View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1305_high_2 (Length: 729)

Name: NF1305_high_2
Description: NF1305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1305_high_2
NF1305_high_2
[»] chr6 (21 HSPs)
chr6 (6-133)||(23027233-23027360)
chr6 (6-132)||(16381891-16382017)
chr6 (6-132)||(15077884-15078010)
chr6 (6-129)||(21927842-21927965)
chr6 (6-132)||(1648332-1648458)
chr6 (6-132)||(14624875-14625001)
chr6 (6-132)||(16233665-16233791)
chr6 (6-132)||(16098687-16098813)
chr6 (6-132)||(23996885-23997011)
chr6 (8-132)||(18572290-18572414)
chr6 (8-132)||(18837426-18837550)
chr6 (11-131)||(19865329-19865449)
chr6 (11-117)||(27566513-27566619)
chr6 (77-119)||(16962976-16963018)
chr6 (77-131)||(22078209-22078263)
chr6 (77-129)||(27330954-27331006)
chr6 (77-129)||(27391694-27391746)
chr6 (77-131)||(5838738-5838792)
chr6 (80-130)||(15460047-15460097)
chr6 (77-119)||(18407473-18407515)
chr6 (77-131)||(20636820-20636874)
[»] chr2 (18 HSPs)
chr2 (6-133)||(23816955-23817082)
chr2 (6-132)||(24831100-24831226)
chr2 (6-133)||(25129051-25129178)
chr2 (6-132)||(24569581-24569707)
chr2 (9-132)||(12640146-12640269)
chr2 (6-132)||(22276682-22276808)
chr2 (16-133)||(22761481-22761598)
chr2 (6-129)||(21906085-21906208)
chr2 (11-131)||(23107644-23107764)
chr2 (77-131)||(22756379-22756433)
chr2 (16-117)||(21325194-21325295)
chr2 (11-131)||(1064160-1064280)
chr2 (11-131)||(11357788-11357908)
chr2 (11-131)||(24642151-24642271)
chr2 (77-129)||(24707398-24707450)
chr2 (77-129)||(21890634-21890686)
chr2 (77-131)||(23066866-23066920)
chr2 (11-129)||(23294344-23294462)
[»] chr8 (22 HSPs)
chr8 (6-132)||(22983272-22983398)
chr8 (6-131)||(21196319-21196444)
chr8 (17-132)||(20652149-20652264)
chr8 (6-121)||(23156839-23156954)
chr8 (6-132)||(21850153-21850279)
chr8 (6-133)||(22316030-22316157)
chr8 (6-132)||(16876911-16877037)
chr8 (8-133)||(25282971-25283096)
chr8 (16-132)||(25283205-25283321)
chr8 (30-110)||(23901138-23901218)
chr8 (6-132)||(22283843-22283969)
chr8 (8-131)||(22366482-22366605)
chr8 (11-131)||(19978811-19978931)
chr8 (77-131)||(30312961-30313015)
chr8 (11-111)||(16407883-16407983)
chr8 (79-131)||(21166355-21166407)
chr8 (11-131)||(21393682-21393802)
chr8 (11-131)||(21788176-21788296)
chr8 (77-131)||(21251851-21251905)
chr8 (77-129)||(21043355-21043407)
chr8 (79-131)||(22040771-22040823)
chr8 (8-68)||(22365694-22365754)
[»] scaffold0567 (1 HSPs)
scaffold0567 (6-129)||(10098-10221)
[»] chr3 (30 HSPs)
chr3 (6-133)||(17193496-17193623)
chr3 (6-132)||(30138208-30138334)
chr3 (6-132)||(30147759-30147885)
chr3 (6-132)||(13966952-13967078)
chr3 (6-132)||(16257546-16257672)
chr3 (6-132)||(16742315-16742441)
chr3 (8-132)||(6152463-6152587)
chr3 (6-129)||(6712024-6712147)
chr3 (6-132)||(8274011-8274137)
chr3 (17-129)||(18749078-18749190)
chr3 (6-132)||(266907-267033)
chr3 (33-133)||(15095434-15095534)
chr3 (54-132)||(15610554-15610632)
chr3 (556-660)||(13888197-13888301)
chr3 (11-131)||(16371810-16371930)
chr3 (542-660)||(11021269-11021382)
chr3 (11-129)||(12498645-12498763)
chr3 (77-131)||(15062207-15062261)
chr3 (512-634)||(11657993-11658111)
chr3 (11-131)||(9523116-9523236)
chr3 (11-131)||(16491794-16491914)
chr3 (77-131)||(16692627-16692681)
chr3 (77-131)||(16806539-16806593)
chr3 (11-131)||(14876111-14876231)
chr3 (17-101)||(21764301-21764385)
chr3 (308-347)||(11021544-11021583)
chr3 (135-178)||(11658518-11658561)
chr3 (77-116)||(14126222-14126261)
chr3 (77-131)||(15209354-15209408)
chr3 (77-131)||(17490313-17490367)
[»] scaffold0692 (1 HSPs)
scaffold0692 (6-132)||(3251-3377)
[»] scaffold0225 (1 HSPs)
scaffold0225 (6-132)||(24198-24324)
[»] scaffold0076 (1 HSPs)
scaffold0076 (6-132)||(41062-41188)
[»] scaffold0021 (3 HSPs)
scaffold0021 (6-132)||(24767-24893)
scaffold0021 (6-129)||(71993-72116)
scaffold0021 (6-123)||(32798-32915)
[»] chr7 (16 HSPs)
chr7 (6-132)||(27107156-27107282)
chr7 (6-133)||(15364702-15364829)
chr7 (6-129)||(45147314-45147437)
chr7 (6-132)||(7824662-7824788)
chr7 (6-133)||(14937109-14937236)
chr7 (6-129)||(4440690-4440813)
chr7 (6-129)||(17924413-17924536)
chr7 (6-132)||(13455509-13455635)
chr7 (6-129)||(21673918-21674041)
chr7 (6-133)||(13353912-13354039)
chr7 (34-132)||(17144643-17144741)
chr7 (8-132)||(23642212-23642336)
chr7 (77-131)||(16699-16753)
chr7 (11-129)||(13666305-13666423)
chr7 (134-182)||(11908044-11908091)
chr7 (11-123)||(26117974-26118086)
[»] chr5 (15 HSPs)
chr5 (6-132)||(21936743-21936869)
chr5 (6-132)||(24581897-24582023)
chr5 (6-132)||(23504129-23504255)
chr5 (8-132)||(27011773-27011897)
chr5 (31-132)||(25243905-25244006)
chr5 (31-132)||(25308057-25308158)
chr5 (6-132)||(19566244-19566370)
chr5 (11-131)||(23574447-23574567)
chr5 (77-131)||(18776546-18776600)
chr5 (11-129)||(23440920-23441038)
chr5 (11-131)||(20342974-20343094)
chr5 (11-131)||(37542937-37543057)
chr5 (77-131)||(21881725-21881779)
chr5 (77-117)||(23517302-23517342)
chr5 (77-131)||(25423965-25424019)
[»] chr1 (11 HSPs)
chr1 (6-132)||(20830837-20830963)
chr1 (8-129)||(22135005-22135126)
chr1 (17-115)||(21201751-21201849)
chr1 (11-128)||(19855098-19855215)
chr1 (134-181)||(14932074-14932121)
chr1 (11-131)||(20835334-20835454)
chr1 (77-129)||(21749800-21749852)
chr1 (11-131)||(37677873-37677993)
chr1 (11-129)||(20939511-20939629)
chr1 (77-131)||(22361690-22361744)
chr1 (78-131)||(16078102-16078155)
[»] scaffold0047 (1 HSPs)
scaffold0047 (6-127)||(453-574)
[»] scaffold0008 (2 HSPs)
scaffold0008 (17-132)||(24695-24810)
scaffold0008 (17-133)||(232370-232486)
[»] scaffold0077 (1 HSPs)
scaffold0077 (6-132)||(27642-27768)
[»] chr4 (14 HSPs)
chr4 (6-132)||(15292531-15292657)
chr4 (8-132)||(13248420-13248544)
chr4 (8-132)||(14998091-14998215)
chr4 (8-132)||(9291610-9291734)
chr4 (16-123)||(12342247-12342353)
chr4 (24-129)||(38811698-38811803)
chr4 (27-133)||(16028905-16029010)
chr4 (16-131)||(20891765-20891880)
chr4 (77-115)||(15147015-15147053)
chr4 (77-131)||(18226560-18226614)
chr4 (80-131)||(15078482-15078533)
chr4 (77-111)||(16354579-16354613)
chr4 (77-130)||(12524520-12524573)
chr4 (11-44)||(44661327-44661360)
[»] scaffold0808 (1 HSPs)
scaffold0808 (11-132)||(430-551)
[»] scaffold0162 (1 HSPs)
scaffold0162 (8-132)||(13714-13838)
[»] scaffold0066 (1 HSPs)
scaffold0066 (8-132)||(46960-47084)
[»] scaffold0310 (1 HSPs)
scaffold0310 (6-133)||(14112-14239)
[»] scaffold0011 (2 HSPs)
scaffold0011 (17-132)||(180739-180854)
scaffold0011 (11-129)||(195083-195201)
[»] scaffold0589 (1 HSPs)
scaffold0589 (6-132)||(9790-9916)
[»] scaffold0554 (1 HSPs)
scaffold0554 (10-132)||(3966-4088)
[»] scaffold0302 (1 HSPs)
scaffold0302 (6-132)||(5979-6105)
[»] scaffold0207 (1 HSPs)
scaffold0207 (6-132)||(18851-18977)
[»] scaffold0117 (1 HSPs)
scaffold0117 (8-129)||(803-924)
[»] scaffold0028 (1 HSPs)
scaffold0028 (7-132)||(105949-106074)
[»] scaffold0266 (1 HSPs)
scaffold0266 (8-132)||(9237-9361)
[»] scaffold0160 (1 HSPs)
scaffold0160 (6-129)||(8069-8192)
[»] scaffold0369 (1 HSPs)
scaffold0369 (6-132)||(266-392)
[»] scaffold0091 (1 HSPs)
scaffold0091 (17-123)||(45312-45418)
[»] scaffold0243 (1 HSPs)
scaffold0243 (8-133)||(296-421)
[»] scaffold0876 (1 HSPs)
scaffold0876 (17-132)||(3357-3472)
[»] scaffold0327 (1 HSPs)
scaffold0327 (10-129)||(7977-8096)
[»] scaffold0132 (2 HSPs)
scaffold0132 (8-131)||(15462-15585)
scaffold0132 (6-72)||(44342-44408)
[»] scaffold0023 (2 HSPs)
scaffold0023 (17-132)||(55276-55391)
scaffold0023 (11-131)||(28749-28869)
[»] scaffold0218 (1 HSPs)
scaffold0218 (8-132)||(3320-3444)
[»] scaffold0124 (2 HSPs)
scaffold0124 (6-132)||(7184-7311)
scaffold0124 (11-129)||(13007-13125)
[»] scaffold0610 (1 HSPs)
scaffold0610 (6-132)||(8266-8392)
[»] scaffold0387 (1 HSPs)
scaffold0387 (5-92)||(14941-15028)
[»] scaffold0235 (1 HSPs)
scaffold0235 (8-129)||(26612-26733)
[»] scaffold0058 (1 HSPs)
scaffold0058 (50-131)||(75406-75487)
[»] scaffold0205 (1 HSPs)
scaffold0205 (6-131)||(9444-9569)
[»] scaffold0081 (2 HSPs)
scaffold0081 (77-131)||(19477-19531)
scaffold0081 (77-131)||(34901-34955)
[»] scaffold0042 (1 HSPs)
scaffold0042 (11-117)||(39211-39317)
[»] scaffold0017 (1 HSPs)
scaffold0017 (77-131)||(196855-196909)
[»] scaffold0501 (1 HSPs)
scaffold0501 (11-131)||(3003-3123)
[»] scaffold0198 (1 HSPs)
scaffold0198 (11-131)||(24307-24427)
[»] scaffold0106 (1 HSPs)
scaffold0106 (11-131)||(14848-14968)
[»] scaffold0020 (2 HSPs)
scaffold0020 (11-131)||(181008-181128)
scaffold0020 (11-131)||(100929-101049)
[»] scaffold0005 (1 HSPs)
scaffold0005 (77-117)||(278221-278261)
[»] scaffold0324 (1 HSPs)
scaffold0324 (77-130)||(19380-19433)
[»] scaffold0676 (1 HSPs)
scaffold0676 (11-131)||(6823-6943)
[»] scaffold0012 (1 HSPs)
scaffold0012 (77-129)||(229918-229970)
[»] scaffold1710 (1 HSPs)
scaffold1710 (11-129)||(673-791)
[»] scaffold0546 (1 HSPs)
scaffold0546 (77-131)||(3782-3836)
[»] scaffold0540 (1 HSPs)
scaffold0540 (77-131)||(7708-7762)
[»] scaffold0375 (1 HSPs)
scaffold0375 (77-119)||(3203-3245)
[»] scaffold0293 (1 HSPs)
scaffold0293 (77-131)||(13343-13397)
[»] scaffold0111 (1 HSPs)
scaffold0111 (5-63)||(3364-3422)
[»] scaffold0109 (2 HSPs)
scaffold0109 (77-131)||(9471-9525)
scaffold0109 (77-131)||(32950-33004)
[»] scaffold0044 (1 HSPs)
scaffold0044 (77-131)||(15235-15289)
[»] scaffold0031 (1 HSPs)
scaffold0031 (77-131)||(63408-63462)
[»] scaffold0093 (1 HSPs)
scaffold0093 (16-129)||(27075-27188)
[»] scaffold0507 (1 HSPs)
scaffold0507 (11-131)||(9779-9899)
[»] scaffold0358 (1 HSPs)
scaffold0358 (11-131)||(6858-6978)
[»] scaffold0228 (1 HSPs)
scaffold0228 (77-129)||(571-623)
[»] scaffold0026 (1 HSPs)
scaffold0026 (77-133)||(29820-29876)
[»] scaffold2094 (1 HSPs)
scaffold2094 (80-131)||(439-490)
[»] scaffold1602 (1 HSPs)
scaffold1602 (77-131)||(1444-1498)
[»] scaffold0621 (1 HSPs)
scaffold0621 (77-131)||(2342-2396)
[»] scaffold0333 (1 HSPs)
scaffold0333 (77-131)||(16530-16584)
[»] scaffold0305 (1 HSPs)
scaffold0305 (6-72)||(11430-11496)
[»] scaffold0298 (2 HSPs)
scaffold0298 (11-129)||(11436-11554)
scaffold0298 (11-129)||(15206-15324)
[»] scaffold0284 (1 HSPs)
scaffold0284 (77-131)||(22742-22796)
[»] scaffold0079 (1 HSPs)
scaffold0079 (77-111)||(25849-25883)
[»] scaffold0034 (1 HSPs)
scaffold0034 (11-129)||(4332-4450)
[»] scaffold0001 (1 HSPs)
scaffold0001 (77-131)||(390577-390631)
[»] scaffold1355 (1 HSPs)
scaffold1355 (77-130)||(1551-1604)
[»] scaffold0145 (1 HSPs)
scaffold0145 (77-130)||(39389-39442)


Alignment Details
Target: chr6 (Bit Score: 104; Significance: 2e-51; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 6 - 133
Target Start/End: Complemental strand, 23027360 - 23027233
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23027360 ctccaacaaaatccataaagatactatcccacttccactccggcacaaacaacggttgcatcaaacccgacgatttctgatgttcaatcttcgacttctg 23027261  T
Q  106 acaaaccaaacaagcatagacaaactct 133  Q
    |||||||||||||||||| |||||||||    
T  23027260 acaaaccaaacaagcataaacaaactct 23027233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 16382017 - 16381891
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  16382017 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 16381918  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  16381917 acaaaccaaacaagcataaacaaactc 16381891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 15078010 - 15077884
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||| |||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||| ||    
T  15078010 ctccgacaaaatccatagagatactatcccacttccactctggcacaaacaacagttgcatcaaacccgacagtttctggtgttcaatcttcgacttttg 15077911  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  15077910 acaaaccaaacaagcatatacaaactc 15077884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 21927842 - 21927965
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||| |||||||||||||||||||||| ||    
T  21927842 ctccaacaaagtccatagagatactatcccacttccactctggcacaaacaacggttgcatcaaactcaacggtctctgatgttcaatcttcgacttttg 21927941  T
Q  106 acaaaccaaacaagcatagacaaa 129  Q
    |||||||||||||||||| |||||    
T  21927942 acaaaccaaacaagcataaacaaa 21927965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 1648458 - 1648332
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||||||| ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  1648458 ctccaacaaaatccatagaaatgctatcccatttccactctggcacaaacaacggttgcatcaaacccaacggtctctgatgttcaatcttcgatttctg 1648359  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  1648358 acaaaccaaacaagcataaacaaactc 1648332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 14625001 - 14624875
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||| ||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||    
T  14625001 ctccaacaaaatcaatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttttg 14624902  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  14624901 acaaaccaaacaagcataaacaaactc 14624875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 16233665 - 16233791
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| |||||| || || |||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  16233665 ctccaacaaaatccatggaaatgctatcccacttccactctggcacaaacaatggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 16233764  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  16233765 acaaaccaaacaagcataaacaaactc 16233791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 16098687 - 16098813
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||  |||||||| || |||||||||||||||| | |||| |||||| |||||||||||| |||||||||||||||||||||||||||||| ||    
T  16098687 ctccaacaaagtccatagaaatgctatcccacttccactctagcacgaacaacagttgcatcaaactcgacggtttctgatgttcaatcttcgacttatg 16098786  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||||||||||||    
T  16098787 acaaaccaaacaagcatagacaaactc 16098813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 23996885 - 23997011
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||| | ||||||||| || |||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  23996885 ctccaacgaaatccatagaaatgctatcccatttccactctggcacaaacaatggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 23996984  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  23996985 acaaaccaaacaagcataaacaaactc 23997011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 8 - 132
Target Start/End: Original strand, 18572290 - 18572414
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    |||||||  |||||||| || ||||| |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  18572290 ccaacaaagtccatagaaatgctatctcacttccactctggcacaaacaacggttgcatcaaacctgacggtctctgatgttcaatcttcgatttctgac 18572389  T
Q  108 aaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||| ||||||||    
T  18572390 aaaccaaacaagcataaacaaactc 18572414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 8 - 132
Target Start/End: Complemental strand, 18837550 - 18837426
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    |||||||  |||||||| || ||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| | || |||||||    
T  18837550 ccaacaaagtccatagaaatgctatcccacgtccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcattgatttctgac 18837451  T
Q  108 aaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||| ||||||||    
T  18837450 aaaccaaacaagcataaacaaactc 18837426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 19865329 - 19865449
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  19865329 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaa 19865428  T
Q  111 ccaaacaagcatagacaaact 131  Q
    ||||||| | ||| |||||||    
T  19865429 ccaaacaggaatacacaaact 19865449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 27566619 - 27566513
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||||||||| | |||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  27566619 acaaaatccatggatatactatcccacttccattctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaa 27566520  T
Q  111 ccaaaca 117  Q
    | |||||    
T  27566519 ctaaaca 27566513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 119
Target Start/End: Complemental strand, 16963018 - 16962976
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaag 119  Q
    ||||||||||| |||||||||||||||||||||| ||||||||    
T  16963018 ggtttctgatgctcaatcttcgacttctgacaaatcaaacaag 16962976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 22078263 - 22078209
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||||    
T  22078263 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaact 22078209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 27331006 - 27330954
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 129  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  27331006 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaa 27330954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 27391746 - 27391694
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 129  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  27391746 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaa 27391694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 5838792 - 5838738
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| || | ||||||||||||||||| |||||||| ||| |||||||    
T  5838792 ggtttctgatgctcgaccttcgacttctgacaaatcaaacaagaatacacaaact 5838738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 15460047 - 15460097
Alignment:
Q  80 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 130  Q
    ||||||||||||||||| ||||||||||||  |||||| ||||| ||||||    
T  15460047 ttctgatgttcaatcttagacttctgacaagtcaaacacgcatacacaaac 15460097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 119
Target Start/End: Complemental strand, 18407515 - 18407473
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaag 119  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||    
T  18407515 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaag 18407473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 20636874 - 20636820
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  20636874 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 20636820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 2e-51; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 6 - 133
Target Start/End: Complemental strand, 23817082 - 23816955
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  23817082 ctccaacaaaatccatagcgatactatcccacttccactctggcacaaacaacggttgtatcaaacctgacggtttctgatgttcaatcttcgacttctg 23816983  T
Q  106 acaaaccaaacaagcatagacaaactct 133  Q
    |||||||||||||||||| |||||||||    
T  23816982 acaaaccaaacaagcataaacaaactct 23816955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 24831226 - 24831100
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||| | ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  24831226 ctccaacgaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 24831127  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  24831126 acaaaccaaacaagcataaacaaactc 24831100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 6 - 133
Target Start/End: Original strand, 25129051 - 25129178
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||  |||||||||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  25129051 ctccaacaaagtccatagagatattatcccatttccactctggcataaacaacggttgcatcaaacccgacggtttatgatattcaatcttcgacttctg 25129150  T
Q  106 acaaaccaaacaagcatagacaaactct 133  Q
    |||||||||||||||||| |||||||||    
T  25129151 acaaaccaaacaagcataaacaaactct 25129178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 24569707 - 24569581
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||| |||||||| ||  ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||     
T  24569707 ctccaacaatgtccatagaaatgttatcccacttccactctggcacaaacaacagttgcatcaaacccgacggtttctgatgttcaatcttcgatttcta 24569608  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  24569607 acaaaccaaacaagcatatacaaactc 24569581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 12640269 - 12640146
Alignment:
Q  9 caacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgaca 108  Q
    |||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  12640269 caacaaaatccatagaaatgctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctgaca 12640170  T
Q  109 aaccaaacaagcatagacaaactc 132  Q
    |||||| |||| ||| ||||||||    
T  12640169 aaccaagcaagaataaacaaactc 12640146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 22276682 - 22276808
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | |||||    
T  22276682 ctccaacaaaatccatagaaatgctatcccatttccattttggtacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttctatttctg 22276781  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  22276782 acaaaccaaacaagcataaacaaactc 22276808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 22761598 - 22761481
Alignment:
Q  16 atccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 115  Q
    ||||||||||||  ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  22761598 atccatagagatgatatcccacttccactctggcacaaacaacggttacatcaaacccgacggtttctgatgttcaatcttcgatttctaacaaaccaaa 22761499  T
Q  116 caagcatagacaaactct 133  Q
     ||||||| |||||||||    
T  22761498 gaagcataaacaaactct 22761481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 21906208 - 21906085
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| || |||||| |||||||| ||||||||||  || |||||||||||||||||||| |  ||||||||||||||| ||||||| ||||||||    
T  21906208 ctccaacaaaattcatagatatactatcacacttccactccggtacaaacaacggttgcatcaagcttgacggtttctgatgtccaatcttagacttctg 21906109  T
Q  106 acaaaccaaacaagcatagacaaa 129  Q
    |||||||| ||||||||| |||||    
T  21906108 acaaaccacacaagcatacacaaa 21906085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 23107764 - 23107644
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  23107764 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaa 23107665  T
Q  111 ccaaacaagcatagacaaact 131  Q
    ||||||| | ||| |||||||    
T  23107664 ccaaacaggaatacacaaact 23107644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 22756433 - 22756379
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    |||||||||||||||||||||||||||| |||||||||||| | ||| |||||||    
T  22756433 ggtttctgatgttcaatcttcgacttcttacaaaccaaacaggaatacacaaact 22756379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 21325295 - 21325194
Alignment:
Q  16 atccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 115  Q
    |||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||| |||    
T  21325295 atccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaactaaa 21325196  T
Q  116 ca 117  Q
    ||    
T  21325195 ca 21325194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 1064160 - 1064280
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| ||||||||||||||| |||||||||||||  || |||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  1064160 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 1064259  T
Q  111 ccaaacaagcatagacaaact 131  Q
    ||||||| ||||| |||||||    
T  1064260 ccaaacaggcataaacaaact 1064280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 11357908 - 11357788
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||||||||||||||||||||||||||  || |||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  11357908 acaaaatccatagagatactatcccacttccactccggtacatctaacggtgccaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 11357809  T
Q  111 ccaaacaagcatagacaaact 131  Q
     |||||| ||||| |||||||    
T  11357808 tcaaacaggcataaacaaact 11357788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 24642151 - 24642271
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| ||||||||| || ||||||||||||||||  ||||||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  24642151 acaaaatccatagaaatgctatcccacttccactccggcacatccaacggtgccaacaaccctgcaggcttctgatgctcaaccttagacttctgacaag 24642250  T
Q  111 ccaaacaagcatagacaaact 131  Q
     |||||| |||||||||||||    
T  24642251 tcaaacatgcatagacaaact 24642271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 24707450 - 24707398
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 129  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| ||| |||||    
T  24707450 ggtttctaatgttcaatcttcgacttctgacaaactaaacaagaatacacaaa 24707398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 21890686 - 21890634
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 129  Q
    ||||||| |||||||| ||||||||||||||||| |||||||| ||| |||||    
T  21890686 ggtttctaatgttcaaccttcgacttctgacaaatcaaacaagaatacacaaa 21890634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 23066866 - 23066920
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| |||| ||||||||||||||||| |||||||  ||| |||||||    
T  23066866 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaataatacacaaact 23066920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 23294344 - 23294462
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| ||||||||| || ||||||||||| ||||  ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||     
T  23294344 acaaaatccatagaaatgctatcccactttcactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaag 23294443  T
Q  111 ccaaacaagcatagacaaa 129  Q
     |||||| ||||| |||||    
T  23294444 tcaaacatgcatacacaaa 23294462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 7e-51; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 22983272 - 22983398
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  22983272 ctccaacaaaatccatagagatactatcccaattccactctggcacaaacaacggttgcatcaaaccctgcggtttctgatgttcaatcttcgacttctg 22983371  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  22983372 acaaaccaaacaagcatatacaaactc 22983398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 21196444 - 21196319
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  21196444 ctccaacaaaatccatagagatactatcccacctccactatggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatttttgacttctg 21196345  T
Q  106 acaaaccaaacaagcatagacaaact 131  Q
    |||||||||||||||||| |||||||    
T  21196344 acaaaccaaacaagcataaacaaact 21196319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 20652264 - 20652149
Alignment:
Q  17 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 116  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20652264 tccatagagatactatcccacttccactctagcacaaacaatggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaagc 20652165  T
Q  117 aagcatagacaaactc 132  Q
    ||||||| ||||||||    
T  20652164 aagcatacacaaactc 20652149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 23156954 - 23156839
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23156954 ctccaacaaaatccatagagatactatcccacttccaatctggtacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgacttctg 23156855  T
Q  106 acaaaccaaacaagca 121  Q
    ||||||||||||||||    
T  23156854 acaaaccaaacaagca 23156839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 21850279 - 21850153
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  21850279 ctccaacaaaatccatagaaatgctatcccatttccactatggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 21850180  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  21850179 acaaaccaaacaagcataaacaaactc 21850153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 6 - 133
Target Start/End: Original strand, 22316030 - 22316157
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||  |||||||||||| | ||||||||||||| |||||||||||||||||||||||||| ||| | ||||| |||||||||||||||||||||    
T  22316030 ctccaacaaagtccatagagatattgtcccacttccactctggcacaaacaacggttgcatcaaactcgatgatttctaatgttcaatcttcgacttctg 22316129  T
Q  106 acaaaccaaacaagcatagacaaactct 133  Q
    |||||||||||||||||| |||||||||    
T  22316130 acaaaccaaacaagcataaacaaactct 22316157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 16877037 - 16876911
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||    
T  16877037 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctg 16876938  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||  ||| ||| ||||||||    
T  16876937 acaaaccaagtaagaataaacaaactc 16876911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 8 - 133
Target Start/End: Original strand, 25282971 - 25283096
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    ||||||| ||||||| ||||||||||| |||||||||  ||||||||||||||||||||||||||| ||   ||||||||||||||||| ||||||||||    
T  25282971 ccaacaaaatccatatagatactatcctacttccactcaggcacaaacaacggttgcatcaaaccctacatcttctgatgttcaatcttagacttctgac 25283070  T
Q  108 aaaccaaacaagcatagacaaactct 133  Q
    |||||||||||||||| |||||||||    
T  25283071 aaaccaaacaagcatacacaaactct 25283096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 25283205 - 25283321
Alignment:
Q  16 atccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 115  Q
    ||||||| ||||||||||| |||||||||  ||||||||||||||||||||||||||| ||   ||||||||||||||||| ||||||||||||||||||    
T  25283205 atccatatagatactatcctacttccactcaggcacaaacaacggttgcatcaaaccctacatcttctgatgttcaatcttagacttctgacaaaccaaa 25283304  T
Q  116 caagcatagacaaactc 132  Q
    |||||||| ||||||||    
T  25283305 caagcatacacaaactc 25283321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 23901138 - 23901218
Alignment:
Q  30 tatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    ||||||||||||| | | |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  23901138 tatcccacttccaatctagcacaaacaacggttgcatcaaacccgacgatttatgatgttcaatcttcgacttctgacaaa 23901218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 22283843 - 22283969
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||| | ||| |||| ||||||||||  || | ||||||||||||| |||||||||| |  ||||||||||||||||| ||||||||    
T  22283843 ctccaacaaaatccatataaatattatctcacttccactcaggaataaacaacggttgcgtcaaacccgaagacttctgatgttcaatcttagacttctg 22283942  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    ||| | |||||||||||| ||||||||    
T  22283943 acagatcaaacaagcatacacaaactc 22283969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 22366605 - 22366482
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    ||||||| |||||| || |||||||||||||||||||  |||||||| || ||||||||||  || |||||  ||||||| || ||||| || |||||||    
T  22366605 ccaacaaaatccatcgaaatactatcccacttccactccggcacaaaaaatggttgcatcactcctgacggcatctgatgctcgatcttagatttctgac 22366506  T
Q  108 aaaccaaacaagcatagacaaact 131  Q
    |||||||||||||| | |||||||    
T  22366505 aaaccaaacaagcaaacacaaact 22366482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 19978811 - 19978931
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  19978811 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaa 19978910  T
Q  111 ccaaacaagcatagacaaact 131  Q
    ||||||| | ||| |||||||    
T  19978911 ccaaacaggaatacacaaact 19978931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 30313015 - 30312961
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | |||||||||||    
T  30313015 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatagacaaact 30312961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 16407983 - 16407883
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| ||||||| ||||||    |||| |  ||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  16407983 acaaaatccatggatatactatcccatttccactctggcacgtctaacgataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaa 16407884  T
Q  111 c 111  Q
    |    
T  16407883 c 16407883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 21166407 - 21166355
Alignment:
Q  79 tttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    |||||||||||||||||||||||||||| |||||||||| | ||| |||||||    
T  21166407 tttctgatgttcaatcttcgacttctgataaaccaaacaggaatacacaaact 21166355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 21393802 - 21393682
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| ||||||| |||||||   |||  |  ||||| ||| |  ||||||||||| |||| |||||||||||| ||||    
T  21393802 acaaaatccatggatatactatcccatttccactatggcacatctaaccataccatcataccagcaggtttctgatgctcaaccttcgacttctggcaaa 21393703  T
Q  111 ccaaacaagcatagacaaact 131  Q
     |||||||||||| |||||||    
T  21393702 tcaaacaagcatacacaaact 21393682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 21788296 - 21788176
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| ||||||| |||||||   |||  |  ||||| ||| |  ||||||||||| |||| |||||||||||| ||||    
T  21788296 acaaaatccatggatatactatcccatttccactatggcacatctaaccataccatcataccagcaggtttctgatgctcaaccttcgacttctggcaaa 21788197  T
Q  111 ccaaacaagcatagacaaact 131  Q
     |||||||||||| |||||||    
T  21788196 tcaaacaagcatacacaaact 21788176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 21251851 - 21251905
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||||    
T  21251851 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatatacaaact 21251905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 21043355 - 21043407
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 129  Q
    ||||||||||| |||| |||||| ||||||||||||||||||| ||| |||||    
T  21043355 ggtttctgatgctcaaccttcgatttctgacaaaccaaacaagaatacacaaa 21043407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 22040771 - 22040823
Alignment:
Q  79 tttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  22040771 tttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 22040823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 22365754 - 22365694
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatca 68  Q
    ||||||| |||||| || ||| |||||||||||||||  ||||||||||| ||||||||||    
T  22365754 ccaacaaaatccatcgaaatattatcccacttccactccggcacaaacaatggttgcatca 22365694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 10098 - 10221
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  10098 ctccaacaaaatccatagagatactatcccacttccacactggcacaaacaacggttgcatcaaaccctacggtttctgatgttcaatcttcgatttctg 10197  T
Q  106 acaaaccaaacaagcatagacaaa 129  Q
    |||||||||||||||||| |||||    
T  10198 acaaaccaaacaagcataaacaaa 10221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 4e-49; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 6 - 133
Target Start/End: Original strand, 17193496 - 17193623
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  17193496 ctccaacaaaatccatagagatactatcccacttccactctggcacaaacaacatttgcatcaaacccgatggtttctgatgttcaatcttcgacttctg 17193595  T
Q  106 acaaaccaaacaagcatagacaaactct 133  Q
    ||||| |||||||||||| |||||||||    
T  17193596 acaaatcaaacaagcataaacaaactct 17193623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 30138208 - 30138334
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  30138208 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 30138307  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  30138308 acaaaccaaacaagcataaacaaactc 30138334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 30147759 - 30147885
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  30147759 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 30147858  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  30147859 acaaaccaaacaagcataaacaaactc 30147885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 13967078 - 13966952
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||||||||| |||||    
T  13967078 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgatggtctttgatgttcaatcttcgatttctg 13966979  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  13966978 acaaaccaaacaagcataaacaaactc 13966952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 16257546 - 16257672
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  16257546 ctccaacaaaatccatagaaatgttatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgatcaatcttcgatttctg 16257645  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  16257646 acaaaccaaacaagcataaacaaactc 16257672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 16742441 - 16742315
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||| ||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||    
T  16742441 ctccaacaaaatccatagaaatgctattccacttccactctggcacaaacaacggttgcatcaaacctgacggtctctgatgttcaatcttcgatttctg 16742342  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  16742341 acaaaccaaacaagcataaacaaactc 16742315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 8 - 132
Target Start/End: Complemental strand, 6152587 - 6152463
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    ||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  6152587 ccaacaaaatccatagagatactatcccacttccactcaagcacaaacaacggttgcatcaaacccgacggtctttgatgttcaatcttcgacttctgac 6152488  T
Q  108 aaaccaaacaagcatagacaaactc 132  Q
    |||| |||||| |||| ||||||||    
T  6152487 aaactaaacaaacataaacaaactc 6152463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 6712147 - 6712024
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||  ||||| |||||| ||||||||||||||| |||||||||||||  ||||||||||||||||| |||||||||||||||||| ||||||||    
T  6712147 ctccaacaaagtccattgagatattatcccacttccactctggcacaaacaacaattgcatcaaacccgacgatttctgatgttcaatcttagacttctg 6712048  T
Q  106 acaaaccaaacaagcatagacaaa 129  Q
    |||||||||||||||||| |||||    
T  6712047 acaaaccaaacaagcataaacaaa 6712024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 8274137 - 8274011
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||||||||||||||| ||||||||| || ||||||||||||||||||||| |||||||||||||||| || |||||    
T  8274137 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaagaatggttgcatcaaacccgacggtctctgatgttcaatctttgatttctg 8274038  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    ||||||||| |||| ||| ||||||||    
T  8274037 acaaaccaagcaagaataaacaaactc 8274011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 18749078 - 18749190
Alignment:
Q  17 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 116  Q
    ||||||||||||||||| || ||||||| ||||| ||||||||||||||||||| |||||||||| || ||||||||||||||||||| |||||||||||    
T  18749078 tccatagagatactatctcatttccactctggcaaaaacaacggttgcatcaaaaccgacggtttatgttgttcaatcttcgacttctaacaaaccaaac 18749177  T
Q  117 aagcatagacaaa 129  Q
    ||| ||| |||||    
T  18749178 aagaataaacaaa 18749190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 267033 - 266907
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| || |||||| ||| |||||||||||||||  || |||||||| ||||||||||||||| | |  || || ||||||||||||||||||||    
T  267033 ctccaacaaaattcatagaaatattatcccacttccactccggtacaaacaatggttgcatcaaacccaatgacttttggtgttcaatcttcgacttctg 266934  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  266933 acaaaccaaacaagcatacacaaactc 266907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 15095434 - 15095534
Alignment:
Q  33 cccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||   |||||||||||||||||||||||||||||||  || |||||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  15095434 cccacttccacgcaggcacaaacaacggttgcatcaaacccgacgacttttgatgttcaatcttcgacttttgaaaaaccaaacaagcatacacaaactc 15095533  T
Q  133 t 133  Q
    |    
T  15095534 t 15095534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 15610554 - 15610632
Alignment:
Q  54 acaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||| ||| ||||    
T  15610554 acaacggttgcatcaaacccgatggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacagactc 15610632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 556 - 660
Target Start/End: Original strand, 13888197 - 13888301
Alignment:
Q  556 tcaagatccaacacaagatttatcttaaccctattactttcatcccagtgatggacctcattttgctacaatcaagcctcaattgaacacttcttattat 655  Q
    ||||||||||||||||||| | |||| ||| || ||  ||||||||||||||||||||||||  | | ||||||||||||| |||||||| ||  |||||    
T  13888197 tcaagatccaacacaagatctctcttcaccttactatgttcatcccagtgatggacctcattcagtttcaatcaagcctcagttgaacacgtccaattat 13888296  T
Q  656 caagc 660  Q
    |||||    
T  13888297 caagc 13888301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 16371810 - 16371930
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  16371810 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaa 16371909  T
Q  111 ccaaacaagcatagacaaact 131  Q
    | ||||||| ||| |||||||    
T  16371910 ctaaacaagaatacacaaact 16371930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 542 - 660
Target Start/End: Complemental strand, 11021382 - 11021269
Alignment:
Q  542 aacaacaatggagttcaagatccaacacaagatttatcttaaccctattactttcatcccagtgatggacctcattttgctacaatcaagcctcaattga 641  Q
    ||||| ||||||||||||||||||||||| ||||| |||| ||||| ||     ||||| |||||||||||||||| ||  |||| |||||||| |||||    
T  11021382 aacaataatggagttcaagatccaacacaggatttgtcttgaccctgtt-----catcctagtgatggacctcattctgtgacaaccaagcctccattga 11021288  T
Q  642 acacttcttattatcaagc 660  Q
    |||| ||  ||||||||||    
T  11021287 acacgtccaattatcaagc 11021269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 12498645 - 12498763
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| ||||||||| ||||||||||| ||||| | |||||||   |||| |  ||||| ||| |  ||||||||||||| ||||||||||||||||||||    
T  12498645 acaaaatccatagatatactatcccatttccattctggcacatctaacgataccatcataccagcaggtttctgatgtttaatcttcgacttctgacaaa 12498744  T
Q  111 ccaaacaagcatagacaaa 129  Q
    | ||||||| ||| |||||    
T  12498745 ctaaacaagaatacacaaa 12498763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 15062207 - 15062261
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||    
T  15062207 ggtttctgatgttcaatcttcgacttctgacaaactaaacaagaatacacaaact 15062261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 512 - 634
Target Start/End: Complemental strand, 11658111 - 11657993
Alignment:
Q  512 caatggtgtgaaacaacggaaacgctaacaaacaacaatggagttcaagatccaacacaagatttatcttaaccctattactttcatcccagtgatggac 611  Q
    |||||||||||||||||||||| ||||| ||    |||||||||||||||| |||| || |||||||||| ||| |||||| |||  |  ||| ||||||    
T  11658111 caatggtgtgaaacaacggaaatgctaataa----caatggagttcaagattcaacgcaggatttatcttcaccttattacgttcgacttagtcatggac 11658016  T
Q  612 ctcattttgctacaatcaagcct 634  Q
    ||||||  | | |||||||||||    
T  11658015 ctcattcaggtgcaatcaagcct 11657993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 9523116 - 9523236
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| ||||||| |||||||   || |||  ||||| ||| |  ||||||||||| ||||  ||||||||||||||||    
T  9523116 acaaaatccatggatatactatcccatttccactctggcacatctaatggtatcatcataccagcaggtttctgatgctcaactttcgacttctgacaaa 9523215  T
Q  111 ccaaacaagcatagacaaact 131  Q
     |||||||| ||| |||||||    
T  9523216 tcaaacaagaatacacaaact 9523236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 16491914 - 16491794
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||| ||||||| ||||||| |||||||   |||| |  ||||| ||| |  ||||||||||| |||| |||||||||||||||||    
T  16491914 acaaaatccatggatatattatcccatttccactctggcacatctaacgataccatcataccagcaggtttctgatgctcaaccttcgacttctgacaaa 16491815  T
Q  111 ccaaacaagcatagacaaact 131  Q
     |||||||| ||| |||||||    
T  16491814 tcaaacaagaatacacaaact 16491794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 16692627 - 16692681
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  16692627 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 16692681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 16806593 - 16806539
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  16806593 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 16806539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 14876231 - 14876111
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  ||||||||||||||||||||| |||||||| |||    
T  14876231 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcaacttctgataaa 14876132  T
Q  111 ccaaacaagcatagacaaact 131  Q
    | ||||| | ||| |||||||    
T  14876131 ctaaacaggaatacacaaact 14876111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 21764385 - 21764301
Alignment:
Q  17 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgact 101  Q
    |||||||||||| |||| || ||||| ||||| ||||||||| ||||| | ||||| ||||  |||| |||||||||||| ||||    
T  21764385 tccatagagatattatctcatttccattttggaacaaacaactgttgccttaaaccagacgacttctaatgttcaatctttgact 21764301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 308 - 347
Target Start/End: Complemental strand, 11021583 - 11021544
Alignment:
Q  308 cttctattgagagaaggttgttacgatttagttacgcttc 347  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  11021583 cttctcttgagagaaggttgttacgattcagttacgcttc 11021544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 11658561 - 11658518
Alignment:
Q  135 atagctctaactaacttgccacataagcatgtaaaactgttatg 178  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||    
T  11658561 atagctctaactaacttgccacataaaaatgtacaactgttatg 11658518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 14126261 - 14126222
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaac 116  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  14126261 ggtttctgatgctcaatcttcgacttctgacaaactaaac 14126222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 15209354 - 15209408
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| ||||| |||||||||||||||| |||||| | ||| |||||||    
T  15209354 ggtttctgatgctcaattttcgacttctgacaaatcaaacaggaatacacaaact 15209408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 17490313 - 17490367
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  17490313 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 17490367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 3377 - 3251
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  3377 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 3278  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  3277 acaaaccaaacaagcataaacaaactc 3251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 24198 - 24324
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  24198 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 24297  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  24298 acaaaccaaacaagcataaacaaactc 24324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 41062 - 41188
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  41062 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 41161  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  41162 acaaaccaaacaagcataaacaaactc 41188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 99; Significance: 2e-48; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 24767 - 24893
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||| |||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24767 ctccgacaaaatcgatagagatactatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttttg 24866  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    ||||||||| |||||||| ||||||||    
T  24867 acaaaccaatcaagcatatacaaactc 24893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 71993 - 72116
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||  |||||| | || |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  71993 ctccaacaaagtccatataaatgctatcccacttccactctagcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttcta 72092  T
Q  106 acaaaccaaacaagcatagacaaa 129  Q
    |||||||||||||||||| |||||    
T  72093 acaaaccaaacaagcatatacaaa 72116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 6 - 123
Target Start/End: Complemental strand, 32915 - 32798
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||  |||||||| |  |||||||||||||||| ||| |||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  32915 ctccaacaaagtccatagaaaggctatcccacttccactctggaacaaacaatggttacatcaaacctgacggtttctgatgttcaatcttcgacttctg 32816  T
Q  106 acaaaccaaacaagcata 123  Q
    ||||||||||||| ||||    
T  32815 acaaaccaaacaaccata 32798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 2e-48; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 27107282 - 27107156
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  27107282 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 27107183  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  27107182 acaaaccaaacaagcataaacaaactc 27107156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 6 - 133
Target Start/End: Original strand, 15364702 - 15364829
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||  ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  15364702 ctccaacaaagtccatagagttgctatcccacttccactttggcacaaacaacggttgcatcaaacctgacggtttctgatgttcaatcttcgacttatg 15364801  T
Q  106 acaaaccaaacaagcatagacaaactct 133  Q
    ||||||||||| |||||| |||||||||    
T  15364802 acaaaccaaactagcataaacaaactct 15364829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 45147314 - 45147437
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||  |||||||||||  ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45147314 ctccaacaaagtccatagagatgttatcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 45147413  T
Q  106 acaaaccaaacaagcatagacaaa 129  Q
    |||||||||||||||||| |||||    
T  45147414 acaaaccaaacaagcataaacaaa 45147437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 7824662 - 7824788
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  7824662 ctccaacaaaatccatagaaatgttatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 7824761  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  7824762 acaaaccaaacaagcataaacaaactc 7824788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 6 - 133
Target Start/End: Original strand, 14937109 - 14937236
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||  ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  14937109 ctccaacaaagtccatagagttgctatcccacttccactgtggcacaaacaacggttgcatcaaacctgacggtttctgatgttcaatcttcgacttatg 14937208  T
Q  106 acaaaccaaacaagcatagacaaactct 133  Q
    ||||||||||| |||||| |||||||||    
T  14937209 acaaaccaaactagcataaacaaactct 14937236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 4440690 - 4440813
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  4440690 ctccaacaaaatccatagagatattatcccacttccactctggcacaaataacggttgcatcaaaccgtacggtttctgatgttcaatcgtcgacttctg 4440789  T
Q  106 acaaaccaaacaagcatagacaaa 129  Q
    |||||||| ||||||||| |||||    
T  4440790 acaaaccatacaagcatatacaaa 4440813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 17924413 - 17924536
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||  ||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17924413 ctccaacaaagtccatagagatactatctcactttcactctggctcaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgacttctg 17924512  T
Q  106 acaaaccaaacaagcatagacaaa 129  Q
    |||||| || |||||||| |||||    
T  17924513 acaaacaaagcaagcataaacaaa 17924536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 13455509 - 13455635
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| |||||||||||||||||| || ||||| | ||| |||||||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  13455509 ctccaacaaaatccatagagatactatctcatttccattctggaacaaacaacggttgcatcaaacctaacggtttctgatgttcaaccttcgacttctg 13455608  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    ||||||||| |||||||| ||||||||    
T  13455609 acaaaccaagcaagcataaacaaactc 13455635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 21674041 - 21673918
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||  ||||||||||||||||| |||||||||| | |||||| |||||||||||||||||| |||||| | ||||||||||||||||| |||||    
T  21674041 ctccaacaaagtccatagagatactatctcacttccactctagcacaatcaacggttgcatcaaacctgacggtctttgatgttcaatcttcgatttctg 21673942  T
Q  106 acaaaccaaacaagcatagacaaa 129  Q
    ||||||||| |||||||| |||||    
T  21673941 acaaaccaagcaagcataaacaaa 21673918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 6 - 133
Target Start/End: Original strand, 13353912 - 13354039
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||  || ||||||||||| | ||| ||||| | ||  ||||||||||||||||||||||| || | |||||||||||||||||| |||||||     
T  13353912 ctccaacaaattcgatagagatactgttccatttccattatgaaacaaacaacggttgcatcaaacctgatgatttctgatgttcaatcttagacttcta 13354011  T
Q  106 acaaaccaaacaagcatagacaaactct 133  Q
    |||||||||||||||||| |||||||||    
T  13354012 acaaaccaaacaagcataaacaaactct 13354039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 17144741 - 17144643
Alignment:
Q  34 ccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||  || |||||||||| ||||||||||||||| || |||||||||| |||||| ||||| ||||||| |||||||||||| ||||||||    
T  17144741 ccacttccactccggtacaaacaacgattgcatcaaacccgatggcttctgatgttaaatcttagacttttgacaaatcaaacaagcatacacaaactc 17144643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 132
Target Start/End: Original strand, 23642212 - 23642336
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    ||||||| || |||||| ||| |||||||||||||||  || |||||||||||||| |||||||| ||||  |||||||||||||| || ||||| ||||    
T  23642212 ccaacaaaatacatagaaatattatcccacttccactcagggacaaacaacggttgaatcaaacctgacgacttctgatgttcaatgttagactt-tgac 23642310  T
Q  108 -aaaccaaacaagcatagacaaactc 132  Q
     ||| |||||||||||| ||||||||    
T  23642311 aaaatcaaacaagcatacacaaactc 23642336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 16753 - 16699
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  16753 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 16699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 13666305 - 13666423
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| ||||||||| || ||||||||||||||||  ||||||  || ||||  || ||| || |  || ||||||||||||| ||||||||||||||||     
T  13666305 acaaaatccatagaaatgctatcccacttccactccggcacatccatcggtgtcaacaaccctgcaggcttctgatgttcaaccttcgacttctgacaag 13666404  T
Q  111 ccaaacaagcatagacaaa 129  Q
     |||||| ||||| |||||    
T  13666405 tcaaacatgcatacacaaa 13666423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 11908044 - 11908091
Alignment:
Q  134 catagctctaactaacttgccacataagcatgtaaaactgttatgacag 182  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||||||    
T  11908044 catagctctaactaacttgccacgtaagcatgtaata-tgttatgacag 11908091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 26118086 - 26117974
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||||||||||||||||||||||||||  || |||   ||||||  || ||| ||||  || |||||||| |||| ||| ||||||||||| |    
T  26118086 acaaaatccatagagatactatcccacttccactccggtacatctaacggtgtcaacaaccccgcaggcttctgatgctcaaccttggacttctgacaga 26117987  T
Q  111 ccaaacaagcata 123  Q
     |||||| |||||    
T  26117986 tcaaacaggcata 26117974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 2e-48; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 21936869 - 21936743
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  21936869 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 21936770  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  21936769 acaaaccaaacaagcataaacaaactc 21936743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 24581897 - 24582023
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||    
T  24581897 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctg 24581996  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  24581997 acaaaccaaacaagcataaacaaactc 24582023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 23504129 - 23504255
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || ||    
T  23504129 ctccaacaaaatccataaagatactatcccaattccactctggcacaaacaacagttgcatcaaacccgacggtctctgatgttcaatcttcgatttttg 23504228  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  23504229 acaaaccaaacaagcataaacaaactc 23504255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 8 - 132
Target Start/End: Original strand, 27011773 - 27011897
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    |||||||  |||||||| || ||||| |||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  27011773 ccaacaaagtccatagaaatgctatctcacttccactctggcacaaacaacggttgcatcaaacccgacgttctctgatgttcaatcttcgatttctgac 27011872  T
Q  108 aaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||| ||||||||    
T  27011873 aaaccaaacaagcataaacaaactc 27011897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 25244006 - 25243905
Alignment:
Q  31 atcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 130  Q
    ||||| |||||||| | |||||||||||||||||||||||||||| |  ||||||||||||||||| ||||||||||||| |||||||||||  ||||||    
T  25244006 atcccgcttccactctagcacaaacaacggttgcatcaaacccgatgacttctgatgttcaatcttagacttctgacaaatcaaacaagcatgcacaaac 25243907  T
Q  131 tc 132  Q
    ||    
T  25243906 tc 25243905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 25308158 - 25308057
Alignment:
Q  31 atcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 130  Q
    ||||| |||||||| | |||||||||||||||||||||||||||| |  ||||||||||||||||| ||||||||||||| |||||||||||  ||||||    
T  25308158 atcccgcttccactctagcacaaacaacggttgcatcaaacccgatgacttctgatgttcaatcttagacttctgacaaatcaaacaagcatgcacaaac 25308059  T
Q  131 tc 132  Q
    ||    
T  25308058 tc 25308057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 19566370 - 19566244
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||  ||||| || ||||||||||| ||||||| |||||||||||||||||||||||   | ||||| |||||||| |||||||| || |||||    
T  19566370 ctccaacaaagtccatcgaaatactatcccaattccactctggcacaaacaacggttgcatcatttcagacggcttctgatgctcaatcttagatttctg 19566271  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||| |||||| |||| | ||||||    
T  19566270 acaaacgaaacaatcatacaaaaactc 19566244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 23574447 - 23574567
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  23574447 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaa 23574546  T
Q  111 ccaaacaagcatagacaaact 131  Q
    | ||||| | ||| |||||||    
T  23574547 ctaaacaggaatacacaaact 23574567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 18776546 - 18776600
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||| |||||||    
T  18776546 ggtttctgatgctcaatcttcgacttctgacaaactaaacaagaatacacaaact 18776600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 23440920 - 23441038
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  |||||||||||||||||||||||||| |||||||    
T  23440920 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttatgacaaa 23441019  T
Q  111 ccaaacaagcatagacaaa 129  Q
    | ||||||| ||| |||||    
T  23441020 ctaaacaagaatacacaaa 23441038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 20342974 - 20343094
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| ||||||||||||||| |||||||||||||  || ||   |||||||  || ||| || |  || ||||||||||||| ||| |||||||||||||    
T  20342974 acaaaatccatagagatactgtcccacttccactccggtacgtccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttggacttctgacaaa 20343073  T
Q  111 ccaaacaagcatagacaaact 131  Q
     |||||| ||||| |||||||    
T  20343074 tcaaacaggcataaacaaact 20343094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 37543057 - 37542937
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| ||||||||||||| | ||||||||||||| ||| |||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  37543057 acaaaatccatagagataatgtcccacttccactctggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 37542958  T
Q  111 ccaaacaagcatagacaaact 131  Q
    ||||||| ||||| |||||||    
T  37542957 ccaaacaggcataaacaaact 37542937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 21881725 - 21881779
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    |||||||||||||||||||| |||||||||||||| ||||| | ||| |||||||    
T  21881725 ggtttctgatgttcaatctttgacttctgacaaactaaacaggaatacacaaact 21881779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 23517302 - 23517342
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 117  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  23517302 ggtttctgatgttcaatcttcaacttctgacaaactaaaca 23517342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 25423965 - 25424019
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  25423965 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 25424019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 2e-48; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 20830963 - 20830837
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  20830963 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctg 20830864  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  20830863 acaaaccaaacaagcataaacaaactc 20830837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 22135126 - 22135005
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    |||||||  |||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||| | ||||||||||||| |||||||||    
T  22135126 ccaacaaagtccatagagatactatcccacttctactgtggcacaaacaacagttgcatcaaacccgacggttttttatgttcaatcttcaacttctgac 22135027  T
Q  108 aaaccaaacaagcatagacaaa 129  Q
    |||||||||||||||| |||||    
T  22135026 aaaccaaacaagcataaacaaa 22135005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 21201849 - 21201751
Alignment:
Q  17 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 115  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| || |||||||||||||| |||||||||| ||||| ||||    
T  21201849 tccatagagatactatcccacttccactctggcacaaacaatggttgcatcaaactcgatggcttctgatgttcaattttcgacttctaacaaatcaaa 21201751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 19855098 - 19855215
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| ||||||||| || |||||||||||||||| |||||||  |||||||  || ||| ||||  || |||||||| |||| ||| ||||||||||||     
T  19855098 acaaaatccatagaaatgctatcccacttccactctggcacatccaacggtgtcaacaaccccgcaggcttctgatgctcaaccttagacttctgacaag 19855197  T
Q  111 ccaaacaagcatagacaa 128  Q
     |||||| ||||| ||||    
T  19855198 tcaaacatgcatacacaa 19855215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 14932121 - 14932074
Alignment:
Q  134 catagctctaactaacttgccacataagcatgtaaaactgttatgaca 181  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||    
T  14932121 cataactcgaactaacttgccacataagcatgtacaactgttatgaca 14932074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 20835454 - 20835334
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| ||||||||| || ||||||||||||||||  ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||| ||||||||     
T  20835454 acaaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacatctgacaag 20835355  T
Q  111 ccaaacaagcatagacaaact 131  Q
     |||||| ||||| |||||||    
T  20835354 tcaaacatgcatacacaaact 20835334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 21749800 - 21749852
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 129  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  21749800 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaa 21749852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 37677873 - 37677993
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||||||||||||||||||||||||||  || |||   ||||||  || ||| || |  || |||||||| |||| ||| ||||||||||| |    
T  37677873 acaaaatccatagagatactatcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaga 37677972  T
Q  111 ccaaacaagcatagacaaact 131  Q
     |||||| ||||| |||||||    
T  37677973 tcaaacaggcataaacaaact 37677993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 20939629 - 20939511
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| ||||||||| |||  ||||||||||||||  ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||     
T  20939629 acaaaatccatagaaataaaatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaag 20939530  T
Q  111 ccaaacaagcatagacaaa 129  Q
     |||||| ||||| |||||    
T  20939529 tcaaacatgcatacacaaa 20939511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 22361744 - 22361690
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  22361744 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 22361690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 16078155 - 16078102
Alignment:
Q  78 gtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    |||||||||| |||||||||||||||||||| || ||||| | ||| |||||||    
T  16078155 gtttctgatgctcaatcttcgacttctgacagactaaacaggaatacacaaact 16078102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 98; Significance: 7e-48; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 453 - 574
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||    
T  453 ctccaacaaaatccatagaaatactatcccacttccactctggcacaaacaacggttgcatcaaactcgacggtctctgatgttcaatcttcgacttttg 552  T
Q  106 acaaaccaaacaagcatagaca 127  Q
    ||||||||||||||||||||||    
T  553 acaaaccaaacaagcatagaca 574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 96; Significance: 1e-46; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 24695 - 24810
Alignment:
Q  17 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 116  Q
    |||||||||||| ||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695 tccatagagatattatcccacttccactctggtacaaacaacgattgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 24794  T
Q  117 aagcatagacaaactc 132  Q
    ||||||| ||||||||    
T  24795 aagcatacacaaactc 24810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 232370 - 232486
Alignment:
Q  17 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 116  Q
    ||||||||||||||||||||||||||||  | ||||||||| ||||||||||||| |||||  || |||||||||||||| ||||||| |||||||||||    
T  232370 tccatagagatactatcccacttccactccgacacaaacaatggttgcatcaaactcgacgacttttgatgttcaatctttgacttctaacaaaccaaac 232469  T
Q  117 aagcatagacaaactct 133  Q
    ||||||| |||||||||    
T  232470 aagcatacacaaactct 232486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 95; Significance: 4e-46; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 27768 - 27642
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||    
T  27768 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctg 27669  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  27668 acaaaccaaacaagcataaacaaactc 27642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 1e-43; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 15292657 - 15292531
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  15292657 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgatggtctctgatgttcaatcttcgatttctg 15292558  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||| ||||    
T  15292557 acaaaccaaacaagcataaacatactc 15292531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 8 - 132
Target Start/End: Original strand, 13248420 - 13248544
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    |||||||  |||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||    
T  13248420 ccaacaaagtccatagaaatacaatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatattcaatcttcgatttctgac 13248519  T
Q  108 aaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||| ||||||||    
T  13248520 aaaccaaacaagcataaacaaactc 13248544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 8 - 132
Target Start/End: Original strand, 14998091 - 14998215
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    |||||||  |||||| | |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  14998091 ccaacaaagtccataaaaatactatctcacttccactttggcacaaacaacggttgcatccaacccgacggtctctgatgttcaatcttcgatttctgac 14998190  T
Q  108 aaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||| ||||||||    
T  14998191 aaaccaaacaagcataaacaaactc 14998215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 8 - 132
Target Start/End: Original strand, 9291610 - 9291734
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    |||||||  |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| || |||| ||    
T  9291610 ccaacaaagtccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttcttac 9291709  T
Q  108 aaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||| ||||||||    
T  9291710 aaaccaaacaagcataaacaaactc 9291734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 12342353 - 12342247
Alignment:
Q  16 atccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 115  Q
    |||||||||||| ||||||||||||||||  |||||||| |||| ||||||||||| ||| |  ||||||||||||||||||||||||||||||| ||||    
T  12342353 atccatagagatgctatcccacttccactccggcacaaaaaacgattgcatcaaactcga-gacttctgatgttcaatcttcgacttctgacaaatcaaa 12342255  T
Q  116 caagcata 123  Q
    ||||||||    
T  12342254 caagcata 12342247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 38811698 - 38811803
Alignment:
Q  24 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 123  Q
    |||||||||||||||| ||||  |||||||||| |||| |||||||||||  ||| |||||||||||||||||||| ||||||||||||||||||| |||    
T  38811698 agatactatcccactttcactcaggcacaaacagcggtcgcatcaaacccagcggcttctgatgttcaatcttcgatttctgacaaaccaaacaagtata 38811797  T
Q  124 gacaaa 129  Q
     |||||    
T  38811798 cacaaa 38811803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 16028905 - 16029010
Alignment:
Q  27 tactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagac 126  Q
    |||||||| ||||||| |  |||||||| || ||||||| ||||||||||   |||||||||| ||| ||||||||||||||||||||||||||||| |     
T  16028905 tactatcctacttccagtcaggcacaaa-aatggttgcaacaaacccgacaacttctgatgttaaattttcgacttctgacaaaccaaacaagcatacat 16029003  T
Q  127 aaactct 133  Q
    |||||||    
T  16029004 aaactct 16029010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 20891765 - 20891880
Alignment:
Q  16 atccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 115  Q
    ||||||||||||||| |||||||||||||  || |||  |||||||  |||||| || |  || |||||||| |||| ||| ||||||||||||| |||     
T  20891765 atccatagagatactgtcccacttccactccggtacatccaacggtgtcatcaaccctgtaggcttctgatgctcaaccttggacttctgacaaatcaag 20891864  T
Q  116 caagcatagacaaact 131  Q
    |||||||| |||||||    
T  20891865 caagcataaacaaact 20891880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 115
Target Start/End: Complemental strand, 15147053 - 15147015
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15147053 ggtttctgatgttcaatcttcgacttctgacaaaccaaa 15147015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 18226614 - 18226560
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  18226614 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 18226560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 15078482 - 15078533
Alignment:
Q  80 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||||| ||| ||||||||||||| |||||| ||||| |||||||    
T  15078482 ttctgatgttcaaccttagacttctgacaaatcaaacatgcataaacaaact 15078533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 111
Target Start/End: Complemental strand, 16354613 - 16354579
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaac 111  Q
    |||||||||||||||||||||||||| ||||||||    
T  16354613 ggtttctgatgttcaatcttcgacttgtgacaaac 16354579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 12524520 - 12524573
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 130  Q
    ||||||||||| ||||  ||||||||||||||||||||||| | ||| ||||||    
T  12524520 ggtttctgatgctcaactttcgacttctgacaaaccaaacaggaatacacaaac 12524573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 44661360 - 44661327
Alignment:
Q  11 acaatatccatagagatactatcccacttccact 44  Q
    |||| |||||||||||||||||||||||||||||    
T  44661360 acaaaatccatagagatactatcccacttccact 44661327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 90; Significance: 4e-43; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 551 - 430
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| || | |||||    
T  551 acaaaatccatagagatactatcccactttcactctggcacaaacaagggttgcatcaaacccgacggtttctgatgttcaatcttcgattttttacaaa 452  T
Q  111 ccaaacaagcatagacaaactc 132  Q
    ||||||||||||| ||||||||    
T  451 ccaaacaagcatatacaaactc 430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 89; Significance: 2e-42; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 8 - 132
Target Start/End: Original strand, 13714 - 13838
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    |||||||  |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| | |||||||||||| |||||||    
T  13714 ccaacaaagtccatagaaatactatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgttattcaatcttcgatttctgac 13813  T
Q  108 aaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||| ||||||||    
T  13814 aaaccaaacaagcataaacaaactc 13838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 89; Significance: 2e-42; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 8 - 132
Target Start/End: Original strand, 46960 - 47084
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    |||||||  |||||||| || ||||||||||||||||  |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  46960 ccaacaaagtccatagaaatgctatcccacttccactcaggcacaaacaacggttgcatgaaacccgacggtctctgatgttcaatcttcgacttctgac 47059  T
Q  108 aaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||| ||||||||    
T  47060 aaaccaaacaagcataaacaaactc 47084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 88; Significance: 6e-42; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 6 - 133
Target Start/End: Complemental strand, 14239 - 14112
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||  |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||| || ||||     
T  14239 ctccaacaaagtccatagaaatactatcccacttccactctggcacaaacaacgtttgcatcaaacccgacggtctctgatgttcaatctttgatttcta 14140  T
Q  106 acaaaccaaacaagcatagacaaactct 133  Q
    |||||||||||||||||| |||||||||    
T  14139 acaaaccaaacaagcataaacaaactct 14112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 88; Significance: 6e-42; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 180739 - 180854
Alignment:
Q  17 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 116  Q
    |||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  180739 tccatagaaatgttatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaac 180838  T
Q  117 aagcatagacaaactc 132  Q
    ||||||| ||||||||    
T  180839 aagcataaacaaactc 180854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 195201 - 195083
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| ||||||||| || |||||| |||||||||  ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||     
T  195201 acaaaatccatagaaatgctatccaacttccactccggcacatccaacggtgtcaacaaccctgtaggcttctgatgttcaaccttagacttctgacaag 195102  T
Q  111 ccaaacaagcatagacaaa 129  Q
     |||||| ||||| |||||    
T  195101 tcaaacatgcatacacaaa 195083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 9790 - 9916
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||||||| |||| |||||||||| |||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||     
T  9790 ctccaacaaaatccatagagatattatctcacttccactctggcacaaacaatggttgcatcaaacccgacggttttttatgttcaatcttcgatttcta 9889  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  9890 acaaaccaaacaagcataaacaaactc 9916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 3966 - 4088
Alignment:
Q  10 aacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 109  Q
    ||||| ||||||||| || |||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  3966 aacaaaatccatagaaatgctatcccacttccactctggcacgaacaacggttgcatcaaacctgacggtttctgatgttcaatcttcgacttcggacaa 4065  T
Q  110 accaaacaagcatagacaaactc 132  Q
    |||| ||||||||| ||||||||    
T  4066 accagacaagcatatacaaactc 4088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 5979 - 6105
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||  |||||||| || |||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||    
T  5979 ctccaacaaagtccatagaaatgctatcccacttccactctggaacaaacaacggttgcatcaaacccgacggtctctaatgttcaatcttcgatttctg 6078  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  6079 acaaaccaaacaagcataaacaaactc 6105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 18851 - 18977
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||  |||||||| ||||||||||||||||||| |||||||||||||||||||||||||| | | ||| ||||||||||||||||||| |||||    
T  18851 ctccaacaaagtccatagaaatactatcccacttccactctggcacaaacaacggttgcatcaaacacaaaggtctctgatgttcaatcttcgatttctg 18950  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  18951 acaaaccaaacaagcataaacaaactc 18977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 86; Significance: 1e-40; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 924 - 803
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    ||||||| ||||||||| || |||||||||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||    
T  924 ccaacaaaatccatagaaatgctatcccacttccactctggtacaaacaacaattgcatcaaacccgacggtttctgatgttcattcttcgacttctgac 825  T
Q  108 aaaccaaacaagcatagacaaa 129  Q
    |||||||||||||||| |||||    
T  824 aaaccaaacaagcataaacaaa 803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 86; Significance: 1e-40; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 106074 - 105949
Alignment:
Q  7 tccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 106  Q
    ||||||||  |||||||| || || ||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||    
T  106074 tccaacaaagtccatagaaatgctttcccacttccactctggcacaaacaacggttgcatcaaacccgacagtctctgatgttcaatcttcgatttctga 105975  T
Q  107 caaaccaaacaagcatagacaaactc 132  Q
    ||||||||||||||||| ||||||||    
T  105974 caaaccaaacaagcatatacaaactc 105949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 85; Significance: 4e-40; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 8 - 132
Target Start/End: Complemental strand, 9361 - 9237
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    |||||||  |||||||| || |||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||    
T  9361 ccaacaaagtccatagaaatgctatcccacttccattctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctaac 9262  T
Q  108 aaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||| ||||||||    
T  9261 aaaccaaacaagcataaacaaactc 9237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 8069 - 8192
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| || ||||||||| || ||    
T  8069 ctccaacaaaatctatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacctaacggtttctgatatttaatcttcgatttttg 8168  T
Q  106 acaaaccaaacaagcatagacaaa 129  Q
    |||||| ||||||||||| |||||    
T  8169 acaaacaaaacaagcataaacaaa 8192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 83; Significance: 6e-39; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 266 - 392
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    ||||||||| ||||||||| || ||||||||  |||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  266 ctccaacaaaatccatagaaatgctatcccaaatccactctggaacaaacaacggttgcatcaaacccgatggtctctgatgttcaatcttcgatttctg 365  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||||| ||||||||    
T  366 acaaaccaaacaagcataaacaaactc 392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 83; Significance: 6e-39; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 45312 - 45418
Alignment:
Q  17 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 116  Q
    |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  45312 tccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttaaatcttcgatttctgacaaaccaaac 45411  T
Q  117 aagcata 123  Q
    |||||||    
T  45412 aagcata 45418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 8 - 133
Target Start/End: Original strand, 296 - 421
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    ||||||| ||||||||| ||  ||||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  296 ccaacaaaatccatagatatgttatcccacttccgttctagcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttccaac 395  T
Q  108 aaaccaaacaagcatagacaaactct 133  Q
    |||||||||||||||| |||||||||    
T  396 aaaccaaacaagcataaacaaactct 421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 80; Significance: 4e-37; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 3357 - 3472
Alignment:
Q  17 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 116  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| || || ||||||| |||||    
T  3357 tccatagaaatattatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttttgacaaagcaaac 3456  T
Q  117 aagcatagacaaactc 132  Q
    ||||||| ||||||||    
T  3457 aagcataaacaaactc 3472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 80; Significance: 4e-37; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 10 - 129
Target Start/End: Original strand, 7977 - 8096
Alignment:
Q  10 aacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 109  Q
    ||||| || |||||||||| ||||||||||||||| |||||||||||||| |||||||||||| |||||| | |||||||||||||||||||| ||||||    
T  7977 aacaaaattcatagagatattatcccacttccactctggcacaaacaacgattgcatcaaacctgacggtctatgatgttcaatcttcgacttatgacaa 8076  T
Q  110 accaaacaagcatagacaaa 129  Q
    |||||||||||||| |||||    
T  8077 accaaacaagcataaacaaa 8096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 80; Significance: 4e-37; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 15462 - 15585
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    |||||||  |||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |||||||    
T  15462 ccaacaaattccatagaaatgttatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgataaatcttcgatttctgac 15561  T
Q  108 aaaccaaacaagcatagacaaact 131  Q
    |||||||||||||||| |||||||    
T  15562 aaaccaaacaagcataaacaaact 15585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 44342 - 44408
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacc 72  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||    
T  44342 ctccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacc 44408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 80; Significance: 4e-37; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 55391 - 55276
Alignment:
Q  17 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 116  Q
    |||||||| || |||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||    
T  55391 tccatagaaatgctatcccacttccattctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcaatttctgacaaaccaaac 55292  T
Q  117 aagcatagacaaactc 132  Q
    ||||||| | ||||||    
T  55291 aagcataaaaaaactc 55276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 28869 - 28749
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  28869 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcgggtttctgatgttcaatcttcgacttctgacaaa 28770  T
Q  111 ccaaacaagcatagacaaact 131  Q
    ||||||| | ||| |||||||    
T  28769 ccaaacaggaatacacaaact 28749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 132
Target Start/End: Complemental strand, 3444 - 3320
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    |||||||  |||||||| || ||||||||||||||||  ||||||||||||||||||||||||| || |||| |||||| |||||||||||| |||||||    
T  3444 ccaacaaagtccatagaaatgctatcccacttccactccggcacaaacaacggttgcatcaaactcgtcggtctctgattttcaatcttcgatttctgac 3345  T
Q  108 aaaccaaacaagcatagacaaactc 132  Q
    |||||||||||||||| ||||||||    
T  3344 aaaccaaacaagcataaacaaactc 3320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 7311 - 7184
Alignment:
Q  6 ctccaacaatatccatagagatactat-cccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttct 104  Q
    ||||||||| |||||| || || |||| |||| |||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||    
T  7311 ctccaacaaaatccatggaaatgctatacccatttccactttggcacaaacaacggttgcatcaaacccgatggtctttgatgttcaatcttcgatttct 7212  T
Q  105 gacaaaccaaacaagcatagacaaactc 132  Q
    |||||||||| ||| |||| ||||||||    
T  7211 gacaaaccaagcaaacataaacaaactc 7184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 13007 - 13125
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| ||||||||| || ||||||||||||||||  ||||||  |||||||  || ||| || |  || ||||||||||||| ||| |||||| |||||     
T  13007 acaaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttcagacaag 13106  T
Q  111 ccaaacaagcatagacaaa 129  Q
     |||||| ||||| |||||    
T  13107 tcaaacatgcatacacaaa 13125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 71; Significance: 9e-32; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 8392 - 8266
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||||||||  |||||||| || || ||| ||||||||| | |||||||||||||||| |||||||||| |||||||| |||||||||||| ||||||||    
T  8392 ctccaacaaagtccatagaaatgctgtccaacttccactctagcacaaacaacggttgtatcaaacccggcggtttctaatgttcaatctttgacttctg 8293  T
Q  106 acaaaccaaacaagcatagacaaactc 132  Q
    || ||||||||||||||| ||||||||    
T  8292 acgaaccaaacaagcataaacaaactc 8266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 14941 - 15028
Alignment:
Q  5 tctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaa 92  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  14941 tctccaacaaaatccatagagatatgatcccacttccactttggcacaaacaatggttgcatcaaacctgacggtttctgatgttcaa 15028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 66; Significance: 9e-29; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 26612 - 26733
Alignment:
Q  8 ccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 107  Q
    |||||||  |||||||| ||  ||||||||||||| | ||||||||||||||||||||||||||||||  || ||||||||||||||||||| |||| ||    
T  26612 ccaacaaagtccatagaaatgttatcccacttccattctggcacaaacaacggttgcatcaaacccgatagtctctgatgttcaatcttcgatttcttac 26711  T
Q  108 aaaccaaacaagcatagacaaa 129  Q
    |||||||| ||||||| |||||    
T  26712 aaaccaaataagcataaacaaa 26733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 75406 - 75487
Alignment:
Q  50 acaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||| ||||| ||||||| |||||||||||| |||||||    
T  75406 acaaacaacggttgcatccaacccgatggcttctgatgttcaatcttagacttttgacaaagcaaacaagcatatacaaact 75487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 9569 - 9444
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 105  Q
    |||| |||| |||||||||| || |||| |||||| |||  || ||||||||| ||| |||||||   ||||| ||||| || |||||||||||||| ||    
T  9569 ctccgacaaaatccatagagttattatctcacttctactcaggtacaaacaacagttacatcaaatatgacggcttctgctgctcaatcttcgacttttg 9470  T
Q  106 acaaaccaaacaagcatagacaaact 131  Q
    |||||||||||||||||| |||||||    
T  9469 acaaaccaaacaagcatacacaaact 9444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 19477 - 19531
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  19477 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaact 19531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 34901 - 34955
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  34901 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaact 34955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 39317 - 39211
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| ||||||| |||||||   || | |  ||||||||| |  ||||||||||||||||||||||||||||||||||    
T  39317 acaaaatccatggatatactatcccatttccactctggcacatctaaggataccatcaaaccagcgggtttctgatgttcaatcttcgacttctgacaaa 39218  T
Q  111 ccaaaca 117  Q
    | |||||    
T  39217 ctaaaca 39211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 196909 - 196855
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  196909 ggtttctgatgctcaatcttcgacttctgacaaaccaaacaagaatacacaaact 196855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 3003 - 3123
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  |||||||||||||||||| |||||||||||||||    
T  3003 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcgtcgacttctgacaaa 3102  T
Q  111 ccaaacaagcatagacaaact 131  Q
    ||||||| | ||| |||||||    
T  3103 ccaaacaggaatacacaaact 3123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 24307 - 24427
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  |||||||||||||||||| |||||||||||||||    
T  24307 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcatcgacttctgacaaa 24406  T
Q  111 ccaaacaagcatagacaaact 131  Q
    ||||||| | ||| |||||||    
T  24407 ccaaacaggaatacacaaact 24427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 14848 - 14968
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| ||||||| |||||||   |||| |  ||||| ||| |  ||||||||||| |||| ||||||||||| |||||    
T  14848 acaaaatccatggatatactatcccatttccactctggcacatctaacgataccatcataccagcaggtttctgatgctcaaccttcgacttctaacaaa 14947  T
Q  111 ccaaacaagcatagacaaact 131  Q
     |||||||||||| |||||||    
T  14948 tcaaacaagcatacacaaact 14968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 181008 - 181128
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  |||||||||||||| |||||||||||||||||||    
T  181008 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcgatcttcgacttctgacaaa 181107  T
Q  111 ccaaacaagcatagacaaact 131  Q
    ||||||| | ||| |||||||    
T  181108 ccaaacaggaatacacaaact 181128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 101049 - 100929
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| ||||||||| ||| | |||||||||||||  || |||  |||||||  || ||| || |  || ||||||||||||| ||| |||||||||||||    
T  101049 acaaaatccatagaaatattgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaaa 100950  T
Q  111 ccaaacaagcatagacaaact 131  Q
     |||||| ||||| |||||||    
T  100949 tcaaacacgcatacacaaact 100929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 278261 - 278221
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 117  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  278261 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 278221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 19433 - 19380
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 130  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||||| ||||||    
T  19433 ggtttctgatgctcaatcttcgacttctggcaaatcaaacaagcatacacaaac 19380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 6823 - 6943
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  |||||||||||||||| ||||||||| |||||||    
T  6823 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaaccttcgacttatgacaaa 6922  T
Q  111 ccaaacaagcatagacaaact 131  Q
     |||||||| ||| |||||||    
T  6923 tcaaacaagaatacacaaact 6943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 229918 - 229970
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 129  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| ||| |||||    
T  229918 ggtttctgatgctcaattttcgacttctgacaaaccaaacaagaatacacaaa 229970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1710 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1710
Description:

Target: scaffold1710; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 673 - 791
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| ||||||||| ||  |||||||||||||||| ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||     
T  673 acaaaatccatagaaatgttatcccacttccacttcggcacatccaacggtgacaacaaccctgcaggcttctgatgttcaaccttagacttctgacaag 772  T
Q  111 ccaaacaagcatagacaaa 129  Q
     |||||| ||||| |||||    
T  773 tcaaacatgcatacacaaa 791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 3836 - 3782
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| |||||||| |||||||||||||||||||| | ||| |||||||    
T  3836 ggtttctgatgctcaatctttgacttctgacaaaccaaacaggaatacacaaact 3782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 7762 - 7708
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    |||||||||||||||| ||||||||||| ||||| |||||||| ||| |||||||    
T  7762 ggtttctgatgttcaaccttcgacttctaacaaatcaaacaagaatacacaaact 7708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 119
Target Start/End: Complemental strand, 3245 - 3203
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaag 119  Q
    ||||||||| ||||| |||||||||||||||||||||||||||    
T  3245 ggtttctgacgttcagtcttcgacttctgacaaaccaaacaag 3203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 13343 - 13397
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  13343 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 13397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 3422 - 3364
Alignment:
Q  5 tctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttg 63  Q
    |||||||||| ||||||| | ||||||||| |||||||||  |||||||||||||||||    
T  3422 tctccaacaaaatccatatatatactatcctacttccactccggcacaaacaacggttg 3364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 9471 - 9525
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| |||||||| |||||||||||||||||||| | ||| |||||||    
T  9471 ggtttctgatgctcaatctttgacttctgacaaaccaaacaggaatacacaaact 9525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 33004 - 32950
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| |||||||| ||| |||||||||||||||| | ||| |||||||    
T  33004 ggtttctgatgctcaatctttgacctctgacaaaccaaacaggaatacacaaact 32950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 15235 - 15289
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  15235 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 15289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 63462 - 63408
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||| |||||||||||||||||||||||||||| |||| | ||| |||||||    
T  63462 ggtttcttatgttcaatcttcgacttctgacaaacctaacaggaatacacaaact 63408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 27075 - 27188
Alignment:
Q  16 atccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 115  Q
    ||||||||||||||| |||||||||||||  || |||   ||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||| ||||    
T  27075 atccatagagatactgtcccacttccactacggtacatcaaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaatcaaa 27174  T
Q  116 caagcatagacaaa 129  Q
    |||||||| |||||    
T  27175 caagcataaacaaa 27188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 9779 - 9899
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||| | ||||||| |||||||   ||||||  |||||| || |  ||||| ||||| |||| ||| |||||||||||||    
T  9779 acaaaatccatggatatactatcctatttccactctggcacatctaacggtgtcatcaaccctgcaggtttttgatgctcaacctttgacttctgacaaa 9878  T
Q  111 ccaaacaagcatagacaaact 131  Q
     |||||||| ||| |||||||    
T  9879 tcaaacaagaatacacaaact 9899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 6858 - 6978
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| |||||| || ||||||||||| |||||||  ||||||   |||| |  ||||| ||| |  ||||||||||| |||| |||||||||||||||||    
T  6858 acaaaatccatggatatactatcccatttccactcaggcacatctaacgataccatcataccagcaggtttctgatgctcaaccttcgacttctgacaaa 6957  T
Q  111 ccaaacaagcatagacaaact 131  Q
     ||| |||| ||| |||||||    
T  6958 tcaagcaagaatacacaaact 6978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 571 - 623
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 129  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  571 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaa 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 29820 - 29876
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaactct 133  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||||    
T  29820 ggtttctgatggtcaaccttcgatttctgacaaatcaaacaagaatacacaaactct 29876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2094 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold2094
Description:

Target: scaffold2094; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 490 - 439
Alignment:
Q  80 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||||| ||| ||||||||||||| |||||| ||||| |||||||    
T  490 ttctgatgttcaaccttagacttctgacaaatcaaacatgcatatacaaact 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 1498 - 1444
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| |||||||    
T  1498 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaact 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 2342 - 2396
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| |||| ||||||||| ||||||| |||||||| ||| |||||||    
T  2342 ggtttctgatgctcaaccttcgacttttgacaaatcaaacaagaatacacaaact 2396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 16530 - 16584
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| |||||||    
T  16530 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaact 16584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 11430 - 11496
Alignment:
Q  6 ctccaacaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacc 72  Q
    |||| |||| |||||||||||||||||| |||||||||   | |||||||||| ||| |||||||||    
T  11430 ctccgacaaaatccatagagatactatctcacttccaccccgacacaaacaacagttacatcaaacc 11496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 11554 - 11436
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| ||||||||| || ||||||||||||||||  ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||| ||||||     
T  11554 acaaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttttgacaag 11455  T
Q  111 ccaaacaagcatagacaaa 129  Q
     |||||| ||||| |||||    
T  11454 tcaaacatgcatacacaaa 11436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 15324 - 15206
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| ||||||||| || ||||||||||||||||  ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||| ||||||     
T  15324 acaaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttttgacaag 15225  T
Q  111 ccaaacaagcatagacaaa 129  Q
     |||||| ||||| |||||    
T  15224 tcaaacatgcatacacaaa 15206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 22742 - 22796
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| |||||||| |||||||||||||| ||||| | ||| |||||||    
T  22742 ggtttctgatgctcaatctttgacttctgacaaactaaacaggaatatacaaact 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 111
Target Start/End: Original strand, 25849 - 25883
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaac 111  Q
    |||||||||||||||||||||||||| ||||||||    
T  25849 ggtttctgatgttcaatcttcgacttgtgacaaac 25883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 4450 - 4332
Alignment:
Q  11 acaatatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 110  Q
    |||| ||||||||| || ||||||||||||||||  ||||||  |||||||  || ||| || |  || || |||||||||| ||| ||||||||||||     
T  4450 acaaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttttgatgttcaaccttagacttctgacaag 4351  T
Q  111 ccaaacaagcatagacaaa 129  Q
     |||||| ||||| |||||    
T  4350 tcaaacacgcatacacaaa 4332  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 390631 - 390577
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 131  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| |||||||    
T  390631 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaact 390577  T

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Target: scaffold1355 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1355
Description:

Target: scaffold1355; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 1551 - 1604
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 130  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| ||||||    
T  1551 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaac 1604  T

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Target: scaffold0145 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 39442 - 39389
Alignment:
Q  77 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 130  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| ||||||    
T  39442 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaac 39389  T

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