View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13059_low_32 (Length: 265)

Name: NF13059_low_32
Description: NF13059
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13059_low_32
NF13059_low_32
[»] chr5 (48 HSPs)
chr5 (1-250)||(40452472-40452733)
chr5 (4-87)||(28625486-28625569)
chr5 (4-87)||(41534629-41534712)
chr5 (1-87)||(1473362-1473448)
chr5 (3-87)||(12467270-12467355)
chr5 (14-87)||(13060609-13060682)
chr5 (4-77)||(31637091-31637164)
chr5 (4-62)||(41419532-41419590)
chr5 (4-77)||(1868862-1868935)
chr5 (14-87)||(12987021-12987094)
chr5 (3-87)||(29922185-29922269)
chr5 (4-87)||(42706802-42706887)
chr5 (2-87)||(11706913-11706998)
chr5 (17-77)||(3977491-3977551)
chr5 (11-87)||(17657248-17657324)
chr5 (29-77)||(22201958-22202006)
chr5 (28-100)||(43268642-43268714)
chr5 (12-87)||(41059794-41059869)
chr5 (18-77)||(42852038-42852097)
chr5 (3-77)||(6144754-6144828)
chr5 (3-77)||(11912098-11912172)
chr5 (24-77)||(24030231-24030284)
chr5 (4-57)||(35536881-35536934)
chr5 (3-87)||(40697007-40697096)
chr5 (23-87)||(10537235-10537299)
chr5 (11-86)||(7364313-7364388)
chr5 (4-87)||(15122551-15122633)
chr5 (3-77)||(38461278-38461352)
chr5 (28-77)||(1943026-1943075)
chr5 (13-62)||(3520509-3520558)
chr5 (4-69)||(43319027-43319092)
chr5 (4-87)||(13625517-13625601)
chr5 (4-70)||(5559916-5559985)
chr5 (11-77)||(342006-342072)
chr5 (3-77)||(1576647-1576720)
chr5 (3-77)||(1608095-1608168)
chr5 (4-62)||(28357172-28357230)
chr5 (30-87)||(17128284-17128341)
chr5 (3-87)||(2878673-2878756)
chr5 (3-55)||(39154757-39154809)
chr5 (30-77)||(11163292-11163339)
chr5 (5-87)||(18602609-18602691)
chr5 (1-59)||(2577423-2577481)
chr5 (3-87)||(7110983-7111063)
chr5 (30-71)||(2670097-2670138)
chr5 (33-70)||(6150400-6150437)
chr5 (1-77)||(14243839-14243916)
chr5 (33-86)||(43265967-43266020)
[»] chr1 (47 HSPs)
chr1 (3-77)||(6337752-6337826)
chr1 (4-77)||(15515344-15515417)
chr1 (4-75)||(3069851-3069922)
chr1 (6-77)||(26988164-26988235)
chr1 (4-87)||(37329409-37329492)
chr1 (11-77)||(4068131-4068197)
chr1 (3-77)||(41196706-41196780)
chr1 (4-77)||(16888963-16889035)
chr1 (3-76)||(28690021-28690094)
chr1 (11-87)||(37712074-37712149)
chr1 (11-87)||(48819305-48819381)
chr1 (4-87)||(35590136-35590219)
chr1 (15-87)||(18327530-18327602)
chr1 (1-62)||(23544822-23544883)
chr1 (3-87)||(1005346-1005430)
chr1 (11-87)||(36422985-36423061)
chr1 (11-86)||(13038954-13039029)
chr1 (4-70)||(26946101-26946167)
chr1 (30-74)||(1565405-1565449)
chr1 (4-87)||(45267471-45267555)
chr1 (4-62)||(39658320-39658378)
chr1 (30-87)||(10365177-10365234)
chr1 (3-87)||(41003393-41003477)
chr1 (5-62)||(47413403-47413460)
chr1 (3-87)||(31378747-31378831)
chr1 (4-87)||(35282591-35282674)
chr1 (16-70)||(39941533-39941587)
chr1 (4-62)||(49971282-49971340)
chr1 (32-77)||(10850096-10850141)
chr1 (4-73)||(46500998-46501067)
chr1 (11-62)||(9572788-9572839)
chr1 (11-62)||(18317032-18317083)
chr1 (4-87)||(28122622-28122705)
chr1 (4-87)||(32497269-32497351)
chr1 (4-87)||(51162275-51162358)
chr1 (30-76)||(1265716-1265762)
chr1 (29-87)||(35897645-35897703)
chr1 (16-70)||(39941393-39941446)
chr1 (25-71)||(39941463-39941509)
chr1 (4-70)||(41130017-41130083)
chr1 (11-77)||(46473110-46473176)
chr1 (4-62)||(50919518-50919576)
chr1 (30-87)||(10082256-10082313)
chr1 (4-77)||(17628422-17628494)
chr1 (11-87)||(26435179-26435254)
chr1 (31-87)||(26936865-26936920)
chr1 (23-87)||(51409723-51409787)
[»] chr3 (34 HSPs)
chr3 (4-87)||(43079931-43080014)
chr3 (4-87)||(52021252-52021336)
chr3 (3-77)||(52421137-52421211)
chr3 (4-77)||(29270377-29270450)
chr3 (4-77)||(53218037-53218110)
chr3 (4-87)||(22809190-22809274)
chr3 (4-76)||(34707710-34707782)
chr3 (4-87)||(585026-585109)
chr3 (4-87)||(40240574-40240657)
chr3 (4-87)||(40581073-40581157)
chr3 (11-77)||(3845871-3845937)
chr3 (3-77)||(10521170-10521244)
chr3 (3-77)||(10667414-10667488)
chr3 (11-77)||(23816175-23816240)
chr3 (5-87)||(51409399-51409481)
chr3 (11-87)||(3870230-3870306)
chr3 (4-87)||(10448780-10448863)
chr3 (3-62)||(20365431-20365490)
chr3 (4-86)||(42956176-42956258)
chr3 (4-77)||(45331292-45331365)
chr3 (4-76)||(48597864-48597936)
chr3 (10-76)||(7292697-7292763)
chr3 (3-77)||(11528907-11528981)
chr3 (11-76)||(32900732-32900797)
chr3 (11-86)||(10272129-10272202)
chr3 (6-77)||(2086690-2086761)
chr3 (1-87)||(24842101-24842187)
chr3 (3-77)||(36182519-36182594)
chr3 (25-87)||(5129833-5129895)
chr3 (11-61)||(43069078-43069128)
chr3 (4-69)||(28741211-28741276)
chr3 (4-77)||(29614210-29614282)
chr3 (5-62)||(29002743-29002802)
chr3 (15-87)||(30473151-30473223)
[»] chr2 (33 HSPs)
chr2 (3-77)||(33321308-33321382)
chr2 (3-87)||(4026932-4027015)
chr2 (5-75)||(36501513-36501583)
chr2 (5-74)||(2790068-2790137)
chr2 (4-71)||(39592271-39592338)
chr2 (13-87)||(25836718-25836792)
chr2 (4-87)||(887418-887501)
chr2 (4-87)||(21788463-21788546)
chr2 (11-75)||(12442831-12442895)
chr2 (12-76)||(13056332-13056396)
chr2 (4-87)||(29774751-29774834)
chr2 (11-77)||(11777000-11777066)
chr2 (3-75)||(755737-755810)
chr2 (11-71)||(12223874-12223934)
chr2 (4-68)||(38216044-38216108)
chr2 (4-87)||(4090495-4090578)
chr2 (22-75)||(33321418-33321471)
chr2 (18-87)||(34913401-34913470)
chr2 (12-77)||(42839326-42839390)
chr2 (4-77)||(43787800-43787873)
chr2 (3-62)||(735995-736054)
chr2 (3-62)||(5903564-5903623)
chr2 (3-62)||(12267028-12267087)
chr2 (4-87)||(12683603-12683686)
chr2 (24-77)||(11072961-11073015)
chr2 (4-62)||(42064882-42064940)
chr2 (4-87)||(4004825-4004908)
chr2 (3-62)||(16108118-16108177)
chr2 (4-77)||(8832470-8832546)
chr2 (25-87)||(12238501-12238563)
chr2 (13-74)||(13097936-13097998)
chr2 (15-87)||(32366156-32366227)
chr2 (3-87)||(37409649-37409733)
[»] chr8 (29 HSPs)
chr8 (4-77)||(35168438-35168511)
chr8 (4-77)||(34286561-34286633)
chr8 (3-87)||(32975693-32975777)
chr8 (12-87)||(28879064-28879139)
chr8 (4-87)||(32131446-32131529)
chr8 (3-59)||(10298922-10298978)
chr8 (15-87)||(35453416-35453488)
chr8 (4-75)||(24350516-24350587)
chr8 (4-76)||(9131125-9131197)
chr8 (4-77)||(16972353-16972427)
chr8 (26-87)||(13265490-13265551)
chr8 (3-87)||(35285934-35286018)
chr8 (30-87)||(32213045-32213102)
chr8 (11-87)||(38895665-38895741)
chr8 (15-77)||(14709544-14709606)
chr8 (3-77)||(14942440-14942514)
chr8 (4-87)||(8216900-8216985)
chr8 (3-87)||(13131436-13131529)
chr8 (15-87)||(2669654-2669726)
chr8 (11-87)||(8752812-8752888)
chr8 (3-87)||(19327873-19327956)
chr8 (4-52)||(25333729-25333776)
chr8 (3-87)||(42363313-42363396)
chr8 (4-67)||(24866948-24867011)
chr8 (25-87)||(1089019-1089081)
chr8 (5-87)||(12607086-12607167)
chr8 (3-52)||(25465843-25465891)
chr8 (4-61)||(32924209-32924266)
chr8 (30-74)||(24087189-24087233)
[»] chr4 (50 HSPs)
chr4 (4-87)||(28074371-28074453)
chr4 (3-87)||(29877645-29877729)
chr4 (4-87)||(7148778-7148861)
chr4 (4-87)||(48591421-48591504)
chr4 (4-70)||(17222852-17222918)
chr4 (3-87)||(23297444-23297525)
chr4 (11-76)||(35124404-35124469)
chr4 (4-77)||(46704267-46704340)
chr4 (4-87)||(23335648-23335731)
chr4 (4-87)||(52274117-52274200)
chr4 (4-87)||(1374359-1374443)
chr4 (4-77)||(43699478-43699553)
chr4 (3-77)||(948088-948163)
chr4 (11-87)||(12495648-12495726)
chr4 (9-87)||(212950-213027)
chr4 (21-87)||(8130494-8130560)
chr4 (3-77)||(18424274-18424347)
chr4 (3-77)||(38345818-38345891)
chr4 (4-77)||(32628794-32628867)
chr4 (4-77)||(41228919-41228992)
chr4 (3-75)||(488380-488452)
chr4 (11-87)||(7206590-7206666)
chr4 (4-60)||(28663606-28663662)
chr4 (24-87)||(896976-897039)
chr4 (4-87)||(36740910-36740993)
chr4 (11-73)||(18630899-18630961)
chr4 (4-70)||(21216325-21216391)
chr4 (4-58)||(36255033-36255087)
chr4 (3-76)||(2405205-2405277)
chr4 (6-87)||(27368151-27368232)
chr4 (11-87)||(42611872-42611948)
chr4 (11-87)||(825688-825764)
chr4 (4-70)||(19725316-19725382)
chr4 (5-87)||(39932752-39932834)
chr4 (11-76)||(2494404-2494469)
chr4 (4-69)||(35405708-35405773)
chr4 (25-77)||(4331353-4331405)
chr4 (3-87)||(8601207-8601291)
chr4 (3-43)||(22273830-22273870)
chr4 (11-87)||(55638085-55638161)
chr4 (30-77)||(3564236-3564283)
chr4 (4-87)||(4603329-4603411)
chr4 (11-86)||(8057092-8057167)
chr4 (30-72)||(29997333-29997375)
chr4 (7-77)||(43415289-43415359)
chr4 (11-77)||(45018549-45018615)
chr4 (28-77)||(48686965-48687014)
chr4 (22-62)||(33533959-33533999)
chr4 (24-56)||(40699393-40699425)
chr4 (2-62)||(43740071-43740130)
[»] chr7 (31 HSPs)
chr7 (4-87)||(29378651-29378734)
chr7 (11-74)||(30181569-30181632)
chr7 (4-87)||(47511049-47511132)
chr7 (3-87)||(44613469-44613553)
chr7 (12-74)||(6406877-6406939)
chr7 (4-74)||(14691296-14691366)
chr7 (4-87)||(29390548-29390630)
chr7 (4-87)||(20888579-20888663)
chr7 (3-70)||(14536905-14536972)
chr7 (11-87)||(34922937-34923015)
chr7 (28-69)||(40629438-40629479)
chr7 (4-87)||(41094224-41094305)
chr7 (3-86)||(32917588-32917671)
chr7 (4-87)||(38372564-38372647)
chr7 (3-62)||(43391752-43391811)
chr7 (4-62)||(39279460-39279518)
chr7 (11-60)||(17944686-17944735)
chr7 (25-77)||(7098118-7098170)
chr7 (31-87)||(41037759-41037814)
chr7 (4-87)||(41677380-41677464)
chr7 (4-55)||(16012736-16012787)
chr7 (4-55)||(18855267-18855318)
chr7 (4-87)||(22575592-22575675)
chr7 (4-87)||(35809096-35809179)
chr7 (4-87)||(48021645-48021727)
chr7 (13-67)||(31613671-31613725)
chr7 (15-58)||(37779290-37779335)
chr7 (4-69)||(14675957-14676021)
chr7 (42-87)||(33288134-33288179)
chr7 (7-44)||(48949769-48949806)
chr7 (3-87)||(23119916-23120000)
[»] chr6 (32 HSPs)
chr6 (4-87)||(7267781-7267864)
chr6 (4-75)||(8014806-8014877)
chr6 (11-87)||(2027180-2027256)
chr6 (3-87)||(2255740-2255824)
chr6 (11-87)||(21025231-21025307)
chr6 (11-87)||(24625857-24625933)
chr6 (4-87)||(2034226-2034309)
chr6 (4-77)||(10874002-10874073)
chr6 (4-60)||(25430762-25430819)
chr6 (4-87)||(3210993-3211081)
chr6 (15-87)||(10755288-10755360)
chr6 (11-77)||(1240614-1240681)
chr6 (4-87)||(21891335-21891418)
chr6 (4-60)||(13429488-13429544)
chr6 (6-74)||(34509931-34509999)
chr6 (3-87)||(9202395-9202483)
chr6 (4-87)||(32675886-32675969)
chr6 (4-70)||(16589774-16589840)
chr6 (4-70)||(16605540-16605606)
chr6 (14-87)||(6632665-6632738)
chr6 (30-87)||(10054387-10054444)
chr6 (4-69)||(21610046-21610111)
chr6 (30-87)||(30533986-30534043)
chr6 (11-87)||(6776814-6776890)
chr6 (4-68)||(6958649-6958713)
chr6 (31-87)||(12817116-12817172)
chr6 (26-77)||(2040205-2040256)
chr6 (3-58)||(18078242-18078297)
chr6 (3-77)||(7446858-7446932)
chr6 (4-62)||(7576858-7576916)
chr6 (30-87)||(6758633-6758690)
chr6 (3-87)||(3829915-3829999)
[»] scaffold0157 (1 HSPs)
scaffold0157 (11-87)||(24751-24829)
[»] scaffold0024 (1 HSPs)
scaffold0024 (16-87)||(97215-97286)
[»] scaffold0057 (2 HSPs)
scaffold0057 (4-73)||(24386-24455)
scaffold0057 (33-87)||(43842-43896)
[»] scaffold0041 (1 HSPs)
scaffold0041 (4-87)||(108991-109072)
[»] scaffold0512 (1 HSPs)
scaffold0512 (17-77)||(4081-4141)
[»] scaffold0332 (1 HSPs)
scaffold0332 (4-77)||(14743-14816)
[»] scaffold1367 (1 HSPs)
scaffold1367 (11-87)||(1064-1140)
[»] scaffold0299 (1 HSPs)
scaffold0299 (11-87)||(11304-11380)
[»] scaffold0012 (1 HSPs)
scaffold0012 (4-87)||(178506-178590)


Alignment Details
Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 40452472 - 40452733
Alignment:
Q  1 cgaaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcatacgc---------- 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||              
T  40452472 cgaaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcataagctcgaaaataa 40452571  T
Q  91 --caatcgaaacgggccctaatctaaaacttaactctaaacactcaatctgaattccgtgcaatgatgataagggaatcaagggtaagatagaatctcaa 188  Q
      ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40452572 gccaatcgaaacgggccctaatctaaaacttaactctaaacgctcaatctgaattccgtgcaatgatgataagggaatcaagggtaagatagaatctcaa 40452671  T
Q  189 aatccacacttcaaaatcaagcaacaacgaaagattaaacttcaacaataagctaagctatt 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40452672 aatccacacttcaaaatcaagcaacaacgaaagattaaacttcaacaataagctaagctatt 40452733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 28625569 - 28625486
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||  ||||||||    
T  28625569 aaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataatacttaaaagcttatttatttgcata 28625486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 41534712 - 41534629
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  41534712 aaaattgtatcttcataagctgttttttcgtaaactaccttgacaagcttatgaataatacataaaagcttatttatttgcata 41534629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 1473448 - 1473362
Alignment:
Q  1 cgaaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||| |||||||||||||||||| |||||||| || ||||||||||||||||||||| ||||||||||||||  ||||||||    
T  1473448 cgaaaaattgtatcttcataagctgttttttcataaattaacttgacaagcttatgaataatacataaaagcttatttatttgcata 1473362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 12467355 - 12467270
Alignment:
Q  3 aaaaattatatcttcataagctgtttctt-cataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| | |||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  12467355 aaaaattgtctcttcataagctgtttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcata 12467270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 13060609 - 13060682
Alignment:
Q  14 cttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||||||    
T  13060609 cttcataagctgttttttcataaactaccttgacaagcttatgaacaatacataaaagcttatttatttgcata 13060682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 31637091 - 31637164
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| |||||||||||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||    
T  31637091 aaaattgtatcttcataagctgttctttcataaattaccttgacaagcttatgaataatacataaaagcttatt 31637164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 41419590 - 41419532
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41419590 aaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataat 41419532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 1868935 - 1868862
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| |||||||||||| || || |||||||||||||||||||||||| |||||||| ||||||||||||||    
T  1868935 aaaattgtatcttcataagttgatttttcataaactaccttgacaagcttgtgaataatacataaaagcttatt 1868862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 12987021 - 12987094
Alignment:
Q  14 cttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||| |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||||||    
T  12987021 cttcataaactgttttttcataaactaccttgacaagcttatgaacaatacataaaagcttatttatttgcata 12987094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 29922185 - 29922269
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| ||| | |||||||||| | ||||||||||||||||||||||||||||||||| ||||||| ||||||  ||||||||    
T  29922185 aaaaattgtatatgcataagctgtgttttcataaactaccttgacaagcttatgaataatacataaaaacttatttatttgcata 29922269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 42706887 - 42706802
Alignment:
Q  4 aaaattatatcttcataagctgtttcttc--ataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||||||||| ||   |||||||||||||||||||||||||||||| | ||||||||||||  ||||||||    
T  42706887 aaaattgtatcttcataagctgtttttttttataaactaccttgacaagcttatgaataatacttaaaagcttatttatttgcata 42706802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 11706913 - 11706998
Alignment:
Q  2 gaaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||| |||||||||||| |||||||||||||| ||| |||||||| ||| |||| || ||||||||||||||  ||||||||    
T  11706913 gaaaaattgtatcttcataagttgtttcttcataaaatacattgacaagtttaggaatgatacataaaagcttatttatttgcata 11706998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 3977551 - 3977491
Alignment:
Q  17 cataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||| ||||| |||||    
T  3977551 cataaactgttttttcataaactaccttgacaagcttatgaataatgcacaaaagtttatt 3977491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 17657324 - 17657248
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||||| ||||| ||||||||||||  || |||||||||||||||| ||||||||||||||  ||||||||    
T  17657324 tatcttcataagatgttttttcataaactacaatggcaagcttatgaataatacataaaagcttatttatttgcata 17657248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 22201958 - 22202006
Alignment:
Q  29 cttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22201958 cttcataaactaccttgacaagcttatgaataatacataaaagcttatt 22202006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 43268642 - 43268714
Alignment:
Q  28 tcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcatacgccaatcgaaac 100  Q
    |||||||||||||||||||| ||||||| |||||| ||||||||||||||  |||||||| ||||||| ||||    
T  43268642 tcttcataaactaccttgaccagcttattaataatacataaaagcttatttatttgcataagccaatccaaac 43268714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 41059794 - 41059869
Alignment:
Q  12 atcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||||| || || ||||||||| ||||||| ||||||||||||||| ||||||||||||||  ||||||||    
T  41059794 atcttcataaggtgatttttcataaacaaccttgataagcttatgaataatacataaaagcttatttgtttgcata 41059869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 42852097 - 42852038
Alignment:
Q  18 ataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  42852097 ataagttgttttttcataaactatcttgacaagcttatgaataatacataaaagcttatt 42852038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 6144828 - 6144754
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||||| ||| |||||||||| ||| |||||||| ||||||||||||||||||| ||||  |||||||||||||    
T  6144828 aaaaattgtatattcataagctattttttcataaaataccttgacaagcttatgagtaatatataaaagcttatt 6144754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 11912098 - 11912172
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||||| |||||||||||||| ||| |||| ||||||| |||||||| ||||||| ||| ||||||||||||||    
T  11912098 aaaaattgtatcttcataagctcttttttcacaaactactttgacaagattatgaacaatacataaaagcttatt 11912172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 24030284 - 24030231
Alignment:
Q  24 tgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||||||||||||    
T  24030284 tgttttttcataaactactttgacaagcttatgaataatacataaaagcttatt 24030231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 35536934 - 35536881
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatga 57  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  35536934 aaaattgtatcttcataagctgttttttcataaactatcttgacaagcttatga 35536881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 40697096 - 40697007
Alignment:
Q  3 aaaaattatatcttcataagctgttt-----cttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| ||||||||||||||||||     ||||||||| ||||||||||||||||| |||||| ||||||| ||||||  ||||||||    
T  40697096 aaaaattgtatcttcataagctgttttttttcttcataaaataccttgacaagcttataaataatacataaaaacttatttatttgcata 40697007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 10537235 - 10537299
Alignment:
Q  23 ctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| ||||||||||| |||||||||||||| |||||| ||||||||||||||  ||||||||    
T  10537235 ctgttttttcataaactatcttgacaagcttataaataatacataaaagcttatttatttgcata 10537299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 7364313 - 7364388
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcat 86  Q
    |||||||||||| ||||| || |||||||||||| |||||||||||||||||  ||| |||||||||  |||||||    
T  7364313 tatcttcataagttgtttgttgataaactaccttaacaagcttatgaataataaatagaagcttatttttttgcat 7364388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 15122633 - 15122551
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| ||||||||||| |||||| ||||||||||||||| | || ||||| |||||| ||||||| |||||| |||||||||    
T  15122633 aaaattgtatcttcataaactgttttttcataaactacctt-aaaaacttataaataatacataaaaacttatttctttgcata 15122551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 38461278 - 38461352
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||||||||||||||||| |||||| |||||||| ||| || |||| ||||| |||||| |||||| |||||||    
T  38461278 aaaaattatatcttcataaactgttttttcataaaatacatttacaaacttataaataatacataaaggcttatt 38461352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 1943075 - 1943026
Alignment:
Q  28 tcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| ||||||    
T  1943075 tcttcataaactaccttgacaagcttatggataatacataaaaacttatt 1943026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 3520509 - 3520558
Alignment:
Q  13 tcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    ||||||||||||||||  || |||||||||||||||||||||||||||||    
T  3520509 tcttcataagctgttttgtcctaaactaccttgacaagcttatgaataat 3520558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 43319092 - 43319027
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaa 69  Q
    ||||||||| |||||||| |||||| |||||||||||| || |||||||||| |||||| ||||||    
T  43319092 aaaattataccttcataaactgttttttcataaactacattaacaagcttataaataatacataaa 43319027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 13625517 - 13625601
Alignment:
Q  4 aaaattatatcttcataagctgtttct-tcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||| ||||||||||| | |||||||||||||  |||||||||||||||||  |||||||| ||||  ||||||||    
T  13625517 aaaattttatctttataagctgtttttatcataaactacctcaacaagcttatgaataataaataaaagcatatttatttgcata 13625601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 5559916 - 5559985
Alignment:
Q  4 aaaattatatcttcataagctg---tttcttcataaactaccttgacaagcttatgaataatgcataaaa 70  Q
    |||||| |||||||||||||||   ||| |||||||||||||||||| |||||||||| ||| |||||||    
T  5559916 aaaattgtatcttcataagctgcttttttttcataaactaccttgacgagcttatgaagaatacataaaa 5559985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 342072 - 342006
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||||||||||||| || |||||||||||||||| ||| ||| | |||||| ||||||| ||||||    
T  342072 tatcttcataagctgatttttcataaactaccttggcaaacttgtaaataatacataaaaacttatt 342006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 1576720 - 1576647
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||||| |||||||| ||| ||||| | |||||||||| |||||||||||||||| ||| |||||||| |||||    
T  1576720 aaaaattgtatcttcacaagttgtttttccataaactacattgacaagcttatgaa-aatacataaaagtttatt 1576647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 1608095 - 1608168
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||||| |||||||| ||| ||||| | |||||||||| |||||||||||||||| ||| |||||||| |||||    
T  1608095 aaaaattgtatcttcacaagttgtttttccataaactacattgacaagcttatgaa-aatacataaaagtttatt 1608168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 28357230 - 28357172
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    |||||| ||||||||||| |||||| |||||||||||| ||||||||||| | ||||||    
T  28357230 aaaattgtatcttcataacctgttttttcataaactacattgacaagcttttaaataat 28357172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 17128341 - 17128284
Alignment:
Q  30 ttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||||| |||| ||| ||||||||||| ||||||||||||||  ||||||||    
T  17128341 ttcataaactactttgataagtttatgaataatacataaaagcttatttatttgcata 17128284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 2878673 - 2878756
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| ||||||| ||| |||||  ||||||||| || ||||||| ||||||||||||  |||||||||||||  ||||||||    
T  2878673 aaaaattgtatcttc-taaactgttgtttcataaaccacattgacaaacttatgaataatagataaaagcttatttatttgcata 2878756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 39154757 - 39154809
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttat 55  Q
    |||||||  |||||||||| | |||| ||||||||||||||||||||||||||    
T  39154757 aaaaattgcatcttcataatcagttttttcataaactaccttgacaagcttat 39154809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 11163292 - 11163339
Alignment:
Q  30 ttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||||||||||| ||||||||||||||| || ||||||| ||||||    
T  11163292 ttcataaactacctcgacaagcttatgaatcatacataaaaacttatt 11163339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 18602691 - 18602609
Alignment:
Q  5 aaattatatcttcataagctgtttctt-cataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||| ||| |||||||| ||||| || ||||| ||||||| |||||||||||||||||  |||||| |||||| |||||||||    
T  18602691 aaattgtatattcataagttgtttttttcataagctaccttaacaagcttatgaataataaataaaaacttatt-ctttgcata 18602609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 2577423 - 2577481
Alignment:
Q  1 cgaaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaat 59  Q
    ||||||||| ||| || | ||| ||||| |||||||| |||||||||||||||||||||    
T  2577423 cgaaaaattgtatttttacaagttgttttttcataaattaccttgacaagcttatgaat 2577481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 7110983 - 7111063
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| |||||||||||||||||| ||||||||||   ||||||| ||||||||||||  |||| | ||||||  ||||||||    
T  7110983 aaaaattgtatcttcataagctgttt-ttcataaact---ttgacaatcttatgaataataaataagaacttatttatttgcata 7111063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 2670138 - 2670097
Alignment:
Q  30 ttcataaactaccttgacaagcttatgaataatgcataaaag 71  Q
    |||||||||||||||||||| |||||||||| | ||||||||    
T  2670138 ttcataaactaccttgacaaacttatgaatagtacataaaag 2670097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 6150437 - 6150400
Alignment:
Q  33 ataaactaccttgacaagcttatgaataatgcataaaa 70  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  6150437 ataaactaccttgacaaacttatgaataatacataaaa 6150400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14243916 - 14243839
Alignment:
Q  1 cgaaaaattatatcttcataagctgtttctt-cataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||||||| ||| |||||||||||||| || ||||||||||||| |  | |||||||||| | |||| |||||||||    
T  14243916 cgaaaaattgtattttcataagctgttttttccataaactaccttaaacaacttatgaatattacatagaagcttatt 14243839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 43265967 - 43266020
Alignment:
Q  33 ataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcat 86  Q
    |||||||| ||| |||||||||||||| || ||||||||||||||  |||||||    
T  43265967 ataaactatcttaacaagcttatgaatgatacataaaagcttatttatttgcat 43266020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 6337752 - 6337826
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6337752 aaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataatacataaaagcttatt 6337826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 15515344 - 15515417
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15515344 aaaattgtatcttcataagctcttttttcataaactaccttgacaagcttatgaataatacataaaagcttatt 15515417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 3069851 - 3069922
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagctta 75  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||    
T  3069851 aaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataatacattaaagctta 3069922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 26988235 - 26988164
Alignment:
Q  6 aattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  26988235 aattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataagacataaaagcttatt 26988164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 37329409 - 37329492
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||| |||  ||||||||    
T  37329409 aaaattgtatcttcataagctgttttttcataaactaccttgacaagtttatgaataatacataaaagctcatttatttgcata 37329492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 4068197 - 4068131
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4068197 tatcttcataagttgttttttcataaactaccttgacaagcttatgaataatacataaaagcttatt 4068131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 41196706 - 41196780
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||| ||||||    
T  41196706 aaaaattgtatcttcataagctgttttttcataaactacattgacaagcttatgaataatacataaaaacttatt 41196780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 16888963 - 16889035
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  16888963 aaaattgtatcttcataagctgttttttcataaactacctt-acaagcttatgaataatacataaaagcttatt 16889035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 28690094 - 28690021
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttat 76  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||| |||||    
T  28690094 aaaaattgtatcttcataagctgtttgttcataaactaccttgacaaacttatgaataatacataaaaccttat 28690021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 37712149 - 37712074
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  37712149 tatcttcataagttgttttttcataaactaccttgacaagcttatgaat-atacataaaagcttattcatttgcata 37712074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 48819381 - 48819305
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||| |||  ||||||||    
T  48819381 tatcttcataagctgttttttcataaactaccttgacaagcttatgaataatacattaaagctcatttatttgcata 48819305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 35590219 - 35590136
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||||||||| ||||||||| |||||||||||||||||||  || ||||||||||||||  ||||||||    
T  35590219 aaaattgtatcttcataagctgttttttcataaacaaccttgacaagcttatgaactatacataaaagcttatttatttgcata 35590136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 18327602 - 18327530
Alignment:
Q  15 ttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||||||| ||||||||||| |||||||||||||||| |||| ||||||||||||||  ||||||||    
T  18327602 ttcataagctgttttttcataaactatcttgacaagcttatgagtaatacataaaagcttatttatttgcata 18327530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23544883 - 23544822
Alignment:
Q  1 cgaaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    ||||||| | ||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  23544883 cgaaaaaatgtattttcataagctgttttttcataaactaccttgacaagcttatgaataat 23544822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 1005430 - 1005346
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| ||||||||||||  |||| ||||| |||||||| |||||||||||||||||| | ||||||||||||  ||||||||    
T  1005430 aaaaattgtatcttcataagtagttttttcattaactacctagacaagcttatgaataatacgtaaaagcttatttatttgcata 1005346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 36422985 - 36423061
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||||| ||||| ||||||||||||||| |||| ||||||||||||  |||||||||||||  ||||||||    
T  36422985 tatcttcataagttgtttattcataaactaccttaacaaacttatgaataataaataaaagcttatttatttgcata 36423061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 13039029 - 13038954
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcat 86  Q
    |||||||||||| ||||| ||||||||||||||| ||||||| |||||||||  |||||||||||||  |||||||    
T  13039029 tatcttcataagttgttttttcataaactaccttaacaagctcatgaataatatataaaagcttatttatttgcat 13038954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 26946101 - 26946167
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaa 70  Q
    |||||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||||  |||||||    
T  26946101 aaaattgtatcttcataagttgttttttcataaactaccttaacaagcttatgaataacacataaaa 26946167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 1565405 - 1565449
Alignment:
Q  30 ttcataaactaccttgacaagcttatgaataatgcataaaagctt 74  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  1565405 ttcataaactaccttgacaagcttacgaataatgcataaaagctt 1565449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 45267555 - 45267471
Alignment:
Q  4 aaaattatatcttcataagctgtttctt-cataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||||||||| || ||||||||||||||||||||| || |||||| |  |||||||||||  ||||||||    
T  45267555 aaaattgtatcttcataagctgtttttttcataaactaccttgacaagctaataaataatactaaaaagcttatttatttgcata 45267471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 39658320 - 39658378
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    |||||| || ||||||||||||||| |||||||| ||||||| ||||||||||||||||    
T  39658320 aaaattgtaccttcataagctgttttttcataaattaccttggcaagcttatgaataat 39658378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 10365234 - 10365177
Alignment:
Q  30 ttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||||| ||||||||||||| |||||| |||||||| |||||| ||||||||    
T  10365234 ttcataaactactttgacaagcttattaataatacataaaagtttattcatttgcata 10365177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 41003477 - 41003393
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactacc-ttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||||||||  |||||||||| ||||||||||||| ||||||| ||||| |||||| ||||||| ||||||  ||||||||    
T  41003477 aaaaattatatcttagtaagctgttt-ttcataaactacctttgacaaacttataaataatacataaaaacttatttatttgcata 41003393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 47413460 - 47413403
Alignment:
Q  5 aaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    ||||||||||||||||| |||||  |||||||||||| ||||||||||||| ||||||    
T  47413460 aaattatatcttcataacctgttatttcataaactacattgacaagcttataaataat 47413403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 31378747 - 31378831
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| |||||| |||| |  ||| |||||||||||||||||||||||| | ||||||  |||||||||||||  ||||||||    
T  31378747 aaaaattgtatctttataaacgtttttttcataaactaccttgacaagcttgttaataatatataaaagcttatttatttgcata 31378831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 35282591 - 35282674
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||| ||||| ||||||||||||||| ||| | |||| ||||||  ||||| |||||||  ||||||||    
T  35282591 aaaattttatcttcataagttgttttttcataaactaccttaacatgtttataaataataaataaacgcttatttatttgcata 35282674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 39941587 - 39941533
Alignment:
Q  16 tcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaa 70  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||||| |||||||    
T  39941587 tcataagttgttttttcattaactactttgacaagcttatgaataatacataaaa 39941533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 49971340 - 49971282
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    |||||| ||||||| |||||||||| |||||||||||| || |||||||||| ||||||    
T  49971340 aaaattgtatcttcgtaagctgttttttcataaactacattaacaagcttataaataat 49971282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 10850096 - 10850141
Alignment:
Q  32 cataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||||    
T  10850096 cataaactacgttgacaaccttatgaataatacataaaagcttatt 10850141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 46500998 - 46501067
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagct 73  Q
    |||||| ||||||||||| || ||| ||||||||||||  |||||||||||| |||||| || |||||||    
T  46500998 aaaattgtatcttcataacctattttttcataaactacaatgacaagcttataaataatacaaaaaagct 46501067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 9572788 - 9572839
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    |||||||||||  ||||| ||||||||||||||| |||| ||||||||||||    
T  9572788 tatcttcataaattgttttttcataaactaccttaacaaacttatgaataat 9572839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 18317083 - 18317032
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    |||||||||| | ||||| ||||||| |||||||||||| ||||||||||||    
T  18317083 tatcttcataggatgttttttcataacctaccttgacaatcttatgaataat 18317032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 28122705 - 28122622
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||| ||||| | ||| ||||||||||||||| | ||||| |||||||||  ||||||||| |||  ||||||||    
T  28122705 aaaattttatctttataagttattttttcataaactaccttaagaagctcatgaataataaataaaagctaatttatttgcata 28122622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 32497269 - 32497351
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||| |||||| |||||| ||||||||||||||| | || ||||| |||||| ||||||| ||||||  ||||||||    
T  32497269 aaaattgtatcctcataaactgttttttcataaactacctt-aaaaacttataaataatacataaaaacttatttatttgcata 32497351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 51162358 - 51162275
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| ||| |||||||| ||||| ||||||||||||||| |||| ||| | |||||| ||| || |||||||  ||||||||    
T  51162358 aaaattgtatattcataagttgttttttcataaactaccttaacaaacttgtaaataatacattaatgcttatttatttgcata 51162275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 1265716 - 1265762
Alignment:
Q  30 ttcataaactaccttgacaagcttatgaataatgcataaaagcttat 76  Q
    ||||||||||||||||||||  ||||||||||| ||||||| |||||    
T  1265716 ttcataaactaccttgacaaaattatgaataatacataaaatcttat 1265762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 35897645 - 35897703
Alignment:
Q  29 cttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||||||| |||| |||||||||||||||  |||||| ||||||  ||||||||    
T  35897645 cttcataaactactttgaaaagcttatgaataataaataaaaacttatttatttgcata 35897703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 39941446 - 39941393
Alignment:
Q  16 tcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaa 70  Q
    ||||||| ||||| ||||||| |||| |||||||||||||||||||| |||||||    
T  39941446 tcataagttgttttttcataa-ctactttgacaagcttatgaataatacataaaa 39941393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 39941509 - 39941463
Alignment:
Q  25 gtttcttcataaactaccttgacaagcttatgaataatgcataaaag 71  Q
    |||| |||||||||||  |||||||||||||||||||| ||||||||    
T  39941509 gttttttcataaactattttgacaagcttatgaataatacataaaag 39941463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 41130083 - 41130017
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaa 70  Q
    |||||| |||||||||||| |||||   ||||||| |||| || ||||||||||||||| |||||||    
T  41130083 aaaattgtatcttcataagttgttttgacataaaccacctagagaagcttatgaataatacataaaa 41130017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 46473176 - 46473110
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||||||||| ||||| |||||| |||||||| | || || |||||||||  |||||||||||||    
T  46473176 tatcttcataagttgttttttcatatactaccttaaaaacctcatgaataataaataaaagcttatt 46473110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 50919576 - 50919518
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    |||||| ||||||||||| |||||| || ||||||||| ||||||| ||||| ||||||    
T  50919576 aaaattgtatcttcataacctgtttttttataaactacattgacaaacttataaataat 50919518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 10082313 - 10082256
Alignment:
Q  30 ttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||||||||||||| ||||| |||||  ||||||| ||||||  ||||||||    
T  10082313 ttcataaactaccttgacaaacttatcaataacacataaaaacttatttatttgcata 10082256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 17628422 - 17628494
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| ||||||||||| | |||| ||||||||||||||| | || ||||| |||||| ||||||| ||||||    
T  17628422 aaaattgtatcttcataaacggttttttcataaactacctt-aaaaacttataaataatacataaaaacttatt 17628494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 26435179 - 26435254
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||||| | |||| |||||||||||| ||||||| ||||  |||||| ||||||| ||||||  ||||||||    
T  26435179 tatcttcataaacagttttttcataaactactttgacaaacttaaaaataatacataaaa-cttatttatttgcata 26435254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 26936920 - 26936865
Alignment:
Q  31 tcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||||||||||||||||||||| | || |||| |||||||||  ||||||||    
T  26936920 tcataaactaccttgacaagcttatgagt-atacatagaagcttatttatttgcata 26936865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 51409723 - 51409787
Alignment:
Q  23 ctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||| |||||||||||||| || |||| |||||||||||| |||| || ||||||  ||||||||    
T  51409723 ctgtatcttcataaactacatttacaaacttatgaataatacatacaaacttatttatttgcata 51409787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 43079931 - 43080014
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||    
T  43079931 aaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataacacataaaagcttatttatttgcata 43080014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 52021336 - 52021252
Alignment:
Q  4 aaaattatatcttcataagctgtttctt-cataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||| ||||||||| ||||  ||||||||    
T  52021336 aaaattatatcttcataagctgtttttttcataaactaccttgacaatcttatgaataatacataaaagcatatttatttgcata 52021252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 52421137 - 52421211
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||||| ||||||||| | || ||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  52421137 aaaaattgtatcttcattaactattttttcataaactaccttgacaagcttatgaataatacataaaagcttatt 52421211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 29270450 - 29270377
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| |||||||||||||||||| |||||||| || ||||| ||||||||||||||| ||||||||||||||    
T  29270450 aaaattgtatcttcataagctgttttttcataaattatcttgaaaagcttatgaataatacataaaagcttatt 29270377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 53218037 - 53218110
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  53218037 aaaattgtatcttcaaaagttgttttttcataaactaccttgacaagcttatgaataatacataaaatcttatt 53218110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 22809190 - 22809274
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcat-aaaagcttattcctttgcata 87  Q
    |||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||  || |||||||||||  ||||||||    
T  22809190 aaaattgtatcttcataagcagttttttcataaactaccttgacaagcttatgaataatatataaaaagcttatttatttgcata 22809274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 34707710 - 34707782
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttat 76  Q
    |||||| ||||||| | |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  34707710 aaaattgtatcttcgttagctgttttttcataaactaccttaacaagcttatgaataatacataaaagcttat 34707782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 585109 - 585026
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||| ||||| ||||||||||||||  | |||||| |||||||||||||||||||||||  ||||||||    
T  585109 aaaattgtatcttcataagttgttttttcataaactacctcaagaagcttttgaataatgcataaaagcttatttatttgcata 585026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 40240574 - 40240657
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||| ||||| |||||||||||||| |||| ||||||||||||| ||||||||||| ||  ||||||||    
T  40240574 aaaattgtatcttcataagttgttttttcataaactacctagacacgcttatgaataatacataaaagcttctttatttgcata 40240657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 40581073 - 40581157
Alignment:
Q  4 aaaattatatcttcataagctgtttctt-cataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| | |||||||| ||||||| || |||||||||||||||||||||||| |||||| ||||||||||||||  ||||||||    
T  40581073 aaaattgtttcttcatacgctgtttttttcataaactaccttgacaagcttattaataatacataaaagcttatttatttgcata 40581157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 3845937 - 3845871
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||||||| |||||||  |||||||||| |||||||||||||||||||||  |||||||||||||    
T  3845937 tatcttcatatgctgttttgtcataaactagcttgacaagcttatgaataatatataaaagcttatt 3845871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 10521244 - 10521170
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||| ||||||||||||||  ||||  |||||||||||| |||||||||||||||||||| |||| |||||||||    
T  10521244 aaaagttatatcttcataaaatgttgtttcataaactacattgacaagcttatgaataatacatataagcttatt 10521170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 10667488 - 10667414
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||| ||||||||||||||  ||||  |||||||||||| |||||||||||||||||||| |||| |||||||||    
T  10667488 aaaagttatatcttcataaaatgttgtttcataaactacattgacaagcttatgaataatacatataagcttatt 10667414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 23816175 - 23816240
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||||||||||||||| |||||||||||||||||  ||||||||||||||  |||||||||||||    
T  23816175 tatcttcataagctgttttttcataaactaccttgaatagcttatgaataat-aataaaagcttatt 23816240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 51409481 - 51409399
Alignment:
Q  5 aaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||| |||||||||||| ||||| |||||||||||||||||||| || |||||||||  ||||||| |||||  ||||||||    
T  51409481 aaattttatcttcataagttgttttttcataaactaccttgacaaactcatgaataataaataaaagattatttatttgcata 51409399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 3870230 - 3870306
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||| ||||| | ||||| ||||||||||||||||||||||||||||| ||  ||||||||||||||  ||||||||    
T  3870230 tatcatcatatgttgttttttcataaactaccttgacaagcttatgaacaaaacataaaagcttatttttttgcata 3870306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 10448863 - 10448780
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||| |||||||| |||||| |||||||||||| || |||||||||| |||||| |||||| || ||||  ||||||||    
T  10448863 aaaattataccttcataaactgttttttcataaactacattaacaagcttataaataatacataaaggcatatttatttgcata 10448780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 20365431 - 20365490
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    ||||||||||||||||||| ||| || |||||||| ||| ||||||||||||||||||||    
T  20365431 aaaaattatatcttcataaactgctttttcataaagtactttgacaagcttatgaataat 20365490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 42956176 - 42956258
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcat 86  Q
    |||||| |||||| |||||||||||  ||||||||||| | |||||| ||||||||||| ||||||| ||||||  |||||||    
T  42956176 aaaattgtatctttataagctgttttatcataaactacttcgacaagtttatgaataatacataaaaacttatttatttgcat 42956258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 45331292 - 45331365
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| |||||||||||| ||||| ||||||||||  ||| ||||||||||| ||||| |||||||| |||||    
T  45331292 aaaattgtatcttcataagatgttttttcataaactgtcttaacaagcttatgcataatacataaaaggttatt 45331365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 48597864 - 48597936
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttat 76  Q
    |||||| |||||||||||| ||||| |||||| ||||||| ||||| ||||||||||||  ||||||| ||||    
T  48597864 aaaattgtatcttcataagttgttttttcatacactacctcgacaaacttatgaataatttataaaagtttat 48597936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 7292763 - 7292697
Alignment:
Q  10 atatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttat 76  Q
    ||||| |||||| |||||| |||||||||||  ||||||| |||||||||||| ||||| |||||||    
T  7292763 atatcatcataaactgttttttcataaactatattgacaaacttatgaataatacataagagcttat 7292697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 11528981 - 11528907
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||||||||||||||||  | |||  ||||||||||| || ||||  ||||||||||| ||||||||||||||    
T  11528981 aaaaattatatcttcataattttttttatcataaactacattaacaaatttatgaataatacataaaagcttatt 11528907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 32900732 - 32900797
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttat 76  Q
    |||||||||||| | ||| |||| |||||||||| ||||| |||||||||||  ||||||||||||    
T  32900732 tatcttcataagttattttttcacaaactaccttaacaagtttatgaataataaataaaagcttat 32900797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 10272202 - 10272129
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcat 86  Q
    |||| ||||||||||||| |||| ||||| ||||||  |||||||||||||| |||||||| |||||  |||||||    
T  10272202 tatcctcataagctgttttttcagaaactgccttga--agcttatgaataatacataaaagtttatttatttgcat 10272129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 2086690 - 2086761
Alignment:
Q  6 aattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||| ||||||||||| || ||| ||||||||| ||||| ||||| |||| |||||| |||||||| |||||    
T  2086690 aattgtatcttcataaactattttttcataaaccacctttacaagattataaataatacataaaagtttatt 2086761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24842101 - 24842187
Alignment:
Q  1 cgaaaaattatatcttcataagctgtttcttcataaactacctt-gacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||| |||||||||||| ||||| |||||||| ||| || ||||| |||||||||||| |||||||  |||||  ||||||||    
T  24842101 cgaaaaattgtatcttcataagttgttt-ttcataaattacatttgacaaacttatgaataatacataaaaatttatttatttgcata 24842187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 36182594 - 36182519
Alignment:
Q  3 aaaaattatatcttcataagct-gtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||||||||| |||||||||| |||| |||||| ||||| | || |||||||||||||||  |||||| ||||||    
T  36182594 aaaaattatatattcataagctagttttttcatatactacttcgaaaagcttatgaataataaataaaaacttatt 36182519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 5129833 - 5129895
Alignment:
Q  25 gtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||| |||||||| ||| |||||||||||||||||||| ||| ||| ||||||  ||||||||    
T  5129833 gttttttcataaagtacattgacaagcttatgaataatacattaaaacttatttatttgcata 5129895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 43069128 - 43069078
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataa 61  Q
    |||| |||||||||||||  |||||||||| |||||||| |||||||||||    
T  43069128 tatcctcataagctgttttctcataaactatcttgacaaacttatgaataa 43069078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 28741211 - 28741276
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaa 69  Q
    |||||| || |||||||| |||||| |||||||||||| || |||||||||| | |||| ||||||    
T  28741211 aaaattgtaccttcataatctgttttttcataaactactttaacaagcttataagtaatacataaa 28741276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 29614282 - 29614210
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| ||||||||||| |||||| ||||||||||||||| | ||  |||| |||||| ||||||| ||||||    
T  29614282 aaaattgtatcttcataaactgttttttcataaactacctt-aaaaaattataaataatacataaaaacttatt 29614210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 29002802 - 29002743
Alignment:
Q  5 aaattatatcttcataagctgtttctt--cataaactaccttgacaagcttatgaataat 62  Q
    |||||||||||||||||| | ||| ||  |||||| ||| ||||||||||||||||||||    
T  29002802 aaattatatcttcataagttattttttttcataaattactttgacaagcttatgaataat 29002743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 30473151 - 30473223
Alignment:
Q  15 ttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||| ||||| ||||||||||||||| |||| ||||| |||||| ||| || | |||||  ||||||||    
T  30473151 ttcataagttgttttttcataaactaccttaacaaccttataaataatacattaatgtttatttatttgcata 30473223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 33321308 - 33321382
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  33321308 aaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataagacataaaagcttatt 33321382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 4027015 - 4026932
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||  ||||||||    
T  4027015 aaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatg-ataatacataaaagcttatttatttgcata 4026932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 36501513 - 36501583
Alignment:
Q  5 aaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagctta 75  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||    
T  36501513 aaattttatcttcataagctgttttttcataaactaccttgacaagcttatgaataatacataaaaactta 36501583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 2790068 - 2790137
Alignment:
Q  5 aaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagctt 74  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  2790068 aaattgtatcttcataagctgtttattcataaaataccttgacaagcttatcaataatgcataaaagctt 2790137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 39592338 - 39592271
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaag 71  Q
    |||||||||||||| |||||| | | ||||||||||||||||||||||||||||||||||||||||||    
T  39592338 aaaattatatcttcttaagctttattttcataaactaccttgacaagcttatgaataatgcataaaag 39592271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 25836718 - 25836792
Alignment:
Q  13 tcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| ||||  ||||||||    
T  25836718 tcttcataagccgttttttcataaactaccttgacaagcttatgaataatacataaaagcatatttatttgcata 25836792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 887501 - 887418
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| ||||||||||||| | || | ||||||||||||||||||||||||||||||| || |||||||||||  ||||||||    
T  887501 aaaattgtatcttcataagcaggttttacataaactaccttgacaagcttatgaataatacaaaaaagcttatttatttgcata 887418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 21788546 - 21788463
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||| ||||| ||||||||||| ||| |||||||||||||||||  |||||||||||||  ||||||||    
T  21788546 aaaattttatcttcataagttgttttttcataaactatcttaacaagcttatgaataataaataaaagcttatttatttgcata 21788463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 12442895 - 12442831
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagctta 75  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||||||| | ||||||||||    
T  12442895 tatcttcataagctgctttttcataaactatcttgacaagcttatgaataatacctaaaagctta 12442831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 13056332 - 13056396
Alignment:
Q  12 atcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttat 76  Q
    ||||||||||||| ||| || |||||||||||||||||||||||||| ||| |||||||||||||    
T  13056332 atcttcataagctatttttttataaactaccttgacaagcttatgaaaaatacataaaagcttat 13056396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 29774834 - 29774751
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| ||| ||||||||| |||| ||||||||||||||| |||| || |||||||||||||||||| |||||  ||||||||    
T  29774834 aaaattgtattttcataagccgttttttcataaactaccttaacaaactaatgaataatgcataaaagtttatttatttgcata 29774751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 11777066 - 11777000
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||||||||||||| | ||||||||||| ||| |||||||||| |||||| ||||||||||||||    
T  11777066 tatcttcataagctgtgttttcataaactaacttaacaagcttataaataatacataaaagcttatt 11777000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 755737 - 755810
Alignment:
Q  3 aaaaattatatcttcataagctgtttctt-cataaactaccttgacaagcttatgaataatgcataaaagctta 75  Q
    ||||||| |||||||||||||||||| || ||||||||||| | |||||||| |||||||| ||||||||||||    
T  755737 aaaaattgtatcttcataagctgtttttttcataaactaccgtaacaagcttctgaataatacataaaagctta 755810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 12223934 - 12223874
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaag 71  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| ||| ||||    
T  12223934 tatcttcataaactgttttttcataaactaccttgacaggcttatgaataatacatgaaag 12223874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 38216108 - 38216044
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataa 68  Q
    |||||| |||||||||| ||| ||| ||| ||||||||||||||||||||||||||||| |||||    
T  38216108 aaaattgtatcttcatatgctattttttcctaaactaccttgacaagcttatgaataatacataa 38216044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 4090578 - 4090495
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| ||||||| |||||||||| |||||  |||||||||||||| ||||||||||| ||| |||| |||||  ||||||||    
T  4090578 aaaattgtatcttcgtaagctgttttttcattgactaccttgacaagattatgaataatacatcaaagtttatttatttgcata 4090495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 33321418 - 33321471
Alignment:
Q  22 gctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagctta 75  Q
    ||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||    
T  33321418 gctgttttttcataaactaccttgacaagcttatgagtaatacataaaaactta 33321471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 34913401 - 34913470
Alignment:
Q  18 ataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||| ||||| ||||||||||| ||| |||| |||||||||||| ||||||||||||||  ||||||||    
T  34913401 ataagttgttttttcataaactatcttaacaaacttatgaataatacataaaagcttatttatttgcata 34913470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 42839326 - 42839390
Alignment:
Q  12 atcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||||||||||| || ||||||||||| |||||||| |||||||||||| ||||||| ||||||    
T  42839326 atcttcataagctggtt-ttcataaactaacttgacaaacttatgaataatacataaaaacttatt 42839390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 43787800 - 43787873
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| |||||||||||| ||||| ||||||| ||||||  ||||| ||||||||||| |||||||| |||||    
T  43787800 aaaattgtatcttcataagttgttttttcataagctacctaaacaagtttatgaataatacataaaagtttatt 43787873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 736054 - 735995
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    ||||||||||||||||||| || ||| ||||||||| ||||| |||||||||| ||||||    
T  736054 aaaaattatatcttcataaactattttttcataaaccaccttaacaagcttataaataat 735995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 5903623 - 5903564
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    ||||||| |||||||||||| ||||| ||||| |||||| ||||||||||||||| ||||    
T  5903623 aaaaattgtatcttcataagatgttttttcattaactactttgacaagcttatgagtaat 5903564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 12267087 - 12267028
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    ||||||||||||||||||| || ||| |||||||||||| | ||||||||||| ||||||    
T  12267087 aaaaattatatcttcataacctattttttcataaactacatcgacaagcttataaataat 12267028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 12683603 - 12683686
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||||||||| ||| |||| | |  ||||||||||||||||||| ||| ||| ||||||  ||||||||    
T  12683603 aaaattgtatcttcataagctgttttttcgtaaatttctctgacaagcttatgaataatacattaaaacttatttatttgcata 12683686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 11073015 - 11072961
Alignment:
Q  24 tgtttcttcataaactaccttgacaagcttatgaat-aatgcataaaagcttatt 77  Q
    ||||| |||||||||||||||||||||||||||||| ||| || |||||||||||    
T  11073015 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatt 11072961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 42064940 - 42064882
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    ||||| ||||||||||||| | ||| || |||||||||||| |||||||||||||||||    
T  42064940 aaaatgatatcttcataagttatttttttataaactaccttaacaagcttatgaataat 42064882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 4004908 - 4004825
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| || ||||||||| ||| | |||||||||||| || | ||||||||||||| | |||||||| |||||  ||||||||    
T  4004908 aaaattgtagcttcataagttgtattttcataaactactttaaaaagcttatgaatagtacataaaagattatttatttgcata 4004825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 16108118 - 16108177
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    ||||||| ||| |||||||| ||||| ||||||||||||||| |||| ||||| ||||||    
T  16108118 aaaaattgtatattcataagttgttttttcataaactaccttaacaaacttataaataat 16108177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 8832546 - 8832470
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatg---aataatgcataaaagcttatt 77  Q
    |||||| ||||||  ||| |||| | ||||||||||||||||| |||||||||   |||||| ||||||||||||||    
T  8832546 aaaattgtatctttctaacctgtgttttcataaactaccttgaaaagcttatgattaataatacataaaagcttatt 8832470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 12238501 - 12238563
Alignment:
Q  25 gtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||| ||||||||||||||| |||||||||| |||||| ||| || |||||||  ||||||||    
T  12238501 gttttttcataaactaccttaacaagcttataaataatacattaatgcttatttatttgcata 12238563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 13097998 - 13097936
Alignment:
Q  13 tcttcataagctgtttcttcataaactaccttgacaagcttatg-aataatgcataaaagctt 74  Q
    |||||||||| ||||| ||||||||| || |||||||||||||| |||||| ||| |||||||    
T  13097998 tcttcataagttgttttttcataaacaactttgacaagcttatgaaataatacatcaaagctt 13097936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 32366227 - 32366156
Alignment:
Q  15 ttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| |||||| ||||||||||||||| | || ||||| |||||| ||||||| ||||||  ||||||||    
T  32366227 ttcataaactgttttttcataaactaccttta-aaacttataaataatacataaaaacttatttatttgcata 32366156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 37409733 - 37409649
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| ||| |||||||  ||||| |||||||||||| ||||||| ||   ||||||| | ||||||||||||  ||||||||    
T  37409733 aaaaattgtattttcataaattgttttttcataaactacattgacaaactagagaataatacttaaaagcttatttatttgcata 37409649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 35168438 - 35168511
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35168438 aaaattgtatcttcataaactgttttttcataaactaccttgacaagcttatgaataatacataaaagcttatt 35168511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 34286561 - 34286633
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||    
T  34286561 aaaattgtatcttcataagctgttt-ttcacaaactaccttgacaagcttatgaataatacataaaagcttatt 34286633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 32975777 - 32975693
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| |||||||||||| ||| | |||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||    
T  32975777 aaaaattgtatcttcataagttgtgttttcataaactaccttgacaagcttatgaataatatataaaagcttatttatttgcata 32975693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 28879139 - 28879064
Alignment:
Q  12 atcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  28879139 atcttcataagttgttatttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcata 28879064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 32131529 - 32131446
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||| | ||||| |||||||||||||||||||| |||| ||||||||||||||||||||||  ||||||||    
T  32131529 aaaattgtatcttcataggttgtttattcataaactaccttgacaaacttaggaataatgcataaaagcttatttatttgcata 32131446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 10298922 - 10298978
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaat 59  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10298922 aaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaat 10298978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 35453488 - 35453416
Alignment:
Q  15 ttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||||||| ||||||||||||||||| || |||||||||||| ||||||||||||||  ||||||||    
T  35453488 ttcataagctgttttttcataaactaccttgataaacttatgaataatacataaaagcttatttatttgcata 35453416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 24350516 - 24350587
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagctta 75  Q
    ||||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||  |||||||||||    
T  24350516 aaaattatatcttcataagctattttttcataaattacgttgacaagcttatgaataatatataaaagctta 24350587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 9131125 - 9131197
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttat 76  Q
    |||||| ||||||||||||||||||||||| ||||||  | ||||||||||| |||||| |||||||||||||    
T  9131125 aaaattgtatcttcataagctgtttcttcagaaactaaatcgacaagcttataaataatacataaaagcttat 9131197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 16972353 - 16972427
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactacctt-gacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| |||||||||||||||||| ||||| ||||||||| ||||| |||||||||||| |||| |||||||||    
T  16972353 aaaattgtatcttcataagctgttttttcatgaactaccttagacaaacttatgaataatacatacaagcttatt 16972427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 13265551 - 13265490
Alignment:
Q  26 tttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||| |||||| |||||||||||||||||||| ||||||||||||||  ||||||||    
T  13265551 tttcttcatgaactactttgacaagcttatgaataatacataaaagcttatttatttgcata 13265490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 35286018 - 35285934
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| |||||||||||||  ||| |||||||||||| ||||| |||||||||||||  || |||||||||||  ||||||||    
T  35286018 aaaaattgtatcttcataagcatttttttcataaactactttgacgagcttatgaataacacacaaaagcttatttatttgcata 35285934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 32213045 - 32213102
Alignment:
Q  30 ttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||||| | ||||||||||||||||||| ||||||||||||||  ||||||||    
T  32213045 ttcataaactaacctgacaagcttatgaataatacataaaagcttatttatttgcata 32213102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 38895741 - 38895665
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||||  | ||| ||||||||||||||| |||||||||||||||||  ||||||| |||||  ||||||||    
T  38895741 tatcttcataaattattttttcataaactaccttaacaagcttatgaataataaataaaagtttatttttttgcata 38895665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 14709544 - 14709606
Alignment:
Q  15 ttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||  | | ||||||||||||    
T  14709544 ttcatgagctgttttttcataaactagcttgacaagcttatgaattgtacttaaaagcttatt 14709606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 14942514 - 14942440
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||||  |||||||||||  |||| ||||||||||| ||| |||||||||| |||||| || |||||||||||    
T  14942514 aaaaattgcatcttcataagtcgttttttcataaactaacttaacaagcttataaataatacacaaaagcttatt 14942440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 8216900 - 8216985
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactacctt-gacaagcttatgaataatgcat-aaaagcttattcctttgcata 87  Q
    |||||| ||||||||||| ||  || ||||||||||||||| |||||| ||||||||||| ||| |||||||||||  ||||||||    
T  8216900 aaaattgtatcttcataacctactttttcataaactaccttagacaagattatgaataatacataaaaagcttattaatttgcata 8216985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 13131529 - 13131436
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactacct---------tgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| ||| |||||||||||||| ||||||||||||||         |||||| |||||||||||| ||||||||||||||  ||||||||    
T  13131529 aaaaattgtattttcataagctgttttttcataaactacctaccttgacatgacaaacttatgaataatacataaaagcttatttatttgcata 13131436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 2669726 - 2669654
Alignment:
Q  15 ttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||| ||||| ||||||||||||||| |||| ||||| |||||| ||| | ||||||||  ||||||||    
T  2669726 ttcataagttgttttttcataaactaccttaacaaacttataaataatacattagagcttatttatttgcata 2669654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 8752888 - 8752812
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| |||||||||| |||||||| ||| ||||||  | || ||||||| || ||||||||||| |||||||||    
T  8752888 tatcttcttaagctgttttttcataaattactttgacacacctacgaataatacacaaaagcttatttctttgcata 8752812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 19327956 - 19327873
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| |||||| |||| |||||| | |||||||||| || |||| |||||||||||| |||||||| |||||  ||||||||    
T  19327956 aaaaattgtatctttataaactgtttttccataaactacatt-acaaacttatgaataatacataaaagtttatttatttgcata 19327873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 25333729 - 25333776
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagct 52  Q
    |||||| |||||||||||| ||||| |||||||||||||||||||||||    
T  25333729 aaaattgtatcttcataagttgttt-ttcataaactaccttgacaagct 25333776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 42363313 - 42363396
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| ||||||||||| | |||| ||||||||||||||| | || ||||| |||||| ||||||| ||||||  ||||||||    
T  42363313 aaaaattgtatcttcataaacggttttttcataaactacctt-aaaaacttataaataatacataaaaacttatttatttgcata 42363396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 24866948 - 24867011
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcata 67  Q
    |||||| || ||||||||||||||| |||||||||||| || |||| ||||| |||||| ||||    
T  24866948 aaaattgtaccttcataagctgttttttcataaactacattaacaatcttataaataatacata 24867011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 1089081 - 1089019
Alignment:
Q  25 gtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||| |||||||| ||| |||||||||||||||||||| ||| ||| ||||||  ||||||||    
T  1089081 gttttttcataaagtacattgacaagcttatgaataatacattaaaacttatttatttgcata 1089019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 12607167 - 12607086
Alignment:
Q  5 aaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||| ||||||||||| | |||| ||||||||||||||| | || ||||| |||||| ||||||| ||||||  ||||||||    
T  12607167 aaattgtatcttcataaaccgttttttcataaactacctt-aaaaacttataaataatacataaaaacttatttatttgcata 12607086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 25465843 - 25465891
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagct 52  Q
    ||||||| |||||||||||| ||||| |||||||||| ||||||||||||    
T  25465843 aaaaattgtatcttcataagttgttt-ttcataaacttccttgacaagct 25465891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 32924209 - 32924266
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataa 61  Q
    |||||| |||||||||||| ||||| |||||||||||| |  |||||||||| |||||    
T  32924209 aaaattttatcttcataagttgttttttcataaactacataaacaagcttataaataa 32924266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 24087233 - 24087189
Alignment:
Q  30 ttcataaactaccttgacaagcttatgaataatgcataaaagctt 74  Q
    ||||||||||| || ||||||||||||||||||  ||||||||||    
T  24087233 ttcataaactatctcgacaagcttatgaataatatataaaagctt 24087189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 28074453 - 28074371
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  28074453 aaaattgtatcttcataagcttttt-ttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcata 28074371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 29877729 - 29877645
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| ||||||||||||||| || |||||||||||||||  |||||||||||||||| ||||||||||||||  ||||||||    
T  29877729 aaaaattgtatcttcataagctgctttttcataaactaccttagcaagcttatgaataatacataaaagcttatttatttgcata 29877645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 7148861 - 7148778
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| ||| || ||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  7148861 aaaattgtatttttataagctgttttttcaaaaactaccttgacaagcttatgaataatacataaaagcttatttatttgcata 7148778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 48591421 - 48591504
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||  |||||| ||||||  ||||||||    
T  48591421 aaaattgtatcttcataagctgttttttcataaactaccttgacaagcgtatgaataatatataaaaacttatttatttgcata 48591504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 17222918 - 17222852
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaa 70  Q
    |||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||    
T  17222918 aaaattgtatcttcataatctgttttttcataaactaccttgacaagcttatgaataatacataaaa 17222852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 23297525 - 23297444
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| |||||||||||||||||||   ||||||||||||||||| |||||||||||| ||||||||||||||  ||||||||    
T  23297525 aaaaattgtatcttcataagctgtttc---ataaactaccttgacaaacttatgaataatacataaaagcttatttatttgcata 23297444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 35124469 - 35124404
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttat 76  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||| ||||    
T  35124469 tatcttcataagctgttttttcataaactaccttgacaagcttatgaatagtacataaaaggttat 35124404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 46704267 - 46704340
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| |||||||||||||||||| ||||||||||||||| ||||||| |||||||||  |||||||||||||    
T  46704267 aaaattttatcttcataagctgttttttcataaactaccttaacaagctcatgaataataaataaaagcttatt 46704340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 23335731 - 23335648
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||||||||| ||||||||||||||||| | ||||||||||||| ||||||| || |||  ||||||||    
T  23335731 aaaattgtatcttcataagctgttttttcataaactaccttgatatgcttatgaataatacataaaatctcatttatttgcata 23335648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 52274117 - 52274200
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||||||||| ||| ||||||||||||| |||||||| |||||| |||||||| |||||  ||||||||    
T  52274117 aaaattgtatcttcataagctgttttttcgtaaactaccttgataagcttatcaataatacataaaagtttatttatttgcata 52274200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 1374359 - 1374443
Alignment:
Q  4 aaaattatatcttcataagctg-tttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| ||||||||||||||| ||| ||||||||||||| |||||||||||||||| |||||||||| ||| ||  ||||||||    
T  1374359 aaaattgtatcttcataagctggttttttcataaactaccatgacaagcttatgaatcatgcataaaaacttttttatttgcata 1374443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 43699478 - 43699553
Alignment:
Q  4 aaaattatatcttcataag--ctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| ||||||||||||  |||||| |||||||||||| |||||||||||||||||||  ||||||||||||||    
T  43699478 aaaattgtatcttcataagagctgttttttcataaactacattgacaagcttatgaataagacataaaagcttatt 43699553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 948163 - 948088
Alignment:
Q  3 aaaaattatatcttcataagctgtttctt-cataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||||| |||||| ||||||||||| || ||||||||||||||||||  ||||||||||| ||||||||||||||    
T  948163 aaaaattgtatctttataagctgtttttttcataaactaccttgacaaagttatgaataatacataaaagcttatt 948088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 12495648 - 12495726
Alignment:
Q  11 tatcttcataagctgtttcttcataaactacctt--gacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| || |||||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||  ||||||||    
T  12495648 tatcttgattagctgttttttcataaactaccttttgacaagcttatgaataatacataaaagcttatttatttgcata 12495726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 212950 - 213027
Alignment:
Q  9 tatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||  |||||| ||||||  ||||||||    
T  212950 tatatcttcataagttgttttttcataaactaccttaacaagcttatgaataataaataaaa-cttatttatttgcata 213027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 8130560 - 8130494
Alignment:
Q  21 agctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||| ||||||| ||||| |||||| |||||||||||||||||||||||||||  ||||||||    
T  8130560 agctgtttgttcataagctaccctgacaaacttatgaataatgcataaaagcttatttatttgcata 8130494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 18424274 - 18424347
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||||| |||||||||||  ||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||    
T  18424274 aaaaattgtatcttcataaattgttt-ttcataaactaccttcacaagtttatgaataatacataaaagcttatt 18424347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 38345818 - 38345891
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||||| |||||||||||| ||||| |||||||||||| ||||||| |||||||||| | ||||||||||||||    
T  38345818 aaaaattgtatcttcataagttgttttttcataaactactttgacaa-cttatgaatactacataaaagcttatt 38345891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 32628867 - 32628794
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| |||||||| ||||||||| |||||||| ||||| |||||||||||||||||  || |||||||||||    
T  32628867 aaaattgtatcttcacaagctgttttttcataaattacctcgacaagcttatgaataacacaaaaaagcttatt 32628794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 41228992 - 41228919
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| ||||||||| || ||||| ||||||||||||||| |||||||||||||||||  |||||||| ||||    
T  41228992 aaaattgtatcttcatcagttgttttttcataaactaccttaacaagcttatgaataataaataaaagcctatt 41228919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 488380 - 488452
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagctta 75  Q
    ||||||| |||||| | ||||  ||| |||||||||||||||||||||||||| |||||| ||||||||||||    
T  488380 aaaaattgtatctttacaagcaattttttcataaactaccttgacaagcttattaataatacataaaagctta 488452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 7206590 - 7206666
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||||| ||||| ||||||||||||||| ||| |||  ||||||||  |||||||||||||| ||||||||    
T  7206590 tatcttcataagttgttttttcataaactaccttaacaggctcgtgaataataaataaaagcttattcatttgcata 7206666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 28663662 - 28663606
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaata 60  Q
    |||||| |||||||| || |||||| |||||||||||||||||||||||||||||||    
T  28663662 aaaattgtatcttcagaatctgttttttcataaactaccttgacaagcttatgaata 28663606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 897039 - 896976
Alignment:
Q  24 tgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||| |||||||||||| |||||||||||||||||||| |||||||| |||||  ||||||||    
T  897039 tgttttttcataaactacattgacaagcttatgaataatacataaaagtttatttatttgcata 896976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 36740993 - 36740910
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| ||||||||| | |||| | |||||||||||| |||||||||||||| |||||  |||||||||||||  ||||||||    
T  36740993 aaaattgtatcttcatgaactgtattttcataaactactttgacaagcttatgcataatatataaaagcttatttatttgcata 36740910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 18630899 - 18630961
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagct 73  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||| |||||  |||||||||    
T  18630899 tatcttcataagctgttttttcataaactaccttaacaagctcatggataataaataaaagct 18630961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 21216325 - 21216391
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaa 70  Q
    |||||| || |||||||| ||  || ||||||||||||||||||||||||||||||||| |||||||    
T  21216325 aaaattgtagcttcataacctactttttcataaactaccttgacaagcttatgaataatacataaaa 21216391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 36255033 - 36255087
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaa 58  Q
    |||||| |||||||||||||||||| |||| ||||||| ||||||||||||||||    
T  36255033 aaaattgtatcttcataagctgttttttcacaaactacgttgacaagcttatgaa 36255087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 2405277 - 2405205
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttat 76  Q
    ||||||| ||||| |||||||| ||| |||||||||||| ||||||||||||| |||||| ||||| |||||||    
T  2405277 aaaaattgtatctacataagctattttttcataaactacattgacaagcttat-aataatacataatagcttat 2405205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 27368151 - 27368232
Alignment:
Q  6 aattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||| |||||| |||| |||||| ||||||| |||| ||||||| ||||||||||||  |||||||||||||  ||||||||    
T  27368151 aattgtatctttataaactgttttttcataagctacattgacaaacttatgaataatatataaaagcttatttatttgcata 27368232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 42611872 - 42611948
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcata-aaagcttattcctttgcata 87  Q
    |||||||||||| ||||| ||||||||||| || |||||||||||||||||| |||| ||||||||||  ||||||||    
T  42611872 tatcttcataagttgttttttcataaacta-ctcgacaagcttatgaataatacatataaagcttatttatttgcata 42611948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 825764 - 825688
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||| |||||||| ||||||||||| || |||| |||||||||||||  | |||||||||||  ||||||||    
T  825764 tatcttcatgagctgttttttcataaactaactagacaggcttatgaataatatagaaaagcttatttatttgcata 825688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 19725382 - 19725316
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaa 70  Q
    |||||||||||||||||  |||||| |||||||| |||||| |||| ||||| |||||| |||||||    
T  19725382 aaaattatatcttcatagactgttttttcataaaataccttaacaaacttataaataatacataaaa 19725316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 39932752 - 39932834
Alignment:
Q  5 aaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||| |||||||||||  ||||| |||||| |||||||| |||| ||||| |||||| |||||||| |||||  ||||||||    
T  39932752 aaattgtatcttcataaattgttttttcatacactaccttaacaatcttataaataatacataaaagtttatttatttgcata 39932834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 2494404 - 2494469
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttat 76  Q
    ||||||||||| || ||| ||||||||||||||| |||||||||| ||||||   |||||||||||    
T  2494404 tatcttcataaactattttttcataaactacctttacaagcttataaataatatgtaaaagcttat 2494469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 35405773 - 35405708
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaa 69  Q
    |||||| |||||||||||||||||| ||||||||||  ||||||||| ||| | ||||| ||||||    
T  35405773 aaaattctatcttcataagctgttttttcataaactgtcttgacaagattaagtataatacataaa 35405708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 4331405 - 4331353
Alignment:
Q  25 gtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||| ||||||||||||||||||||  |||||||||||  |||||||||||||    
T  4331405 gttttttcataaactaccttgacaaagttatgaataataaataaaagcttatt 4331353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 8601291 - 8601207
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| ||||||||||| | |||| |||||||||||| |||||| |||||| ||||||  | ||||||| |||  ||||||||    
T  8601291 aaaaattgtatcttcataaccagttttttcataaactacattgacaggcttataaataatagaaaaaagctcatttatttgcata 8601207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 22273870 - 22273830
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactacct 43  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  22273870 aaaaattgtatcttcataagctgttttttcataaactacct 22273830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 55638085 - 55638161
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||| |||||| |||||||||||  || |||| |||||||||||| ||||||||||| ||  ||||||||    
T  55638085 tatctttataaactgttttttcataaactatatttacaaacttatgaataatacataaaagcttgtttatttgcata 55638161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 3564283 - 3564236
Alignment:
Q  30 ttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||||||||||||||||| ||||||||||||  ||||||| |||||    
T  3564283 ttcataaactaccttgacaaacttatgaataatatataaaagtttatt 3564236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 4603329 - 4603411
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| ||||||||||| |||||| ||||||||||||||| | ||  |||| |||||| ||||||| ||||||  ||||||||    
T  4603329 aaaattgtatcttcataaactgttttttcataaactacctt-aaaaaattataaataatacataaaaacttatttatttgcata 4603411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 8057092 - 8057167
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcat 86  Q
    |||||||||||   |||| ||| ||| |||||||||||||||||||||||||  |||||| ||||||  |||||||    
T  8057092 tatcttcataaatcgttttttcttaagctaccttgacaagcttatgaataataaataaaaacttatttttttgcat 8057167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 29997333 - 29997375
Alignment:
Q  30 ttcataaactaccttgacaagcttatgaataatgcataaaagc 72  Q
    ||||||||||||||||| |||||||||||||||  ||||||||    
T  29997333 ttcataaactaccttgataagcttatgaataatatataaaagc 29997375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 43415289 - 43415359
Alignment:
Q  7 attatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||||||| ||||  ||||| ||| |||||||| || |||| |||||||||||| ||||||| ||||||    
T  43415289 attatatcttgataaattgttttttcgtaaactacattaacaaccttatgaataatacataaaaacttatt 43415359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 45018615 - 45018549
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||||||||| ||||| |||||||||||| || |||| || |||||||||  |||||| ||||||    
T  45018615 tatcttcataagttgttttttcataaactactttaacaatctcatgaataataaataaaatcttatt 45018549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 48687014 - 48686965
Alignment:
Q  28 tcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||| ||||||||| |||||||||||||||||| | ||||||| ||||||    
T  48687014 tctttataaactacgttgacaagcttatgaatagtacataaaaacttatt 48686965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 33533999 - 33533959
Alignment:
Q  22 gctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    ||||||| |||||||||||||||||| | ||||||||||||    
T  33533999 gctgttttttcataaactaccttgactaacttatgaataat 33533959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 40699425 - 40699393
Alignment:
Q  24 tgtttcttcataaactaccttgacaagcttatg 56  Q
    ||||| |||||||||||||||||||||||||||    
T  40699425 tgttttttcataaactaccttgacaagcttatg 40699393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 43740071 - 43740130
Alignment:
Q  2 gaaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    |||||||| ||||||||||| |||||| |||||||| ||| | |||||| |||||||||||    
T  43740071 gaaaaattgtatcttcataaactgttt-ttcataaattacttagacaagtttatgaataat 43740130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 7e-21; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 29378734 - 29378651
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| || || |||||| ||||||||||||||  ||||||||    
T  29378734 aaaattgtatcttcataagctgttttttcataaactaccttgacaaactcataaataatacataaaagcttatttatttgcata 29378651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 30181632 - 30181569
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagctt 74  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||    
T  30181632 tatcttcataagctgttttttgataaactaccttgacaagcttatgaataatacataaaagctt 30181569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 47511132 - 47511049
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||||||||| |||||| ||| |||| ||||||||||||||||| ||||||||||||||  ||||||||    
T  47511132 aaaattgtatcttcataagctgttttttcatagacttccttaacaagcttatgaataatacataaaagcttatttatttgcata 47511049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 44613469 - 44613553
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| |||| ||||||| ||||| ||||||||||||||| |||||||||||||||||  |||||||||||||  ||||||||    
T  44613469 aaaaattgtatcgtcataagttgttttttcataaactaccttaacaagcttatgaataataaataaaagcttatttatttgcata 44613553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 6406877 - 6406939
Alignment:
Q  12 atcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagctt 74  Q
    ||||||||||||||||| |||||||||||||||||||||| |  |||||||||||||||||||    
T  6406877 atcttcataagctgttttttcataaactaccttgacaagccttagaataatgcataaaagctt 6406939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 14691296 - 14691366
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagctt 74  Q
    ||||||||||||||||||  ||||| |||||||| ||| |||||||||||||||||||| |||||||||||    
T  14691296 aaaattatatcttcataaattgttttttcataaattacattgacaagcttatgaataatacataaaagctt 14691366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 29390548 - 29390630
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||||| ||| |||| |||||  ||||||||    
T  29390548 aaaattgtatcttcataagttgttt-ttcataaactacctttacaagcttatgaataatacatcaaagattatttatttgcata 29390630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 20888663 - 20888579
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcat-aaaagcttattcctttgcata 87  Q
    |||||| |||||||||||  ||||| |||||||||||||||  |||||||||||||||| ||| |||||||||||  ||||||||    
T  20888663 aaaattgtatcttcataaattgttttttcataaactacctttgcaagcttatgaataatacataaaaagcttatttatttgcata 20888579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 14536972 - 14536905
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaa 70  Q
    ||||| |||||||||||||  ||||| ||||||||||| |||||||| |||||||||||| |||||||    
T  14536972 aaaaaatatatcttcataaagtgttttttcataaactatcttgacaatcttatgaataatacataaaa 14536905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 34923015 - 34922937
Alignment:
Q  11 tatcttcataagctgtttcttc--ataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||| ||||||||| ||   ||||||||||||||||| |||||||||||| ||||||||||||||  ||||||||    
T  34923015 tatcttcacaagctgtttttttttataaactaccttgacaaacttatgaataatacataaaagcttatttatttgcata 34922937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 40629438 - 40629479
Alignment:
Q  28 tcttcataaactaccttgacaagcttatgaataatgcataaa 69  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  40629438 tcttcataaactaccttgacaagcttatgaataatacataaa 40629479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 41094305 - 41094224
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||| | |||  |||||||| |||||||||||||||||| |||| |||||| |||||||  ||||||||    
T  41094305 aaaattgtatcttcataagtttttt--tcataaaccaccttgacaagcttatgagtaatacataaaggcttatttatttgcata 41094224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 32917588 - 32917671
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcat 86  Q
    |||||||||||||||||||| ||||| ||| ||||| ||  ||| |||||||||||| || ||||||| ||||||  |||||||    
T  32917588 aaaaattatatcttcataagttgttttttcgtaaaccactatgataagcttatgaatgatacataaaaacttatttatttgcat 32917671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 38372647 - 38372564
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| | ||||| | ||||| || ||| |||||||||||||||| |||||||||||| ||||| ||||||||  ||||||||    
T  38372647 aaaattgtttcttcttgagctgctttttcgtaaactaccttgacaaacttatgaataatacataagagcttatttatttgcata 38372564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 43391811 - 43391752
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    |||||||||||||||||||  | ||| ||||||||||||||| |||| ||||||||||||    
T  43391811 aaaaattatatcttcataaattattttttcataaactaccttaacaaacttatgaataat 43391752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 39279518 - 39279460
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    |||||| ||||||| ||||||| || ||||||||| ||||| |||||||||||||||||    
T  39279518 aaaattgtatcttcctaagctgatttttcataaaccaccttaacaagcttatgaataat 39279460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 17944735 - 17944686
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaata 60  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||    
T  17944735 tatcttcataagttgtttttctataaactaccttgacaagcttatgaata 17944686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 7098118 - 7098170
Alignment:
Q  25 gtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||| ||||||||||| |||||||| |||||||||||| ||||||| ||||||    
T  7098118 gttttttcataaactatcttgacaaacttatgaataattcataaaatcttatt 7098170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 41037814 - 41037759
Alignment:
Q  31 tcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||||||  ||||||||    
T  41037814 tcataaattaccttgacaagctt-tgaataatacataaaagcttatttatttgcata 41037759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 41677464 - 41677380
Alignment:
Q  4 aaaattatatcttcataagctg-tttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| ||||||||||| ||| ||| || ||||||||| ||||||| |||||||||||| |||||||  |||||  ||||||||    
T  41677464 aaaattgtatcttcataatctggttttttaataaactacattgacaaacttatgaataatacataaaaatttatttatttgcata 41677380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 16012787 - 16012736
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttat 55  Q
    |||||| |||||||| |||| |||| |||||||||||| |||||||||||||    
T  16012787 aaaattgtatcttcagaagcagttttttcataaactactttgacaagcttat 16012736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 18855267 - 18855318
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttat 55  Q
    |||||||||||||||||| || ||| | |||||||||| |||||||||||||    
T  18855267 aaaattatatcttcataatctatttttccataaactacattgacaagcttat 18855318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 22575675 - 22575592
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| ||||||||||| |||||| |||||||| || ||| |||| ||||| |||||| ||||||| | ||||  ||||||||    
T  22575675 aaaattgtatcttcataaactgttttttcataaaatatcttaacaaacttataaataatacataaaaacgtatttatttgcata 22575592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 35809179 - 35809096
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| ||| ||| |||| ||||| |||||||||||| || |||||||||| |||||| ||| || |||||||  ||||||||    
T  35809179 aaaattgtatattcttaagttgttttttcataaactacgttaacaagcttataaataatacattaatgcttatttatttgcata 35809096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 48021645 - 48021727
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| ||||||||| || | ||| |||||||||||| || |||||||||||||||||  |||| ||||||||  ||||||||    
T  48021645 aaaattgtatcttcattagttattt-ttcataaactactttaacaagcttatgaataataaataagagcttatttatttgcata 48021727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 31613671 - 31613725
Alignment:
Q  13 tcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcata 67  Q
    |||||||| | ||||| |||||||||||| |||||||||| ||||||||| ||||    
T  31613671 tcttcataggttgttttttcataaactacattgacaagctaatgaataatacata 31613725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 37779290 - 37779335
Alignment:
Q  15 ttcataagctgtttctt--cataaactaccttgacaagcttatgaa 58  Q
    |||||||||||||| ||  |||||||||||||||||||||||||||    
T  37779290 ttcataagctgttttttttcataaactaccttgacaagcttatgaa 37779335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 14675957 - 14676021
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaa 69  Q
    |||||| ||||||||||| |||||| ||||||||||||||| | || ||||| |||||| ||||||    
T  14675957 aaaattgtatcttcataaactgttttttcataaactacctt-aaaaacttataaataatacataaa 14676021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 33288134 - 33288179
Alignment:
Q  42 cttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||||| ||||||||| ||||||||||||||  ||||||||    
T  33288134 cttgacaagctaatgaataatacataaaagcttatttatttgcata 33288179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 48949806 - 48949769
Alignment:
Q  7 attatatcttcataagctgtttcttcataaactacctt 44  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  48949806 attatatcttcataaactgttttttcataaactacctt 48949769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 23119916 - 23120000
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| |||||||| || |||||  ||| |||||||| ||||||| |||||||||||| | | |||| |||||  ||||||||    
T  23119916 aaaaattgtatcttcacaaactgttatttcttaaactacattgacaaacttatgaataatactttaaagattatttatttgcata 23120000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 7e-21; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 7267864 - 7267781
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| || ||||||||| ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||  ||||||||    
T  7267864 aaaattgtaccttcataagttgttttttcataaactaccttggcaagcttatgaataatacataaaagcttatttgtttgcata 7267781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 8014877 - 8014806
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagctta 75  Q
    |||||| |||||||||| || |||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  8014877 aaaattgtatcttcatatgcagttttttcataaactaccttgacaagcttatgaataatgaataaaagctta 8014806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 2027180 - 2027256
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||||||||||| ||||||||||  |||||||| ||| |||||||||||||||||||||||  ||||||||    
T  2027180 tatcttcataagctgttttttcataaactgtcttgacaaacttctgaataatgcataaaagcttatttatttgcata 2027256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 2255824 - 2255740
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||| || |||||||||| |||  ||||||||    
T  2255824 aaaaattgtatcttcataagctgttttttcataaattaccttaacaagcttatgaatcatacataaaagctcatttatttgcata 2255740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 21025231 - 21025307
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||| ||| ||| ||||||||||||||| ||||||||||| ||||| ||||||||||||||  ||||||||    
T  21025231 tatcttcataggctcttttttcataaactaccttaacaagcttatgcataatacataaaagcttatttatttgcata 21025307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 24625933 - 24625857
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||||||||  || ||||||||||||||| ||||||||||||||||| ||||||||| ||||  ||||||||    
T  24625933 tatcttcataagctaatttttcataaactaccttaacaagcttatgaataatacataaaagcgtatttatttgcata 24625857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 2034226 - 2034309
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| ||||||  |||| ||||| |||||||||||||||||||| ||||| |||||| ||||||||||||||  ||||||||    
T  2034226 aaaattgtatcttggtaagttgttttttcataaactaccttgacaaacttataaataatacataaaagcttatttatttgcata 2034309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 10874073 - 10874002
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| ||||||||||||||||||  |||||||||||||| |||||||||| ||||||  |||||||||||||    
T  10874073 aaaattgtatcttcataagctgttttctcataaactaccttaacaagcttattaataat--ataaaagcttatt 10874002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 25430762 - 25430819
Alignment:
Q  4 aaaattatatcttcataagctgtttctt-cataaactaccttgacaagcttatgaata 60  Q
    |||||| |||||||||||||||||| || |||||||||||||||||||||||||||||    
T  25430762 aaaattgtatcttcataagctgtttttttcataaactaccttgacaagcttatgaata 25430819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 3210993 - 3211081
Alignment:
Q  4 aaaattatatcttcataagctgttt-----cttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| ||||||||||||||||||     ||||||||||||| ||||||||||||| | |||| ||||||||||||||  ||||||||    
T  3210993 aaaattgtatcttcataagctgttttttttcttcataaactacattgacaagcttatcagtaatacataaaagcttatttatttgcata 3211081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 10755288 - 10755360
Alignment:
Q  15 ttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||| ||| |||||||  |||||||||||||||||||||||| | ||||||||||||  ||||||||    
T  10755288 ttcataagctattttttcataagttaccttgacaagcttatgaataatacgtaaaagcttatttatttgcata 10755360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 1240614 - 1240681
Alignment:
Q  11 tatcttcataagctgtttctt-cataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||||||||| ||||| || | |||| |||||||||||||||||||||||| ||||||||||||||    
T  1240614 tatcttcataagttgtttttttcgtaaattaccttgacaagcttatgaataatacataaaagcttatt 1240681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 21891335 - 21891418
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||| ||||  |||||||||||| ||||||||||||||||||||  || ||| ||||||  ||||||||    
T  21891335 aaaattctatcttcataagttgttatttcataaactacattgacaagcttatgaataatatatcaaaacttatttatttgcata 21891418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 13429544 - 13429488
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaata 60  Q
    |||||| |||| |||||| |||||| |||||||||||| ||||||||||||||||||    
T  13429544 aaaattgtatcctcataaactgttttttcataaactactttgacaagcttatgaata 13429488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 34509999 - 34509931
Alignment:
Q  6 aattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagctt 74  Q
    |||||||||||||||| || |||  ||||||||| | ||||||| |||||||||||| |||||||||||    
T  34509999 aattatatcttcataaactcttttatcataaactccattgacaaacttatgaataatacataaaagctt 34509931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 9202395 - 9202483
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttga----caagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| |||||||||| ||||||| |||||||||| ||||||    |||||||||| ||||| |  |||||||||||| ||||||||    
T  9202395 aaaaattgtatcttcatatgctgttttttcataaactgccttgagttacaagcttatgtataatacggaaaagcttattcatttgcata 9202483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 32675886 - 32675969
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||| | ||| ||||||||| |||||   |||||||||||||||  |||||||||||||  ||||||||    
T  32675886 aaaattgtatcttcataagttattttttcataaacaaccttacgaagcttatgaataataaataaaagcttatttatttgcata 32675969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 16589840 - 16589774
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaa 70  Q
    ||||| ||||||||||||  ||||| |||||||||| | ||||||| |||||||||||| |||||||    
T  16589840 aaaatcatatcttcataaattgttttttcataaactcctttgacaaacttatgaataatacataaaa 16589774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 16605540 - 16605606
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaa 70  Q
    ||||| ||||||||||||  ||||| |||||||||| | ||||||| |||||||||||| |||||||    
T  16605540 aaaatcatatcttcataaattgttttttcataaactcctttgacaaacttatgaataatacataaaa 16605606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 6632738 - 6632665
Alignment:
Q  14 cttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||| ||||| |||||||||||| || ||||| |||| |||||| ||||||||| ||||  ||||||||    
T  6632738 cttcataagttgttttttcataaactacattaacaagtttataaataatacataaaagcatatttatttgcata 6632665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 10054444 - 10054387
Alignment:
Q  30 ttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||||| || |||| |||||||||||| ||||||||||||||  ||||||||    
T  10054444 ttcataaactacatttacaaacttatgaataatacataaaagcttatttatttgcata 10054387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 21610046 - 21610111
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaa 69  Q
    |||||||||| ||||||| || ||| |||||||||||| || |||||||||| |||||| ||||||    
T  21610046 aaaattatatattcataaactattttttcataaactacattaacaagcttataaataattcataaa 21610111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 30534043 - 30533986
Alignment:
Q  30 ttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||||| || |||| |||||||||||| ||||||||||||||  ||||||||    
T  30534043 ttcataaactacatttacaaacttatgaataatacataaaagcttatttatttgcata 30533986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 6776890 - 6776814
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||||| | ||| | ||||||||||||| ||||||||||| ||| |  |||||||||||||  ||||||||    
T  6776890 tatcttcataagttatttttccataaactaccttaacaagcttatggatattaaataaaagcttatttatttgcata 6776814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 6958713 - 6958649
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataa 68  Q
    |||||| |||||||| |||||| || |||| |||||||||||| |||||||||||| || |||||    
T  6958713 aaaattgtatcttcacaagctgctttttcacaaactaccttgagaagcttatgaatgatacataa 6958649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 12817116 - 12817172
Alignment:
Q  31 tcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||||| ||||| |||||||||||||| ||| ||||||||||  ||||||||    
T  12817116 tcataaactacattgactagcttatgaataatacattaaagcttatttatttgcata 12817172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 2040205 - 2040256
Alignment:
Q  26 tttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||||||||| |||||| |||| ||||||||||||  |||||||||||||    
T  2040205 tttcttcataaattaccttaacaaacttatgaataataaataaaagcttatt 2040256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 18078242 - 18078297
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaa 58  Q
    |||||||||||||| |||| |||||| |||||||| ||| ||||||| ||||||||    
T  18078242 aaaaattatatctttataaactgttttttcataaaatacattgacaaacttatgaa 18078297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 7446858 - 7446932
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    ||||||| |||||||||||| ||||  || |||||| ||||| ||| |||||||||| || ||| ||||||||||    
T  7446858 aaaaattgtatcttcataagttgttgttttataaacaaccttaacaggcttatgaatgatacattaaagcttatt 7446932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 7576858 - 7576916
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 62  Q
    |||||||||||||||||| |||||| || ||||| ||  || |||||||||||||||||    
T  7576858 aaaattatatcttcataaactgtttttttataaattatgttaacaagcttatgaataat 7576916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 6758690 - 6758633
Alignment:
Q  30 ttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||||||||| ||||||||||| |||||  | |||||||||||  ||||||||    
T  6758690 ttcataaactaccttaacaagcttatggataataaacaaaagcttatttatttgcata 6758633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 3829915 - 3829999
Alignment:
Q  3 aaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||| |||||||||||| ||||| ||||||||||||| | | ||  ||||||||||   |||||||| ||||  ||||||||    
T  3829915 aaaaattttatcttcataagttgttttttcataaactaccataaaaactttatgaataacaaataaaagcgtatttatttgcata 3829999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 24829 - 24751
Alignment:
Q  11 tatcttcataagctgtttcttcataaactacctt--gacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| || |||||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||  ||||||||    
T  24829 tatcttgattagctgttttttcataaactaccttttgacaagcttatgaataatacataaaagcttatttatttgcata 24751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 97215 - 97286
Alignment:
Q  16 tcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||||||| |||||||||||||||||| |||||||||||| | ||||| ||||||||  ||||||||    
T  97215 tcataagctgttttttcataaactaccttgactagcttatgaatactacataatagcttatttatttgcata 97286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 24386 - 24455
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagct 73  Q
    |||||||||||||| |||| ||||  || || ||||||||||||||||||||||||||| |||| |||||    
T  24386 aaaattatatcttcgtaagttgttattttatcaactaccttgacaagcttatgaataatacatacaagct 24455  T

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Target: scaffold0057; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 43842 - 43896
Alignment:
Q  33 ataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    ||||||||||| ||||||||| |||||||| ||||||| ||||||  ||||||||    
T  43842 ataaactacctcgacaagcttttgaataatacataaaaacttatttatttgcata 43896  T

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Target: scaffold0041 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 108991 - 109072
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| |||||||||||| | |||  |||||||| |||||||||||||||||| |||| |||||| |||||||  ||||||||    
T  108991 aaaattgtatcttcataagtttttt--tcataaaccaccttgacaagcttatgagtaatacataaaggcttatttatttgcata 109072  T

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Target: scaffold0512 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 4141 - 4081
Alignment:
Q  17 cataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||||| ||| ||||||||||| ||| |||||||||| |||||| ||| ||||||||||    
T  4141 cataagctattttttcataaactatctttacaagcttataaataatacattaaagcttatt 4081  T

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Target: scaffold0332 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 14743 - 14816
Alignment:
Q  4 aaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 77  Q
    |||||| ||| || |||| ||| || |||||||||||| || | || |||||||||||| ||||||||||||||    
T  14743 aaaattgtatatttataaactgatttttcataaactacatttaaaaacttatgaataatacataaaagcttatt 14816  T

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Target: scaffold1367 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 1140 - 1064
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||||| | ||| | |||||| |||||| |||| |||||| |||||  |||||||||||||  ||||||||    
T  1140 tatcttcataagttatttttccataaattaccttaacaatcttatggataataaataaaagcttatttatttgcata 1064  T

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Target: scaffold0299 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 11304 - 11380
Alignment:
Q  11 tatcttcataagctgtttcttcataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||||||||| | ||| | |||||| |||||| ||||||| ||| |||||  |||||||||||||  ||||||||    
T  11304 tatcttcataagttatttttccataaattaccttaacaagctaatggataataaataaaagcttatttatttgcata 11380  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 178590 - 178506
Alignment:
Q  4 aaaattatatcttcataagctgtttctt-cataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcata 87  Q
    |||||| ||||||||||| || ||| || |||||| |||||| | || ||||| |||||| ||||||||||||||  ||||||||    
T  178590 aaaattgtatcttcataaactatttttttcataaaataccttaagaaacttataaataatacataaaagcttatttatttgcata 178506  T

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