View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13059_high_34 (Length: 237)

Name: NF13059_high_34
Description: NF13059
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13059_high_34
NF13059_high_34
[»] chr5 (37 HSPs)
chr5 (10-237)||(40452139-40452366)
chr5 (102-177)||(42646855-42646930)
chr5 (99-176)||(12425508-12425585)
chr5 (99-182)||(9202798-9202881)
chr5 (99-177)||(39105401-39105479)
chr5 (60-125)||(34160629-34160694)
chr5 (99-166)||(706400-706467)
chr5 (102-177)||(36796761-36796836)
chr5 (102-177)||(42583089-42583164)
chr5 (101-167)||(35135727-35135793)
chr5 (163-208)||(3520648-3520693)
chr5 (103-172)||(14932231-14932299)
chr5 (99-152)||(39248037-39248090)
chr5 (99-167)||(1465084-1465152)
chr5 (99-174)||(6593237-6593311)
chr5 (163-206)||(16457935-16457978)
chr5 (135-174)||(29845493-29845532)
chr5 (108-163)||(29935418-29935473)
chr5 (107-166)||(35446000-35446059)
chr5 (99-174)||(42569038-42569113)
chr5 (104-177)||(1619034-1619105)
chr5 (102-152)||(4014504-4014554)
chr5 (162-228)||(35445778-35445844)
chr5 (106-167)||(3566383-3566444)
chr5 (100-177)||(4855636-4855713)
chr5 (164-237)||(9107162-9107235)
chr5 (163-228)||(10640024-10640089)
chr5 (163-208)||(11064737-11064782)
chr5 (179-228)||(12425660-12425709)
chr5 (171-228)||(15015922-15015979)
chr5 (163-228)||(16937817-16937882)
chr5 (100-177)||(34736582-34736658)
chr5 (99-152)||(37112338-37112391)
chr5 (163-208)||(39248169-39248214)
chr5 (99-152)||(40048360-40048413)
chr5 (132-187)||(42569601-42569653)
chr5 (60-104)||(7319165-7319209)
[»] chr4 (40 HSPs)
chr4 (60-182)||(25885757-25885879)
chr4 (102-177)||(3155543-3155618)
chr4 (60-174)||(27043888-27044002)
chr4 (99-228)||(49003976-49004103)
chr4 (112-177)||(1407906-1407971)
chr4 (105-177)||(49219082-49219154)
chr4 (164-208)||(49940121-49940165)
chr4 (113-177)||(51630062-51630126)
chr4 (99-177)||(24160927-24161005)
chr4 (100-177)||(40174503-40174578)
chr4 (99-152)||(7601696-7601749)
chr4 (163-228)||(21731590-21731655)
chr4 (163-228)||(54426114-54426179)
chr4 (163-227)||(1706693-1706757)
chr4 (125-177)||(34213641-34213692)
chr4 (107-182)||(3070023-3070098)
chr4 (157-228)||(18815088-18815159)
chr4 (113-176)||(39137488-39137551)
chr4 (168-207)||(50681044-50681083)
chr4 (130-177)||(52746895-52746942)
chr4 (103-177)||(17884009-17884083)
chr4 (99-173)||(23503496-23503570)
chr4 (99-141)||(25487636-25487678)
chr4 (100-174)||(26520287-26520361)
chr4 (131-173)||(37864011-37864053)
chr4 (102-152)||(49803151-49803201)
chr4 (100-174)||(54392877-54392950)
chr4 (163-200)||(4071948-4071985)
chr4 (163-228)||(17822799-17822864)
chr4 (113-174)||(22666439-22666500)
chr4 (163-208)||(39603124-39603169)
chr4 (163-228)||(39691083-39691148)
chr4 (100-177)||(56480286-56480363)
chr4 (105-177)||(3175894-3175966)
chr4 (60-120)||(4212814-4212874)
chr4 (113-169)||(22661960-22662016)
chr4 (113-177)||(23459579-23459643)
chr4 (113-153)||(29912900-29912940)
chr4 (169-237)||(39137581-39137649)
chr4 (99-147)||(44138496-44138544)
[»] chr1 (57 HSPs)
chr1 (60-200)||(36070147-36070288)
chr1 (113-177)||(9656601-9656665)
chr1 (60-165)||(34619445-34619551)
chr1 (163-228)||(2295167-2295232)
chr1 (104-177)||(49517012-49517085)
chr1 (60-182)||(33527197-33527320)
chr1 (103-177)||(9572163-9572237)
chr1 (60-177)||(2294809-2294926)
chr1 (163-228)||(29904822-29904887)
chr1 (113-174)||(37769718-37769779)
chr1 (104-173)||(38578469-38578538)
chr1 (113-177)||(24915106-24915170)
chr1 (116-175)||(39658537-39658596)
chr1 (98-152)||(6976884-6976938)
chr1 (115-177)||(29128353-29128415)
chr1 (103-165)||(37841939-37842001)
chr1 (99-228)||(38116192-38116318)
chr1 (117-182)||(46423334-46423397)
chr1 (60-177)||(1432414-1432530)
chr1 (99-148)||(3887716-3887765)
chr1 (101-166)||(4256108-4256173)
chr1 (139-200)||(11217977-11218038)
chr1 (60-177)||(37842410-37842527)
chr1 (163-208)||(38001666-38001711)
chr1 (104-177)||(49557083-49557156)
chr1 (163-227)||(37517101-37517165)
chr1 (162-237)||(3233940-3234015)
chr1 (99-162)||(7028229-7028292)
chr1 (108-174)||(30191937-30192004)
chr1 (130-177)||(33204443-33204490)
chr1 (101-175)||(15565889-15565963)
chr1 (99-169)||(15687136-15687206)
chr1 (174-228)||(33204328-33204382)
chr1 (135-177)||(37295773-37295815)
chr1 (163-237)||(49938818-49938892)
chr1 (99-177)||(52286615-52286693)
chr1 (74-123)||(488913-488962)
chr1 (163-208)||(6557043-6557088)
chr1 (163-200)||(9572063-9572100)
chr1 (99-177)||(15361648-15361728)
chr1 (106-166)||(38170758-38170819)
chr1 (163-228)||(38247398-38247463)
chr1 (171-228)||(39976144-39976201)
chr1 (163-200)||(43371854-43371891)
chr1 (163-200)||(49692015-49692052)
chr1 (100-177)||(49888705-49888782)
chr1 (164-237)||(50644180-50644253)
chr1 (60-104)||(473038-473082)
chr1 (100-152)||(4445646-4445698)
chr1 (99-147)||(4549803-4549851)
chr1 (90-142)||(4768914-4768966)
chr1 (132-180)||(10809315-10809363)
chr1 (165-237)||(37617390-37617462)
chr1 (77-169)||(43722378-43722470)
chr1 (114-182)||(48064261-48064329)
chr1 (101-177)||(48830131-48830207)
chr1 (61-109)||(50725027-50725075)
[»] chr7 (35 HSPs)
chr7 (69-177)||(39907710-39907818)
chr7 (113-184)||(34083573-34083644)
chr7 (66-177)||(12110263-12110375)
chr7 (113-177)||(40689041-40689105)
chr7 (101-177)||(49060479-49060555)
chr7 (95-152)||(8960707-8960764)
chr7 (163-200)||(20526891-20526928)
chr7 (113-174)||(30180002-30180063)
chr7 (165-228)||(27863659-27863722)
chr7 (100-175)||(36874022-36874097)
chr7 (100-177)||(1432019-1432099)
chr7 (95-177)||(5628621-5628703)
chr7 (66-177)||(22296283-22296397)
chr7 (99-177)||(27548200-27548278)
chr7 (99-173)||(33673015-33673088)
chr7 (99-177)||(37832195-37832272)
chr7 (179-228)||(39907888-39907937)
chr7 (113-177)||(22283799-22283862)
chr7 (100-152)||(27121666-27121718)
chr7 (104-176)||(47177578-47177650)
chr7 (93-175)||(7453454-7453537)
chr7 (129-200)||(13960883-13960953)
chr7 (119-177)||(20526403-20526461)
chr7 (162-200)||(21568457-21568495)
chr7 (102-175)||(6824858-6824931)
chr7 (163-228)||(19302497-19302562)
chr7 (163-200)||(20526517-20526554)
chr7 (60-93)||(33128629-33128662)
chr7 (163-228)||(33601344-33601409)
chr7 (99-175)||(3610797-3610873)
chr7 (103-147)||(3968280-3968324)
chr7 (104-152)||(25599879-25599927)
chr7 (101-177)||(30496643-30496719)
chr7 (100-164)||(42656453-42656517)
chr7 (104-152)||(43152982-43153030)
[»] chr6 (23 HSPs)
chr6 (95-174)||(6654548-6654627)
chr6 (99-177)||(9093611-9093689)
chr6 (85-177)||(4006637-4006729)
chr6 (99-177)||(29274284-29274362)
chr6 (106-177)||(2735013-2735084)
chr6 (99-200)||(10452392-10452493)
chr6 (100-174)||(24476540-24476614)
chr6 (133-198)||(7485102-7485167)
chr6 (99-152)||(9559621-9559674)
chr6 (134-182)||(9604821-9604869)
chr6 (108-164)||(658518-658576)
chr6 (99-177)||(11340680-11340758)
chr6 (101-167)||(24836264-24836330)
chr6 (99-164)||(264308-264373)
chr6 (99-164)||(507157-507222)
chr6 (108-177)||(1402942-1403011)
chr6 (121-174)||(3785758-3785811)
chr6 (130-175)||(29296350-29296395)
chr6 (100-169)||(32206083-32206152)
chr6 (100-152)||(430456-430508)
chr6 (113-177)||(769090-769154)
chr6 (103-147)||(10645411-10645455)
chr6 (101-177)||(20671920-20671996)
[»] chr3 (36 HSPs)
chr3 (60-175)||(42747834-42747949)
chr3 (84-177)||(1395593-1395686)
chr3 (107-176)||(30956682-30956751)
chr3 (107-176)||(30972494-30972563)
chr3 (104-177)||(44061078-44061151)
chr3 (80-152)||(2128331-2128403)
chr3 (163-227)||(39980800-39980864)
chr3 (163-228)||(31365122-31365187)
chr3 (103-200)||(48397587-48397684)
chr3 (107-167)||(583991-584051)
chr3 (113-177)||(2719420-2719483)
chr3 (168-228)||(18405765-18405825)
chr3 (113-177)||(25447299-25447363)
chr3 (60-104)||(30956780-30956824)
chr3 (60-104)||(30972592-30972636)
chr3 (113-177)||(33405222-33405286)
chr3 (95-174)||(402600-402678)
chr3 (99-177)||(46886747-46886823)
chr3 (105-176)||(52618946-52619017)
chr3 (107-173)||(35959515-35959581)
chr3 (104-182)||(51510243-51510321)
chr3 (164-237)||(584118-584191)
chr3 (163-200)||(3776353-3776390)
chr3 (163-208)||(21367738-21367783)
chr3 (108-177)||(23952161-23952230)
chr3 (163-228)||(24085272-24085337)
chr3 (163-224)||(26878271-26878332)
chr3 (163-228)||(37689300-37689365)
chr3 (99-176)||(43079679-43079756)
chr3 (100-177)||(44014218-44014295)
chr3 (163-200)||(44014761-44014798)
chr3 (101-177)||(21367611-21367682)
chr3 (130-182)||(32555031-32555083)
chr3 (100-140)||(34759619-34759659)
chr3 (101-177)||(37788800-37788875)
chr3 (101-177)||(48364934-48365010)
[»] chr8 (44 HSPs)
chr8 (99-177)||(10114427-10114504)
chr8 (66-143)||(1929955-1930032)
chr8 (61-177)||(7514476-7514593)
chr8 (77-159)||(37152963-37153045)
chr8 (103-176)||(16210942-16211015)
chr8 (163-228)||(35534547-35534612)
chr8 (101-173)||(4558737-4558809)
chr8 (102-177)||(7918828-7918903)
chr8 (90-169)||(36337963-36338042)
chr8 (103-177)||(1470911-1470985)
chr8 (130-200)||(6526215-6526285)
chr8 (113-167)||(10758321-10758375)
chr8 (163-225)||(26771336-26771398)
chr8 (162-208)||(28763438-28763484)
chr8 (99-177)||(28769394-28769472)
chr8 (99-152)||(26215433-26215486)
chr8 (163-228)||(30251388-30251453)
chr8 (100-177)||(42597339-42597416)
chr8 (105-177)||(26820142-26820214)
chr8 (60-104)||(29819034-29819078)
chr8 (130-177)||(773297-773344)
chr8 (130-177)||(778357-778404)
chr8 (130-177)||(787791-787838)
chr8 (60-103)||(1058229-1058272)
chr8 (100-175)||(3936787-3936862)
chr8 (95-141)||(2698726-2698772)
chr8 (160-226)||(35749506-35749572)
chr8 (163-228)||(1058011-1058076)
chr8 (107-176)||(1058130-1058199)
chr8 (99-176)||(1112790-1112867)
chr8 (104-165)||(3537098-3537159)
chr8 (163-208)||(10758211-10758256)
chr8 (179-228)||(12497006-12497055)
chr8 (107-148)||(12976158-12976199)
chr8 (163-200)||(16162830-16162867)
chr8 (100-177)||(16163333-16163410)
chr8 (100-177)||(27049306-27049382)
chr8 (101-177)||(7646145-7646221)
chr8 (163-195)||(10120827-10120859)
chr8 (115-175)||(29168949-29169009)
chr8 (113-177)||(35374428-35374492)
chr8 (99-175)||(37353306-37353381)
chr8 (60-104)||(40981002-40981046)
chr8 (168-228)||(43717868-43717928)
[»] chr2 (39 HSPs)
chr2 (99-174)||(2416250-2416325)
chr2 (104-193)||(39567845-39567934)
chr2 (60-177)||(4026713-4026832)
chr2 (66-177)||(18066032-18066143)
chr2 (99-177)||(43199351-43199429)
chr2 (101-177)||(42457887-42457963)
chr2 (99-182)||(1646951-1647034)
chr2 (103-182)||(9395071-9395150)
chr2 (99-174)||(25609733-25609808)
chr2 (99-177)||(3102630-3102708)
chr2 (99-152)||(7043804-7043855)
chr2 (163-237)||(27317450-27317524)
chr2 (162-228)||(36534838-36534904)
chr2 (106-176)||(42907303-42907373)
chr2 (99-152)||(3611163-3611216)
chr2 (99-176)||(5133709-5133786)
chr2 (163-228)||(7928232-7928297)
chr2 (163-228)||(42659145-42659210)
chr2 (99-182)||(39621890-39621971)
chr2 (107-154)||(3932295-3932342)
chr2 (99-177)||(2142590-2142668)
chr2 (99-177)||(3673744-3673822)
chr2 (99-177)||(8017372-8017449)
chr2 (107-177)||(12464528-12464598)
chr2 (99-177)||(15377702-15377780)
chr2 (99-177)||(17952756-17952834)
chr2 (163-237)||(20952426-20952500)
chr2 (171-237)||(30331830-30331896)
chr2 (162-200)||(32837392-32837430)
chr2 (130-163)||(12313242-12313275)
chr2 (107-152)||(15305602-15305647)
chr2 (163-228)||(15757592-15757657)
chr2 (104-149)||(26143724-26143769)
chr2 (99-173)||(39341144-39341220)
chr2 (60-104)||(1633700-1633744)
chr2 (122-182)||(10494628-10494688)
chr2 (164-208)||(31744370-31744414)
chr2 (99-143)||(40682463-40682506)
chr2 (125-173)||(43199852-43199900)
[»] scaffold0019 (1 HSPs)
scaffold0019 (99-152)||(104214-104267)
[»] scaffold0549 (2 HSPs)
scaffold0549 (99-177)||(1779-1857)
scaffold0549 (99-177)||(3869-3947)
[»] scaffold0024 (2 HSPs)
scaffold0024 (100-162)||(21348-21410)
scaffold0024 (99-177)||(27513-27591)
[»] scaffold0018 (1 HSPs)
scaffold0018 (131-176)||(178381-178426)


Alignment Details
Target: chr5 (Bit Score: 216; Significance: 1e-119; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 40452139 - 40452366
Alignment:
Q  10 tcatcatccatgagtaaaccaacaaaagcaaatattcaggtttaaggctagtttgaataaacagcttatttgcagcttacagcaaaagggcttatgtata 109  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40452139 tcatcattcatgagtaaaccaacaaaagcaaatattcaggtttaaggctagtttgaataaacagcttatttgcagcttacagcaaaagggcttatgtata 40452238  T
Q  110 agatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcatcagttctctcaaacagtctcacacaacttatt 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40452239 agatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcatcagttctctcaaacagtctcacacaacttatt 40452338  T
Q  210 gcagtatataagctcaaatttgtcaatc 237  Q
    |||||||||||||||| || ||||||||    
T  40452339 gcagtatataagctcatatatgtcaatc 40452366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 177
Target Start/End: Original strand, 42646855 - 42646930
Alignment:
Q  102 tatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||||||||| |||| ||||  ||||||| |||||||||| |||| |||||||||||||| |||||||||    
T  42646855 tatgtataagatatttttataacaaaggataaaattaagttaaattgtttttgtttaagctataaggtgttttcat 42646930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 12425508 - 12425585
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttca 176  Q
    ||||||||||||  ||||| ||||| |||  |||||||||||||||||| |||| || ||||||||||||||||||||    
T  12425508 gcttatgtataaactatttatatagtaaaagataaaataaagttaaattgttttcgtataagctataagctgttttca 12425585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 9202881 - 9202798
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcatcagtt 182  Q
    |||||| |||||| ||||||| |||||||  |||||||||||||||||| ||||  | ||||| ||||||||||||||| ||||    
T  9202881 gcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagctgttttcataagtt 9202798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 39105401 - 39105479
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||||| |||||||||||| ||  || |||| |||||||||| |||| || |||||||||| ||||||||||    
T  39105401 gcttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataagctataatctgttttcat 39105479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 34160629 - 34160694
Alignment:
Q  60 gtttgaataaacagcttatttgcagcttacagcaaaagggcttatgtataagatatttctatagca 125  Q
    ||||| || ||||||| |||||||||||| |||| ||  |||||||||||||||||||||||||||    
T  34160629 gtttggattaacagctgatttgcagcttaaagcacaaatgcttatgtataagatatttctatagca 34160694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 706400 - 706467
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataa 166  Q
    ||||||||||||| ||||||||||| |||  |||||||| |||||||||||| | ||||||| |||||    
T  706400 gcttatgtataagctatttctatagtaaaagataaaatatagttaaattattcttgtttaagatataa 706467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 177
Target Start/End: Complemental strand, 36796836 - 36796761
Alignment:
Q  102 tatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||| |||||||  | |||| |||||||||| |||||||||||||    |||||||||||||||||||||    
T  36796836 tatgtataagttatttctgcaacaaaaaataaaataaggttaaattattttcacataagctataagctgttttcat 36796761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 177
Target Start/End: Original strand, 42583089 - 42583164
Alignment:
Q  102 tatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||| |||||||||| ||||  || ||||||||||||||| |||| || ||||  |||||||||||||||    
T  42583089 tatgtataaggtatttctataacaaaagatgaaataaagttaaattgttttcgtgtaagggataagctgttttcat 42583164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 35135793 - 35135727
Alignment:
Q  101 ttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataag 167  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||| ||||||  | |||||||||||    
T  35135793 ttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataag 35135727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 3520648 - 3520693
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttat 208  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||||||    
T  3520648 ataagatgttttcataagttctcccaaacagtctcacacaacttat 3520693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 14932231 - 14932299
Alignment:
Q  103 atgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgtt 172  Q
    ||||||||  ||||| |||||||||  |||||||||||||||||| |||| || ||||||||||||||||    
T  14932231 atgtataatctatttttatagcaaaagataaaataaagttaaattgtttt-gtataagctataagctgtt 14932299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 39248037 - 39248090
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    ||||||||| ||| ||||||||||||||||| ||||||||| ||||||| ||||    
T  39248037 gcttatgtaaaagctatttctatagcaaatactaaaataaatttaaattgtttt 39248090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 1465152 - 1465084
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataag 167  Q
    ||||||||||||| ||||||||||||| |  |||||||||||||||||   ||| || |||||||||||    
T  1465152 gcttatgtataagctatttctatagcataggataaaataaagttaaatcgcttttgtgtaagctataag 1465084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 6593237 - 6593311
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgtttt 174  Q
    ||||||||||||   ||||||||| ||||  ||||||||||||||||||||| | || || |||||||||||||||    
T  6593237 gcttatgtataaacaatttctataacaaaagataaaataaagttaaattattct-gtataggctataagctgtttt 6593311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 16457978 - 16457935
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaactt 206  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||    
T  16457978 ataagctgttttcataagttctcccaaacagtctcacaaaactt 16457935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 174
Target Start/End: Complemental strand, 29845532 - 29845493
Alignment:
Q  135 ataaagttaaattattttggtttaagctataagctgtttt 174  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  29845532 ataaagttatattattttggttcaagctataagctgtttt 29845493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 29935473 - 29935418
Alignment:
Q  108 taagatatttctatagcaaataataaaataaagttaaattattttggtttaagcta 163  Q
    |||| ||||||| ||||||| | |||||||||||||||||||||| || |||||||    
T  29935473 taagctatttctttagcaaaaagtaaaataaagttaaattatttttgtataagcta 29935418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 35446000 - 35446059
Alignment:
Q  107 ataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataa 166  Q
    ||||| ||||| |||||||||| |||||||||||||||||| |||| || || |||||||    
T  35446000 ataagctatttttatagcaaatgataaaataaagttaaattgtttttgtatacgctataa 35446059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 42569113 - 42569038
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgtttt 174  Q
    ||||||| | ||| |||||||||||||||  ||||||||||||  |||| |||| || |||||||||| |||||||    
T  42569113 gcttatgaaaaagctatttctatagcaaaagataaaataaagtctaattgttttcgtataagctataatctgtttt 42569038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 177
Target Start/End: Original strand, 1619034 - 1619105
Alignment:
Q  104 tgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||| |||||||| | |||| |||||  |||||||||||| |||  || |||||||||||||||||||||    
T  1619034 tgtataagctatttctaaaacaaaaaataa--taaagttaaattctttccgtataagctataagctgttttcat 1619105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 4014554 - 4014504
Alignment:
Q  102 tatgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    |||||||||| |||||||||||||||  |||||||||||||| ||| ||||    
T  4014554 tatgtataagctatttctatagcaaaagataaaataaagttagattgtttt 4014504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 35445844 - 35445778
Alignment:
Q  162 tataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    |||||||||||||||| | |||| ||||| ||||||||| |||||||  ||||| |||| |||||||    
T  35445844 tataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaat 35445778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 3566444 - 3566383
Alignment:
Q  106 tataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataag 167  Q
    |||||| |||||||||| | ||  | ||||||||||||||||||||| || |||||||||||    
T  3566444 tataagctatttctatacccaaagagaaaataaagttaaattatttttgtataagctataag 3566383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 4855636 - 4855713
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||| || ||||| |||| |||| ||||||||||||||||||| || |  | |||| |||||| |||||||||    
T  4855636 cttatgtattagctatttttataacaaaaaataaaataaagttaaattgttatcatataagttataagttgttttcat 4855713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 237
Target Start/End: Original strand, 9107162 - 9107235
Alignment:
Q  164 taagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaatttgtcaatc 237  Q
    |||||||||||||| ||||||| |||||| ||||||| |||||||  || || |||| |||||||  |||||||    
T  9107162 taagctgttttcatgagttctcccaaacattctcacaaaacttatgtcactagataaactcaaataagtcaatc 9107235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 10640024 - 10640089
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||||||||||| ||||||| |||||| | ||||| |||||||  ||||| |||| |||||||    
T  10640024 ataagctgttttcataagttctcccaaacaatatcacaaaacttatgtcagtagataaactcaaat 10640089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 11064737 - 11064782
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttat 208  Q
    ||||||| ||||||| |||||||||||||| ||||||| |||||||    
T  11064737 ataagctattttcataagttctctcaaacaatctcacaaaacttat 11064782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 12425660 - 12425709
Alignment:
Q  179 agttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||| |||||||||||||| |||||||  ||||| ||||||||||||    
T  12425660 agttctcccaaacagtctcacaaaacttatgacagtagataagctcaaat 12425709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 15015922 - 15015979
Alignment:
Q  171 ttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||| ||||||| |||||||||||||| | |||||  ||||| ||||||||||||    
T  15015922 ttttcataagttctcccaaacagtctcacaaagcttatgtcagtagataagctcaaat 15015979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 16937882 - 16937817
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||||||||||| ||||||  |||||| ||||||| |||||||   |||| ||||||||||||    
T  16937882 ataagctgttttcataagttcttccaaacactctcacaaaacttatgctagtagataagctcaaat 16937817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 34736658 - 34736582
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||| ||||| |||||||||||||||  | ||| ||||| ||||||||||| || |||||||||| ||||| ||||    
T  34736658 cttatgcataagctatttctatagcaaaagagaaa-taaagctaaattatttttgtataagctataaactgttatcat 34736582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 37112391 - 37112338
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    ||||||||||||| |||||||| ||||||  |||||| ||||||||||| ||||    
T  37112391 gcttatgtataagctatttctacagcaaaagataaaacaaagttaaattgtttt 37112338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 39248169 - 39248214
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttat 208  Q
    |||||||||||| || ||||||| |||||||||||||| |||||||    
T  39248169 ataagctgtttttataagttctcccaaacagtctcacaaaacttat 39248214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 40048413 - 40048360
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    ||||||||||||| | |||||||| ||||  |||||||||||||| ||||||||    
T  40048413 gcttatgtataagttgtttctataacaaaagataaaataaagttatattatttt 40048360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 42569653 - 42569601
Alignment:
Q  132 aaaataaagttaaattattttggtttaagctataagctgttttcatcagttctctc 187  Q
    |||||||||||||||| ||||   ||||| |||||||||||||||| |||||||||    
T  42569653 aaaataaagttaaattgtttt---ttaagttataagctgttttcataagttctctc 42569601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 7319209 - 7319165
Alignment:
Q  60 gtttgaataaacagcttatttgcagcttacagcaaaagggcttat 104  Q
    ||||||||||||||||||||| ||||||| |||| ||| ||||||    
T  7319209 gtttgaataaacagcttatttacagcttatagcacaagcgcttat 7319165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 182
Target Start/End: Original strand, 25885757 - 25885879
Alignment:
Q  60 gtttgaataaacagcttatttgcagcttacagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaa 159  Q
    ||||| ||||||| |||||||||||||||||||  ||   ||||||||| || | |||||||||||||  |||||||||||||||||| |||| || |||    
T  25885757 gtttggataaacaacttatttgcagcttacagcgcaaacacttatgtattagctctttctatagcaaaagataaaataaagttaaattgttttcgtgtaa 25885856  T
Q  160 gctataagctgttttcatcagtt 182  Q
    |||||||| ||||||||| ||||    
T  25885857 gctataagttgttttcataagtt 25885879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 177
Target Start/End: Original strand, 3155543 - 3155618
Alignment:
Q  102 tatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||| |||||||||||||||  |||||||||||||||||| |||| ||  |||||| |||||||||||||    
T  3155543 tatgtataagctatttctatagcaaaagataaaataaagttaaattgtttttgtacaagctacaagctgttttcat 3155618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 174
Target Start/End: Complemental strand, 27044002 - 27043888
Alignment:
Q  60 gtttgaataaacagcttatttgcagcttacagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaa 159  Q
    ||||| ||||||| ||||| | ||||||| ||||  || ||||||||||||| || || |||| ||||  |||||||||||||||||| |||| || |||    
T  27044002 gtttggataaacaacttatctacagcttatagcactagcgcttatgtataaggtacttatataacaaaggataaaataaagttaaattgttttcgtataa 27043903  T
Q  160 gctataagctgtttt 174  Q
    |||||||| ||||||    
T  27043902 gctataagatgtttt 27043888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 49004103 - 49003976
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcatcagttctctcaaacagtctca 198  Q
    |||||||||||||  ||||||||||||||  ||||||||  |||||||| |||| || | ||||||||  | ||||||| |||||||||||| |||||||    
T  49004103 gcttatgtataagcaatttctatagcaaaagataaaata--gttaaattgttttcgtattagctataacttattttcataagttctctcaaatagtctca 49004006  T
Q  199 cacaacttattgcagtatataagctcaaat 228  Q
    || ||||||    |||| ||||||||||||    
T  49004005 caaaacttaagctagtagataagctcaaat 49003976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 1407906 - 1407971
Alignment:
Q  112 atatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||||||||||||||||||| ||||||||| |||| || ||||||  |||||||||||||    
T  1407906 atatttctatagcaaataataaaatagagttaaattgtttttgtgtaagctgcaagctgttttcat 1407971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 49219082 - 49219154
Alignment:
Q  105 gtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||| |||||||||| ||||  |||||||||||| ||||||||||  | ||||||||||| |||||||||    
T  49219082 gtataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcat 49219154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 49940165 - 49940121
Alignment:
Q  164 taagctgttttcatcagttctctcaaacagtctcacacaacttat 208  Q
    |||||||||||||| |||||||||||||||||||||| |||||||    
T  49940165 taagctgttttcataagttctctcaaacagtctcacaaaacttat 49940121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 51630062 - 51630126
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||| |||||||||  |||||||||||||||||| ||||| | ||||||||||||| |||||||    
T  51630062 tatttatatagcaaaagataaaataaagttaaattgttttgatataagctataagctattttcat 51630126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 24160927 - 24161005
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||||| |||||||||| ||||  ||||||| |||||||||||||||  | || |||||||| ||| |||||    
T  24160927 gcttatgtataagctatttctataacaaaggataaaatcaagttaaattattttcatgtaggctataagttgtgttcat 24161005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 40174503 - 40174578
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||||| |||||  |||||||| |||||| |||||||||||| ||||  |  ||||||||||||||||||||    
T  40174503 cttatgtataagctattt--atagcaaaaaataaattaaagttaaattgttttcataaaagctataagctgttttcat 40174578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 7601696 - 7601749
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    ||||||||||||| |||| ||||||||||  |||||||||||||||||| ||||    
T  7601696 gcttatgtataagctattcctatagcaaaggataaaataaagttaaattgtttt 7601749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 21731655 - 21731590
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||||||||||| ||||||| |||||| ||||||| |||||||  ||||| ||| ||||||||    
T  21731655 ataagctgttttcataagttctcccaaacaatctcacaaaacttatgtcagtagatatgctcaaat 21731590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 54426114 - 54426179
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||||||||| | ||||||| ||| |||||||||| |||||||  ||||| ||||||||||||    
T  54426114 ataagctgttttcctaagttctcccaagcagtctcacaaaacttatgccagtagataagctcaaat 54426179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 1706693 - 1706757
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaa 227  Q
    ||||||||||||||| | ||||||||||| |||||||| |||||||  ||||| |||| ||||||    
T  1706693 ataagctgttttcataatttctctcaaaccgtctcacaaaacttatgtcagtagataaactcaaa 1706757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 34213692 - 34213641
Alignment:
Q  125 aaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||| ||||||||||||||||| |||||| | |||||||||||||||||||||    
T  34213692 aaatcataaaataaagttaaatcattttg-tataagctataagctgttttcat 34213641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 3070098 - 3070023
Alignment:
Q  107 ataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcatcagtt 182  Q
    ||||| ||||| |||| |||||||| |||||||||||| || |||||||  | |||| ||||||||||||| ||||    
T  3070098 ataagttatttttataacaaataatcaaataaagttaacttgttttggtacatgctacaagctgttttcataagtt 3070023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 18815088 - 18815159
Alignment:
Q  157 taagctataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||| ||||||||| || || |||||||||||||||||||||| |||||||   ||||  |||||||||||    
T  18815088 taagccataagctgtctttattagttctctcaaacagtctcacaaaacttatgctagtaggtaagctcaaat 18815159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 176
Target Start/End: Original strand, 39137488 - 39137551
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttca 176  Q
    ||||||||||||| |  |||||||||| || ||||||||| || |||||||||||| |||||||    
T  39137488 tatttctatagcataggataaaataaattttaattatttttgtataagctataagccgttttca 39137551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 207
Target Start/End: Complemental strand, 50681083 - 50681044
Alignment:
Q  168 ctgttttcatcagttctctcaaacagtctcacacaactta 207  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  50681083 ctgttttcataagttctctcaaacagtctcacaaaactta 50681044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 52746942 - 52746895
Alignment:
Q  130 ataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||||||||||| |||| || ||||| |||||||||||||||    
T  52746942 ataaaataaagttaaattgtttttgtgtaagccataagctgttttcat 52746895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 17884009 - 17884083
Alignment:
Q  103 atgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||| |||| |||||||||| ||||  |||||||||||||||||| |||| || |||| ||| || |||||||||    
T  17884009 atgtgtaagctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcat 17884083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 23503496 - 23503570
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttt 173  Q
    ||||||||||||  || ||||||| ||||  ||||||||||||||||||||||| ||  |||  |||||||||||    
T  23503496 gcttatgtataatctaattctataacaaaatataaaataaagttaaattatttttgtagaagacataagctgttt 23503570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 25487678 - 25487636
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagt 141  Q
    ||||||||||||| |||||||||| |||| |||||||||||||    
T  25487678 gcttatgtataagctatttctataacaaaaaataaaataaagt 25487636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 26520361 - 26520287
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgtttt 174  Q
    |||||||||||  | |||||||| ||||  || ||||||||||||||| |||| || ||||||||||||| ||||    
T  26520361 cttatgtataaactgtttctataacaaaagatgaaataaagttaaattgttttcgtgtaagctataagctatttt 26520287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 37864053 - 37864011
Alignment:
Q  131 taaaataaagttaaattattttggtttaagctataagctgttt 173  Q
    ||||||||||||||||| |||| ||||||| ||||||||||||    
T  37864053 taaaataaagttaaattgtttttgtttaagatataagctgttt 37864011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 49803151 - 49803201
Alignment:
Q  102 tatgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    |||||||||| |||||||||||||||  ||||||| |||||||||| ||||    
T  49803151 tatgtataagttatttctatagcaaaagataaaatgaagttaaattgtttt 49803201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 54392950 - 54392877
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgtttt 174  Q
    |||||||||||| ||||||||||  ||| |||||| |||||||||||| |||| || || ||||| |||||||||    
T  54392950 cttatgtataagctatttctataataaaaaataaa-taaagttaaattgtttttgtatatgctattagctgtttt 54392877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 4071948 - 4071985
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcaca 200  Q
    ||||||||||||||| || |||||||||||||||||||    
T  4071948 ataagctgttttcataagctctctcaaacagtctcaca 4071985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 17822864 - 17822799
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    |||||||||||||||  ||||||  ||| ||||||||| |||||||  ||||| ||||||||||||    
T  17822864 ataagctgttttcatatgttctcctaaatagtctcacagaacttatgtcagtagataagctcaaat 17822799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 22666439 - 22666500
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgtttt 174  Q
    |||||||||||||||  ||||||||||||| |||| |||  || ||||||||||||| ||||    
T  22666439 tatttctatagcaaaacataaaataaagttcaattttttacgtataagctataagctttttt 22666500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 39603169 - 39603124
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttat 208  Q
    ||||||||||||| | ||||||| |||||||||||||| |||||||    
T  39603169 ataagctgttttcctaagttctcccaaacagtctcacaaaacttat 39603124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 39691148 - 39691083
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||||||  ||| | |||||||||||||||||||| |||||||   |||| ||||||||||||    
T  39691148 ataagctgttcccataaattctctcaaacagtctcacaaaacttatgctagtagataagctcaaat 39691083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 56480286 - 56480363
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||| ||||||| |||||| ||| ||||  | |||||||||||||||| |||  || |||| ||||||||||||||||    
T  56480286 cttacgtataagctatttccataacaaaagacaaaataaagttaaattgtttatgtataagttataagctgttttcat 56480363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 3175894 - 3175966
Alignment:
Q  105 gtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||| || ||||||||||||  |||||||||||| ||||| ||||    |||| ||||||||||||||||    
T  3175894 gtataagctacttctatagcaaaagataaaataaagtcaaattgttttcaagtaagttataagctgttttcat 3175966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 4212814 - 4212874
Alignment:
Q  60 gtttgaataaacagcttatttgcagcttacagcaaaagggcttatgtataagatatttcta 120  Q
    ||||| ||||||| ||||||| ||||||| |||| ||| | ||||||||||| ||||||||    
T  4212814 gtttggataaacaacttattttcagcttatagcacaagcgattatgtataagctatttcta 4212874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 22661960 - 22662016
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttggtttaagctataagct 169  Q
    |||||||||||||||  ||||||||||||| |||| |||  || |||||||||||||    
T  22661960 tatttctatagcaaaacataaaataaagttcaattttttacgtataagctataagct 22662016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 23459579 - 23459643
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||| |||||||||  ||||||| ||||||| || ||||  | |||||||||||||||||||||    
T  23459579 tatttttatagcaaaagataaaatgaagttaagttgttttcttataagctataagctgttttcat 23459643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 29912900 - 29912940
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttg 153  Q
    ||||||||||||||| ||||||||||||| ||||| |||||    
T  29912900 tatttctatagcaaaaaataaaataaagtaaaattgttttg 29912940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 39137581 - 39137649
Alignment:
Q  169 tgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaatttgtcaatc 237  Q
    ||||||||| |||||||||  |||||||| || |||||| | ||||||||||||| ||||  |||||||    
T  39137581 tgttttcataagttctctctgacagtctcgcaaaacttacttcagtatataagctaaaataagtcaatc 39137649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 44138496 - 44138544
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaatt 147  Q
    ||||||||||||| | ||||||||||| |  ||||||||||||||||||    
T  44138496 gcttatgtataagctgtttctatagcagaagataaaataaagttaaatt 44138544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 9e-20; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 60 - 200
Target Start/End: Original strand, 36070147 - 36070288
Alignment:
Q  60 gtttgaataaacagctta-tttgcagcttacagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggttta 158  Q
    ||||| ||||||||| || ||||||||||| |||| ||| ||||||||||  | ||||| |||| ||||  |||||||||||||||||| | || |  ||    
T  36070147 gtttgtataaacagcctaatttgcagcttatagcataagcgcttatgtatgggctatttttataacaaaagataaaataaagttaaattgtcttcggata 36070246  T
Q  159 agctataagctgttttcatcagttctctcaaacagtctcaca 200  Q
    ||||||||| ||||||||| |||||||  |||||||||||||    
T  36070247 agctataagttgttttcataagttctcctaaacagtctcaca 36070288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 9656601 - 9656665
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||||||| ||||||||||||||||||||||||  | ||||||||||||||| |||||    
T  9656601 tatttctatagcaaaaaataaaataaagttaaattattttcatataagctataagctgtgttcat 9656665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 34619551 - 34619445
Alignment:
Q  60 gtttgaataaacagctta-tttgcagcttacagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggttta 158  Q
    ||||| |||||||||||| ||||||||||| |||| ||  |||||||||||||  ||||||||| ||||  ||||||||| |||||||| |||| || ||    
T  34619551 gtttggataaacagcttaatttgcagcttatagcataattgcttatgtataagccatttctataacaaaagataaaataaggttaaattgtttttgtata 34619452  T
Q  159 agctata 165  Q
    |||||||    
T  34619451 agctata 34619445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 2295167 - 2295232
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||||  ||||| ||||||||||||    
T  2295167 ataagctgttttcataagttctcccaaacagtctcacaaaacttatgccagtagataagctcaaat 2295232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 177
Target Start/End: Original strand, 49517012 - 49517085
Alignment:
Q  104 tgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||| |||||||||| ||||  |||||||||||| ||||| ||||  |||||||||||||||||||||||    
T  49517012 tgtataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcat 49517085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 182
Target Start/End: Complemental strand, 33527320 - 33527197
Alignment:
Q  60 gtttgaataaacagcttattt-gcagcttacagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggttta 158  Q
    ||||| ||||||||||||||| |||||||| |||| ||| ||||||| ||||| |||||||| | ||||  |||||||| ||| ||| | ||||  | ||    
T  33527320 gtttggataaacagcttattttgcagcttagagcataagcgcttatgaataagctatttctaaaacaaaagataaaatacagtcaaactgttttcatata 33527221  T
Q  159 agctataagctgttttcatcagtt 182  Q
    | ||||||||||||||||| ||||    
T  33527220 atctataagctgttttcataagtt 33527197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 9572237 - 9572163
Alignment:
Q  103 atgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||| || |||||||||||||||  ||||||||||||||||||  ||| || |||||||||||| ||||||||    
T  9572237 atgtattagctatttctatagcaaaagataaaataaagttaaattgcttttgtataagctataagccgttttcat 9572163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 177
Target Start/End: Original strand, 2294809 - 2294926
Alignment:
Q  60 gtttgaataaacagcttatttgcagcttacagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaa 159  Q
    ||||| || |||| ||||||||| |||||  ||| ||| ||||||| ||||| ||||| ||||| |||| || | ||||||||||||| |||| |  |||    
T  2294809 gtttggatgaacaacttatttgctgcttatggcataagcgcttatgaataaggtatttttataggaaatgatcatataaagttaaattgtttttggataa 2294908  T
Q  160 gctataagctgttttcat 177  Q
    |||||||||| |||||||    
T  2294909 gctataagctattttcat 2294926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 29904822 - 29904887
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    |||||||||||| || |||||||||||||||||||||| |||||||   |||| ||||||||||||    
T  29904822 ataagctgtttttataagttctctcaaacagtctcacaaaacttatgcaagtagataagctcaaat 29904887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 37769779 - 37769718
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgtttt 174  Q
    ||||| |||||||||| ||||||||||||||||||||||| ||||| |||| ||| ||||||    
T  37769779 tatttttatagcaaatgataaaataaagttaaattatttttgtttatgctacaagttgtttt 37769718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 38578469 - 38578538
Alignment:
Q  104 tgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttt 173  Q
    |||||||| |||||||||| ||||  |||| |||||||||||||||||| || ||||||||||| |||||    
T  38578469 tgtataagctatttctataacaaaagataacataaagttaaattatttttgtataagctataagttgttt 38578538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 24915170 - 24915106
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||||| |  |||||||||||||||||| |||| || || ||||||||||||||||||    
T  24915170 tatttctatagcagaagataaaataaagttaaattgtttttgtatatgctataagctgttttcat 24915106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 39658596 - 39658537
Alignment:
Q  116 ttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttc 175  Q
    ||||||||||||  ||||| ||||||||||||||||| || |||||||||||| ||||||    
T  39658596 ttctatagcaaaagataaagtaaagttaaattattttcgtataagctataagcagttttc 39658537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 6976884 - 6976938
Alignment:
Q  98 ggcttatgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    ||||||||||||||||||||||||| ||||  |||| ||||||||||| ||||||    
T  6976884 ggcttatgtataagatatttctataacaaaagataagataaagttaaactatttt 6976938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 29128415 - 29128353
Alignment:
Q  115 tttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||| ||||  ||||||||||||||| ||||||| |||||||||||||  |||||||||    
T  29128415 tttctataacaaaagataaaataaagttaatttattttcgtttaagctataaattgttttcat 29128353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 37841939 - 37842001
Alignment:
Q  103 atgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctata 165  Q
    ||||||||| |||| ||||| ||||| |||||||||||||||||| |||| || |||||||||    
T  37841939 atgtataagctattcctataacaaatgataaaataaagttaaattgttttcgtataagctata 37842001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 38116318 - 38116192
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcatcagttctctcaaacagtctca 198  Q
    ||||||||||||| |||||| |||||||| | |||||||  |||||||| | || || ||||||| ||| |||||| ||  ||||||||||| |||||||    
T  38116318 gcttatgtataagctatttcaatagcaaaga-taaaata--gttaaattgtgttcgtataagctagaagttgttttgataggttctctcaaatagtctca 38116222  T
Q  199 cacaacttattgcagtatataagctcaaat 228  Q
    || ||| |||   |||| ||||||||||||    
T  38116221 caaaacctatgctagtagataagctcaaat 38116192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 46423334 - 46423397
Alignment:
Q  117 tctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcatcagtt 182  Q
    ||||||||||| |||||||||  |||||||| ||||||  ||||||||||||||||||||| ||||    
T  46423334 tctatagcaaaaaataaaata--gttaaattgttttggcataagctataagctgttttcataagtt 46423397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 177
Target Start/End: Original strand, 1432414 - 1432530
Alignment:
Q  60 gtttgaataaacagcttatttgcagcttacagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaa 159  Q
    ||||| |||||||||||||| || ||||| |||| |||  | |||||||||| ||||||||||| |||  |||||||| |||| |||| ||||  | |||    
T  1432414 gtttggataaacagcttatt-gcggcttatagcataagcacatatgtataagctatttctatagtaaaagataaaatagagttcaattgtttttttataa 1432512  T
Q  160 gctataagctgttttcat 177  Q
    |||||||  |||||||||    
T  1432513 gctataaattgttttcat 1432530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 3887765 - 3887716
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaatta 148  Q
    ||||||||||||| |||||| ||||||||  |||||||||||||||||||    
T  3887765 gcttatgtataagctatttcaatagcaaaagataaaataaagttaaatta 3887716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 4256173 - 4256108
Alignment:
Q  101 ttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataa 166  Q
    ||||||||||| |||||||| | ||||  ||| ||||||||||||||||||| || ||||||||||    
T  4256173 ttatgtataagctatttctacaacaaaagatacaataaagttaaattattttcgtataagctataa 4256108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 11218038 - 11217977
Alignment:
Q  139 agttaaattattttggtttaagctataagctgttttcatcagttctctcaaacagtctcaca 200  Q
    ||||||||| |||| || ||||||||||| |||||||| |||||||| ||||| ||||||||    
T  11218038 agttaaattgttttcgtataagctataagttgttttcaccagttctcccaaaccgtctcaca 11217977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 177
Target Start/End: Complemental strand, 37842527 - 37842410
Alignment:
Q  60 gtttgaataaacagcttatttgcagcttacagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaa 159  Q
    |||| |||||||| |||||||| |||||| |||   |  || |||||||||| |||||||||||||||  || ||||||||||||| | | || |  |||    
T  37842527 gtttcaataaacaacttatttgaagcttatagcttgaatgcctatgtataagctatttctatagcaaaagatgaaataaagttaaactgtgttcgaataa 37842428  T
Q  160 gctataagctgttttcat 177  Q
    |||||||| |||||||||    
T  37842427 gctataagttgttttcat 37842410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 38001666 - 38001711
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttat 208  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||||    
T  38001666 ataagctgttttcataagttctcccaaacagtctcacaaaacttat 38001711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 177
Target Start/End: Original strand, 49557083 - 49557156
Alignment:
Q  104 tgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||| |||||||||| ||||  |||||||||||||||||  | ||  ||||||||||||| |||||||||    
T  49557083 tgtataagttatttctataacaaaagataaaataaagttaaatagtattcatttaagctataagttgttttcat 49557156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 37517165 - 37517101
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaa 227  Q
    ||||||||||||| | |||||| ||| ||||||||||| |||||||   ||||||||||||||||    
T  37517165 ataagctgttttcgtaagttctttcatacagtctcacaaaacttatgcaagtatataagctcaaa 37517101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 3234015 - 3233940
Alignment:
Q  162 tataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaatttgtcaatc 237  Q
    |||||| ||||||||| ||||||| | |||||||||||| ||||||  ||| || ||||||||||||  |||||||    
T  3234015 tataagttgttttcataagttctccctaacagtctcacaaaacttacggcactagataagctcaaataagtcaatc 3233940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 7028229 - 7028292
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagct 162  Q
    ||||||||||||  |||||||||||||||  ||||||||||||||| || |||| || ||||||    
T  7028229 gcttatgtataaactatttctatagcaaaagataaaataaagttaagttgtttttgtataagct 7028292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 30191937 - 30192004
Alignment:
Q  108 taagatatttctatagcaaataataaaataaagttaaattattttg-gtttaagctataagctgtttt 174  Q
    |||| ||||| ||||||||| |||||||||||||||| |||||||| |  || |||||||||||||||    
T  30191937 taagctatttttatagcaaaaaataaaataaagttaatttattttgtgcatatgctataagctgtttt 30192004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 33204490 - 33204443
Alignment:
Q  130 ataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||||||| ||||||| || |||||| ||||||||||||||    
T  33204490 ataaaataaagttaatttattttcgtataagctgtaagctgttttcat 33204443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 15565963 - 15565889
Alignment:
Q  101 ttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttc 175  Q
    |||||||||  ||||||| | ||||||  |||||||||||| ||| |||||| || ||| |||||||||||||||    
T  15565963 ttatgtatataatatttccaaagcaaaagataaaataaagtcaaactatttttgtataaactataagctgttttc 15565889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 15687206 - 15687136
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagct 169  Q
    ||||| ||| ||| |||||||||| ||||  |||||||||||||||||| |||| || ||||||| |||||    
T  15687206 gcttaagtacaagctatttctataacaaaatataaaataaagttaaattgttttcgtataagctacaagct 15687136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 33204382 - 33204328
Alignment:
Q  174 tcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    |||| ||||||| |||||||||||||| |||||||  ||||| ||||||||||||    
T  33204382 tcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctcaaat 33204328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 37295815 - 37295773
Alignment:
Q  135 ataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||||| |||| |||||||||||||| |||||||||    
T  37295815 ataaagttaaattgttttcgtttaagctataagttgttttcat 37295773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 49938818 - 49938892
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaatttgtcaatc 237  Q
    ||||||||||||||| ||||||| |||||| ||||||| |||||||  ||  |||||| |||||||  |||||||    
T  49938818 ataagctgttttcataagttctcccaaacaatctcacaaaacttatgccacgatataaactcaaataagtcaatc 49938892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 52286615 - 52286693
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||| |||||||||||||| | ||||  ||||||||||||||||  |||||  | |||||||||| || |||||||    
T  52286615 gcttatgaataagatatttctacaacaaaagataaaataaagttaaacaattttcatataagctataaactattttcat 52286693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 488913 - 488962
Alignment:
Q  74 cttatttgcagcttacagcaaaagggcttatgtataagatatttctatag 123  Q
    |||||||| |||||| |||| ||| ||||||||||||| |||||||||||    
T  488913 cttatttgaagcttatagcacaagtgcttatgtataagctatttctatag 488962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 6557043 - 6557088
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttat 208  Q
    ||||||| ||||||| |||||||||||| ||||||||| |||||||    
T  6557043 ataagctattttcataagttctctcaaatagtctcacaaaacttat 6557088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 9572100 - 9572063
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcaca 200  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  9572100 ataagctgttttcataagttctcccaaacagtctcaca 9572063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 15361648 - 15361728
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataa--taaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||| |||  |||||||||| |||| ||  |||| |||||| ||||||||||  | |||||||||||||||||||||    
T  15361648 gcttatgtgtaaactatttctataacaaagaagataaagtaaagtcaaattattttcatataagctataagctgttttcat 15361728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 38170819 - 38170758
Alignment:
Q  106 tataagatatttctatagcaaataataaaataaa-gttaaattattttggtttaagctataa 166  Q
    ||||||||||||||| | ||||  |||||||||| ||||||||||||| || ||||||||||    
T  38170819 tataagatatttctacaacaaaagataaaataaaagttaaattattttcgtataagctataa 38170758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 38247398 - 38247463
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||||||||||| ||||||| ||||||||  |||| |||||||  ||||| ||||| ||||||    
T  38247398 ataagctgttttcataagttctcccaaacagtgacacaaaacttatgccagtagataagttcaaat 38247463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 39976201 - 39976144
Alignment:
Q  171 ttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||| |||||||||||||||| ||||| |||||||  ||||| |||| |||||||    
T  39976201 ttttcataagttctctcaaacagtttcacaaaacttatgtcagtagataatctcaaat 39976144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 43371891 - 43371854
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcaca 200  Q
    ||||||||||||||| || |||||||||||||||||||    
T  43371891 ataagctgttttcataagctctctcaaacagtctcaca 43371854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 49692052 - 49692015
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcaca 200  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  49692052 ataagctattttcataagttctctcaaacagtctcaca 49692015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 49888705 - 49888782
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||||| ||||||| | | |||  ||||||||||||| |||| |||| || |||||||| || |||||||||    
T  49888705 cttatgtataagctatttctttggaaaaagataaaataaagtttaattgttttcgtataagctattagttgttttcat 49888782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 50644253 - 50644180
Alignment:
Q  164 taagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaatttgtcaatc 237  Q
    |||| ||||||||| ||||||| |||||||||||||| ||| |||   |||| ||||||||||||  |||||||    
T  50644253 taagttgttttcataagttctcccaaacagtctcacaaaacatatgttagtagataagctcaaataagtcaatc 50644180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 473038 - 473082
Alignment:
Q  60 gtttgaataaacagcttatttgcagcttacagcaaaagggcttat 104  Q
    ||||| ||||||| ||||||||||||||||| |||||| ||||||    
T  473038 gtttggataaacaacttatttgcagcttacaacaaaagcgcttat 473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 4445646 - 4445698
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    |||||||||| | |||||||||| |||| |||| |||||||||||||| ||||    
T  4445646 cttatgtataggctatttctataacaaaaaatacaataaagttaaattttttt 4445698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 4549803 - 4549851
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaatt 147  Q
    ||||||||| ||| |||||||||| ||||  ||||||||||||||||||    
T  4549803 gcttatgtacaagctatttctataacaaaagataaaataaagttaaatt 4549851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 4768966 - 4768914
Alignment:
Q  90 agcaaaagggcttatgtataagatatttctatagcaaataataaaataaagtt 142  Q
    |||||||| ||||||||||||| |||| ||||| ||||  |||||||||||||    
T  4768966 agcaaaagtgcttatgtataagctattgctataccaaaagataaaataaagtt 4768914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 10809315 - 10809363
Alignment:
Q  132 aaaataaagttaaattattttggtttaagctataagctgttttcatcag 180  Q
    |||||||||||||| |||||| || ||||||||||| |||| |||||||    
T  10809315 aaaataaagttaaagtatttttgtgtaagctataagttgttctcatcag 10809363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 237
Target Start/End: Complemental strand, 37617462 - 37617390
Alignment:
Q  165 aagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaatttgtcaatc 237  Q
    ||||||||||||| | ||||| |||||||||||||| ||||||  ||| || |||| |||||||  |||||||    
T  37617462 aagctgttttcataaattctcgcaaacagtctcacaaaacttacggcaatagataaactcaaataagtcaatc 37617390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 169
Target Start/End: Complemental strand, 43722470 - 43722378
Alignment:
Q  77 atttgcagcttacagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagct 169  Q
    ||||| |||||| |||| ||| ||||||||||||| ||||| |||| || |  ||||||||||||| ||||  ||  || |||||||||||||    
T  43722470 atttgtagcttatagcacaagcgcttatgtataagctatttatataacagaagataaaataaagttcaattggttccgtataagctataagct 43722378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 48064261 - 48064329
Alignment:
Q  114 atttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcatcagtt 182  Q
    ||||||||||||||  |||||||||||| ||| |||||| || |||| |||||| || |||||| ||||    
T  48064261 atttctatagcaaaagataaaataaagtaaaactatttttgtataagttataagttgatttcataagtt 48064329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 48830207 - 48830131
Alignment:
Q  101 ttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||| |||||||||  | ||  |||||||||||| ||| ||||||  | |||||||||| ||||||||||    
T  48830207 ttatgtataagttatttctattaccaaagataaaataaagtcaaactattttcatataagctataaactgttttcat 48830131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 50725027 - 50725075
Alignment:
Q  61 tttgaataaacagcttatttgcagcttacagcaaaagggcttatgtata 109  Q
    ||||||||||||||||| |||||| ||||| || ||| |||||||||||    
T  50725027 tttgaataaacagcttaattgcagtttacaacacaagcgcttatgtata 50725075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 39907710 - 39907818
Alignment:
Q  69 aacagcttatttgcagcttacagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagc 168  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||   |||||| | |||||||| |||||||| |||| || |||||||||| |    
T  39907710 aacaacttatttgcagcttatagcataagcacttatgtataagatatttcctcagcaaaaagtaaaataaggttaaattgtttttgtataagctataaac 39907809  T
Q  169 tgttttcat 177  Q
    |||||||||    
T  39907810 tgttttcat 39907818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 34083644 - 34083573
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcatcagttct 184  Q
    |||||||||||||||  |||||||||||||||||| |||  || ||||||||||||||||||||| ||||||    
T  34083644 tatttctatagcaaaagataaaataaagttaaattgtttgtgtataagctataagctgttttcataagttct 34083573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 12110263 - 12110375
Alignment:
Q  66 ataaacagctta-tttgcagcttacagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctat 164  Q
    |||||||||||| |||||| |||| |||| |||  |||||| ||||  |||||||||  || |  |||||||||||| ||||| ||||||| ||||||||    
T  12110263 ataaacagcttaatttgcaacttatagcataagcacttatgaataacctatttctattacacaagataaaataaagtcaaattgttttggtataagctat 12110362  T
Q  165 aagctgttttcat 177  Q
    |||||||||||||    
T  12110363 aagctgttttcat 12110375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 40689105 - 40689041
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||||||||  |||||||||||||||||||||||  | ||||||||||||||| |||||    
T  40689105 tatttctatagcaaaagataaaataaagttaaattattttcatataagctataagctgtgttcat 40689041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 49060479 - 49060555
Alignment:
Q  101 ttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||| |||||||||| |||| ||||||||||||| ||||||||||  | ||||||||||| | |||||||    
T  49060479 ttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctataagttattttcat 49060555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 8960764 - 8960707
Alignment:
Q  95 aagggcttatgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    ||||||||||||||| | |||| ||||||||||| |||||||||||||||||| ||||    
T  8960764 aagggcttatgtatatgctattcctatagcaaatgataaaataaagttaaattgtttt 8960707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 20526928 - 20526891
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcaca 200  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20526928 ataagctgttttcatcagttctctcaaacagtctcaca 20526891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 30180002 - 30180063
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgtttt 174  Q
    |||||| ||||||||  |||||||||||||||||| |||| || ||||||||||||||||||    
T  30180002 tatttcgatagcaaaagataaaataaagttaaattgttttcgtataagctataagctgtttt 30180063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 27863722 - 27863659
Alignment:
Q  165 aagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||  ||||  ||||||||||||    
T  27863722 aagctgttttcataagttctctcaaatagtctcacaaaacttatgccagtggataagctcaaat 27863659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 36874097 - 36874022
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttc 175  Q
    |||||||||||| ||||||||||  |||| |||||||||| || |||||||||  | ||||||||||| |||||||    
T  36874097 cttatgtataagctatttctataagaaatgataaaataaatttgaattattttcttataagctataagttgttttc 36874022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 1432099 - 1432019
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaa---gttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||||| |||||||||| ||||  ||||||||||   |||||||||||||  | |||||||| ||||||||||||    
T  1432099 cttatgtataagttatttctataacaaaagataaaataaaaaagttaaattattttcatataagctatcagctgttttcat 1432019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 5628703 - 5628621
Alignment:
Q  95 aagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||| ||||| ||||| |||| ||||| |||||||| |||| || | ||||  |||||| ||||||||||||||||    
T  5628703 aagggcttatgcataagctatttttataacaaatgataaaatagagttgaactgttttcatttaagatataagctgttttcat 5628621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 22296397 - 22296283
Alignment:
Q  66 ataaacagcttatttgcagcttacagca----aaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagc 161  Q
    ||||||| ||||||||||||||| ||||     ||||||||||||||  | |||||||||||| ||  |||||||||||||||||||||||  | ||| |    
T  22296397 ataaacaacttatttgcagcttatagcacaagcaagggcttatgtatttgttatttctatagcgaa-gataaaataaagttaaattattttcctataacc 22296299  T
Q  162 tataagctgttttcat 177  Q
    |||||  |||||||||    
T  22296298 tataaattgttttcat 22296283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 27548200 - 27548278
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||| |||||| ||||||  |||||||  ||||||||||||  |||| ||||  |||||||||||||||||||||||    
T  27548200 gcttatctataagctatttccttagcaaaagataaaataaagtctaattgttttcatttaagctataagctgttttcat 27548278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 33673015 - 33673088
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttt 173  Q
    ||||||||||||| || ||||||||||||  ||||||| || ||||||||| || || |||||||||||||||||    
T  33673015 gcttatgtataagctacttctatagcaaaggataaaat-aacttaaattatatttgtataagctataagctgttt 33673088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 37832272 - 37832195
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||| |||||||  |||||||||||||||  |||||||||||||| ||| |||| | |||||||||||||| |||||||    
T  37832272 gcttgtgtataaactatttctatagcaaaatataaaataaagttagattgttttcg-ttaagctataagcttttttcat 37832195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 39907888 - 39907937
Alignment:
Q  179 agttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    |||||||||||||||||||||| |||||||  | ||||||||||||||||    
T  39907888 agttctctcaaacagtctcacaaaacttatccctgtatataagctcaaat 39907937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 22283862 - 22283799
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||||||| | ||||||||||||||||| |||| || | |||||||| ||||||||||    
T  22283862 tatttctatagcaaaga-taaaataaagttaaattgtttttgtatcagctataaactgttttcat 22283799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 27121718 - 27121666
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    |||||||||||||||||||||||  |||| |||||||||||| ||||| ||||    
T  27121718 cttatgtataagatatttctataataaatgataaaataaagtcaaattgtttt 27121666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 47177578 - 47177650
Alignment:
Q  104 tgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttca 176  Q
    |||||||| |||||||||| ||||  | |||| ||||||||||| ||||  | ||||||||||||||||||||    
T  47177578 tgtataaggtatttctatatcaaaatacaaaacaaagttaaattgttttcatataagctataagctgttttca 47177650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 7453537 - 7453454
Alignment:
Q  93 aaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaa-ttattttggtttaagctataagctgttttc 175  Q
    ||||||| | ||||||||||| |||||||||||||  |||||||||||| ||| || ||||  | ||||||||||| |||||||    
T  7453537 aaaagggttcatgtataagatttttctatagcaaaagataaaataaagtcaaatttgttttcatataagctataagatgttttc 7453454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 13960883 - 13960953
Alignment:
Q  129 aataaaataaagttaaattattttggtttaagctataagctgttttcatcagttctctcaaacagtctcaca 200  Q
    ||||||||||||||||||| |||| || ||| ||||||| ||||||  | ||||||||||||| ||||||||    
T  13960883 aataaaataaagttaaattgtttttgtataacctataagttgtttt-ttaagttctctcaaacggtctcaca 13960953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 177
Target Start/End: Original strand, 20526403 - 20526461
Alignment:
Q  119 tatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||  |||||||||||||||||||| || ||  | ||||||||||||||||||    
T  20526403 tatagcaaaagataaaataaagttaaattatgtttgtacatgctataagctgttttcat 20526461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 21568495 - 21568457
Alignment:
Q  162 tataagctgttttcatcagttctctcaaacagtctcaca 200  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  21568495 tataagctgttttcataagttctcccaaacagtctcaca 21568457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 6824858 - 6824931
Alignment:
Q  102 tatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttc 175  Q
    |||||||||| |||||||||| ||||  ||| || ||||||||||| |||| ||  ||| ||||||||||||||    
T  6824858 tatgtataagctatttctataacaaaagatagaacaaagttaaattgttttagtacaagttataagctgttttc 6824931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 19302562 - 19302497
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||||||||||| | ||||| |||| | ||||||| |||||||  ||||| ||||||||||||    
T  19302562 ataagctgttttcataaattctcccaaatattctcacaaaacttatgtcagtagataagctcaaat 19302497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 20526517 - 20526554
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcaca 200  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  20526517 ataaactgttttcataagttctctcaaacagtctcaca 20526554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 33128629 - 33128662
Alignment:
Q  60 gtttgaataaacagcttatttgcagcttacagca 93  Q
    ||||| ||||||||||||||||||||||||||||    
T  33128629 gtttggataaacagcttatttgcagcttacagca 33128662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 33601409 - 33601344
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||||||||||| |||||||  ||| ||||||||| |||||||  || || ||||||||||||    
T  33601409 ataagctgttttcataagttctcgaaaagagtctcacaaaacttatgccaatagataagctcaaat 33601344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 3610873 - 3610797
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttc 175  Q
    ||||||||||||| |||||||| | ||||  ||||||| |||  ||| | ||||||| ||||||||||| |||||||    
T  3610873 gcttatgtataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagttgttttc 3610797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 3968324 - 3968280
Alignment:
Q  103 atgtataagatatttctatagcaaataataaaataaagttaaatt 147  Q
    ||||||||| |||||||||||||||  |||||||||| |||||||    
T  3968324 atgtataagttatttctatagcaaaagataaaataaatttaaatt 3968280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 25599927 - 25599879
Alignment:
Q  104 tgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    |||||||| ||||| ||||||| || ||||||||| |||||||||||||    
T  25599927 tgtataagttatttttatagcacatgataaaataacgttaaattatttt 25599879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 30496643 - 30496719
Alignment:
Q  101 ttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||  |||||||||| ||||  |||||||||||| ||||| |||| || ||| ||||| | |||||||||    
T  30496643 ttatgtataaactatttctataacaaaatataaaataaagtcaaattgttttcgtataacctataggttgttttcat 30496719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 42656453 - 42656517
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctat 164  Q
    ||||| |||||| |||||||||| ||||  |||||||||||| |||| ||||| || ||||||||    
T  42656453 cttatatataagctatttctataacaaaagataaaataaagtcaaatcatttttgtataagctat 42656517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 43153030 - 43152982
Alignment:
Q  104 tgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    |||||||| |||||||||| ||||  |||||||||||||||||| ||||    
T  43153030 tgtataagctatttctataacaaaagataaaataaagttaaattgtttt 43152982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 174
Target Start/End: Original strand, 6654548 - 6654627
Alignment:
Q  95 aagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgtttt 174  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||| ||||| |||| |||||| || |||||||||||    
T  6654548 aagggcttatgtataagttatttctataacaaataataaaattaagtcaaattgtttttgtttaaactttaagctgtttt 6654627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 9093689 - 9093611
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||| ||||| |||||||||| ||||  |||||||||||||||||| |||| || |||||||||||||||||||||    
T  9093689 gcttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcat 9093611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 4006637 - 4006729
Alignment:
Q  85 cttacagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||| |||| ||| ||||||| |||||||||||||||| ||||| |||||||||||| ||||| ||||  | ||||||||||| |||||||||    
T  4006637 cttatagcataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcat 4006729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 29274362 - 29274284
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||||| |||||||||||||||  |||||||||||| ||||| ||||  | |||||||||| ||||||||||    
T  29274362 gcttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttcat 29274284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 2735013 - 2735084
Alignment:
Q  106 tataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||| ||| |||||| ||||  ||||||||||||||||||||||| || ||| |||||||||||||||||    
T  2735013 tataagctatgtctataacaaaagataaaataaagttaaattatttttgtataatctataagctgttttcat 2735084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 10452493 - 10452392
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcatcagttctctcaaacagtctca 198  Q
    ||||||||||||| |||||||||| ||||  |||||||||| | ||| ||||||  | ||||||||||| ||||| ||| |  ||||||||||||| |||    
T  10452493 gcttatgtataagctatttctataacaaaatataaaataaaatcaaactattttcatataagctataagttgtttccataaactctctcaaacagtatca 10452394  T
Q  199 ca 200  Q
    ||    
T  10452393 ca 10452392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 174
Target Start/End: Original strand, 24476540 - 24476614
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgtttt 174  Q
    |||||||||||| |||||||||||||||  |||||||  ||||||||||||||  | ||||| |||||| |||||    
T  24476540 cttatgtataagctatttctatagcaaaagataaaatgtagttaaattattttcatataagcgataagcagtttt 24476614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 7485167 - 7485102
Alignment:
Q  133 aaataaagttaaattattttggtttaagctataagctgttttcatcagttctctcaaacagtctca 198  Q
    ||||||||||||||| ||||  | ||||||||||| ||||||||| || |||||||||||| ||||    
T  7485167 aaataaagttaaatttttttcatataagctataagttgttttcataagctctctcaaacagcctca 7485102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 9559674 - 9559621
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    ||||||||||||| |||||||||||||||  |||||||||| ||||||| ||||    
T  9559674 gcttatgtataagttatttctatagcaaaagataaaataaatttaaattgtttt 9559621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 9604821 - 9604869
Alignment:
Q  134 aataaagttaaattattttggtttaagctataagctgttttcatcagtt 182  Q
    |||||||| |||||||||| || ||||||||||||||||||||| ||||    
T  9604821 aataaagtaaaattatttttgtataagctataagctgttttcataagtt 9604869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 658576 - 658518
Alignment:
Q  108 taagatatttctatagcaaataat--aaaataaagttaaattattttggtttaagctat 164  Q
    |||| ||||||||||||||| ||   ||||||||||||||||||||| |||||||||||    
T  658576 taagttatttctatagcaaaaaaataaaaataaagttaaattatttttgtttaagctat 658518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 11340758 - 11340680
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||| ||||||||| ||||||| ||||  ||||||||||||||| |||||||  | || |||||||| || ||||||    
T  11340758 gcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataagttggtttcat 11340680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 24836330 - 24836264
Alignment:
Q  101 ttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataag 167  Q
    ||||||||||| |||||||||| ||||  |||||||||||| ||||| |||| || ||| |||||||    
T  24836330 ttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataaactataag 24836264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 264308 - 264373
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctat 164  Q
    |||||| |||||| |||||||| ||||||  |||||||||||||||||  |||| || ||||||||    
T  264308 gcttatatataagctatttctaaagcaaaagataaaataaagttaaatcgttttcgtctaagctat 264373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 507157 - 507222
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctat 164  Q
    ||||||||||||  |||||||||| ||||  |||||||||||||| ||| |||| || ||||||||    
T  507157 gcttatgtataaattatttctataacaaaagataaaataaagttagattgtttttgtataagctat 507222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 1402942 - 1403011
Alignment:
Q  108 taagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||| |||||||||| ||||  |||||||||||||||| ||||||  | ||||||||||  |||||||||    
T  1402942 taagctatttctataacaaaagataaaataaagttaaactattttcatataagctataaattgttttcat 1403011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 3785811 - 3785758
Alignment:
Q  121 tagcaaataataaaataaagttaaattattttggtttaagctataagctgtttt 174  Q
    |||||||  |||||||||||||||| | |||| || ||||||||||||||||||    
T  3785811 tagcaaaagataaaataaagttaaactgttttcgtataagctataagctgtttt 3785758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 29296395 - 29296350
Alignment:
Q  130 ataaaataaagttaaattattttggtttaagctataagctgttttc 175  Q
    ||||||||||||||||||||||| || |||| |||||| |||||||    
T  29296395 ataaaataaagttaaattatttttgtataaggtataagttgttttc 29296350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 32206152 - 32206083
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagct 169  Q
    ||||||| |||| ||| |||||  ||||  || |||||||||||||||||||| || |||||||||||||    
T  32206152 cttatgtgtaagctatctctatgacaaaagatgaaataaagttaaattattttagtataagctataagct 32206083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 430508 - 430456
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    |||||||||||| ||||||||||  |||  || ||||||||||||||||||||    
T  430508 cttatgtataagctatttctatataaaaagatgaaataaagttaaattatttt 430456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 769090 - 769154
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||| ||||   |||||||||||||| || |||| || |||||||||| ||||||||||    
T  769090 tatttctataacaaaagctaaaataaagttaatttttttttgtataagctataaactgttttcat 769154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 10645455 - 10645411
Alignment:
Q  103 atgtataagatatttctatagcaaataataaaataaagttaaatt 147  Q
    ||||||||| |||||||||||||||  ||||||| ||||||||||    
T  10645455 atgtataagctatttctatagcaaacgataaaatgaagttaaatt 10645411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 20671996 - 20671920
Alignment:
Q  101 ttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||| |||||||| | ||||  |||||||||||| ||||| |||| || |||||| |||  |||||||||    
T  20671996 ttatgtataagctatttctagatcaaaagataaaataaagtcaaattgttttcgtataagctttaaattgttttcat 20671920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 42747949 - 42747834
Alignment:
Q  60 gtttgaataaacagcttatttgcagcttacagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaa 159  Q
    ||||| |||||||||||||||||| |||| |||| ||  || |||||||||| ||||||||||| | |  |||||  |||||||||||||||  || |||    
T  42747949 gtttggataaacagcttatttgcaacttatagcacaaacgcctatgtataagctatttctatagaataagataaatgaaagttaaattatttatgtgtaa 42747850  T
Q  160 gctataagctgttttc 175  Q
    ||||||||||||||||    
T  42747849 gctataagctgttttc 42747834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 1395593 - 1395686
Alignment:
Q  84 gcttacagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||| |||||||| || |||||||||| |||||||||| ||||  |||||||||||| ||||||||||  | |||||||| | ||||||||||    
T  1395593 gcttatagcaaaagtgcatatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctatgaactgttttcat 1395686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 30956751 - 30956682
Alignment:
Q  107 ataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttca 176  Q
    ||||| |||||||||||||||  |||||||||||||||||| |||| || || |||||||| ||||||||    
T  30956751 ataagctatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttca 30956682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 30972563 - 30972494
Alignment:
Q  107 ataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttca 176  Q
    ||||| |||||||||||||||  |||||||||||||||||| |||| || || |||||||| ||||||||    
T  30972563 ataagctatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttca 30972494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 44061151 - 44061078
Alignment:
Q  104 tgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||| |||||||||||||||  ||||||||| |||||||| ||||  | ||||||||||| |||||||||    
T  44061151 tgtataagctatttctatagcaaaagataaaataaggttaaattgtttttctataagctataagttgttttcat 44061078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 2128403 - 2128331
Alignment:
Q  80 tgcagcttacagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    ||||||||| |||| ||| | ||||||||||| |||||||||| ||||  |||||||||||||||||| ||||    
T  2128403 tgcagcttatagcataagcgtttatgtataagctatttctataacaaaagataaaataaagttaaattgtttt 2128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 39980800 - 39980864
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaa 227  Q
    ||||||||||||||| |||||||| ||||||||||||| |||||||   |||| |||||||||||    
T  39980800 ataagctgttttcataagttctcttaaacagtctcacaaaacttatgctagtagataagctcaaa 39980864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 31365187 - 31365122
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    |||||||| |||||| ||||||| |||||||||||||| |||||||  || || ||||||||||||    
T  31365187 ataagctgctttcataagttctcccaaacagtctcacaaaacttatgccaatagataagctcaaat 31365122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 48397587 - 48397684
Alignment:
Q  103 atgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcatcagttctctcaaacagtctcaca 200  Q
    ||||||||| ||||| ||||  |||  |||||||||||| ||||| ||||  ||||||||||||| ||||||||| || |||  |||||| |||||||    
T  48397587 atgtataagttatttttataataaaagataaaataaagtcaaattgtttttatttaagctataagttgttttcattagctcttccaaacaatctcaca 48397684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 583991 - 584051
Alignment:
Q  107 ataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataag 167  Q
    ||||| ||||||||||| |||| |||||||||||||||||| |||| ||| | ||||||||    
T  583991 ataagttatttctatagaaaatgataaaataaagttaaattgtttttgttcatgctataag 584051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 2719420 - 2719483
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||| ||||||  |||||||||||| ||||| |||| ||||||||||||| ||||||||||    
T  2719420 tatttctaaagcaaaatataaaataaagtgaaattgtttt-gtttaagctataaactgttttcat 2719483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 18405825 - 18405765
Alignment:
Q  168 ctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    |||||||||| ||||||  |||||||||||||| |||||||  ||||| ||||||||||||    
T  18405825 ctgttttcataagttcttgcaaacagtctcacaaaacttatgtcagtagataagctcaaat 18405765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 25447363 - 25447299
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||| |||  |||||||||| ||||||| |||| || |||||||||| ||||||||||    
T  25447363 tatttctatagtaaaagataaaataaacttaaattgtttttgtataagctataaactgttttcat 25447299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 30956824 - 30956780
Alignment:
Q  60 gtttgaataaacagcttatttgcagcttacagcaaaagggcttat 104  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||    
T  30956824 gtttggataaacagcttatttgcagcttatagcacaagggcttat 30956780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 30972636 - 30972592
Alignment:
Q  60 gtttgaataaacagcttatttgcagcttacagcaaaagggcttat 104  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||    
T  30972636 gtttggataaacagcttatttgcagcttatagcacaagggcttat 30972592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 33405286 - 33405222
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||||||||   |||||||||||||| || ||||  | |||||||||||||||||||||    
T  33405286 tatttctatagcaaaaggtaaaataaagttaatttgttttcatataagctataagctgttttcat 33405222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 402678 - 402600
Alignment:
Q  95 aagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgtttt 174  Q
    ||||||||||||||||| ||||||||||| |||  || || |||| ||||||| |||| || |||| |||||||||||||    
T  402678 aagggcttatgtataagctatttctatagaaaaagat-aattaaatttaaattgttttcgtataagttataagctgtttt 402600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 46886823 - 46886747
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||| |||| || ||||||||| ||||  ||||||||  ||||||||||||| || | |||||||||||||||||||    
T  46886823 gcttatctatatgaaatttctatatcaaaagataaaata--gttaaattatttttgtatgagctataagctgttttcat 46886747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 52618946 - 52619017
Alignment:
Q  105 gtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttca 176  Q
    ||||||| |||||||| | ||||| || ||||||||||||||| ||||  | |||| |||||||||||||||    
T  52618946 gtataagctatttctaaaacaaatgattaaataaagttaaattgttttcatataagttataagctgttttca 52619017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 35959581 - 35959515
Alignment:
Q  107 ataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttt 173  Q
    ||||| ||||||||||| |||  ||||||||||||||||||||||| || || ||| |||| |||||    
T  35959581 ataagctatttctatagaaaaggataaaataaagttaaattatttttgtatatgctgtaagttgttt 35959515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 182
Target Start/End: Complemental strand, 51510321 - 51510243
Alignment:
Q  104 tgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcatcagtt 182  Q
    |||||||| ||||||||| |||||  | ||| |||||| ||||||||||| | ||| ||||||| ||||||||| ||||    
T  51510321 tgtataaggtatttctatggcaaaagaaaaagtaaagtaaaattattttgatataaactataagttgttttcataagtt 51510243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 237
Target Start/End: Original strand, 584118 - 584191
Alignment:
Q  164 taagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaatttgtcaatc 237  Q
    |||||||||||||| | |||||  ||||||||||||| |||||||   |||| ||||||||||||  |||||||    
T  584118 taagctgttttcataaattctccaaaacagtctcacagaacttatgctagtagataagctcaaataagtcaatc 584191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 3776390 - 3776353
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcaca 200  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  3776390 ataagctgttttcataagttctctcaaacattctcaca 3776353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 21367738 - 21367783
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttat 208  Q
    ||||||||||||||| ||||||| ||||||||| |||| |||||||    
T  21367738 ataagctgttttcataagttctcccaaacagtcccacaaaacttat 21367783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 23952230 - 23952161
Alignment:
Q  108 taagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||| |||||||||| ||||  ||||||| |||| ||| |||||| || |||||| ||||||||||||||    
T  23952230 taagttatttctataacaaaagataaaattaagtcaaagtatttttgtataagctgtaagctgttttcat 23952161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 24085337 - 24085272
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||||||||||| |||||||  || |||||||||| |||||||  | ||| ||||||||||||    
T  24085337 ataagctgttttcataagttctccaaaccagtctcacaaaacttatgccggtagataagctcaaat 24085272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 26878271 - 26878332
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctc 224  Q
    ||||||| ||||||  |||||||||||||||| |||| ||||||||  ||||| ||||||||    
T  26878271 ataagctattttcacaagttctctcaaacagtttcacgcaacttatgtcagtagataagctc 26878332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 37689300 - 37689365
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||||||||| | ||||||| || ||||| ||||| ||| |||| ||||| ||||||||||||    
T  37689300 ataagctgttttcttaagttctcccatacagtatcacagaacctatttcagtaaataagctcaaat 37689365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 43079679 - 43079756
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttca 176  Q
    |||||||| |||| |||||||||| |||| |||||||  |||||||||  ||||  | |||| |||||||||||||||    
T  43079679 gcttatgtgtaagctatttctataacaaaaaataaaaggaagttaaatcgttttcatataagttataagctgttttca 43079756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 44014218 - 44014295
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||||| |||||||||| | ||  |||||| |||||| |||| |||| || |||| ||||||||| ||||||    
T  44014218 cttatgtataagctatttctataactaaagataaaacaaagtttaatttttttcgtgtaagatataagctgctttcat 44014295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 44014798 - 44014761
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcaca 200  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  44014798 ataagctgttttcataagttttctcaaacagtctcaca 44014761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 21367611 - 21367682
Alignment:
Q  101 ttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||||||| ||||||||||     |||||||||||||||| |||| || |||  |||||| |||||||||    
T  21367611 ttatgtataagatatctctatagcaa-----aaaataaagttaaattgttttcgtataatgtataagttgttttcat 21367682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 32555083 - 32555031
Alignment:
Q  130 ataaaataaagttaaattattttggtttaagctataagctgttttcatcagtt 182  Q
    |||||||||||| ||||||||||  | ||||||||||| ||||||||| ||||    
T  32555083 ataaaataaagtcaaattattttcctataagctataagttgttttcatgagtt 32555031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 34759659 - 34759619
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaag 140  Q
    |||||||||||| |||||||||| |||| ||||||||||||    
T  34759659 cttatgtataagctatttctatatcaaaaaataaaataaag 34759619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 37788800 - 37788875
Alignment:
Q  101 ttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||| ||||| |||| ||||  ||||||||||||  ||||||||| || ||| ||||||| |||||||||    
T  37788800 ttatgtataagttattt-tataacaaaagataaaataaagtccaattattttcgtataatctataagttgttttcat 37788875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 48365010 - 48364934
Alignment:
Q  101 ttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||| |||||| ||| ||||  |||||||||||| ||||| ||||  |||| || ||||| |||||||||    
T  48365010 ttatgtataagttatttcgataacaaaagataaaataaagtcaaattgttttcatttacgccataagttgttttcat 48364934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 10114427 - 10114504
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||||| |||||||||||||||  ||||||| ||||| |||| ||||||| |||||||||||||||||||||    
T  10114427 gcttatgtataagctatttctatagcaaaagataaaat-aagttgaattgttttggtataagctataagctgttttcat 10114504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 1929955 - 1930032
Alignment:
Q  66 ataaacagcttatttgcagcttacagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagtta 143  Q
    ||||||| |||| |||||||||| |||| ||| ||||||||||||| ||||||||||| |||  ||||||||||||||    
T  1929955 ataaacaacttacttgcagcttatagcacaagcgcttatgtataagttatttctatagaaaaagataaaataaagtta 1930032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 7514476 - 7514593
Alignment:
Q  61 tttgaataaacagcttatttgcagcttacagca-aaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaa 159  Q
    |||||||||| | |||| |||||| ||| |||| ||||  |||||||||||| ||||||||||||||| | |||||||| ||| |||| ||||  | |||    
T  7514476 tttgaataaataacttagttgcagattatagcacaaagcccttatgtataagctatttctatagcaaaaactaaaataatgttcaattgttttcatataa 7514575  T
Q  160 gctataagctgttttcat 177  Q
    |||| |||||||||||||    
T  7514576 gctacaagctgttttcat 7514593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 37153045 - 37152963
Alignment:
Q  77 atttgcagcttacagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaa 159  Q
    ||||||| |||| || | ||| |||||||||||| ||||||||||| ||||  |||||||||||||||||| |||| ||||||    
T  37153045 atttgcaacttataggataagcgcttatgtataatatatttctataacaaagtataaaataaagttaaattgtttttgtttaa 37152963  T

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Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 16211015 - 16210942
Alignment:
Q  103 atgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttca 176  Q
    ||||||||| ||||||||||| |||| |||||||||||||| ||| ||||  | ||||||||||| ||||||||    
T  16211015 atgtataagctatttctatagtaaatgataaaataaagttacattgttttcatataagctataagttgttttca 16210942  T

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Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 35534612 - 35534547
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||   |||| ||||||||||||    
T  35534612 ataagctgttttcacaagttctctcaaacagtctcacaaaacttatgttagtagataagctcaaat 35534547  T

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Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 4558737 - 4558809
Alignment:
Q  101 ttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttt 173  Q
    ||||||||||| ||||||||||  |||  |||||||||||||||||||||||  | || ||||||||||||||    
T  4558737 ttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgttt 4558809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 177
Target Start/End: Complemental strand, 7918903 - 7918828
Alignment:
Q  102 tatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||  |||||||||| | || ||||||||||||||||||| ||||  | ||||||||||| |||||||||    
T  7918903 tatgtataacctatttctatatcgaaaaataaaataaagttaaatttttttcttgtaagctataagttgttttcat 7918828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 36338042 - 36337963
Alignment:
Q  90 agcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagct 169  Q
    |||| ||| ||||| ||||||||||||| |||| ||||| || ||||||||||||| |||||  || |||||||||||||    
T  36338042 agcataagtgcttaagtataagatatttttataacaaattatcaaataaagttaaactatttacgtataagctataagct 36337963  T

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Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 1470985 - 1470911
Alignment:
Q  103 atgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||| ||||||||||  |||  |||||||||||| |||||| |||  | |||||||||||||||||||||    
T  1470985 atgtataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataagctgttttcat 1470911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 6526285 - 6526215
Alignment:
Q  130 ataaaataaagttaaattattttggtttaagctataagctgttttcatcagttctctcaaacagtctcaca 200  Q
    |||||||||||| ||||| ||| ||| ||| ||||||| ||||||| | |||||||||||||| |||||||    
T  6526285 ataaaataaagtgaaattgtttaggtataatctataagttgttttcctaagttctctcaaacaatctcaca 6526215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 10758375 - 10758321
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttggtttaagctataag 167  Q
    |||||||||||||||| |||||||||||||||||| |||| || || ||||||||    
T  10758375 tatttctatagcaaatcataaaataaagttaaattgtttttgtatatgctataag 10758321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 26771336 - 26771398
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctca 225  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||||  | ||| |||||||||    
T  26771336 ataagctgttttcataagttctcccaaacagtctcacaaaacttatgcccgtagataagctca 26771398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 28763438 - 28763484
Alignment:
Q  162 tataagctgttttcatcagttctctcaaacagtctcacacaacttat 208  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||||    
T  28763438 tataagctgttttcataagttctcccaaacagtctcacaaaacttat 28763484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 28769472 - 28769394
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||||| |||| ||||| ||||  ||||||| |||| ||| ||||||  | |||||||||||||||||||||    
T  28769472 gcttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataagctgttttcat 28769394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 26215433 - 26215486
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    ||||||||||||| |||||||||| ||||  |||||||||||||||| ||||||    
T  26215433 gcttatgtataagctatttctataacaaaagataaaataaagttaaactatttt 26215486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 30251453 - 30251388
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||||||||| | ||||||| |||||||||||||  |||||||  ||||| ||||||||||||    
T  30251453 ataagctgttttcgtaagttctcccaaacagtctcacgaaacttatgtcagtagataagctcaaat 30251388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 42597339 - 42597416
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||||| |||||||||| ||||  |||||||||||| ||||| ||||  |  |||||||||| |||||||||    
T  42597339 cttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcat 42597416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 26820142 - 26820214
Alignment:
Q  105 gtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||| |||||||||| ||||  |||||||||||| ||| ||||||| | ||| |||||||| ||||||||    
T  26820142 gtataagttatttctataacaaaagataaaataaagtcaaactattttgttataaactataagccgttttcat 26820214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 29819078 - 29819034
Alignment:
Q  60 gtttgaataaacagcttatttgcagcttacagcaaaagggcttat 104  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||    
T  29819078 gtttggataaacaacttatttgcagcttatagcaaaagggcttat 29819034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 773297 - 773344
Alignment:
Q  130 ataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  773297 ataaaataaagttaaattgttttcattttagctataagctgttttcat 773344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 778357 - 778404
Alignment:
Q  130 ataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  778357 ataaaataaagttaaattgttttcattttagctataagctgttttcat 778404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 787791 - 787838
Alignment:
Q  130 ataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  787791 ataaaataaagttaaattgttttcattttagctataagctgttttcat 787838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 1058272 - 1058229
Alignment:
Q  60 gtttgaataaacagcttatttgcagcttacagcaaaagggctta 103  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||    
T  1058272 gtttgaataaacagcttatttgcagcttatagcacaagcgctta 1058229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 3936787 - 3936862
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttc 175  Q
    |||||||||||  |||||||||| ||||  ||||||||||| |||||| | ||  | |||||||||||||||||||    
T  3936787 cttatgtataatctatttctataacaaaggataaaataaagctaaattgtcttcctataagctataagctgttttc 3936862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 141
Target Start/End: Original strand, 2698726 - 2698772
Alignment:
Q  95 aagggcttatgtataagatatttctatagcaaataataaaataaagt 141  Q
    ||||||||||| ||||| ||||||||||||||| | |||||||||||    
T  2698726 aagggcttatgcataagctatttctatagcaaaaagtaaaataaagt 2698772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 35749572 - 35749506
Alignment:
Q  160 gctataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaa 226  Q
    |||| ||||||||||||| ||||||||||||||| ||| || |||||||  || || ||||||||||    
T  35749572 gctacaagctgttttcataagttctctcaaacagcctcgcaaaacttatgtcaatagataagctcaa 35749506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 1058076 - 1058011
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    |||||| |||||||  ||||||| |||||||||||||| |||||||   |||| ||||||||||||    
T  1058076 ataagcagttttcaaaagttctcccaaacagtctcacaaaacttatgtaagtagataagctcaaat 1058011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 1058199 - 1058130
Alignment:
Q  107 ataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttca 176  Q
    ||||| ||||| |||||||||| |||||||||||||||  | |||| || || |||||||||| ||||||    
T  1058199 ataagctatttttatagcaaatcataaaataaagttaatctgtttttgtatatgctataagctattttca 1058130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 1112790 - 1112867
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttca 176  Q
    ||||||||||| | |||||||||| ||||  ||||||||| |||||||| ||||    |||||||||||| |||||||    
T  1112790 gcttatgtatatgctatttctataacaaaagataaaataaggttaaattgttttcacataagctataagcggttttca 1112867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 3537159 - 3537098
Alignment:
Q  104 tgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctata 165  Q
    ||||||||  ||||||||||||||  |||||||||||| ||||| |||| || |||||||||    
T  3537159 tgtataagcaatttctatagcaaaagataaaataaagtcaaattgttttcgtataagctata 3537098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 10758256 - 10758211
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttat 208  Q
    ||||||||||||||| | |||| ||||||||||||||| |||||||    
T  10758256 ataagctgttttcataaattctatcaaacagtctcacaaaacttat 10758211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 12497055 - 12497006
Alignment:
Q  179 agttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    |||||||||||||||||||||| |||||||  ||| | ||||||||||||    
T  12497055 agttctctcaaacagtctcacaaaacttatgccaggagataagctcaaat 12497006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 148
Target Start/End: Original strand, 12976158 - 12976199
Alignment:
Q  107 ataagatatttctatagcaaataataaaataaagttaaatta 148  Q
    ||||| |||||||||||||||  |||||||||||||||||||    
T  12976158 ataagctatttctatagcaaaatataaaataaagttaaatta 12976199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 16162830 - 16162867
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcaca 200  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  16162830 ataagctgttttcataagttttctcaaacagtctcaca 16162867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 16163410 - 16163333
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||||| |||||||||| | ||  |||||| |||||| |||| |||| || |||| ||||||||| ||||||    
T  16163410 cttatgtataagctatttctataactaaagataaaacaaagtttaatttttttcgtgtaagatataagctgctttcat 16163333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 27049306 - 27049382
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||| ||||||  |||||||||||||||  || |||||||||| ||||||||| || |||||||||| || |||||||    
T  27049306 cttacgtataatttatttctatagcaaaagat-aaataaagttcaattattttcgtataagctataaacttttttcat 27049382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 7646145 - 7646221
Alignment:
Q  101 ttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||| ||||||||||  |||   ||||||||||||||||| |||| || ||| |||||| |||| |||||    
T  7646145 ttatgtataagctatttctataagaaaaggtaaaataaagttaaattgtttttgtataatctataaactgtcttcat 7646221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 10120827 - 10120859
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtc 195  Q
    ||||||||||||||| |||||||||||||||||    
T  10120827 ataagctgttttcataagttctctcaaacagtc 10120859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 29169009 - 29168949
Alignment:
Q  115 tttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttc 175  Q
    |||||||||||||  ||||||| || |||||||||||| || || | ||||||||||||||    
T  29169009 tttctatagcaaaagataaaattaaattaaattatttttgtatatgttataagctgttttc 29168949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 35374492 - 35374428
Alignment:
Q  113 tatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||||| ||  |||||||||||||||||| ||||  | |||||||||| ||| ||||||    
T  35374492 tatttctatagcgaaagataaaataaagttaaattgttttcatataagctataatctgatttcat 35374428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 37353381 - 37353306
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttc 175  Q
    ||||||||| ||  |||||||||| ||||  ||||| |||||||||||| |||| || || ||||||||||||||||    
T  37353381 gcttatgtacaaactatttctataacaaaagataaa-taaagttaaattgtttttgtgtatgctataagctgttttc 37353306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 40981002 - 40981046
Alignment:
Q  60 gtttgaataaacagcttatttgcagcttacagcaaaagggcttat 104  Q
    ||||| ||||||||||||||||||||||| |||| ||| ||||||    
T  40981002 gtttggataaacagcttatttgcagcttatagcacaagcgcttat 40981046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 43717928 - 43717868
Alignment:
Q  168 ctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    |||||||||| ||||||| |||| ||||||||| |||||||  || || ||||||||||||    
T  43717928 ctgttttcataagttctcccaaatagtctcacaaaacttatgtcaatagataagctcaaat 43717868  T

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Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 2416250 - 2416325
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgtttt 174  Q
    ||||||||||||| ||||||| |||||||  ||||||| |||||||||| ||||| | ||||||||||||||||||    
T  2416250 gcttatgtataagttatttctgtagcaaaagataaaatgaagttaaattgttttgatataagctataagctgtttt 2416325  T

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Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 193
Target Start/End: Original strand, 39567845 - 39567934
Alignment:
Q  104 tgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcatcagttctctcaaacag 193  Q
    ||||||||||||||||||| ||||  |||||||||||||||||| |||     ||||||||||||||||||||| |||| || |||||||    
T  39567845 tgtataagatatttctataacaaaagataaaataaagttaaattgtttcaagataagctataagctgttttcataagttttcccaaacag 39567934  T

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Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 177
Target Start/End: Original strand, 4026713 - 4026832
Alignment:
Q  60 gtttgaataaacagctta-tttgcagctta-cagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggttt 157  Q
    ||||| |||||||| ||| ||||||||||| ||  | ||| |||||| |||||| ||||| |||||||||  ||||||||||||||||||||||| |  |    
T  4026713 gtttggataaacagtttaatttgcagcttatcatgataagtgcttatctataagctatttttatagcaaaagataaaataaagttaaattatttttgcat 4026812  T
Q  158 aagctataagctgttttcat 177  Q
    ||  ||||||||||||||||    
T  4026813 aaattataagctgttttcat 4026832  T

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Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 18066032 - 18066143
Alignment:
Q  66 ataaacagcttatttgcagcttacagcaaaagggcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctata 165  Q
    ||||||| ||||| || |||||| |||| ||| ||| ||||| ||| |||||||| || |||  || ||||||||||||||| ||||  | |||||||||    
T  18066032 ataaacatcttatctgtagcttatagcataagcgctcatgtagaagctatttctacagtaaaatatgaaataaagttaaattgttttcatataagctata 18066131  T
Q  166 agctgttttcat 177  Q
    ||||||||||||    
T  18066132 agctgttttcat 18066143  T

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Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 43199351 - 43199429
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||| |||||||| |||||||| | ||||  |||||||||||||||||||| || || ||||||||||| |||||||||    
T  43199351 gcttctgtataagttatttctacaacaaaagataaaataaagttaaattatcttcgtataagctataagttgttttcat 43199429  T

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Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 42457887 - 42457963
Alignment:
Q  101 ttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||  ||||||||||| |||  |||||||||||||||||| |||| ||||||||| | |||||| |||||    
T  42457887 ttatgtataatctatttctatagtaaaagataaaataaagttaaattgtttttgtttaagctcttagctgtattcat 42457963  T

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Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 182
Target Start/End: Original strand, 1646951 - 1647034
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcatcagtt 182  Q
    ||||||||| ||| ||||| |||||||||  ||||||| ||||| |||| ||||  | ||||||||||||||||||||| ||||    
T  1646951 gcttatgtacaagctatttgtatagcaaacgataaaattaagttcaattgtttttttataagctataagctgttttcataagtt 1647034  T

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Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 182
Target Start/End: Original strand, 9395071 - 9395150
Alignment:
Q  103 atgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcatcagtt 182  Q
    ||||||||||| ||||||||| |||  ||||||||||| |||||| ||||  | ||| ||||||||||||||||| ||||    
T  9395071 atgtataagatttttctatagaaaaagataaaataaagctaaattgttttcatataatctataagctgttttcattagtt 9395150  T

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Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 25609733 - 25609808
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgtttt 174  Q
    ||||||||||||| ||||||||||  |||  |||||||||||| || ||||||| || ||||||||||| ||||||    
T  25609733 gcttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagctataagttgtttt 25609808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 3102630 - 3102708
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||||| ||||| |||||||||  |||||||||||| ||| ||||||  | ||| |||| ||||||||||||    
T  3102630 gcttatgtataagctatttttatagcaaaatataaaataaagtcaaactatttttatataatctattagctgttttcat 3102708  T

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Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 7043855 - 7043804
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    ||||||||||||| |||||||||||  || ||||||||||||||||||||||||    
T  7043855 gcttatgtataagttatttctatag--aacaataaaataaagttaaattatttt 7043804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 27317450 - 27317524
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaatttgtcaatc 237  Q
    ||||| ||||||||| |||||||||||||||||||| | |||||||  | ||| ||||||||||||  |||||||    
T  27317450 ataagttgttttcataagttctctcaaacagtctcataaaacttatgtcggtagataagctcaaataagtcaatc 27317524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 36534838 - 36534904
Alignment:
Q  162 tataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    |||||||||||||||| |||| || |||||||||||||| |||||||   || ||||||||||||||    
T  36534838 tataagctgttttcataagttatcccaaacagtctcacaaaacttatgaaagcatataagctcaaat 36534904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 42907303 - 42907373
Alignment:
Q  106 tataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttca 176  Q
    |||||| |||||||||| || |  | |||||||||||||||| |||| |||||||||||||| ||||||||    
T  42907303 tataagctatttctataacagaagaaaaaataaagttaaattgttttcgtttaagctataagttgttttca 42907373  T

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Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 3611163 - 3611216
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    ||||||||||||| |||||||||||||||   ||||||||||||||||| ||||    
T  3611163 gcttatgtataagttatttctatagcaaaaggtaaaataaagttaaattgtttt 3611216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 5133709 - 5133786
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttca 176  Q
    ||||||||||||| |||||||||| ||||  ||||||||||| |||| | ||||  | |||| |||||||||||||||    
T  5133709 gcttatgtataagctatttctataacaaaagataaaataaagataaactgtttttatataagatataagctgttttca 5133786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 7928297 - 7928232
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||||||||||  |||||| || ||||||||||||||||||||  || || ||||||||||||    
T  7928297 ataagctgttttcaaaagttctttctaacagtctcacacaacttatgtcaatagataagctcaaat 7928232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 42659210 - 42659145
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    ||||||||||||||  | ||||| |||||||||||||| |||||||  ||||| ||||||||||||    
T  42659210 ataagctgttttcaaaacttctcccaaacagtctcacaaaacttatgccagtaaataagctcaaat 42659145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 182
Target Start/End: Original strand, 39621890 - 39621971
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcatcagtt 182  Q
    ||||||| |||||||||||||||| || | ||||||||||||| |||   |||| || ||| ||||||||||||||||| ||||    
T  39621890 gcttatgaataagatatttctataacacaaaataaaataaagtcaaa--ctttttgtataatctataagctgttttcataagtt 39621971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 3932295 - 3932342
Alignment:
Q  107 ataagatatttctatagcaaataataaaataaagttaaattattttgg 154  Q
    ||||| |||||||||||||||  ||||||||||||||||| |||||||    
T  3932295 ataagttatttctatagcaaaagataaaataaagttaaataattttgg 3932342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 2142590 - 2142668
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||| |||||||| |||| |||||||||    |||||||||| || |||||||| || ||||||||||| |||||||||    
T  2142590 gcttgtgtataagctattactatagcaataggtaaaataaagctagattatttttgtataagctataagttgttttcat 2142668  T

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Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 3673744 - 3673822
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||| || |||||||||| ||||  |||||||||||||||||| ||||  | |||| |||||| | |||||||    
T  3673744 gcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatataagttataagtttttttcat 3673822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 8017372 - 8017449
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||||||| || |||||||||| ||||  |||||| ||||||||||||||||  | |||||| ||| ||||||||||    
T  8017372 gcttatgtatcagctatttctata-caaaggataaaacaaagttaaattattttcatataagctgtaaactgttttcat 8017449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 12464598 - 12464528
Alignment:
Q  107 ataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||| ||||||| ||| |||  |||||||||||||||||| |||| || || |||||||||| |||||||    
T  12464598 ataagctatttctgtagaaaaagataaaataaagttaaattgtttttgtatatgctataagctattttcat 12464528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 15377702 - 15377780
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||| |||||| || ||||||| ||||  |||||||||||||| ||| ||||  | |||| ||||||||||||||||    
T  15377702 gcttatttataagctacttctataccaaaggataaaataaagttagattgttttcatataagttataagctgttttcat 15377780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 17952834 - 17952756
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||| |||||| |||||||||| ||||  |||||||||||| ||| ||||||  | ||||||| ||| |||||||||    
T  17952834 gcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcat 17952756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 20952426 - 20952500
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaatttgtcaatc 237  Q
    |||| |||||||||| |||||||| ||| ||||| ||| ||||| |  ||||||||||||||||||  |||||||    
T  20952426 ataaactgttttcataagttctcttaaatagtctaacaaaacttttgccagtatataagctcaaataagtcaatc 20952500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 30331830 - 30331896
Alignment:
Q  171 ttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaatttgtcaatc 237  Q
    ||||||| ||||||| |||||||||||||| |||||||  ||||| ||||||| ||||  |||||||    
T  30331830 ttttcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctgaaataagtcaatc 30331896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 32837392 - 32837430
Alignment:
Q  162 tataagctgttttcatcagttctctcaaacagtctcaca 200  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  32837392 tataagctgttttcataagttctcccaaacagtctcaca 32837430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 12313275 - 12313242
Alignment:
Q  130 ataaaataaagttaaattattttggtttaagcta 163  Q
    ||||||||||||||||||||||| ||||||||||    
T  12313275 ataaaataaagttaaattatttttgtttaagcta 12313242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 15305602 - 15305647
Alignment:
Q  107 ataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    ||||| ||||| |||||||||| ||||||||| |||||||||||||    
T  15305602 ataagctatttttatagcaaatgataaaataatgttaaattatttt 15305647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 15757657 - 15757592
Alignment:
Q  163 ataagctgttttcatcagttctctcaaacagtctcacacaacttattgcagtatataagctcaaat 228  Q
    |||||| |||||||| | ||||| ||| |||||||||| |||||||  ||||| ||||||||||||    
T  15757657 ataagcagttttcataaattctcccaagcagtctcacaaaacttatgccagtaaataagctcaaat 15757592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 26143769 - 26143724
Alignment:
Q  104 tgtataagatatttctatagcaaataataaaataaagttaaattat 149  Q
    |||||||| |||||||||||||||  ||||||||||||| ||||||    
T  26143769 tgtataagctatttctatagcaaaagataaaataaagttcaattat 26143724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 39341220 - 39341144
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataat--aaaataaagttaaattattttggtttaagctataagctgttt 173  Q
    |||||||||| || |||||||||| ||||  ||  |||||||||||||| | ||||||| |||| ||||||||||||    
T  39341220 gcttatgtatgagttatttctataacaaaatattaaaaataaagttaaactgttttggtataagttataagctgttt 39341144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 1633744 - 1633700
Alignment:
Q  60 gtttgaataaacagcttatttgcagcttacagcaaaagggcttat 104  Q
    ||||| ||||||||||||||||||||||| |||| ||| ||||||    
T  1633744 gtttggataaacagcttatttgcagcttatagcagaagtgcttat 1633700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 10494628 - 10494688
Alignment:
Q  122 agcaaataataaaataaagttaaattattttggtttaagctataagctgttttcatcagtt 182  Q
    ||||||| |||||||||||| ||||| |||| ||||| | |||||| ||||||||| ||||    
T  10494628 agcaaatgataaaataaagtgaaattgtttttgtttatggtataagttgttttcataagtt 10494688  T

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Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 31744370 - 31744414
Alignment:
Q  164 taagctgttttcatcagttctctcaaacagtctcacacaacttat 208  Q
    |||||||||||||  |||||||||||||||||||| | |||||||    
T  31744370 taagctgttttcaaaagttctctcaaacagtctcagaaaacttat 31744414  T

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Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 40682506 - 40682463
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagtta 143  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||||    
T  40682506 gcttatgtataagctatttctatagcaaa-aataacataaagtta 40682463  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 43199900 - 43199852
Alignment:
Q  125 aaataataaaataaagttaaattattttggtttaagctataagctgttt 173  Q
    |||| |||||||||||||||||| |||| || ||||||||||| |||||    
T  43199900 aaatgataaaataaagttaaattgtttttgtataagctataagttgttt 43199852  T

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Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 104267 - 104214
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattatttt 152  Q
    ||||||||||||| |||||||||| |||| |||||||||| |||| ||||||||    
T  104267 gcttatgtataagttatttctataacaaaaaataaaataatgttatattatttt 104214  T

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Target: scaffold0549 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 1857 - 1779
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||| ||||||||| ||||||| ||||  ||||||||||||||| |||||||  | || |||||||| || ||||||    
T  1857 gcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataagttggtttcat 1779  T

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Target: scaffold0549; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 3947 - 3869
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    |||||| ||||||||| ||||||| ||||  ||||||||||||||| |||||||  | || |||||||| || ||||||    
T  3947 gcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataagttggtttcat 3869  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 21410 - 21348
Alignment:
Q  100 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagct 162  Q
    |||||||||||| ||||| ||||| |||  |||||||||||||||||| |||| || ||||||    
T  21410 cttatgtataagctatttttataggaaaagataaaataaagttaaattgttttcgtataagct 21348  T

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Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 27513 - 27591
Alignment:
Q  99 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcat 177  Q
    ||||||||||||| |||||||||| || |  |||||||||||| ||||| ||||  | ||| ||||||| |||||||||    
T  27513 gcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcat 27591  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 178426 - 178381
Alignment:
Q  131 taaaataaagttaaattattttggtttaagctataagctgttttca 176  Q
    |||||||||||||||||||| | || |||||||| |||||||||||    
T  178426 taaaataaagttaaattattgtcgtataagctattagctgttttca 178381  T

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