View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13059_high_29 (Length: 267)
Name: NF13059_high_29
Description: NF13059
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13059_high_29 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 13 - 249
Target Start/End: Complemental strand, 36940108 - 36939872
Alignment:
| Q |
13 |
gagatatacctatagagcttcagccccaagtcatttctcttagttaaggacatcttatccaagcttggcaaatgggcaggcagtcgaatcgaacctcatt |
112 |
Q |
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| T |
36940108 |
gagatatacctatagagcttcagccccaagtcatttctcttagttaaggacatcttatccaagcttggcaaatgggcaggcagtcgaatagaacctcatt |
36940009 |
T |
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| Q |
113 |
aaagaaaggaaactccttattcccaggccctcccaaagtctgccttgaagaggaagtttctattcaatctatagctatcaaataaatcacatatatattc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36940008 |
aaagaaaggaaactccttattcccaggccctcccaaagtctgccttgaagaggaagtttctattcaatctatagctatcaaataaatcacatatatattc |
36939909 |
T |
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| Q |
213 |
tcttgggaagaagagacacacacatgtggtaggaagg |
249 |
Q |
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||||||||||||||||||||||||||||||| ||||| |
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| T |
36939908 |
tcttgggaagaagagacacacacatgtggtaagaagg |
36939872 |
T |
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