View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13059_high_9 (Length: 527)
Name: NF13059_high_9
Description: NF13059
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13059_high_9 |
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Alignment Details
Target: chr6 (Bit Score: 451; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 451; E-Value: 0
Query Start/End: Original strand, 9 - 507
Target Start/End: Complemental strand, 32386007 - 32385509
Alignment:
| Q |
9 |
agcacagataaaaattatttagttgaaaccgaagaagttagtgaatcataatggaaagtgttgtttattggatgccagaacattctcatgtgcaannnnn |
108 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32386007 |
agcactgataaaaattatttagttgaaaccgaagaagttagtgaatcataatggaaagtgttgtttattggatgccagaacattctcatgtgcaattttt |
32385908 |
T |
|
| Q |
109 |
nnngcaggagccagtcatcagatcctgatagcttccccaaaccgtctccatcatcaaatatatttaccgatactaaccggaaaggactgcagaaagaagt |
208 |
Q |
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||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32385907 |
tttgcaggagccagtcatcaaatcctgatagcttccccaaaccatctccatcatcaaatatatttaccgatactaaccggaaaggactgcagaaagaagt |
32385808 |
T |
|
| Q |
209 |
agcagcagcttttgaacctttggtgaaagccaaagataatgctgtaaatttcaaagaaaaagttagtcatgataatacgttcaggagccagtcatcaaat |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32385807 |
agcagcagcttttgaacctttggtgaaagccaaagataatgctgtaaatttcaaagaaaaagttagtcatgataatacgttcaggagccagtcatcaaat |
32385708 |
T |
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| Q |
309 |
catgatagcttccccagaccgtctccaccatcttctatatttactaatactaaccggaaagggctgcagagagaagcagcagcttttgaacctgcggtga |
408 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |
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| T |
32385707 |
catgatagcttccccagaccgtctccaccatcttctatatttactaatactaaccggaaagggctgcagagagatgcagcagcttttgaacctgtggtga |
32385608 |
T |
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| Q |
409 |
aagcgaaagataatgctgtaaattttaaacaaaaggttaacagtggaaacatgttcctgtttgaaaatgatgatgatattactggaccagaaaccccag |
507 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32385607 |
aagcgaaagataatgctgtaaattttaaacaaaaggttaacagtggaaacacgttcctgtttgaaaatgatgatgatattactggaccagaaaccccag |
32385509 |
T |
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