcaatccaaacaggccgaatcctagcaattcacgaagatgaagatgaacatgcatattgcaatacagagg 41474973  T
Q  312 gtatatgattgtgtacctgtcaatgataataagcatagcctgatgggtggagagagaagaggaacgcatatctcgaacaatggaccaagcagtgtgaaac 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41474972 gtatatgattgtgtacctgtcaatgataataagcatagcctgatgggtggagagagaagaggaacgcatatctcgaacaatggaccaagcagtgtgaaac 41474873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 14956493 - 14956424
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    |||||||||||||||||||||||| ||||||  |||| | ||| ||||||||||||||||||||||||||    
T  14956493 gtttggataaacaacttatttgcagcttatagcacaatcgcttatcatgataagcacttatgtataagct 14956424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 26215378 - 26215493
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtta 123  Q
    ||||| ||||||||||||||| || ||||||  || | | ||| | ||||||||| ||||||||||||||| || |||| |||||||||||||| |||||    
T  26215378 gtttgtataaacaacttattttcagcttatagcacgagcgcttataatgataagcgcttatgtataagctatttctataacaaaagataaaataaagtta 26215477  T
Q  124 aattgtgttcgtataa 139  Q
    || | | |||||||||    
T  26215478 aactattttcgtataa 26215493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 34236044 - 34236146
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagc-aaaagataaaatacagtt 122  Q
    |||||||||||||||||||||||| ||||||| ||||||  || ||||||||||| |||||| |||||| | || || | | ||||||||||||| ||||    
T  34236044 gtttggataaacaacttatttgcagcttataacacaaacggttatcatgataagcccttatggataagcaatttctacaacaaaaagataaaataaagtt 34236143  T
Q  123 aaa 125  Q
    |||    
T  34236144 aaa 34236146  T

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Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 37444565 - 37444488
Alignment:
Q  62 cacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||| ||||||||||| ||||||||||||||| |  |||| ||||||||||| || ||||||||||| |||||||||    
T  37444565 cacttatcatgataagcgcttatgtataagctattactataacaaaagataaagtaaagttaaattgttttcgtataa 37444488  T

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Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 3537172 - 3537104
Alignment:
Q  71 tgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||||||||||| ||||||||| | || ||||||||||||||||||| ||| ||||||| |||||||||    
T  3537172 tgataagcacttttgtataagcaatttctatagcaaaagataaaataaagtcaaattgttttcgtataa 3537104  T

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Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 139
Target Start/End: Complemental strand, 16211052 - 16210959
Alignment:
Q  46 caacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||||||||  |||| ||||| |||||||| ||||| |||||||||||| || ||||| ||| ||||||||| ||||| ||||| ||| |||||    
T  16211052 caacttatagcacaagcacttatcatgatacgcactcatgtataagctatttctatagtaaatgataaaataaagttacattgttttcatataa 16210959  T

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Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 4560567 - 4560652
Alignment:
Q  163 atgtcataagttgttttcataagttcttgcaaagaatctcacatacaagtacttatgtcaatcaataagctcaaataagtcaatccaaac 252  Q
    |||| ||||||| ||| ||||||||||| |||| || ||||||    ||| |||||||||||  ||||||||||||||||||||||||||    
T  4560567 atgttataagttatttccataagttcttccaaacaacctcaca----agtgcttatgtcaatagataagctcaaataagtcaatccaaac 4560652  T

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Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 9956998 - 9956902
Alignment:
Q  26 ttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtt 122  Q
    |||||||||||||||||||| | ||||||  |||| ||||| ||||||||  | ||||||| | ||||| || |||| |||||||||||||| ||||    
T  9956998 ttggataaacaacttatttgtagcttatagcacaagcacttatcatgatacacgcttatgtttgagctatttctataacaaaagataaaataaagtt 9956902  T

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Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 32841002 - 32840964
Alignment:
Q  151 aacttatgtacaatgtcataagttgttttcataagttct 189  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  32841002 aacttatgaacaatgtcataagttgttttcataagttct 32840964  T

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Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 900885 - 900784
Alignment:
Q  24 gtttggataaacaact-tatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtt 122  Q
    |||||||||||||||| |||||||| ||||||  |||||| ||| ||||||||| |||||||||| |||  | || | |||  |||||||||||| ||||    
T  900885 gtttggataaacaactatatttgcatcttatagcacaaacgcttatcatgataaacacttatgtaaaagtcatttgtgtagtgaaagataaaataaagtt 900786  T
Q  123 aa 124  Q
    ||    
T  900785 aa 900784  T

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Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 115
Target Start/End: Original strand, 8216784 - 8216853
Alignment:
Q  46 caacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaa 115  Q
    |||||||||  | |||||||| ||||||||| ||||||||||||||| | || |||| ||||||||||||    
T  8216784 caacttatagcataaacacttatcatgataaacacttatgtataagccatttatataacaaaagataaaa 8216853  T

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Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 8407293 - 8407394
Alignment:
Q  25 tttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaa 124  Q
    |||||||||||||||||||| || |||| |  ||||||| || |||||||| || |||| |||||||  | || |||  |||||||||||||| ||||||    
T  8407293 tttggataaacaacttattttcagcttaaagcacaaacaattatcatgatatgcgcttacgtataagtcatttctatgccaaaagataaaataaagttaa 8407392  T
Q  125 at 126  Q
    ||    
T  8407393 at 8407394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 10114418 - 10114486
Alignment:
Q  70 atgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||||  ||||||||||||||| || ||||||||||||||||||| |||| |||||| || ||||||    
T  10114418 atgataagtgcttatgtataagctatttctatagcaaaagataaaata-agttgaattgttttggtataa 10114486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 14280542 - 14280474
Alignment:
Q  71 tgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||||||| ||||||||||| ||| || ||||||||||||||||||  | ||||||||| ||| |||||    
T  14280542 tgataagcgcttatgtataacctatttctatagcaaaagataaaattaaattaaattgttttcatataa 14280474  T

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Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 38602438 - 38602482
Alignment:
Q  213 acttatgtcaatcaataagctcaaataagtcaatccaaacaggcc 257  Q
    |||||||||| |  |||||||||||||||||||||||||||||||    
T  38602438 acttatgtcagtagataagctcaaataagtcaatccaaacaggcc 38602482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 42597332 - 42597388
Alignment:
Q  73 ataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    ||||| |||||||||||||||| || |||| |||||||||||||| ||| |||||||    
T  42597332 ataagtacttatgtataagctatttctataacaaaagataaaataaagtaaaattgt 42597388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 2364604 - 2364533
Alignment:
Q  81 ttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa-ctatcttagaga 151  Q
    ||||||||| |||| |||||||||||||||||||||| ||| |||||   || |||||| ||||||||||||    
T  2364604 ttatgtatacgctatttttatagcaaaagataaaataaagtcaaatttcttttgtataagctatcttagaga 2364533  T

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Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 3092577 - 3092542
Alignment:
Q  219 gtcaatcaataagctcaaataagtcaatccaaacag 254  Q
    |||||| |||||||||||||||||||||||||||||    
T  3092577 gtcaataaataagctcaaataagtcaatccaaacag 3092542  T

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Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 3936775 - 3936846
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||||||| |||||||||||||| ||| || |||| |||| ||||||||| || |||||||| ||| |||||    
T  3936775 tcatgataggcacttatgtataatctatttctataacaaaggataaaataaagctaaattgtcttcctataa 3936846  T

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Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 27492885 - 27492928
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagat 111  Q
    |||||||||||||||||||||||| || || |||||||||||||    
T  27492885 tcatgataagcacttatgtataaggtatttctatagcaaaagat 27492928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 31916535 - 31916586
Alignment:
Q  62 cacttgtcatgataagcacttatgtataagctaattttatagcaaaagataa 113  Q
    ||||| ||||||||||| |||||||||||||| ||| |||| ||||||||||    
T  31916535 cacttatcatgataagcgcttatgtataagcttattctataacaaaagataa 31916586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 255
Target Start/End: Original strand, 778463 - 778542
Alignment:
Q  172 gttgttttcataagttcttgcaaagaatctcacatacaagtacttatgtcaatcaataagctcaaataagtcaatccaaacagg 255  Q
    |||||||||||||||||||||||| | ||||    |||||| ||||| ||| | ||||||  |||||||||||| |||||||||    
T  778463 gttgttttcataagttcttgcaaacagtctc----acaagtgcttatttcagtaaataagtacaaataagtcaaaccaaacagg 778542  T

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Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 3112228 - 3112274
Alignment:
Q  207 acaagtacttatgtcaatcaataagctcaaataagtcaatccaaaca 253  Q
    |||||| ||||||||||| |||||||| | |||||||||||||||||    
T  3112228 acaagtgcttatgtcaataaataagcttacataagtcaatccaaaca 3112274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 37353437 - 37353332
Alignment:
Q  24 gtttggataaacaactt-atttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtt 122  Q
    ||||||||||||||||| ||||||| ||||||  | |||  ||| | ||||||||| |||||||| || ||| || |||| |||||||| ||||| ||||    
T  37353437 gtttggataaacaacttgatttgcagcttatagcataaatgcttatgatgataagcgcttatgtacaaactatttctataacaaaagat-aaataaagtt 37353339  T
Q  123 aaattgt 129  Q
    |||||||    
T  37353338 aaattgt 37353332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 40859862 - 40859813
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaata 117  Q
    ||||||||||| ||||||||||||||| |||| ||||  |||||||||||    
T  40859862 tcatgataagcgcttatgtataagctatttttgtagcgtaagataaaata 40859813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 779066 - 779022
Alignment:
Q  163 atgtcataagttgttttcataagttcttgcaaagaatctcacata 207  Q
    |||||||||||||||||| ||||||||| |||| |||||| ||||    
T  779066 atgtcataagttgttttcgtaagttctttcaaacaatctcgcata 779022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 1096601 - 1096641
Alignment:
Q  213 acttatgtcaatcaataagctcaaataagtcaatccaaaca 253  Q
    |||||||||| | ||||| ||||||||||||||||||||||    
T  1096601 acttatgtcactaaataaactcaaataagtcaatccaaaca 1096641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 21653011 - 21653067
Alignment:
Q  72 gataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattg 128  Q
    ||||||| |||||||||| |||| || | || |||||||||||||| ||||||||||    
T  21653011 gataagcgcttatgtataggctatttatgtaacaaaagataaaataaagttaaattg 21653067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 26479890 - 26479938
Alignment:
Q  207 acaagtacttatgtcaatcaataagctcaaataagtcaatccaaacagg 255  Q
    |||||| ||| |||||||  ||||||| |||||||||||||||||||||    
T  26479890 acaagtccttgtgtcaatagataagcttaaataagtcaatccaaacagg 26479938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 30251413 - 30251369
Alignment:
Q  213 acttatgtcaatcaataagctcaaataagtcaatccaaacaggcc 257  Q
    |||||||||| |  ||||||||||||||| |||||||||||||||    
T  30251413 acttatgtcagtagataagctcaaataagccaatccaaacaggcc 30251369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 43717893 - 43717849
Alignment:
Q  213 acttatgtcaatcaataagctcaaataagtcaatccaaacaggcc 257  Q
    ||||||||||||  ||||||||||||||| ||||||||| |||||    
T  43717893 acttatgtcaatagataagctcaaataagccaatccaaataggcc 43717849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 129
Target Start/End: Original strand, 3155486 - 3155590
Alignment:
Q  25 tttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaa 124  Q
    |||||||||||||||||| |||| ||||||  |||| | ||| ||||||||||||  ||||||||||||| || ||||||||||||||||||| ||||||    
T  3155486 tttggataaacaacttatctgcagcttatagtacaagcgcttatcatgataagcatgtatgtataagctatttctatagcaaaagataaaataaagttaa 3155585  T
Q  125 attgt 129  Q
    |||||    
T  3155586 attgt 3155590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 44863150 - 44863065
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaag 109  Q
    |||||||||||||||||||||||| ||||||  |||| ||||||||||||||||  |||||| |||||||| |||||||| |||||    
T  44863150 gtttggataaacaacttatttgcagcttatagcacaagcacttgtcatgataagtgcttatgcataagctatttttatagaaaaag 44863065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 50662920 - 50662815
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtta 123  Q
    |||||||||||||||||||||||| ||||||  ||||   ||| ||||||| |||  |||||||||||||| |||||||||| |||||||||||  ||||    
T  50662920 gtttggataaacaacttatttgcagcttatatcacaagagcttatcatgatgagcgtttatgtataagctatttttatagcataagataaaataatgtta 50662821  T
Q  124 aattgt 129  Q
    ||||||    
T  50662820 aattgt 50662815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 43505830 - 43505897
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    |||||||||||||||||||||||||||||||  |||||| |   ||||||||||||||||||||||||||    
T  43505830 gtttggataaacaacttatttgcaacttatagcacaaacgc--atcatgataagcacttatgtataagct 43505897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 138
Target Start/End: Original strand, 44138442 - 44138555
Alignment:
Q  25 tttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaa 124  Q
    |||||||||||| |||||||||| ||| ||  |||| ||||| ||||||||    ||||||||||||||  || ||||||| ||||||||||| ||||||    
T  44138442 tttggataaacagcttatttgcagcttttagtacaagcacttatcatgatacttgcttatgtataagctgtttctatagcagaagataaaataaagttaa 44138541  T
Q  125 attgtgttcgtata 138  Q
    ||||  ||||||||    
T  44138542 attgctttcgtata 44138555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 437565 - 437505
Alignment:
Q  80 cttatgtataagctaatttt-atagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||||||||| |||||    
T  437565 cttatgtataagctattttttatagcaaaagataaaataaagttaaattgtgttcatataa 437505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 6364079 - 6364140
Alignment:
Q  72 gataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttc 133  Q
    ||||||||||||||||||||||| || |||| |||||||||||||| ||| ||||| |||||    
T  6364079 gataagcacttatgtataagctatttctataacaaaagataaaataaagtgaaattctgttc 6364140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 3070166 - 3070102
Alignment:
Q  29 gataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    |||||||||||||||| ||||||| || ||| |||||||||||||||| |||| || ||||||||    
T  3070166 gataaacaacttatttacaacttacaacacatacacttgtcatgataaacactcatatataagct 3070102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 49004112 - 49004047
Alignment:
Q  70 atgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtat 137  Q
    ||||||||| ||||||||||||| | || ||||||||||||||||||  ||||||||||| |||||||    
T  49004112 atgataagcgcttatgtataagcaatttctatagcaaaagataaaat--agttaaattgttttcgtat 49004047  T

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Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 2733240 - 2733303
Alignment:
Q  62 cacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaa 125  Q
    |||||||||||||| |||||||||||||||| | ||||||   ||||||||||||| |||||||    
T  2733240 cacttgtcatgatatgcacttatgtataagcaatttttatgaaaaaagataaaataaagttaaa 2733303  T

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Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 26520373 - 26520306
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgt 135  Q
    ||||||||||||||||||||||| ||  || |||| |||||||| ||||| ||||||||||| |||||    
T  26520373 tcatgataagcacttatgtataaactgtttctataacaaaagatgaaataaagttaaattgttttcgt 26520306  T

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Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 51630039 - 51630098
Alignment:
Q  70 atgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    ||||||||||||| |||  |||||| || ||||||||||||||||||| |||||||||||    
T  51630039 atgataagcacttgtgttcaagctatttatatagcaaaagataaaataaagttaaattgt 51630098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 7601689 - 7601755
Alignment:
Q  72 gataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtata 138  Q
    ||||||| ||||||||||||||| |  ||||||||| ||||||||| ||||||||||| || |||||    
T  7601689 gataagcgcttatgtataagctattcctatagcaaaggataaaataaagttaaattgtttttgtata 7601755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 135
Target Start/End: Original strand, 25885795 - 25885852
Alignment:
Q  78 cacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgt 135  Q
    ||||||||||| ||||  || ||||||||||||||||||| ||||||||||| |||||    
T  25885795 cacttatgtattagctctttctatagcaaaagataaaataaagttaaattgttttcgt 25885852  T

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Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 42403982 - 42403938
Alignment:
Q  213 acttatgtcaatcaataagctcaaataagtcaatccaaacaggcc 257  Q
    |||||||||| |  |||||||||||||||||||||||||||||||    
T  42403982 acttatgtcagttgataagctcaaataagtcaatccaaacaggcc 42403938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 52315213 - 52315118
Alignment:
Q  151 aacttatgtacaatgtcataagttgttttcataagttcttgcaaagaatctcacatacaagtacttatgtcaatcaataagctcaaataagtcaatccaa 250  Q
    |||||||| | ||||| |||||||||||| |||||||||| |||| ||||||||| |     ||||| |||| |  |||| |||||||||||||||||||    
T  52315213 aacttatgaataatgtgataagttgttttgataagttcttccaaacaatctcacaaa-----acttacgtcagtagataaactcaaataagtcaatccaa 52315119  T

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Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 55437134 - 55437229
Alignment:
Q  155 tatgtacaatgtcataagttgttttcataagttcttgcaaagaatctcacatacaagtacttatgtcaatcaataagctcaaataagtcaatccaaacag 254  Q
    |||| |||| |||||||||||||||||||||||||| |||| ||| ||||| |     ||||||| || |  |||| |||||||||| ||||||||||||    
T  55437134 tatgaacaacgtcataagttgttttcataagttctttcaaacaatttcacaaa-----acttatggcagtagataaactcaaataagccaatccaaacag 55437228  T

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Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 14194565 - 14194486
Alignment:
Q  29 gataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgta-taagctaattttatagcaaa 107  Q
    ||||| || |||||||| ||||||||  |||||||||| ||||||||||  ||| |||| |||| |||||||||||||||    
T  14194565 gataagcagcttatttggaacttatagcacaaacacttctcatgataagagcttctgtagtaagttaattttatagcaaa 14194486  T

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Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 23503485 - 23503544
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaatt 127  Q
    ||||||||||  ||||||||||| |||||| |||| ||||| |||||||| |||||||||    
T  23503485 tcatgataagtgcttatgtataatctaattctataacaaaatataaaataaagttaaatt 23503544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 27043962 - 27043903
Alignment:
Q  80 cttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||||||||||| || || |||| |||| ||||||||| ||||||||||| |||||||||    
T  27043962 cttatgtataaggtacttatataacaaaggataaaataaagttaaattgttttcgtataa 27043903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 44797764 - 44797872
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcactta----tgtataagctaattttatagcaaaagataaaataca 119  Q
    |||||||||||||||||||||||||||||||  |||| |  || ||||| ||||   |||    || |||||||| |||||||||||||||||||| |      
T  44797764 gtttggataaacaacttatttgcaacttatagcacaagcgattatcatggtaagagattatatttgcataagctatttttatagcaaaagataaaacaac 44797863  T
Q  120 gttaaattg 128  Q
    |||||||||    
T  44797864 gttaaattg 44797872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 47119133 - 47119086
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcat 71  Q
    |||||||||||||||||||||||||||||||  |||| ||||| ||||    
T  47119133 gtttggataaacaacttatttgcaacttatagcacaagcacttatcat 47119086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 17204010 - 17204072
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgt 86  Q
    |||||||||||||||||||||||| ||||||  |||| ||||| ||| ||||| | |||||||    
T  17204010 gtttggataaacaacttatttgcagcttatagaacaagcacttatcacgataaccgcttatgt 17204072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 114
Target Start/End: Complemental strand, 21731797 - 21731751
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaa 114  Q
    ||||||||||  |||| |||||||||| |||||||||||||||||||    
T  21731797 tcatgataagtgcttacgtataagctatttttatagcaaaagataaa 21731751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 40174495 - 40174550
Alignment:
Q  72 gataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    |||| ||||||||||||||||||  |||||||||||| ||||| || |||||||||||    
T  40174495 gatatgcacttatgtataagcta--tttatagcaaaaaataaattaaagttaaattgt 40174550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 2987070 - 2987171
Alignment:
Q  24 gtttggataaacaactta-tttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtt 122  Q
    |||||||||||||| ||| |||||| ||||||| | ||    || ||||||||||||||||| ||||||||| || || | ||||| |||||||| ||||    
T  2987070 gtttggataaacaagttaatttgcagcttataacataagtgtttatcatgataagcacttatttataagctatttctacaacaaaaaataaaataaagtt 2987169  T
Q  123 aa 124  Q
    ||    
T  2987170 aa 2987171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 25904335 - 25904294
Alignment:
Q  87 ataagctaattttatagcaaaagataaaatacagttaaattg 128  Q
    |||||||| ||||| |||||||||||||||| ||||||||||    
T  25904335 ataagctatttttacagcaaaagataaaataaagttaaattg 25904294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 27043789 - 27043748
Alignment:
Q  213 acttatgtcaatcaataagctcaaataagtcaatccaaacag 254  Q
    |||||||||| |  ||||||||||||||||||||||||||||    
T  27043789 acttatgtcagtagataagctcaaataagtcaatccaaacag 27043748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 30066908 - 30066839
Alignment:
Q  70 atgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||||||||| ||||||||||| || |||| ||||||||||   | ||||| ||||| |||||||||    
T  30066908 atgataagcacttgtgtataagctatttatataccaaaagataagcaaaagttacattgttttcgtataa 30066839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 38336856 - 38336815
Alignment:
Q  213 acttatgtcaatcaataagctcaaataagtcaatccaaacag 254  Q
    ||||||||||||  ||||||||||||||||||||| ||||||    
T  38336856 acttatgtcaatggataagctcaaataagtcaatcaaaacag 38336815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 50681287 - 50681218
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    |||||||||||||||||||||  | ||||||  ||||  |||| |||||||||||  |||||||||||||    
T  50681287 gtttggataaacaacttatttatagcttatagcacaagaacttatcatgataagcgtttatgtataagct 50681218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 257
Target Start/End: Complemental strand, 54581097 - 54581068
Alignment:
Q  228 taagctcaaataagtcaatccaaacaggcc 257  Q
    ||||||||||||||||||||||||||||||    
T  54581097 taagctcaaataagtcaatccaaacaggcc 54581068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 3175894 - 3175938
Alignment:
Q  85 gtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    |||||||||| || ||||||||||||||||||| ||| |||||||    
T  3175894 gtataagctacttctatagcaaaagataaaataaagtcaaattgt 3175938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 14011176 - 14011220
Alignment:
Q  84 tgtataagctaattttatagcaaaagataaaatacagttaaattg 128  Q
    ||||||||||| ||||||| |||||||||||||| || |||||||    
T  14011176 tgtataagctagttttataacaaaagataaaataaaggtaaattg 14011220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 17822824 - 17822780
Alignment:
Q  213 acttatgtcaatcaataagctcaaataagtcaatccaaacaggcc 257  Q
    |||||||||| |  |||||||||||||||| ||||||||||||||    
T  17822824 acttatgtcagtagataagctcaaataagttaatccaaacaggcc 17822780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 17884009 - 17884065
Alignment:
Q  83 atgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||| ||||||| || |||| |||||||||||||| ||||||||||| || ||||||    
T  17884009 atgtgtaagctatttctataacaaaagataaaataaagttaaattgtttttgtataa 17884065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 21193937 - 21193973
Alignment:
Q  81 ttatgtataagctaattttatagcaaaagataaaata 117  Q
    |||||||||||||| |||||||| |||||||||||||    
T  21193937 ttatgtataagctatttttatagtaaaagataaaata 21193973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 23582416 - 23582384
Alignment:
Q  221 caatcaataagctcaaataagtcaatccaaaca 253  Q
    |||| ||||||||||||||||||||||||||||    
T  23582416 caataaataagctcaaataagtcaatccaaaca 23582384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 49939965 - 49939913
Alignment:
Q  153 cttatgtacaatgtcataagttgttttcataagttcttgcaaagaatctcaca 205  Q
    |||||| ||||||||||||| | ||||||||||||||| |||| | |||||||    
T  49939965 cttatgaacaatgtcataagctcttttcataagttcttccaaatagtctcaca 49939913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 21421 - 21351
Alignment:
Q  69 catgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||| |||||||||    
T  21421 catgataagcacttatgtataagctatttttataggaaaagataaaataaagttaaattgttttcgtataa 21351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 58857 - 58934
Alignment:
Q  62 cacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||| ||||||| ||||||||||| ||||||| |||||||| ||||| ||||||| ||||||||||| |||||||||    
T  58857 cacttatcatgatcagcacttatgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataa 58934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 26143828 - 26143717
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtta 123  Q
    ||||||||||||||||||||||||  |||||| |||| |||||  ||||||| |||||| ||||||||||| || ||||||||||||||||||| ||||     
T  26143828 gtttggataaacaacttatttgcagtttataacacaagcacttaccatgata-gcacttgtgtataagctatttctatagcaaaagataaaataaagttc 26143730  T
Q  124 aattgtgttcgta 136  Q
    |||| | ||||||    
T  26143729 aattatattcgta 26143717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 9174696 - 9174787
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaa 115  Q
    |||||||||||||||||||||||| ||||| |||  | || || ||||||||| ||||||||||||||||| || ||||||| |||| ||||    
T  9174696 gtttggataaacaacttatttgcagcttatgagattagcatttatcatgataaacacttatgtataagctatttctatagcacaagaaaaaa 9174787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 19608813 - 19608723
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaa 114  Q
    ||||||||| ||| | |||||||| ||||||  |||| ||| |  |||||||||||||||||||||||||| ||||| |||||||||||||    
T  19608813 gtttggatatacagcatatttgcagcttatagcacaagcacataccatgataagcacttatgtataagctatttttacagcaaaagataaa 19608723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 42420438 - 42420368
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtata 138  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||||||  |||||||||| || |||||    
T  42420438 tcatgataagcgcttacgtataagctatttttatagcaaaagataaaataacgttaaattgtttttgtata 42420368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 43570298 - 43570401
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtta 123  Q
    |||||| |||||| |||||||||| ||||||  |||| ||||| ||||||||||| ||  |||||||||||||| ||||| |||| |||||||  |||||    
T  43570298 gtttgggtaaacagcttatttgcagcttatagcacaagcacttatcatgataagcgct--tgtataagctaattctatagtaaaatataaaatgaagtta 43570395  T
Q  124 aattgt 129  Q
    ||||||    
T  43570396 aattgt 43570401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 4026743 - 4026802
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaatt 127  Q
    ||||||||||  ||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  4026743 tcatgataagtgcttatctataagctatttttatagcaaaagataaaataaagttaaatt 4026802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 11863806 - 11863872
Alignment:
Q  27 tggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    |||||||||||||||||| || |||| |  |||||||||||||||||||||| |||||| |||||||    
T  11863806 tggataaacaacttattttcagcttacagcacaaacacttgtcatgataagcgcttatgcataagct 11863872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 26626759 - 26626870
Alignment:
Q  25 tttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaa-tacagtta 123  Q
    ||||||||||||||||||||||| ||||||  | || | ||| |||||||||  |||||||||||    || |||||||||||||||||||  | |||||    
T  26626759 tttggataaacaacttatttgcagcttatagcataagctcttatcatgataaatacttatgtata----aactttatagcaaaagataaaacgaaagtta 26626854  T
Q  124 aattgtgttcgtataa 139  Q
    |||||| |||||||||    
T  26626855 aattgttttcgtataa 26626870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 2416195 - 2416300
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtta 123  Q
    ||||||||||||||||||||| || ||||||  ||||   ||| ||||| ||||  |||||||||||| || || | ||||||||||||||||  |||||    
T  2416195 gtttggataaacaacttattttcagcttatagcacaagttcttatcatgttaagtgcttatgtataagttatttctgtagcaaaagataaaatgaagtta 2416294  T
Q  124 aattgt 129  Q
    ||||||    
T  2416295 aattgt 2416300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 138
Target Start/End: Original strand, 3611149 - 3611222
Alignment:
Q  65 ttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtata 138  Q
    |||||||||||||  |||||||||||| || || ||||||||||| ||||||| ||||||||||| || |||||    
T  3611149 ttgtcatgataagtgcttatgtataagttatttctatagcaaaaggtaaaataaagttaaattgtttttgtata 3611222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 32592463 - 32592528
Alignment:
Q  28 ggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    |||||||||||||||||| | ||||||  |||||||||| |||| |||||| ||||||||||||||    
T  32592463 ggataaacaacttatttgtagcttatagcacaaacacttatcattataagcgcttatgtataagct 32592528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 39567829 - 39567890
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    ||||||||||||||| |||||||| || || |||| |||||||||||||| |||||||||||    
T  39567829 tcatgataagcacttgtgtataagatatttctataacaaaagataaaataaagttaaattgt 39567890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 41407173 - 41407242
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    ||||||||||||| ||| |||||| ||||||  |||| | ||| ||||||||||||||||||||||||||    
T  41407173 gtttggataaacagcttgtttgcagcttatagcacaagcgcttatcatgataagcacttatgtataagct 41407242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 42457874 - 42457935
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    |||||||||||| |||||||||| ||| || ||||| ||||||||||||| |||||||||||    
T  42457874 tcatgataagcatttatgtataatctatttctatagtaaaagataaaataaagttaaattgt 42457935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 40682561 - 40682477
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaa 108  Q
    ||||||||||||| ||||||||||||| |||   ||| | ||| ||||| ||||| ||||||||||||||| || ||||||||||    
T  40682561 gtttggataaacatcttatttgcaactcatagcgcaagcgcttatcatggtaagcgcttatgtataagctatttctatagcaaaa 40682477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 257
Target Start/End: Complemental strand, 7928315 - 7928213
Alignment:
Q  151 aacttatgtacaatgtc-ataagttgttttcataagttcttgcaaagaatctcacatacaagtacttatgtcaatcaataagctcaaataagtcaatcca 249  Q
    |||||||| |||||||| ||||| |||||||| |||||||| | || | ||||||| |     ||||||||||||  ||||||||||||||| |||||||    
T  7928315 aacttatgaacaatgtccataagctgttttcaaaagttctttctaacagtctcacaca-----acttatgtcaatagataagctcaaataagccaatcca 7928221  T
Q  250 aacaggcc 257  Q
    ||||||||    
T  7928220 aacaggcc 7928213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 254
Target Start/End: Original strand, 8017502 - 8017586
Alignment:
Q  166 tcataagttgttttcataagttcttgcaaagaatctcacatacaagtacttatgtcaatcaataagctcaaataagtcaatccaaacag 254  Q
    ||||||| ||||||||||||||||  |||| |||| |    |||||| |||||||||||  |||| |||||||||||||||||||||||    
T  8017502 tcataagctgttttcataagttctcccaaataatcgc----acaagtgcttatgtcaatagataacctcaaataagtcaatccaaacag 8017586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 23747232 - 23747299
Alignment:
Q  70 atgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtat 137  Q
    ||||||| ||||||||||||||||| ||||||| |||||||||||||  | ||||||| | |||||||    
T  23747232 atgataaacacttatgtataagctatttttatatcaaaagataaaatgaatttaaattattttcgtat 23747299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 39659706 - 39659639
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataag 91  Q
    |||||||||||||||||||||||| |||| |  |||||  ||| ||||||||||| ||||||||||||    
T  39659706 gtttggataaacaacttatttgcagcttagagcacaaatgcttatcatgataagcgcttatgtataag 39659639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 1830144 - 1830194
Alignment:
Q  207 acaagtacttatgtcaatcaataagctcaaataagtcaatccaaacaggcc 257  Q
    |||||| ||||||||| | ||||| ||||||||||||||||||||||||||    
T  1830144 acaagtgcttatgtcagtaaataaactcaaataagtcaatccaaacaggcc 1830194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 27695784 - 27695730
Alignment:
Q  25 tttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagca 79  Q
    ||||||||||||||||||||| | ||||||  |||||||||| ||||||||||||    
T  27695784 tttggataaacaacttatttgtagcttatagcacaaacacttatcatgataagca 27695730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 40759265 - 40759315
Alignment:
Q  207 acaagtacttatgtcaatcaataagctcaaataagtcaatccaaacaggcc 257  Q
    |||||| |||||||||||  ||||||||||||||| |||||||||||||||    
T  40759265 acaagtgcttatgtcaatagataagctcaaataaggcaatccaaacaggcc 40759315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 254
Target Start/End: Complemental strand, 44606115 - 44606028
Alignment:
Q  163 atgtcataagttgttttcataagttcttgcaaagaatctcacatacaagtacttatgtcaatcaataagctcaaataagtcaatccaaacag 254  Q
    |||||||||||||||||||||||||||| |||| | |    | |||||||||||||||||||  | |  |||||||||||||| ||||||||    
T  44606115 atgtcataagttgttttcataagttcttccaaacagt----cgtacaagtacttatgtcaatataaacactcaaataagtcaacccaaacag 44606028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 26202095 - 26202183
Alignment:
Q  164 tgtcataagttgttttcataagttcttgcaaagaatctcacatacaagtacttatgtcaatcaataagctcaaataagtcaatccaaacaggcc 257  Q
    |||||||||||||| |||||| |||| ||||||||||||||| |     ||||||||||    ||||| |||||||||| ||||||||||||||    
T  26202095 tgtcataagttgttctcataaattctagcaaagaatctcacaaa-----acttatgtcagcagataagttcaaataagttaatccaaacaggcc 26202183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 42659349 - 42659280
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    ||||||||||  |||||||||||| || |||  ||| |||||| ||||||||||| ||||||||||||||    
T  42659349 gtttggataagaaacttatttgcagctaatagcacacacacttatcatgataagcgcttatgtataagct 42659280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 15305785 - 15305829
Alignment:
Q  213 acttatgtcaatcaataagctcaaataagtcaatccaaacaggcc 257  Q
    ||||||||||||  ||||||||||||||| |||||||||||||||    
T  15305785 acttatgtcaatagataagctcaaataagccaatccaaacaggcc 15305829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 32364873 - 32364797
Alignment:
Q  63 acttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||| ||||||||||||||||||||||||||| || |||| |   ||||||||||   ||||||||| |||||||||    
T  32364873 acttatcatgataagcacttatgtataagctatttctataacttcagataaaataacattaaattgttttcgtataa 32364797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 9395012 - 9395127
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtta 123  Q
    ||||||||| | | |||||||||  ||||||  |||| | ||| ||||||||| |||| ||||||||| |  || ||||| ||||||||||||| || ||    
T  9395012 gtttggatacatagcttatttgcggcttatagcacaagctcttatcatgataaacactcatgtataagatttttctatagaaaaagataaaataaagcta 9395111  T
Q  124 aattgtgttcgtataa 139  Q
    |||||| ||| |||||    
T  9395112 aattgttttcatataa 9395127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 249
Target Start/End: Complemental strand, 9530681 - 9530646
Alignment:
Q  214 cttatgtcaatcaataagctcaaataagtcaatcca 249  Q
    ||||||||||| ||||||||||||||||||||||||    
T  9530681 cttatgtcaatgaataagctcaaataagtcaatcca 9530646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 18962170 - 18962111
Alignment:
Q  80 cttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||||| ||||| ||||||| |||||||||||||| ||||||| ||| ||| |||||    
T  18962170 cttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataa 18962111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 35459852 - 35459907
Alignment:
Q  84 tgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||||||| || |||| |||||||||||||| ||| ||||||| |||||||||    
T  35459852 tgtataagctatttgtataccaaaagataaaataaagtcaaattgttttcgtataa 35459907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 36114667 - 36114596
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||||||  |||||| |||| ||| || |||| |||||||||||||| ||||||||||| || ||||||    
T  36114667 tcatgataagtgcttatgcataacctagttctataacaaaagataaaataaagttaaattgtttttgtataa 36114596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 11863781 - 11863723
Alignment:
Q  81 ttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||||||| || || ||||| |||||||||||||||| ||||||||||| ||| |||||    
T  11863781 ttatgtatgagttagttttacagcaaaagataaaatagagttaaattgttttcatataa 11863723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 257
Target Start/End: Complemental strand, 15370268 - 15370238
Alignment:
Q  227 ataagctcaaataagtcaatccaaacaggcc 257  Q
    |||||||||||||||||||||||||||||||    
T  15370268 ataagctcaaataagtcaatccaaacaggcc 15370238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 22878203 - 22878249
Alignment:
Q  207 acaagtacttatgtcaatcaataagctcaaataagtcaatccaaaca 253  Q
    |||||| ||||||||| |  |||||||||||||||||||||||||||    
T  22878203 acaagtgcttatgtcagtggataagctcaaataagtcaatccaaaca 22878249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 42907286 - 42907352
Alignment:
Q  69 catgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgt 135  Q
    |||||||||||||||  ||||||||| || |||| || |||| |||||| ||||||||||| |||||    
T  42907286 catgataagcacttacatataagctatttctataacagaagaaaaaataaagttaaattgttttcgt 42907352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 3102631 - 3102668
Alignment:
Q  80 cttatgtataagctaattttatagcaaaagataaaata 117  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  3102631 cttatgtataagctatttttatagcaaaatataaaata 3102668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 7928435 - 7928390
Alignment:
Q  71 tgataagcacttatgtataagctaattttatagcaaaagataaaat 116  Q
    ||||||||||||||| |||||||| || ||| ||||||||||||||    
T  7928435 tgataagcacttatgaataagctatttctattgcaaaagataaaat 7928390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 189
Target Start/End: Original strand, 16451181 - 16451210
Alignment:
Q  160 acaatgtcataagttgttttcataagttct 189  Q
    ||||||||||||||||||||||||||||||    
T  16451181 acaatgtcataagttgttttcataagttct 16451210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 256
Target Start/End: Original strand, 27317504 - 27317533
Alignment:
Q  227 ataagctcaaataagtcaatccaaacaggc 256  Q
    ||||||||||||||||||||||||||||||    
T  27317504 ataagctcaaataagtcaatccaaacaggc 27317533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 36114345 - 36114406
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    ||||||||||  ||||| ||| ||||| ||||||  |||||||||||||| |||||||||||    
T  36114345 tcatgataagtgcttatatattagctatttttatgacaaaagataaaataaagttaaattgt 36114406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 44600458 - 44600538
Alignment:
Q  61 acacttgtcatgataagcacttatgtataagctaattttatagc--aaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||||| || |||||||  ||||||||||||||| || ||||||  ||||||||||||| |||||||| || ||| |||||    
T  44600458 acacttatcgtgataagtgcttatgtataagctatttctatagccaaaaagataaaataaagttaaatagttttcatataa 44600538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 750726 - 750778
Alignment:
Q  153 cttatgtacaatgtcataagttgttttcataagttcttgcaaagaatctcaca 205  Q
    |||||| |||||||||| || | |||||||||||||||||||| | |||||||    
T  750726 cttatgaacaatgtcattagctcttttcataagttcttgcaaacactctcaca 750778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 5045288 - 5045252
Alignment:
Q  81 ttatgtataagctaattttatagcaaaagataaaata 117  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  5045288 ttatgtataagctatttttataacaaaagataaaata 5045252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 5998833 - 5998789
Alignment:
Q  81 ttatgtataagctaattttatagcaaaagataaaatacagttaaa 125  Q
    |||| ||||||||| ||||||| |||||||||||||| |||||||    
T  5998833 ttatatataagctatttttataacaaaagataaaataaagttaaa 5998789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 257
Target Start/End: Complemental strand, 28810395 - 28810367
Alignment:
Q  229 aagctcaaataagtcaatccaaacaggcc 257  Q
    |||||||||||||||||||||||||||||    
T  28810395 aagctcaaataagtcaatccaaacaggcc 28810367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 43570469 - 43570505
Alignment:
Q  153 cttatgtacaatgtcataagttgttttcataagttct 189  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  43570469 cttatgaacaatgtcataagctgttttcataagttct 43570505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 44119722 - 44119766
Alignment:
Q  80 cttatgtataagctaattttatagcaaaagataaaatacagttaa 124  Q
    |||||||||||| || |||||||| ||||||||||||| ||||||    
T  44119722 cttatgtataagttatttttatagtaaaagataaaataaagttaa 44119766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 465841 - 465951
Alignment:
Q  29 gataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattg 128  Q
    |||||||||||||||||||  |||||| | || | | | ||||||||||||||||| ||||||||| || |||  |||||||||||||| ||||||||||    
T  465841 gataaacaacttatttgcagtttataacataagctcatttcatgataagcacttatatataagctatttctatgacaaaagataaaataaagttaaattg 465940  T
Q  129 tgttcgtataa 139  Q
    | || ||||||    
T  465941 tttttgtataa 465951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 28776857 - 28776955
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtt 122  Q
    |||||||||||||||||||||||| ||||||    || ||||| ||||||||||  ||||||||||||||| |||||| | ||||||||||||| ||||    
T  28776857 gtttggataaacaacttatttgcagcttatagcctaagcacttatcatgataagtgcttatgtataagctatttttattgaaaaagataaaataaagtt 28776955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 34736713 - 34736628
Alignment:
Q  25 tttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaaga 110  Q
    |||||||||||||||||| |||| ||||||  ||||||||||  |||||||| |||||||| |||||||| || ||||||||||||    
T  34736713 tttggataaacaacttatctgcagcttatagcacaaacacttaccatgataatcacttatgcataagctatttctatagcaaaaga 34736628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 9202936 - 9202821
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtta 123  Q
    ||||||||||||| |||||||||| ||||||  ||||    || ||||||||||  ||||| ||||||||| || | ||||||||||||||||| |||||    
T  9202936 gtttggataaacatcttatttgcagcttatagcacaagtgtttatcatgataagtgcttatatataagctatttctgtagcaaaagataaaataaagtta 9202837  T
Q  124 aattgtgttcgtataa 139  Q
    |||||| ||| |||||    
T  9202836 aattgttttcatataa 9202821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 19460572 - 19460469
Alignment:
Q  26 ttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaa 125  Q
    ||||||||||| |||||||||| ||||||  |||||  ||| ||||||||||||||||||||||| ||| || |||| ||||| ||  |||| |||||||    
T  19460572 ttggataaacagcttatttgcagcttatagcacaaatgcttatcatgataagcacttatgtataaactatttctatatcaaaacattgaataaagttaaa 19460473  T
Q  126 ttgt 129  Q
    ||||    
T  19460472 ttgt 19460469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 32372496 - 32372561
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtata 89  Q
    |||||||||||||||||||||||| ||||||  |||| ||||| ||||||||||| ||||||||||    
T  32372496 gtttggataaacaacttatttgcagcttatagcacaagcacttatcatgataagcccttatgtata 32372561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 7674574 - 7674645
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||||||||||||| ||||||||| || |||| |||||||||||||| | ||||||||| ||| |||||    
T  7674574 tcatgataagcacttatatataagctatttctataccaaaagataaaataaatttaaattgttttcttataa 7674645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 12425497 - 12425568
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||||| | ||||||||||| ||| || ||||| ||||||||||||| ||||||||||| |||||||||    
T  12425497 tcatgataaacgcttatgtataaactatttatatagtaaaagataaaataaagttaaattgttttcgtataa 12425568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 4014568 - 4014507
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    ||||||||||| | ||||||||||||| || ||||||||||||||||||| ||||| |||||    
T  4014568 tcatgataagcgcctatgtataagctatttctatagcaaaagataaaataaagttagattgt 4014507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 39105356 - 39105461
Alignment:
Q  34 acaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttc 133  Q
    |||||||||||||| ||||||  | ||   ||| ||||||||||| ||||||||||||||| || |||||| ||| || ||||  ||||||||||| |||    
T  39105356 acaacttatttgcagcttatagcataagtgcttatcatgataagcgcttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttc 39105455  T
Q  134 gtataa 139  Q
    ||||||    
T  39105456 gtataa 39105461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 42569124 - 42569053
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||||||| |||||| | |||||| || ||||||||||||||||||| |||  |||||| |||||||||    
T  42569124 tcatgataagcgcttatgaaaaagctatttctatagcaaaagataaaataaagtctaattgttttcgtataa 42569053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 706394 - 706448
Alignment:
Q  73 ataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaatt 127  Q
    |||||| ||||||||||||||| || ||||| ||||||||||||| |||||||||    
T  706394 ataagcgcttatgtataagctatttctatagtaaaagataaaatatagttaaatt 706448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 3566473 - 3566403
Alignment:
Q  57 acaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaatt 127  Q
    |||||||||| ||||||||||||||||  ||||||||| || |||| | ||||| |||||| |||||||||    
T  3566473 acaaacacttatcatgataagcacttacctataagctatttctatacccaaagagaaaataaagttaaatt 3566403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 11835164 - 11835270
Alignment:
Q  30 ataaacaacttattt-gcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattg 128  Q
    |||||||| |||||| |||| | |||| | |||| ||| ||||||||||   |||||||||| | | ||||||| |||||||||||||| ||||||||||    
T  11835164 ataaacaatttattttgcaattcataacataaacgcttatcatgataagtgtttatgtataaaccatttttataacaaaagataaaataaagttaaattg 11835263  T
Q  129 tgttcgt 135  Q
    | |||||    
T  11835264 ttttcgt 11835270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 14932231 - 14932277
Alignment:
Q  83 atgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    |||||||| ||| |||||||||||||||||||||| |||||||||||    
T  14932231 atgtataatctatttttatagcaaaagataaaataaagttaaattgt 14932277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 36797273 - 36797171
Alignment:
Q  25 tttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaa 124  Q
    ||||| ||||||  ||||||||||||||||  |||| ||||| |||| ||||   |||||||||||||| |  |  ||||||||||||||||| ||||||    
T  36797273 tttgggtaaacagtttatttgcaacttatagcacaagcacttatcattataactgcttatgtataagcttacat--tagcaaaagataaaataaagttaa 36797176  T
Q  125 attgt 129  Q
    |||||    
T  36797175 attgt 36797171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 37112395 - 37112330
Alignment:
Q  75 aagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataac 140  Q
    |||| ||||||||||||||| || || |||||||||||||| | ||||||||||| || |||||||    
T  37112395 aagcgcttatgtataagctatttctacagcaaaagataaaacaaagttaaattgtttttgtataac 37112330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 39128577 - 39128626
Alignment:
Q  80 cttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    |||||||||||||||||| |||| |||||||||||||| ||| |||||||    
T  39128577 cttatgtataagctaattctataacaaaagataaaataaagtcaaattgt 39128626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 3520303 - 3520355
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataa 76  Q
    ||||||||||||||||||||| || ||||||  |||| |||||||||||||||    
T  3520303 gtttggataaacaacttattttcagcttatagcacaagcacttgtcatgataa 3520355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 4855629 - 4855685
Alignment:
Q  73 ataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    ||||| |||||||||| ||||| ||||||| ||||| |||||||| |||||||||||    
T  4855629 ataagtacttatgtattagctatttttataacaaaaaataaaataaagttaaattgt 4855685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 6096428 - 6096503
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttata 102  Q
    ||||| |||||||||||||||||| || |||    || | ||| ||||||||||||||||||||||||||| |||||||    
T  6096428 gtttgtataaacaacttatttgcagctcatag---aagctcttatcatgataagcacttatgtataagctatttttata 6096503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 35299880 - 35299920
Alignment:
Q  217 atgtcaatcaataagctcaaataagtcaatccaaacaggcc 257  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  35299880 atgtcaatagataagctcaaataagtcaatccaaacaggcc 35299920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 5963468 - 5963365
Alignment:
Q  27 tggataaacaactta-tttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaa 125  Q
    ||||||||||||||| ||||||| |||||  | || || || ||||||||||| |||||||| || ||| || ||||   |||||||||||| |||||||    
T  5963468 tggataaacaacttaatttgcaatttatagcataagcatttatcatgataagcgcttatgtacaaactatttctataatgaaagataaaataaagttaaa 5963369  T
Q  126 ttgt 129  Q
    ||||    
T  5963368 ttgt 5963365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 10791099 - 10791146
Alignment:
Q  207 acaagtacttatgtcaatcaataagctcaaataagtcaatccaaacag 254  Q
    ||||||||||||||||||  ||||||| |||||||||||| |||||||    
T  10791099 acaagtacttatgtcaattgataagctgaaataagtcaattcaaacag 10791146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 35446000 - 35446051
Alignment:
Q  87 ataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtata 138  Q
    |||||||| |||||||||||| ||||||||| ||||||||||| || |||||    
T  35446000 ataagctatttttatagcaaatgataaaataaagttaaattgtttttgtata 35446051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 40426634 - 40426689
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagca 79  Q
    |||||||||||||||| ||||||| ||||||  |||| ||||| ||||||||||||    
T  40426634 gtttggataaacaactcatttgcagcttatagcacaagcacttatcatgataagca 40426689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 40590457 - 40590508
Alignment:
Q  72 gataagcacttatgtataagctaattttatagcaaaagataaaatacagtta 123  Q
    ||||||| ||||||||||||||| || ||||| ||||||||||||| |||||    
T  40590457 gataagcgcttatgtataagctacttctatagaaaaagataaaataaagtta 40590508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 1465159 - 1465105
Alignment:
Q  72 gataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaat 126  Q
    ||||||| ||||||||||||||| || ||||||| | ||||||||| ||||||||    
T  1465159 gataagcgcttatgtataagctatttctatagcataggataaaataaagttaaat 1465105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 256
Target Start/End: Original strand, 11707167 - 11707197
Alignment:
Q  226 aataagctcaaataagtcaatccaaacaggc 256  Q
    |||||||||||||||||||||||||||||||    
T  11707167 aataagctcaaataagtcaatccaaacaggc 11707197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 12857903 - 12857837
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataa 90  Q
    |||||||||||||||||||||| |||||||   |||||||| | |||| |||||||| |||| ||||    
T  12857903 gtttggataaacaacttatttgtaacttattgcacaaacacgtatcatcataagcacctatgcataa 12857837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 29925786 - 29925828
Alignment:
Q  87 ataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    |||||||| ||||||||||||||||||||||  ||||||||||    
T  29925786 ataagctatttttatagcaaaagataaaatagcgttaaattgt 29925828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 39919778 - 39919720
Alignment:
Q  80 cttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtata 138  Q
    |||||||||||||||||| |||| |||||||| ||||| |  |||||||| ||||||||    
T  39919778 cttatgtataagctaattctataacaaaagattaaataaaaataaattgtattcgtata 39919720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 42500350 - 42500308
Alignment:
Q  87 ataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    |||||||| ||||||| |||||||||||||| |||||||||||    
T  42500350 ataagctatttttatatcaaaagataaaataaagttaaattgt 42500308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 7319209 - 7319140
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    ||||| ||||||| ||||||| || ||||||  |||| | ||| |||||||||||||||||| |||||||    
T  7319209 gtttgaataaacagcttatttacagcttatagcacaagcgcttatcatgataagcacttatgcataagct 7319140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 11615452 - 11615505
Alignment:
Q  86 tataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||||| ||||||| |||||||||||||| ||| ||||||| | |||||||    
T  11615452 tataagctatttttataacaaaagataaaataaagtcaaattgtttacgtataa 11615505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 11835386 - 11835427
Alignment:
Q  212 tacttatgtcaatcaataagctcaaataagtcaatccaaaca 253  Q
    ||||||||||||| |||||||| ||||||||||||| |||||    
T  11835386 tacttatgtcaataaataagctaaaataagtcaatctaaaca 11835427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 13697957 - 13697904
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataag 77  Q
    |||||||||||||||||||||||| ||||||| | || || || ||||||||||    
T  13697957 gtttggataaacaacttatttgcagcttataacataagcatttatcatgataag 13697904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 24030600 - 24030547
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataag 77  Q
    ||||||||||||| |||||||||| ||||||  |||| ||||| ||||||||||    
T  24030600 gtttggataaacagcttatttgcagcttatagcacaagcacttatcatgataag 24030547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 26005436 - 26005367
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    |||||||||||||||||||| | | ||||||  |||||||||| | |||||||   ||||||||||||||    
T  26005436 gtttggataaacaacttattagaagcttatagcacaaacacttattatgataattgcttatgtataagct 26005367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 32022004 - 32022053
Alignment:
Q  75 aagcacttatgtataagctaattttatagcaaaagataaaatacagttaa 124  Q
    |||| |||||| |||||||| ||||||||||||||||||| || ||||||    
T  32022004 aagcgcttatgcataagctagttttatagcaaaagataaattaaagttaa 32022053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 34112803 - 34112872
Alignment:
Q  70 atgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||||| ||||||||||||||| || ||||| ||||||| || || |||||| |||| ||| |||||    
T  34112803 atgataagcgcttatgtataagctatttctatagtaaaagattaattaaagttaagttgttttcatataa 34112872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 40864660 - 40864709
Alignment:
Q  80 cttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    ||||| |||| |||| |||||||||| ||||||||||| |||||||||||    
T  40864660 cttatatataggctatttttatagcataagataaaataaagttaaattgt 40864709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 189
Target Start/End: Original strand, 41535444 - 41535473
Alignment:
Q  160 acaatgtcataagttgttttcataagttct 189  Q
    ||||||||||||||||||||||||||||||    
T  41535444 acaatgtcataagttgttttcataagttct 41535473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 42100047 - 42099956
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaata 117  Q
    ||||||| ||||| |||||| | | |||||| || || ||||| ||||||||||  ||||||||||||||| || |||||||||| ||||||||    
T  42100047 gtttggagaaacagcttattcgaagcttata-gataatcacttatcatgataagtgcttatgtataagctatttatatagcaaaa-ataaaata 42099956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 6593181 - 6593285
Alignment:
Q  24 gtttggataaacaactta-tttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtt 122  Q
    |||||||||||||||||| ||| || ||||||  | || || || || ||||| || ||||||||||| | | || |||| |||||||||||||| ||||    
T  6593181 gtttggataaacaacttaatttacagcttatagcataatcatttatcttgatacgcgcttatgtataaacaatttctataacaaaagataaaataaagtt 6593280  T
Q  123 aaatt 127  Q
    |||||    
T  6593281 aaatt 6593285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 7853602 - 7853674
Alignment:
Q  86 tataagctaattttatagcaaaagataaaatacagttaaattgtgttcgta-taactatcttagagaacttat 157  Q
    ||||| ||| || |||| |||||||||||||| ||||||||||| | |||| || ||||||| ||||||||||    
T  7853602 tataaactatttctataacaaaagataaaataaagttaaattgtttccgtattagctatcttggagaacttat 7853674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 7853696 - 7853732
Alignment:
Q  153 cttatgtacaatgtcataagttgttttcataagttct 189  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  7853696 cttatgaacaatgtcataagttgtttccataagttct 7853732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 7984868 - 7984948
Alignment:
Q  32 aaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagata 112  Q
    |||||||||||||||| ||||||  |||  | ||| ||||||||||| ||||||| ||||||| || | ||| ||||||||    
T  7984868 aaacaacttatttgcagcttatagtacatgcgcttatcatgataagcgcttatgtttaagctacttctttagaaaaagata 7984948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 12433568 - 12433532
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaa 60  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  12433568 gtttggataaacaacttatttgcagcttataacacaa 12433532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 16938065 - 16938001
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtat 88  Q
    ||||||| |||||||||||||| | ||||||| ||||    || |||||||||||||||||||||    
T  16938065 gtttggacaaacaacttatttgaagcttataacacaagtgtttatcatgataagcacttatgtat 16938001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 34205353 - 34205393
Alignment:
Q  214 cttatgtcaatcaataagctcaaataagtcaatccaaacag 254  Q
    ||||||||| | |||||| ||||||||||||||||||||||    
T  34205353 cttatgtcagtaaataagttcaaataagtcaatccaaacag 34205393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 40848639 - 40848731
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaat 116  Q
    |||||||||||||  | ||||||| ||||||  ||||   ||| | ||||||||||||||||||||| ||| || || |||||||||| ||||    
T  40848639 gtttggataaacagttaatttgcatcttatagtacaagtgcttttaatgataagcacttatgtataaactatttctagagcaaaagatgaaat 40848731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 45975572 - 45975665
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaata 117  Q
    ||||||||||| | |||||||| | ||||||| |||||||||| ||||||||||| ||||||||||| ||| || ||||| ||| |||||||||    
T  45975572 gtttggataaatagcttatttgtagcttataacacaaacacttatcatgataagcccttatgtataaactatttatataggaaaggataaaata 45975665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 1829142 - 1829056
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaaga 110  Q
    |||||||||||||||||||||| ||| ||||  | |||||||| ||||||||||| ||||||||||||  | ||||||| |||||||    
T  1829142 gtttggataaacaacttatttgaaacctatagcataaacacttatcatgataagcgcttatgtataagtcatttttataacaaaaga 1829056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 30581684 - 30581789
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtta 123  Q
    |||||||||||||  ||||||||| ||||||  ||||  |||| |||||||||||| ||||  |||||||| |||||||| ||| ||| ||||| |||||    
T  30581684 gtttggataaacagtttatttgcagcttatagaacaagtacttttcatgataagcagttatacataagctatttttatagaaaacgatgaaataaagtta 30581783  T
Q  124 aattgt 129  Q
    ||||||    
T  30581784 aattgt 30581789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 37841918 - 37841995
Alignment:
Q  62 cacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||| |||||||||| ||| |||||||||||| |  |||| |||| ||||||||| ||||||||||| |||||||||    
T  37841918 cacttatcatgataagtactcatgtataagctattcctataacaaatgataaaataaagttaaattgttttcgtataa 37841995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 127
Target Start/End: Original strand, 9656561 - 9656635
Alignment:
Q  57 acaaacacttgtcatgataagcacttatgtataagcta---attt-tatagcaaaagataaaatacagttaaatt 127  Q
    |||||||||| ||||||||||||| |||||||||||||   |||| |||||||||| |||||||| |||||||||    
T  9656561 acaaacacttatcatgataagcacctatgtataagctatttatttctatagcaaaaaataaaataaagttaaatt 9656635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 38116329 - 38116261
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||||||| ||||||||||||||| ||  ||||| |||||||||||  |||||||||||||||||||||    
T  38116329 tcatgataagcgcttatgtataagctatttcaatagc-aaagataaaat--agttaaattgtgttcgtataa 38116261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 47499031 - 47498909
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttat-------agcaaaagataaaat 116  Q
    |||||||||||||||||||||||| ||||||  ||||   ||| ||||||||||| ||| ||||||||||| ||| ||       | |||||||||||||    
T  47499031 gtttggataaacaacttatttgcagcttatagcacaagtgcttatcatgataagcgcttgtgtataagctattttaatttttaacaacaaaagataaaat 47498932  T
Q  117 acagttaaattgtgttcgtataa 139  Q
    | ||||||||| | |||||||||    
T  47498931 aaagttaaattattttcgtataa 47498909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 14331661 - 14331732
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaa 95  Q
    |||| |||||||| |||||||| | ||||||  |||| | ||| ||||||||||||||||||||||||||||    
T  14331661 gtttagataaacagcttatttgaagcttatagcacaagcgcttctcatgataagcacttatgtataagctaa 14331732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 46252826 - 46252767
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaatt 127  Q
    |||||||| ||||| ||||||| |||| ||||||| |||||||||||||| |||||||||    
T  46252826 tcatgatatgcactaatgtataggctatttttataacaaaagataaaataaagttaaatt 46252767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 51190787 - 51190858
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||||| ||||||| || |||||| || || |||||||||||||||| ||||||||||| || ||||||    
T  51190787 tcatgataaacacttatttaaaagctatttgtaaagcaaaagataaaataaagttaaattgtttttgtataa 51190858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 8852786 - 8852856
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtata 138  Q
    ||||||||| |||| |||||||||||| ||||| | |||||||||||||| ||||| ||||| ||| ||||    
T  8852786 tcatgataaacactaatgtataagctatttttacaacaaaagataaaataaagttatattgttttcttata 8852856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 36070181 - 36070247
Alignment:
Q  73 ataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||||| |||||||||  |||| ||||||| |||||||||||||| ||||||||||| |||| ||||    
T  36070181 ataagcgcttatgtatgggctatttttataacaaaagataaaataaagttaaattgtcttcggataa 36070247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 5894206 - 5894157
Alignment:
Q  140 ctatcttagagaacttatgtacaatgtcataagttgttttcataagttct 189  Q
    ||||||| ||||||||||| |||||| |||||| ||||||||||||||||    
T  5894206 ctatcttggagaacttatgaacaatgacataagctgttttcataagttct 5894157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 37473271 - 37473340
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    |||||||||||||||||||||||| |||||   ||||   ||| |||||| |||||||||||||||||||    
T  37473271 gtttggataaacaacttatttgcagcttattgcacaagttcttatcatgacaagcacttatgtataagct 37473340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 37842485 - 37842428
Alignment:
Q  82 tatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||||||||| || ||||||||||||| ||||| ||||||| |||||||| ||||    
T  37842485 tatgtataagctatttctatagcaaaagatgaaataaagttaaactgtgttcgaataa 37842428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 38247326 - 38247394
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    ||||||||||||| || ||||||| ||||||  |||| ||||| |||||||| |||||||||||||||||    
T  38247326 gtttggataaacagct-atttgcagcttatagcacaagcacttatcatgatatgcacttatgtataagct 38247394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 45145165 - 45145222
Alignment:
Q  81 ttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtata 138  Q
    |||||||||||||| ||||||||||||||||||||||   ||||||||| || |||||    
T  45145165 ttatgtataagctatttttatagcaaaagataaaataatattaaattgtttttgtata 45145222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 1432446 - 1432502
Alignment:
Q  73 ataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    |||||||| ||||||||||||| || ||||| ||||||||||||| |||| ||||||    
T  1432446 ataagcacatatgtataagctatttctatagtaaaagataaaatagagttcaattgt 1432502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 9572252 - 9572192
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattg 128  Q
    ||||||| ||| || |||||| ||||| || ||||||||||||||||||| ||||||||||    
T  9572252 tcatgatcagcgctaatgtattagctatttctatagcaaaagataaaataaagttaaattg 9572192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 41163145 - 41163077
Alignment:
Q  71 tgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||||||| ||||||||| || || |||||| ||||||||||||||  ||||||||||  |||||||||    
T  41163145 tgataagcgcttatgtatgagttatttttattgcaaaagataaaatgaagttaaattgctttcgtataa 41163077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 127
Target Start/End: Complemental strand, 3887764 - 3887717
Alignment:
Q  80 cttatgtataagctaattttatagcaaaagataaaatacagttaaatt 127  Q
    ||||||||||||||| ||  |||||||||||||||||| |||||||||    
T  3887764 cttatgtataagctatttcaatagcaaaagataaaataaagttaaatt 3887717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 7028230 - 7028289
Alignment:
Q  80 cttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||||||| ||| || ||||||||||||||||||| |||||| |||| || ||||||    
T  7028230 cttatgtataaactatttctatagcaaaagataaaataaagttaagttgtttttgtataa 7028289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 139
Target Start/End: Original strand, 15784250 - 15784333
Alignment:
Q  57 acaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaa-gataaaatacagttaaattgtgttcgtataa 139  Q
    |||| ||||| | ||||||||| ||||||||||||||| || || || |||| | ||||||| ||||||||||| |||||||||    
T  15784250 acaagcacttattatgataagcgcttatgtataagctatttctaaagtaaaaaggtaaaataaagttaaattgttttcgtataa 15784333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 23544784 - 23544713
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||||||| ||||||||||||||| || ||| | ||||||||||||  ||| ||||||| ||| |||||    
T  23544784 tcatgataagcgcttatgtataagctatttctatggaaaaagataaaattaagtcaaattgttttcatataa 23544713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 27146436 - 27146333
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtta 123  Q
    ||||||||||| | |||||||||| ||||||  | ||  || | |||||||||||  ||||||||||| || || || |||||||||||||||| | |||    
T  27146436 gtttggataaatagcttatttgcagcttatagcataagtacatatcatgataagcgtttatgtataaggtatttctacagcaaaagataaaataaattta 27146337  T
Q  124 aatt 127  Q
    ||||    
T  27146336 aatt 27146333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 33976283 - 33976330
Alignment:
Q  207 acaagtacttatgtcaatcaataagctcaaataagtcaatccaaacag 254  Q
    |||||| || |||||| | |||||||||||||||||||||||||||||    
T  33976283 acaagtgctgatgtcattaaataagctcaaataagtcaatccaaacag 33976330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 836519 - 836412
Alignment:
Q  26 ttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaa 125  Q
    |||||||||||||||||||||| ||||||| |  |      || ||||||| ||||||||| ||||||| ||||||||  |||||||||||| |  ||||    
T  836519 ttggataaacaacttatttgcagcttataacaaga------gttatgataaacacttatgtgtaagctatttttatagtgaaagataaaataaaactaaa 836426  T
Q  126 ttgtgttcgtataa 139  Q
    |||| || ||||||    
T  836425 ttgtttttgtataa 836412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 3495804 - 3495707
Alignment:
Q  43 ttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaag-ataaaatacagttaaattgtgttcgtataac 140  Q
    |||||||||||| || |||||||| |||| |||| ||| ||||||||||||  || |||| |||||| |||||||| |||||||||  ||| |||||||    
T  3495804 ttgcaacttataggataaacacttatcattataaacac-tatgtataagctttttctataacaaaagaataaaataaagttaaattacgtttgtataac 3495707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 3887646 - 3887604
Alignment:
Q  153 cttatgtacaatgtcataagttgttttcataagttcttgcaaa 195  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||    
T  3887646 cttatgaacaatgtcataagatgttttcataagttcttccaaa 3887604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 4700205 - 4700155
Alignment:
Q  73 ataagcacttatgtataagctaattttatagcaaaagataaaatacagtta 123  Q
    ||||||||||||||| |||||| || |||| |||||||||||||| |||||    
T  4700205 ataagcacttatgtacaagctatttctataacaaaagataaaataaagtta 4700155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 5894351 - 5894281
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagcta 94  Q
    ||||||||||||| |||||||| | ||||||  ||||   ||| ||||||||||| |||||||||||||||    
T  5894351 gtttggataaacagcttatttgaagcttatagcacaagtgcttatcatgataagcgcttatgtataagcta 5894281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 27145752 - 27145698
Alignment:
Q  151 aacttatgtacaatgtcataagttgttttcataagttcttgcaaagaatctcaca 205  Q
    |||||||| |||||||||||||| |||||| ||||||||| |||| | |||||||    
T  27145752 aacttatgaacaatgtcataagtcgttttcttaagttcttccaaaaagtctcaca 27145698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 36151636 - 36151578
Alignment:
Q  81 ttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||||||||||||| ||  ||| |||||||||||||| ||| ||||||| |||||||||    
T  36151636 ttatgtataagctatttcaataacaaaagataaaataaagtcaaattgttttcgtataa 36151578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 46423152 - 46423194
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacactt 66  Q
    |||||||||||||||||||||||| ||||||| |||| |||||    
T  46423152 gtttggataaacaacttatttgcagcttataacacaagcactt 46423194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 47432041 - 47432083
Alignment:
Q  87 ataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    |||||||| |||||||| ||||||||||||| |||||||||||    
T  47432041 ataagctatttttatagaaaaagataaaataaagttaaattgt 47432083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 289178 - 289227
Alignment:
Q  80 cttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    |||| |||||||||| |||| ||||||||||||||||| ||| |||||||    
T  289178 cttaagtataagctatttttgtagcaaaagataaaataaagtcaaattgt 289227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 1510507 - 1510438
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    ||||||||||||| |||||||| | ||||||  |||| | ||| || |||||||||||||| ||||||||    
T  1510507 gtttggataaacagcttatttgtatcttatagcacaagcgcttatcttgataagcacttatatataagct 1510438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 4549804 - 4549853
Alignment:
Q  80 cttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    |||||||| |||||| || |||| |||||||||||||| |||||||||||    
T  4549804 cttatgtacaagctatttctataacaaaagataaaataaagttaaattgt 4549853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 14576847 - 14576782
Alignment:
Q  28 ggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    ||||||||| ||||||| || ||||||  |||| | ||| ||||||||||||||||| ||||||||    
T  14576847 ggataaacatcttatttccagcttatagcacaagctcttatcatgataagcacttatttataagct 14576782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 17830026 - 17830091
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtata 89  Q
    ||||||||||||||| ||| | || ||||||  |||| ||||| ||||||||||||||||| ||||    
T  17830026 gtttggataaacaacatatcttcagcttatatcacaagcacttatcatgataagcacttatctata 17830091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 18556869 - 18556914
Alignment:
Q  84 tgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    ||||||||||| |||||| |||||||||||||||  ||||||||||    
T  18556869 tgtataagctatttttattgcaaaagataaaatattgttaaattgt 18556914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 44932130 - 44932061
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    |||||||||||||  || |||||| | ||||| |  ||||||| |||||||||||||||| |||||||||    
T  44932130 gtttggataaacagtttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagct 44932061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 3234221 - 3234153
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagc 92  Q
    ||||||||||  ||||| |||||||||||||  |||| | ||| ||||||||||| ||||| |||||||    
T  3234221 gtttggataactaacttgtttgcaacttatagcacaagcgcttatcatgataagcgcttatatataagc 3234153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 6292599 - 6292643
Alignment:
Q  209 aagtacttatgtcaatcaataagctcaaataagtcaatccaaaca 253  Q
    |||| ||||||||| |  |||||||||||||||||||||||||||    
T  6292599 aagtgcttatgtcagtagataagctcaaataagtcaatccaaaca 6292643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 7069229 - 7069273
Alignment:
Q  71 tgataagcacttatgtataagctaattttatagcaaaagataaaa 115  Q
    ||||||||||||| |||||||||| |  |||||||||||||||||    
T  7069229 tgataagcacttaagtataagctattactatagcaaaagataaaa 7069273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 254
Target Start/End: Original strand, 11695986 - 11696014
Alignment:
Q  226 aataagctcaaataagtcaatccaaacag 254  Q
    |||||||||||||||||||||||||||||    
T  11695986 aataagctcaaataagtcaatccaaacag 11696014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 18327151 - 18327119
Alignment:
Q  163 atgtcataagttgttttcataagttcttgcaaa 195  Q
    |||||||||||||||||||||||||||| ||||    
T  18327151 atgtcataagttgttttcataagttcttccaaa 18327119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 34952148 - 34952212
Alignment:
Q  75 aagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||||| ||||||||||||| || || |||| ||| ||||||| ||||||||||| |||| ||||    
T  34952148 aagcacctatgtataagctatttctagagcagaagttaaaataaagttaaattgttttcgaataa 34952212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 45990187 - 45990131
Alignment:
Q  83 atgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||| |||| ||||||| |||||||||||||| ||| ||||||| ||| |||||    
T  45990187 atgtatatgctatttttatatcaaaagataaaataaagtaaaattgttttcatataa 45990131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 46139824 - 46139916
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaat 116  Q
    |||||| ||||||||||||||||| ||||||| |||| ||||| ||||||||||   |||| ||||||||| ||| ||||||||| |||||||    
T  46139824 gtttggttaaacaacttatttgcagcttataacacaagcacttatcatgataagtgattatctataagctattttaatagcaaaatataaaat 46139916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 20881824 - 20881719
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtta 123  Q
    |||| ||| ||||||||||||| |  |||||  |||| ||||| ||||||||||| ||||||||| |||||  | |||||||||||||||||   |||||    
T  20881824 gtttagatgaacaacttatttgtagtttatagcacaagcacttatcatgataagctcttatgtatgagctatatctatagcaaaagataaaacgaagtta 20881725  T
Q  124 aattgt 129  Q
    ||||||    
T  20881724 aattgt 20881719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 33672960 - 33673053
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaata 117  Q
    |||||||||||| | ||||||||| ||||||  ||||  | || | ||||||||| ||||||||||||||| || ||||||||| |||||||||    
T  33672960 gtttggataaactatttatttgcagcttatagcacaagtatttattatgataagcgcttatgtataagctacttctatagcaaaggataaaata 33673053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 33553007 - 33552939
Alignment:
Q  26 ttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagcta 94  Q
    |||||||||||||||||||||| |||||   |||| |||||  |||||||||| |||||||||||||||    
T  33553007 ttggataaacaacttatttgcagcttattgcacaagcacttaccatgataagcgcttatgtataagcta 33552939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 32714307 - 32714374
Alignment:
Q  28 ggataaacaactta-tttgcaacttataagacaaacacttgtcatgataagcacttatgtataagcta 94  Q
    |||||||||||||| ||| |||||||||| | ||||| || ||||||||||| |||||||||||||||    
T  32714307 ggataaacaacttaatttacaacttataatataaacatttatcatgataagcgcttatgtataagcta 32714374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 254
Target Start/End: Original strand, 34035971 - 34036069
Alignment:
Q  151 aacttatgtacaatgtcataagttgttttcataagttcttgcaaagaatctcacatacaagtacttatgtcaatcaataagctcaaataagtcaatccaa 250  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||  | ||||||     | ||| ||||||| |  |||||||||||||||||||| |||    
T  34035971 aacttatgaacaatgtcataagttattttcataagttcttccaagtagtctcac-----aatacatatgtcagtagataagctcaaataagtcaattcaa 34036065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 7644271 - 7644225
Alignment:
Q  208 caagtacttatgtcaatcaataagctcaaataagtcaatccaaacag 254  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  7644271 caagtacttatggcactaaataagctcaaataagtcaatccaaacag 7644225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 28613665 - 28613607
Alignment:
Q  81 ttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||||||||||||| ||||||| |||||||||||| | ||||||||||| || ||||||    
T  28613665 ttatgtataagctatttttataacaaaagataaaacaaagttaaattgtttttgtataa 28613607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 40009391 - 40009457
Alignment:
Q  63 acttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    |||| ||||||| ||| ||||||||||||||  ||||||| ||||||| |||||| |||||||||||    
T  40009391 acttatcatgattagcgcttatgtataagctgtttttataacaaaagacaaaataaagttaaattgt 40009457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 4970792 - 4970707
Alignment:
Q  167 cataagttgttttcataagttcttgcaaagaatctcacatacaagtacttatgtcaatcaataagctcaaataagtcaatccaaacaggcc 257  Q
    |||||||||||||||||||||||  |||| | |||||||    || ||||||||||    |||||||||||||||||||||||||||||||    
T  4970792 cataagttgttttcataagttctcccaaacagtctcaca----ag-acttatgtcacgagataagctcaaataagtcaatccaaacaggcc 4970707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 9210500 - 9210569
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    ||||||||||||| |||||||||| ||||||   |||||| || ||||||||| | ||||||||||||||    
T  9210500 gtttggataaacagcttatttgcagcttatagcgcaaacatttatcatgataatcgcttatgtataagct 9210569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 18865248 - 18865195
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataag 77  Q
    |||||||||||||||||||||||| ||||||  |||||| ||| ||||||||||    
T  18865248 gtttggataaacaacttatttgcagcttatagcacaaacgcttatcatgataag 18865195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 19214533 - 19214492
Alignment:
Q  70 atgataagcacttatgtataagctaattttatagcaaaagat 111  Q
    |||||||| |||||||||||||||| ||||||||||||||||    
T  19214533 atgataagaacttatgtataagctatttttatagcaaaagat 19214492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 28900760 - 28900821
Alignment:
Q  25 tttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgt 86  Q
    ||||||||||||||||||||||| ||||||| |||| || || | ||||||||| |||||||    
T  28900760 tttggataaacaacttatttgcagcttataacacaagcatttattatgataagcgcttatgt 28900821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 33128629 - 33128698
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    ||||||||||||| |||||||||| |||| |  |||||||||| ||||||||||  |||||| |||||||    
T  33128629 gtttggataaacagcttatttgcagcttacagcacaaacacttatcatgataagtgcttatgcataagct 33128698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 36517487 - 36517540
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataag 77  Q
    ||||| |||||||||||||||||||||||||| || | ||||| ||||||||||    
T  36517487 gtttgaataaacaacttatttgcaacttataacactagcacttatcatgataag 36517540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 46078019 - 46078088
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    ||||||| ||||| ||||| ||||||||| |  |||||||| | ||||||||||| ||||||||||||||    
T  46078019 gtttggacaaacagcttatatgcaacttaaagcacaaacacatatcatgataagcgcttatgtataagct 46078088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 139
Target Start/End: Original strand, 30180009 - 30180048
Alignment:
Q  100 atagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  30180009 atagcaaaagataaaataaagttaaattgttttcgtataa 30180048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 38138677 - 38138610
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataag 91  Q
    ||||||||||||| |||||||||  ||||||  |||| ||||||||||||||||   |||||||||||    
T  38138677 gtttggataaacagcttatttgcgtcttatagcacaatcacttgtcatgataagagtttatgtataag 38138610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 47177518 - 47177633
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtta 123  Q
    |||||||||||||||||||||||   |||||  | || ||||| | ||||||||| ||| |||||||| || || |||| ||||| | |||| | |||||    
T  47177518 gtttggataaacaacttatttgctgattatagcataagcacttatgatgataagcccttctgtataaggtatttctatatcaaaatacaaaacaaagtta 47177617  T
Q  124 aattgtgttcgtataa 139  Q
    |||||| ||| |||||    
T  47177618 aattgttttcatataa 47177633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 30133988 - 30134046
Alignment:
Q  81 ttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||||||||||||| ||||| | |||||||||||||| ||| || |||| |||||||||    
T  30133988 ttatgtataagctatttttacaacaaaagataaaataaagtcaacttgttttcgtataa 30134046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 257
Target Start/End: Original strand, 33128876 - 33128906
Alignment:
Q  227 ataagctcaaataagtcaatccaaacaggcc 257  Q
    |||||||||||||||||||||||||||||||    
T  33128876 ataagctcaaataagtcaatccaaacaggcc 33128906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 158
Target Start/End: Original strand, 42656446 - 42656532
Alignment:
Q  73 ataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa-ctatcttagagaacttatg 158  Q
    |||||||||||| ||||||||| || |||| |||||||||||||| ||| ||||  | || |||||| ||||||| |||| ||||||    
T  42656446 ataagcacttatatataagctatttctataacaaaagataaaataaagtcaaatcatttttgtataagctatcttggagagcttatg 42656532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 45004711 - 45004753
Alignment:
Q  87 ataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    |||| ||| |||||||||||||||||||||| |||||||||||    
T  45004711 ataaactatttttatagcaaaagataaaataaagttaaattgt 45004753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 45806451 - 45806409
Alignment:
Q  87 ataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    |||||||| ||||||||||||||||||||||  ||||||||||    
T  45806451 ataagctatttttatagcaaaagataaaataacgttaaattgt 45806409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 192
Target Start/End: Complemental strand, 15740416 - 15740387
Alignment:
Q  163 atgtcataagttgttttcataagttcttgc 192  Q
    ||||||||||||||||||||||||||||||    
T  15740416 atgtcataagttgttttcataagttcttgc 15740387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 21568826 - 21568757
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    ||||||||||||| ||| |||||| ||||||  | ||   ||| ||||||||||||||||||||||||||    
T  21568826 gtttggataaacagcttgtttgcagcttatagcataagtgcttatcatgataagcacttatgtataagct 21568757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 43153030 - 43152985
Alignment:
Q  84 tgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    ||||||||||| || |||| |||||||||||||| |||||||||||    
T  43153030 tgtataagctatttctataacaaaagataaaataaagttaaattgt 43152985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 47795839 - 47795924
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaag 109  Q
    |||| |||||||| |||||||||| ||||||  | || | ||| ||||||||| ||||||||||||| ||| || |||| ||||||    
T  47795839 gtttagataaacagcttatttgcagcttatagcataagcgcttatcatgataaccacttatgtataacctatttctatatcaaaag 47795924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 3968330 - 3968278
Alignment:
Q  77 gcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    ||||| ||||||||| || || ||||||||||||||||||| | |||||||||    
T  3968330 gcactgatgtataagttatttctatagcaaaagataaaataaatttaaattgt 3968278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 7241352 - 7241316
Alignment:
Q  151 aacttatgtacaatgtcataagttgttttcataagtt 187  Q
    |||||||| |||||||||||||| |||||||||||||    
T  7241352 aacttatgaacaatgtcataagtcgttttcataagtt 7241316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 21619295 - 21619359
Alignment:
Q  30 ataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagcta 94  Q
    ||||||| || ||||||| ||||||  |||| ||||| ||||||||||||||||| | |||||||    
T  21619295 ataaacatctaatttgcagcttatagcacaagcacttatcatgataagcacttatctctaagcta 21619359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 25635589 - 25635553
Alignment:
Q  153 cttatgtacaatgtcataagttgttttcataagttct 189  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  25635589 cttatgaacaatatcataagttgttttcataagttct 25635553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 9093705 - 9093629
Alignment:
Q  63 acttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||| ||||||||||| |||||| |||||||| || |||| |||||||||||||| ||||||||||| |||||||||    
T  9093705 acttatcatgataagcgcttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataa 9093629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 847941 - 848008
Alignment:
Q  25 tttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagc 92  Q
    |||||||||||||||| |||||| |||||||||||| || || |||| |||||| |||||||||||||    
T  847941 tttggataaacaacttttttgcagcttataagacaagcagttatcataataagcgcttatgtataagc 848008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 33117435 - 33117529
Alignment:
Q  28 ggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaatt 127  Q
    |||||||||||||||||||| |||||| |       ||| |||| ||||||||||||| |||||||| ||||||||||||| |||||||  |||||||||    
T  33117435 ggataaacaacttatttgcagcttatagg-------cttatcataataagcacttatgcataagctacttttatagcaaaatataaaattaagttaaatt 33117527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 127
Target Start/End: Complemental strand, 430559 - 430461
Alignment:
Q  30 ataaacaacttatttgcaacttataagacaaacacttgtcatgat-aagcacttatgtataagctaattttatagcaaaagataaaatacagttaaatt 127  Q
    |||||||||||||||||| ||||||| | |||||||  ||||||| ||  |||||||||||||||| || ||||  ||||||| ||||| |||||||||    
T  430559 ataaacaacttatttgcagcttataacataaacactcatcatgatgaaaaacttatgtataagctatttctatataaaaagatgaaataaagttaaatt 430461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 24476530 - 24476587
Alignment:
Q  70 atgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaatt 127  Q
    ||||||| ||||||||||||||||| || ||||||||||||||||||  |||||||||    
T  24476530 atgataaacacttatgtataagctatttctatagcaaaagataaaatgtagttaaatt 24476587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 9559681 - 9559617
Alignment:
Q  72 gataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgta 136  Q
    ||||||| |||||||||||| || || ||||||||||||||||||| | ||||||||| ||||||    
T  9559681 gataagcgcttatgtataagttatttctatagcaaaagataaaataaatttaaattgttttcgta 9559617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 23063716 - 23063624
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaat 116  Q
    |||||||| | ||||||||||||| ||||||  |||||   || |||||||||||  |||||||||| ||| |||||||||||||||| ||||    
T  23063716 gtttggattatcaacttatttgcatcttatagcacaaatgattatcatgataagcgtttatgtataacctatttttatagcaaaagatgaaat 23063624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 264253 - 264364
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtta 123  Q
    |||||||| |||| || ||||||| ||||||  ||||   ||| ||||||||||  ||||| ||||||||| || || |||||||||||||||| |||||    
T  264253 gtttggattaacagctaatttgcagcttatagcacaagtgcttatcatgataagtgcttatatataagctatttctaaagcaaaagataaaataaagtta 264352  T
Q  124 aattgtgttcgt 135  Q
    ||| || |||||    
T  264353 aatcgttttcgt 264364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 29274361 - 29274302
Alignment:
Q  80 cttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||||||||||| || ||||||||||||||||||| ||| ||||||| ||| |||||    
T  29274361 cttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataa 29274302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 6538389 - 6538458
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    ||||||||||| | |||||||||| ||||||  |||| ||||| | ||||||||| ||||||||||||||    
T  6538389 gtttggataaatagcttatttgcagcttatagcacaagcacttataatgataagcgcttatgtataagct 6538458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 35069434 - 35069518
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaa 108  Q
    |||| ||||||||||||||||||| ||||||  |||| |  || ||||||||||  |||||| |||||||| || ||||||||||    
T  35069434 gttttgataaacaacttatttgcagcttatagcacaagcgtttatcatgataagtgcttatgcataagctatttatatagcaaaa 35069518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 4163095 - 4163162
Alignment:
Q  62 cacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    ||||| ||||||||| ||||||   |||||||| |||||||| || |||||||||| |||||||||||    
T  4163095 cacttatcatgataaacacttacacataagctatttttatagaaatagataaaataaagttaaattgt 4163162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 4224716 - 4224783
Alignment:
Q  62 cacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    ||||| ||||||||| ||||||   |||||||| |||||||| || |||||||||| |||||||||||    
T  4224716 cacttatcatgataaacacttacacataagctatttttatagaaatagataaaataaagttaaattgt 4224783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 8147647 - 8147698
Alignment:
Q  87 ataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtata 138  Q
    |||||||| |||||||||||||||||||||| |||| |||||| || |||||    
T  8147647 ataagctatttttatagcaaaagataaaataaagttgaattgtttttgtata 8147698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 29249497 - 29249544
Alignment:
Q  206 tacaagtacttatgtcaatcaataagctcaaataagtcaatccaaaca 253  Q
    |||||||||||||  || | ||||||||||||||||||||||||||||    
T  29249497 tacaagtacttataacagtaaataagctcaaataagtcaatccaaaca 29249544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 119
Target Start/End: Original strand, 33416323 - 33416362
Alignment:
Q  80 cttatgtataagctaattttatagcaaaagataaaataca 119  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  33416323 cttatgtataagctatttttataacaaaagataaaataca 33416362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 33736758 - 33736833
Alignment:
Q  62 cacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtat 137  Q
    ||||| ||||||| |||||||||||||||| || || |||| || || |||||||| ||||||||||  |||||||    
T  33736758 cacttatcatgatcagcacttatgtataagttatttctataacataacataaaataaagttaaattgccttcgtat 33736833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 20671996 - 20671938
Alignment:
Q  81 ttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||||||||||||| || || | |||||||||||||| ||| ||||||| |||||||||    
T  20671996 ttatgtataagctatttctagatcaaaagataaaataaagtcaaattgttttcgtataa 20671938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 24836330 - 24836272
Alignment:
Q  81 ttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    ||||||||||| || || |||| |||||||||||||| ||| ||||||| |||||||||    
T  24836330 ttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataa 24836272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 28088180 - 28088138
Alignment:
Q  215 ttatgtcaatcaataagctcaaataagtcaatccaaacaggcc 257  Q
    |||| ||||| |||||||||||||||||| |||||||||||||    
T  28088180 ttatatcaataaataagctcaaataagtctatccaaacaggcc 28088138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 256
Target Start/End: Original strand, 103555 - 103584
Alignment:
Q  227 ataagctcaaataagtcaatccaaacaggc 256  Q
    ||||||||||||||||||||||||||||||    
T  103555 ataagctcaaataagtcaatccaaacaggc 103584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 507158 - 507235
Alignment:
Q  80 cttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa-ctatcttagagaactta 156  Q
    |||||||||||  || || |||| |||||||||||||| ||||| ||||| || |||||| ||||||| |||||||||    
T  507158 cttatgtataaattatttctataacaaaagataaaataaagttagattgtttttgtataagctatcttggagaactta 507235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 192
Target Start/End: Original strand, 1575960 - 1575989
Alignment:
Q  163 atgtcataagttgttttcataagttcttgc 192  Q
    ||||||||||||||||||||||||||||||    
T  1575960 atgtcataagttgttttcataagttcttgc 1575989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 8844794 - 8844749
Alignment:
Q  71 tgataagcacttatgtataagctaattttatagcaaaagataaaat 116  Q
    ||||||||||||||| |||| ||| |||||||||||| ||||||||    
T  8844794 tgataagcacttatgcataatctacttttatagcaaatgataaaat 8844749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 189
Target Start/End: Complemental strand, 9559546 - 9559517
Alignment:
Q  160 acaatgtcataagttgttttcataagttct 189  Q
    ||||||||||||||||||||||||||||||    
T  9559546 acaatgtcataagttgttttcataagttct 9559517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 21405113 - 21405072
Alignment:
Q  213 acttatgtcaatcaataagctcaaataagtcaatccaaacag 254  Q
    |||||||||| |  ||||||||||||||||||||||||||||    
T  21405113 acttatgtcagtatataagctcaaataagtcaatccaaacag 21405072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 30536928 - 30536880
Alignment:
Q  209 aagtacttatgtcaatcaataagctcaaataagtcaatccaaacaggcc 257  Q
    |||||||||||| | |  |||| ||||||||||||||||||||||||||    
T  30536928 aagtacttatgtaagtagataaactcaaataagtcaatccaaacaggcc 30536880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 39980610 - 39980668
Alignment:
Q  33 aacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataag 91  Q
    |||| |||||||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  39980610 aacagcttatttgcagcttataggacaaacacttatcatgataagcacttatgtataag 39980668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 8142898 - 8142805
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaata 117  Q
    |||| ||||||||||||||||| || |||||| ||||||| || | | ||||||   |||||||||||||| ||||||| ||||||||||||||    
T  8142898 gttttgataaacaacttatttgtaatttataacacaaacatttattacgataagtgtttatgtataagctatttttatatcaaaagataaaata 8142805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 34235264 - 34235164
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtta 123  Q
    |||||||||||||||||||||| | ||||||  |||    ||| |||||||||||||||||||| |||||| ||  ||||||||| |||||||| |||||    
T  34235264 gtttggataaacaacttatttgtagcttatagtacatgtgcttatcatgataagcacttatgtagaagctatttccatagcaaaatataaaataaagtta 34235165  T
Q  124 a 124  Q
    |    
T  34235164 a 34235164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 35328350 - 35328237
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtta 123  Q
    ||||||||||| | |||||||||| |||||| ||||| | ||| | |||||||||||||||||| || ||| |  ||||||||| ||| ||||| |||||    
T  35328350 gtttggataaatagcttatttgcagcttata-gacaagcgcttattatgataagcacttatgtacaacctattactatagcaaaggat-aaataaagtta 35328253  T
Q  124 aattgtgttcgtataa 139  Q
    |||||| |||||||||    
T  35328252 aattgttttcgtataa 35328237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 25447430 - 25447317
Alignment:
Q  26 ttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaa 125  Q
    |||||||||||  |||| |||| ||||||| |||| | ||| |||||| |||||||| ||| ||| ||| || ||||| ||||||||||||| | |||||    
T  25447430 ttggataaacagtttatgtgcagcttataacacaagcgcttatcatgagaagcacttttgtgtaaactatttctatagtaaaagataaaataaacttaaa 25447331  T
Q  126 ttgtgttcgtataa 139  Q
    |||| || ||||||    
T  25447330 ttgtttttgtataa 25447317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 26990678 - 26990609
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    |||||||| |||||||||| |||||||||||| |||| |||||   |||||||||||||||| |||||||    
T  26990678 gtttggatcaacaacttatatgcaacttataacacaagcacttacaatgataagcacttatgaataagct 26990609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 28796025 - 28795961
Alignment:
Q  29 gataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    |||||||||||||||| || ||||||  ||||||| || ||||||||| ||||||||||||||||    
T  28796025 gataaacaacttatttacagcttatagcacaaacatttatcatgataaacacttatgtataagct 28795961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 44061162 - 44061106
Alignment:
Q  73 ataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    |||||||||| ||||||||||| || |||||||||||||||||||  ||||||||||    
T  44061162 ataagcacttctgtataagctatttctatagcaaaagataaaataaggttaaattgt 44061106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 24085513 - 24085458
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagca 79  Q
    |||||||||||||||||||||||| |||| || |||||||||| ||||| ||||||    
T  24085513 gtttggataaacaacttatttgcagcttagaatacaaacacttatcatgttaagca 24085458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 34638116 - 34638037
Alignment:
Q  61 acacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaa-tacagttaaattgtgttcgtataa 139  Q
    |||||| ||||||||| | ||||| ||||||||| || ||||| ||||||||||| || ||||||||||| |||||||||    
T  34638116 acacttatcatgataaccgcttatatataagctatttctatagaaaaagataaaattaaagttaaattgttttcgtataa 34638037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 47132249 - 47132308
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcactta 83  Q
    ||||||||||||||||||||| || ||||||  |||| ||||| ||||||||||||||||    
T  47132249 gtttggataaacaacttattttcaccttatagcacaagcacttatcatgataagcactta 47132308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 255
Target Start/End: Complemental strand, 9832714 - 9832672
Alignment:
Q  213 acttatgtcaatcaataagctcaaataagtcaatccaaacagg 255  Q
    |||||||||||| |||||||||||||||||||||| |||||||    
T  9832714 acttatgtcaataaataagctcaaataagtcaatctaaacagg 9832672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 39979328 - 39979386
Alignment:
Q  33 aacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataag 91  Q
    ||||| ||||||||||||||||| |||||||||  ||||||||| ||||| ||||||||    
T  39979328 aacaatttatttgcaacttataacacaaacactcatcatgataaacacttgtgtataag 39979386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 1508779 - 1508710
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    ||||||| ||||| |||||||||||||||||  ||||   ||| ||||||||||| ||||||||||||||    
T  1508779 gtttggaaaaacagcttatttgcaacttatagcacaagtgcttatcatgataagcgcttatgtataagct 1508710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 35959654 - 35959585
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    ||||||||||||| |||||||||| ||||||  |||| | ||| ||||||||||  ||||||||||||||    
T  35959654 gtttggataaacagcttatttgcagcttatatcacaagctcttatcatgataagagcttatgtataagct 35959585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 46778413 - 46778356
Alignment:
Q  36 aacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    |||||||||||| ||||||  |||||||||| ||||||||||| ||||||||| ||||    
T  46778413 aacttatttgcaccttatagtacaaacacttatcatgataagcgcttatgtatcagct 46778356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 2128382 - 2128334
Alignment:
Q  81 ttatgtataagctaattttatagcaaaagataaaatacagttaaattgt 129  Q
    |||||||||||||| || |||| |||||||||||||| |||||||||||    
T  2128382 ttatgtataagctatttctataacaaaagataaaataaagttaaattgt 2128334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 42809242 - 42809298
Alignment:
Q  83 atgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||||||||||| || |||| |||||||||||||| ||||||||||| ||| |||||    
T  42809242 atgtataagctatttctataacaaaagataaaatatagttaaattgttttcatataa 42809298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 45541636 - 45541725
Alignment:
Q  163 atgtcataagttgttttcataagttcttgcaaagaatctcacatacaagtacttatgtcaatcaataagctcaaataagtcaatccaaacaggc 256  Q
    |||||||||| |||||||||||||||||  ||| | |||    |||||||  ||||  || | |||||||||||||||||||||||||||||||    
T  45541636 atgtcataagctgttttcataagttcttctaaacagtct----tacaagtgtttataccattaaataagctcaaataagtcaatccaaacaggc 45541725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 402721 - 402615
Alignment:
Q  32 aaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgt 131  Q
    |||||||||||||||| || |||  ||||   ||| ||||||||||  ||||||||||||||| || ||||| ||||||| || || | ||||||||| |    
T  402721 aaacaacttatttgcagctcatagcacaagtgcttatcatgataagggcttatgtataagctatttctatagaaaaagat-aattaaatttaaattgttt 402623  T
Q  132 tcgtataa 139  Q
    ||||||||    
T  402622 tcgtataa 402615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 30956751 - 30956700
Alignment:
Q  87 ataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtata 138  Q
    |||||||| || ||||||||||||||||||| ||||||||||| || |||||    
T  30956751 ataagctatttctatagcaaaagataaaataaagttaaattgtttttgtata 30956700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 30972563 - 30972512
Alignment:
Q  87 ataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtata 138  Q
    |||||||| || ||||||||||||||||||| ||||||||||| || |||||    
T  30972563 ataagctatttctatagcaaaagataaaataaagttaaattgtttttgtata 30972512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 31403284 - 31403355
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||| |||||||||||| ||||||||| ||  ||| |||||||||||||  ||||||| ||| |||||||||    
T  31403284 tcatcataagcacttatatataagctatttccatatcaaaagataaaatgaagttaaaatgttttcgtataa 31403355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 14145854 - 14145908
Alignment:
Q  84 tgtataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtata 138  Q
    ||||||||| | ||||||| || ||||||||||| ||||||||||| ||||||||    
T  14145854 tgtataagcaagttttataacagaagataaaataaagttaaattgttttcgtata 14145908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 255
Target Start/End: Complemental strand, 16073000 - 16072958
Alignment:
Q  213 acttatgtcaatcaataagctcaaataagtcaatccaaacagg 255  Q
    |||||||||| |  |||||||||||||||||||||||||||||    
T  16073000 acttatgtcattagataagctcaaataagtcaatccaaacagg 16072958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 30574101 - 30574002
Alignment:
Q  24 gtttggataaacaactta-tttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtt 122  Q
    ||||||||||||| | || |||||| ||||||  | || || || ||||||||||| ||||||||||||||| || ||||  ||||||||||||| ||||    
T  30574101 gtttggataaacaccataatttgcagcttatatcataagcatttatcatgataagcgcttatgtataagctatttctata--aaaagataaaataaagtt 30574004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 31365467 - 31365401
Alignment:
Q  27 tggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    |||||||||| |||||||||| ||||||  ||||    || ||||||||||||||||||||||||||    
T  31365467 tggataaacagcttatttgcagcttatagcacaagtgattatcatgataagcacttatgtataagct 31365401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 44747590 - 44747489
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagtta 123  Q
    ||||||||||| | |||||||||||||||||| |||| ||| |  |||| ||||  |||||||||||| || || || ||||| || ||||||| |||||    
T  44747590 gtttggataaatagcttatttgcaacttataacacaagcacctaccatggtaagttcttatgtataagttatttctacagcaagaggtaaaata-agtta 44747492  T
Q  124 aat 126  Q
    |||    
T  44747491 aat 44747489  T

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Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 46778207 - 46778169
Alignment:
Q  151 aacttatgtacaatgtcataagttgttttcataagttct 189  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  46778207 aacttatgaaaaatgtcataagttgttttcataagttct 46778169  T

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Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 49465813 - 49465751
Alignment:
Q  62 cacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaa 124  Q
    ||||| |||||| || | ||||||| ||||||| ||||||| |||||||||||||| ||||||    
T  49465813 cacttatcatgagaaacgcttatgtgtaagctatttttataacaaaagataaaataaagttaa 49465751  T

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Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 257
Target Start/End: Original strand, 51929866 - 51929896
Alignment:
Q  227 ataagctcaaataagtcaatccaaacaggcc 257  Q
    |||||||||||||||||||||||||||||||    
T  51929866 ataagctcaaataagtcaatccaaacaggcc 51929896  T

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Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 52597591 - 52597660
Alignment:
Q  44 tgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaa 114  Q
    |||| ||||||| |||| ||||| |||||||| |||||||||||||||||| ||  |||| ||||||||||    
T  52597591 tgcagcttataacacaagcacttatcatgata-gcacttatgtataagctatttccatagtaaaagataaa 52597660  T

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Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 849554 - 849595
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacact 65  Q
    |||||||||||||||||||||||| ||||||  |||||||||    
T  849554 gtttggataaacaacttatttgcagcttatagcacaaacact 849595  T

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Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 2719341 - 2719410
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    ||||| ||||||| ||||||| || ||||||  |||||| ||| |||||||||||||||| | |||||||    
T  2719341 gtttgaataaacagcttatttacagcttatagcacaaacgcttatcatgataagcacttacgcataagct 2719410  T

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Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 2923584 - 2923629
Alignment:
Q  208 caagtacttatgtcaatcaataagctcaaataagtcaatccaaaca 253  Q
    |||||||||||||||||  |||||||| ||||||||||||| ||||    
T  2923584 caagtacttatgtcaatagataagctcgaataagtcaatccgaaca 2923629  T

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Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 5436128 - 5436165
Alignment:
Q  153 cttatgtacaatgtcataagttgttttcataagttctt 190  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  5436128 cttatgaacaatgtcataagttgttttcagaagttctt 5436165  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 28240213 - 28240298
Alignment:
Q  29 gataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagctaattttatagcaaaagataaa 114  Q
    |||||||||||||| |||| ||||||  |||| | ||| ||||||||||  ||||| | ||||||| ||  |||||||||||||||    
T  28240213 gataaacaacttatctgcagcttatagcacaagcgcttatcatgataagtgcttatatttaagctatttcgatagcaaaagataaa 28240298  T

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Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 29520664 - 29520607
Alignment:
Q  36 aacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    ||||| |||||| ||||||  | |||||||| |||| |||||||||||||||||||||    
T  29520664 aacttttttgcagcttatagcataaacacttatcataataagcacttatgtataagct 29520607  T

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Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 30956824 - 30956755
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    ||||||||||||| |||||||||| ||||||  ||||   ||| |||||||||||| ||||| |||||||    
T  30956824 gtttggataaacagcttatttgcagcttatagcacaagggcttatcatgataagcatttatgcataagct 30956755  T

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Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 30972636 - 30972567
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtataagct 93  Q
    ||||||||||||| |||||||||| ||||||  ||||   ||| |||||||||||| ||||| |||||||    
T  30972636 gtttggataaacagcttatttgcagcttatagcacaagggcttatcatgataagcatttatgcataagct 30972567  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 34034043 - 34034104
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatg 85  Q
    ||||||||||||||||||||| || ||||||  |||  | ||| ||||||||||||||||||    
T  34034043 gtttggataaacaacttattttcagcttatagaacaggcgcttatcatgataagcacttatg 34034104  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 189
Target Start/End: Original strand, 37389246 - 37389275
Alignment:
Q  160 acaatgtcataagttgttttcataagttct 189  Q
    ||||||||||||||||||||||||||||||    
T  37389246 acaatgtcataagttgttttcataagttct 37389275  T

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Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 46030914 - 46030971
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaa 125  Q
    ||||||||| ||||||| ||||||||| ||  |||| ||||||||||||| |||||||    
T  46030914 tcatgataaacacttatatataagctatttcgatagaaaaagataaaataaagttaaa 46030971  T

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Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 49034379 - 49034346
Alignment:
Q  96 ttttatagcaaaagataaaatacagttaaattgt 129  Q
    ||||||||||||||||||||||| ||||||||||    
T  49034379 ttttatagcaaaagataaaataccgttaaattgt 49034346  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 15304472 - 15304420
Alignment:
Q  87 ataagctaattttatagcaaaagataaaatacagttaaattgtgttcgtataa 139  Q
    |||||||| || |||| |||||||||||||| ||||||||||| ||| |||||    
T  15304472 ataagctatttctataacaaaagataaaataaagttaaattgttttcatataa 15304420  T

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Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 23808192 - 23808140
Alignment:
Q  71 tgataagcacttatgtataagctaattttatagcaaaagataaaatacagtta 123  Q
    ||||| |||||||||||||||||| ||||||| ||| || ||||||| |||||    
T  23808192 tgataggcacttatgtataagctatttttataacaataggtaaaataaagtta 23808140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 30669101 - 30669065
Alignment:
Q  81 ttatgtataagctaattttatagcaaaagataaaata 117  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  30669101 ttatgtataagctatttttataacaaaagataaaata 30669065  T

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Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 32582261 - 32582309
Alignment:
Q  68 tcatgataagcacttatgtataagctaattttatagcaaaagataaaat 116  Q
    |||||| |||| | ||| ||||||||| |||||||||||||||||||||    
T  32582261 tcatgacaagctcatatttataagctatttttatagcaaaagataaaat 32582309  T

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Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 254
Target Start/End: Complemental strand, 35625056 - 35625020
Alignment:
Q  218 tgtcaatcaataagctcaaataagtcaatccaaacag 254  Q
    |||||||  ||||||||||||||||||||||||||||    
T  35625056 tgtcaatatataagctcaaataagtcaatccaaacag 35625020  T

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Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 255
Target Start/End: Complemental strand, 49845485 - 49845457
Alignment:
Q  227 ataagctcaaataagtcaatccaaacagg 255  Q
    |||||||||||||||||||||||||||||    
T  49845485 ataagctcaaataagtcaatccaaacagg 49845457  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 58476 - 58540
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataagcacttatgtat 88  Q
    |||||||||||||||||||||||| |||| |  ||||   |||||||| ||||||||||||||||    
T  58476 gtttggataaacaacttatttgcagcttagagcacaagtgcttgtcataataagcacttatgtat 58540  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 157979 - 158031
Alignment:
Q  24 gtttggataaacaacttatttgcaacttataagacaaacacttgtcatgataa 76  Q
    ||||||||||||| |||||||||| ||||||  |||||||||| | |||||||    
T  157979 gtttggataaacagcttatttgcagcttatagcacaaacacttatgatgataa 158031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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