View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1305_high_81 (Length: 252)

Name: NF1305_high_81
Description: NF1305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1305_high_81
NF1305_high_81
[»] chr2 (24 HSPs)
chr2 (16-172)||(39230806-39230962)
chr2 (16-121)||(13029125-13029230)
chr2 (16-121)||(21198155-21198260)
chr2 (16-121)||(40737800-40737905)
chr2 (16-121)||(34726344-34726449)
chr2 (65-121)||(36985448-36985504)
chr2 (19-121)||(2995065-2995167)
chr2 (65-121)||(6431516-6431572)
chr2 (65-121)||(29044105-29044161)
chr2 (16-121)||(29557415-29557520)
chr2 (16-121)||(12033844-12033948)
chr2 (30-113)||(6419990-6420073)
chr2 (16-123)||(32084133-32084240)
chr2 (16-95)||(38213422-38213501)
chr2 (65-123)||(38448100-38448158)
chr2 (19-121)||(2182741-2182843)
chr2 (19-121)||(26260288-26260390)
chr2 (65-121)||(29768290-29768346)
chr2 (65-121)||(35959329-35959385)
chr2 (19-122)||(44092830-44092933)
chr2 (65-121)||(6283332-6283388)
chr2 (62-128)||(17852815-17852881)
chr2 (65-123)||(43616303-43616361)
chr2 (16-48)||(43999652-43999684)
[»] chr3 (35 HSPs)
chr3 (16-121)||(20647816-20647921)
chr3 (16-121)||(34705330-34705435)
chr3 (16-121)||(47597105-47597210)
chr3 (16-122)||(19420961-19421067)
chr3 (16-121)||(29076864-29076969)
chr3 (16-121)||(33249412-33249517)
chr3 (16-121)||(39391050-39391155)
chr3 (16-121)||(40000800-40000905)
chr3 (16-121)||(1782705-1782810)
chr3 (16-121)||(13596161-13596266)
chr3 (16-121)||(24540997-24541102)
chr3 (16-121)||(28793648-28793753)
chr3 (65-124)||(39889318-39889377)
chr3 (65-123)||(4357092-4357150)
chr3 (67-121)||(9338332-9338386)
chr3 (19-122)||(51302360-51302463)
chr3 (65-122)||(4481648-4481705)
chr3 (16-94)||(34636364-34636442)
chr3 (65-121)||(33069493-33069549)
chr3 (65-121)||(41636283-41636339)
chr3 (19-115)||(25593695-25593791)
chr3 (69-124)||(40489119-40489174)
chr3 (19-95)||(42294135-42294211)
chr3 (16-91)||(47844525-47844600)
chr3 (65-122)||(22523398-22523455)
chr3 (65-121)||(26994829-26994885)
chr3 (16-81)||(46116457-46116522)
chr3 (16-93)||(53002183-53002260)
chr3 (69-121)||(54447581-54447633)
chr3 (19-95)||(24133782-24133858)
chr3 (65-95)||(2222152-2222182)
chr3 (65-122)||(36672864-36672919)
chr3 (65-95)||(41129791-41129821)
chr3 (79-124)||(33910153-33910198)
chr3 (65-121)||(7046805-7046861)
[»] chr7 (29 HSPs)
chr7 (19-122)||(41902860-41902963)
chr7 (16-121)||(11410521-11410626)
chr7 (16-121)||(14776202-14776307)
chr7 (16-121)||(15943138-15943243)
chr7 (16-123)||(2732288-2732395)
chr7 (16-123)||(3356958-3357065)
chr7 (65-122)||(21806499-21806556)
chr7 (20-124)||(2941152-2941256)
chr7 (20-115)||(13391060-13391155)
chr7 (18-121)||(41892123-41892226)
chr7 (16-121)||(1411541-1411646)
chr7 (18-115)||(12419174-12419271)
chr7 (65-121)||(15757713-15757769)
chr7 (16-121)||(34521263-34521368)
chr7 (66-121)||(36820936-36820991)
chr7 (65-121)||(2196044-2196100)
chr7 (65-121)||(31377365-31377421)
chr7 (65-121)||(44848016-44848072)
chr7 (16-103)||(31249413-31249500)
chr7 (65-115)||(43596243-43596293)
chr7 (62-95)||(32584844-32584877)
chr7 (65-122)||(41399779-41399835)
chr7 (65-121)||(10227858-10227914)
chr7 (65-95)||(8485977-8486007)
chr7 (65-95)||(18533432-18533462)
chr7 (62-115)||(34002839-34002892)
chr7 (66-122)||(12077200-12077256)
chr7 (65-121)||(23671214-23671270)
chr7 (65-121)||(46191736-46191792)
[»] chr1 (38 HSPs)
chr1 (16-123)||(24038239-24038346)
chr1 (19-121)||(19507057-19507159)
chr1 (16-121)||(18353088-18353193)
chr1 (16-121)||(19708992-19709097)
chr1 (16-123)||(33785192-33785299)
chr1 (16-121)||(17805813-17805918)
chr1 (16-121)||(39860481-39860586)
chr1 (16-121)||(52222725-52222830)
chr1 (16-115)||(8417233-8417332)
chr1 (65-121)||(5500028-5500084)
chr1 (18-95)||(13253270-13253347)
chr1 (65-121)||(39919604-39919660)
chr1 (65-123)||(23555743-23555801)
chr1 (16-95)||(46846784-46846863)
chr1 (65-121)||(6889577-6889633)
chr1 (65-121)||(6891423-6891479)
chr1 (65-121)||(10805017-10805073)
chr1 (65-121)||(15321966-15322022)
chr1 (66-121)||(6305024-6305079)
chr1 (62-121)||(10311990-10312049)
chr1 (66-121)||(16452385-16452440)
chr1 (66-121)||(16461537-16461592)
chr1 (19-122)||(18342557-18342660)
chr1 (66-120)||(44779546-44779600)
chr1 (16-113)||(32239307-32239404)
chr1 (16-113)||(34083977-34084074)
chr1 (65-121)||(44912597-44912653)
chr1 (16-121)||(50097061-50097166)
chr1 (65-120)||(15849814-15849869)
chr1 (66-121)||(26257390-26257445)
chr1 (68-115)||(45372816-45372863)
chr1 (65-95)||(7109651-7109681)
chr1 (19-122)||(13077293-13077396)
chr1 (65-95)||(31493510-31493540)
chr1 (66-95)||(5506939-5506968)
chr1 (65-122)||(12298133-12298190)
chr1 (65-121)||(34050077-34050133)
chr1 (65-121)||(42650104-42650160)
[»] scaffold0129 (1 HSPs)
scaffold0129 (16-122)||(40899-41005)
[»] chr5 (23 HSPs)
chr5 (19-121)||(11877462-11877564)
chr5 (16-121)||(9163428-9163533)
chr5 (19-123)||(18158376-18158480)
chr5 (16-123)||(6644176-6644283)
chr5 (16-121)||(42062325-42062430)
chr5 (65-123)||(10017761-10017819)
chr5 (19-121)||(38254693-38254795)
chr5 (19-121)||(40083983-40084085)
chr5 (16-124)||(12880455-12880564)
chr5 (65-121)||(14949592-14949648)
chr5 (16-121)||(31271452-31271557)
chr5 (17-121)||(12724947-12725051)
chr5 (65-123)||(491251-491309)
chr5 (16-115)||(4101183-4101282)
chr5 (16-121)||(7078990-7079095)
chr5 (65-121)||(27332565-27332621)
chr5 (65-115)||(15397563-15397613)
chr5 (73-112)||(31624131-31624170)
chr5 (71-113)||(370164-370206)
chr5 (65-115)||(12786478-12786528)
chr5 (65-95)||(17870109-17870139)
chr5 (65-95)||(27054565-27054595)
chr5 (62-95)||(31624169-31624202)
[»] chr8 (28 HSPs)
chr8 (16-121)||(26241267-26241372)
chr8 (16-123)||(11989027-11989134)
chr8 (16-121)||(36684672-36684777)
chr8 (16-115)||(23950294-23950393)
chr8 (65-123)||(44755542-44755600)
chr8 (19-121)||(14921366-14921468)
chr8 (65-121)||(7383239-7383295)
chr8 (65-121)||(12637985-12638041)
chr8 (65-121)||(32551641-32551697)
chr8 (65-121)||(38600895-38600951)
chr8 (66-121)||(16383970-16384025)
chr8 (19-123)||(40680347-40680451)
chr8 (19-121)||(32983223-32983325)
chr8 (65-121)||(24580441-24580497)
chr8 (16-121)||(36054662-36054767)
chr8 (65-121)||(44710077-44710133)
chr8 (66-125)||(32415404-32415463)
chr8 (19-95)||(33303803-33303879)
chr8 (65-122)||(35056178-35056235)
chr8 (16-121)||(7323210-7323315)
chr8 (65-121)||(16365049-16365105)
chr8 (65-121)||(26106378-26106434)
chr8 (65-121)||(39506697-39506753)
chr8 (19-93)||(8000044-8000118)
chr8 (65-94)||(23444423-23444452)
chr8 (65-121)||(7960628-7960684)
chr8 (65-121)||(10921068-10921124)
chr8 (16-48)||(32415385-32415417)
[»] chr6 (18 HSPs)
chr6 (16-121)||(3027303-3027408)
chr6 (16-121)||(13276560-13276665)
chr6 (16-121)||(28890927-28891032)
chr6 (62-121)||(4174283-4174342)
chr6 (65-115)||(479247-479297)
chr6 (16-121)||(4111403-4111508)
chr6 (65-123)||(33042780-33042838)
chr6 (19-121)||(1101188-1101290)
chr6 (65-121)||(1558606-1558662)
chr6 (65-121)||(3729120-3729176)
chr6 (16-121)||(8437591-8437696)
chr6 (19-121)||(32187306-32187408)
chr6 (16-121)||(5153316-5153421)
chr6 (16-95)||(24011957-24012036)
chr6 (16-115)||(31803135-31803234)
chr6 (65-121)||(13041763-13041819)
chr6 (65-104)||(4229899-4229938)
chr6 (66-95)||(23645885-23645914)
[»] chr4 (32 HSPs)
chr4 (16-121)||(38308092-38308197)
chr4 (16-121)||(40730457-40730562)
chr4 (16-121)||(48826000-48826105)
chr4 (16-121)||(8753806-8753911)
chr4 (16-121)||(9627486-9627591)
chr4 (19-121)||(17981321-17981423)
chr4 (19-121)||(29590493-29590595)
chr4 (65-121)||(3097932-3097988)
chr4 (16-121)||(10010887-10010992)
chr4 (16-121)||(10018028-10018133)
chr4 (65-121)||(11845423-11845479)
chr4 (16-121)||(48089811-48089916)
chr4 (16-95)||(20039674-20039753)
chr4 (16-95)||(41487475-41487554)
chr4 (65-121)||(4422060-4422116)
chr4 (65-121)||(22270465-22270521)
chr4 (65-121)||(36488771-36488827)
chr4 (66-121)||(40412838-40412893)
chr4 (16-122)||(16711742-16711848)
chr4 (66-123)||(32212215-32212272)
chr4 (65-121)||(517548-517604)
chr4 (65-121)||(25040256-25040312)
chr4 (65-121)||(31842846-31842902)
chr4 (65-121)||(37011052-37011108)
chr4 (65-121)||(48659320-48659376)
chr4 (62-121)||(5258756-5258815)
chr4 (62-101)||(35041842-35041881)
chr4 (65-123)||(50637248-50637306)
chr4 (66-111)||(20392995-20393040)
chr4 (66-103)||(45783937-45783974)
chr4 (65-122)||(46903961-46904018)
chr4 (65-121)||(12582099-12582155)
[»] scaffold0275 (1 HSPs)
scaffold0275 (62-121)||(9151-9210)
[»] scaffold0037 (1 HSPs)
scaffold0037 (16-121)||(81359-81464)
[»] scaffold0065 (1 HSPs)
scaffold0065 (16-123)||(39972-40079)
[»] scaffold0067 (1 HSPs)
scaffold0067 (16-122)||(14358-14464)
[»] scaffold0422 (1 HSPs)
scaffold0422 (67-121)||(10638-10692)
[»] scaffold0288 (1 HSPs)
scaffold0288 (62-115)||(7154-7207)
[»] scaffold1702 (1 HSPs)
scaffold1702 (69-121)||(1-53)
[»] scaffold1625 (1 HSPs)
scaffold1625 (13-121)||(1216-1319)
[»] scaffold0259 (1 HSPs)
scaffold0259 (66-121)||(24808-24863)
[»] scaffold0886 (1 HSPs)
scaffold0886 (65-95)||(1855-1885)


Alignment Details
Target: chr2 (Bit Score: 104; Significance: 6e-52; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 39230962 - 39230806
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||| |||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||| |||||| |||||| |||||| | ||    
T  39230962 ataggtctatgaagggccataggtcaggctcagacttgcaaaaaaatttgttggccaggctcaggcctatcaaaacctggtctggccttacctatcctca 39230863  T
Q  116 tccctagtagggaccaacttgttcctttttaaagtaccgtcgagaattaaattattc 172  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39230862 tctctagtagggaccaacttgttcctttttaaagtaccgtcgagaattaaattattc 39230806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 13029125 - 13029230
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  13029125 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 13029224  T
Q  116 tcccta 121  Q
     |||||    
T  13029225 acccta 13029230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 21198155 - 21198260
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  21198155 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 21198254  T
Q  116 tcccta 121  Q
     |||||    
T  21198255 acccta 21198260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 40737905 - 40737800
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  40737905 ataggcctatgaaaggccataggccaggctcaggcctgcaaaaaatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 40737806  T
Q  116 tcccta 121  Q
     |||||    
T  40737805 acccta 40737800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 34726344 - 34726449
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | ||        || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  34726344 ataggcctatgaaaggccataggccaggctcaggcctgtaaaatttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 34726443  T
Q  116 tcccta 121  Q
     |||||    
T  34726444 acccta 34726449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 36985448 - 36985504
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  36985448 gtaggccaggctcaggcctatcaaagcctggtctggcctggcctattcccaacccta 36985504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 2995065 - 2995167
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||||||||| ||||||||| ||||        || |||||||||||||||||||||||||| ||||| ||||||| |||||||||| ||    
T  2995065 ggcctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagtctggtctggcctggcctattcccaccc 2995164  T
Q  119 cta 121  Q
    |||    
T  2995165 cta 2995167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 6431572 - 6431516
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||||| |||||    
T  6431572 gtaggccaggctcaggcctatcaaagcctggcctgacctgacctattcccaccccta 6431516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 29044161 - 29044105
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||| |||||    
T  29044161 gtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 29044105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 29557520 - 29557415
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| |||||||||  |||||||| | |||       || |||||||||||||||||||||||||||||| | ||||||| ||||||| ||    
T  29557520 ataggcctatgaaaggccataggctaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctgatctggcctggcctattcaca 29557421  T
Q  116 tcccta 121  Q
     |||||    
T  29557420 gcccta 29557415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 12033844 - 12033948
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       ||||||||||||||||||||||||||||| ||||  ||||||  ||||||||||    
T  12033844 ataggcctatgaaaggccataggccaggctcaggcctgcaaaatt-tttgtaggccaggctcaggcctatcaaagtctggcctggcctagcctattccca 12033942  T
Q  116 tcccta 121  Q
     |||||    
T  12033943 acccta 12033948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 6419990 - 6420073
Alignment:
Q  30 ggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcc 113  Q
    ||||||||| ||||||||||||||        || |||||||||||||||||||||||||| ||||  ||||||||||||||||    
T  6419990 ggccataggccaggctcagacttgtgatttatttcgtaggccaggctcaggcctatcaaagtctggcctggcctgacctattcc 6420073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 32084133 - 32084240
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||||||||||||| | |||       || ||||||||| |||||||||||||||| |||   ||||||| ||||||| ||    
T  32084133 ataggcctatgaaaggccataggtcaggctcaggcctgcaaattttttcgtaggccagactcaggcctatcaaagtctgccctggcctggcctattctca 32084232  T
Q  116 tccctagt 123  Q
     |||||||    
T  32084233 accctagt 32084240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 38213501 - 38213422
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctgg 95  Q
    ||||||||||||| ||||||||| ||||||||| | |||       |||||||||||||||||||||||||||| |||||    
T  38213501 ataggcctatgaaaggccataggccaggctcaggcctgcaaatttttttgtaggccaggctcaggcctatcaaaacctgg 38213422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 38448100 - 38448158
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctagt 123  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||| || |||||||    
T  38448100 gtaggccaggctcaggcctatcaaagcctggcctggcctggcctattctcaaccctagt 38448158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 2182741 - 2182843
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||| ||||| ||||||||||||||        || |||||||||||||||||||||||||| ||||  || |||| |||||||||||||    
T  2182741 ggcctatgataggctataggccaggctcagacttgtgatttatttcgtaggccaggctcaggcctatcaaagtctggcctgacctggcctattcccatcc 2182840  T
Q  119 cta 121  Q
    |||    
T  2182841 cta 2182843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 26260288 - 26260390
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||||||||| ||||||||| ||||        || |||||||||||||||||||||||||||||||  || |||| |||||||||| ||    
T  26260288 ggcctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctgacctggcctattcccaacc 26260387  T
Q  119 cta 121  Q
    |||    
T  26260388 cta 26260390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 29768346 - 29768290
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||| ||| |||||    
T  29768346 gtaggccaggctcaggcctatcaaagcctggcctggcctggcctattaccaccccta 29768290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 35959385 - 35959329
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||||||||||||||||||||| |||  ||||||| |||||||||| |||||    
T  35959385 gtaggccaggctcaggcctatcaaagcttggcctggcctggcctattcccaccccta 35959329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 44092830 - 44092933
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||||||||| ||||||||| ||||        || ||||||||||||||| ||||||||| |||||  ||||||| |||||||||| ||    
T  44092830 ggcctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcagacctatcaaaacctggcctggcctggcctattcccaccc 44092929  T
Q  119 ctag 122  Q
    ||||    
T  44092930 ctag 44092933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 6283388 - 6283332
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||| |||| ||||||||||| ||||  |||||||||||||||||| |||||    
T  6283388 gtaggccagactcaagcctatcaaagtctggcctggcctgacctattcccaccccta 6283332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 17852815 - 17852881
Alignment:
Q  62 tttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctagtaggga 128  Q
    |||||||||||| |||||||||||||||| |||   ||||||| |||||||||| || |||| ||||    
T  17852815 tttgtaggccagactcaggcctatcaaagtctgacctggcctggcctattcccaaccttagtgggga 17852881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 43616361 - 43616303
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctagt 123  Q
    |||||||||||||||||||||||||| |||  |||| ||| |||||| ||| |||||||    
T  43616361 gtaggccaggctcaggcctatcaaagtctgacatggtctggcctatttccaaccctagt 43616303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 43999652 - 43999684
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcag 48  Q
    ||||||||||||| |||||||||||||||||||    
T  43999652 ataggcctatgaaaggccataggtcaggctcag 43999684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 20647816 - 20647921
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||||| |||       || |||||||||||||||||||||||||||||||  |||||||||||||| |||    
T  20647816 ataggcctatgaaaggccataggccaggctcagacctgcaaaaattttcgtaggccaggctcaggcctatcaaagcctggcctggcctgacctatttcca 20647915  T
Q  116 tcccta 121  Q
     |||||    
T  20647916 acccta 20647921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 34705330 - 34705435
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       ||||||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  34705330 ataggcctatgaaaggccataggccaggctcaggcctgcaaaaaattttgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 34705429  T
Q  116 tcccta 121  Q
     |||||    
T  34705430 acccta 34705435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 47597105 - 47597210
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  47597105 ataggcctatgaaaggccataggccaggctcaggcctgcaaaaaatttcgtaggccaggctcaggcctatcaaagcctggtctggcctggcctattccca 47597204  T
Q  116 tcccta 121  Q
     |||||    
T  47597205 acccta 47597210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 19421067 - 19420961
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  19421067 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 19420968  T
Q  116 tccctag 122  Q
     ||||||    
T  19420967 accctag 19420961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 29076969 - 29076864
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  29076969 ataggcctatgaaaggccataggccaggctcaggcctgcaaaaattttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 29076870  T
Q  116 tcccta 121  Q
     |||||    
T  29076869 acccta 29076864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 33249517 - 33249412
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  33249517 ataggcctatgaaaggccataggccaggctcaggcctgcaaaatttttcgtaggccaggctcaggcctatcaaagcctggcttggcctggcctattccca 33249418  T
Q  116 tcccta 121  Q
     |||||    
T  33249417 acccta 33249412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 39391155 - 39391050
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  39391155 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 39391056  T
Q  116 tcccta 121  Q
     |||||    
T  39391055 acccta 39391050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 40000800 - 40000905
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  40000800 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 40000899  T
Q  116 tcccta 121  Q
     |||||    
T  40000900 acccta 40000905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 1782705 - 1782810
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| |||||| || | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  1782705 ataggcctatgaaaggccataggccaggcttaggcctgcaaaatttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 1782804  T
Q  116 tcccta 121  Q
     |||||    
T  1782805 acccta 1782810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 13596266 - 13596161
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| |||||||   ||||||||| |||||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  13596266 ataggcctatgaaaggccatataccaggctcaggcttgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 13596167  T
Q  116 tcccta 121  Q
     |||||    
T  13596166 acccta 13596161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 24540997 - 24541102
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  |||| || ||||||||||    
T  24540997 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcttggcctattccca 24541096  T
Q  116 tcccta 121  Q
     |||||    
T  24541097 acccta 24541102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 28793753 - 28793648
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||| ||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  |||||||||||||| |||    
T  28793753 ataggtctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctgacctatttcca 28793654  T
Q  116 tcccta 121  Q
     |||||    
T  28793653 acccta 28793648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 39889377 - 39889318
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctagta 124  Q
    |||||||||||||||||||||||||||||||| ||| ||| |||||||||| ||||||||    
T  39889377 gtaggccaggctcaggcctatcaaagcctggtctggtctggcctattcccacccctagta 39889318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 4357092 - 4357150
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctagt 123  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||| |||||||    
T  4357092 gtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccacccctagt 4357150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 9338332 - 9338386
Alignment:
Q  67 aggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||| |||||    
T  9338332 aggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 9338386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 51302463 - 51302360
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||||||||| ||||||||| ||||        || |||||||||||||||||||||||||||||||  | ||||| |||||||||| ||    
T  51302463 ggcctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctagcctggcctattcccaccc 51302364  T
Q  119 ctag 122  Q
    ||||    
T  51302363 ctag 51302360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 4481705 - 4481648
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctag 122  Q
    ||||||||||||||||||| |||||||||||  ||||||| |||||||||| ||||||    
T  4481705 gtaggccaggctcaggcctttcaaagcctggcctggcctggcctattcccaaccctag 4481648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 34636442 - 34636364
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctg 94  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || ||||||||||||||||||||||||||||||    
T  34636442 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctg 34636364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 33069493 - 33069549
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||| ||||  ||||||| |||||||||| |||||    
T  33069493 gtaggccaggctcaggcctatcaaagtctggcctggcctggcctattcccaacccta 33069549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 41636339 - 41636283
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||| |||||||||||||||||||||  ||||||| |||||||||| |||||    
T  41636339 gtaggccagactcaggcctatcaaagcctggcctggcctggcctattcccaccccta 41636283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 25593695 - 25593791
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    |||||||||  ||||||||| ||||||||||||||        || ||||||||||||||||||||||||||||||   || |||| ||||||||||    
T  25593695 ggcctatgataggccataggccaggctcagacttgtgatttatttcgtaggccaggctcaggcctatcaaagcctgacctgccctggcctattccca 25593791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 40489119 - 40489174
Alignment:
Q  69 gccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctagta 124  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||  |||||||    
T  40489119 gccaggctcaggcctatcaaagcctggtctggcctagcctattcccaatcctagta 40489174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 42294211 - 42294135
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctgg 95  Q
    |||||||||  ||||||||||||||||||| ||||        || |||||||||||||||||||||||||||||||    
T  42294211 ggcctatgataggccataggtcaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctgg 42294135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 47844600 - 47844525
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagc 91  Q
    ||||||||||||| ||||||||| ||||||||||| |||       || ||||||||| |||||||||||||||||    
T  47844600 ataggcctatgaaaggccataggccaggctcagacctgcaaattttttcgtaggccagactcaggcctatcaaagc 47844525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 22523455 - 22523398
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctag 122  Q
    |||||||||||||||| ||||||||||||||| ||  ||| |||||||||| ||||||    
T  22523455 gtaggccaggctcaggtctatcaaagcctggtctgatctggcctattcccacccctag 22523398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 26994829 - 26994885
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||| ||||  ||| ||| |||||||||| |||||    
T  26994829 gtaggccaggctcaggcctatcaaagtctggcctggtctggcctattcccaccccta 26994885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 46116522 - 46116457
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggc 81  Q
    ||||||||||||| ||||||||| ||||||||||| |||       ||||||||||||||||||||    
T  46116522 ataggcctatgaaaggccataggccaggctcagacctgcaaaaaaatttgtaggccaggctcaggc 46116457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 53002260 - 53002183
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcct 93  Q
    ||||| ||||||| ||||||||| || |||||||| |||       |||||||||||||||||| |||||||||||||    
T  53002260 ataggtctatgaaaggccataggccaagctcagacctgcaaatttttttgtaggccaggctcagacctatcaaagcct 53002183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 54447633 - 54447581
Alignment:
Q  69 gccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||  |||| || |||||||||| |||||    
T  54447633 gccaggctcaggcctatcaaagcctggcctggcttggcctattcccaccccta 54447581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 24133858 - 24133782
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctgg 95  Q
    |||||||||  ||||||||| ||||||||| ||||        || |||||||||||||||||||||||||||||||    
T  24133858 ggcctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctgg 24133782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 95
Target Start/End: Original strand, 2222152 - 2222182
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctgg 95  Q
    |||||||||||||||||||||||||||||||    
T  2222152 gtaggccaggctcaggcctatcaaagcctgg 2222182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 36672864 - 36672919
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctag 122  Q
    ||||||||||||||||||||||||||||  |  || |||| |||||||||||||||||    
T  36672864 gtaggccaggctcaggcctatcaaagcc--gcctgacctggcctattcccatccctag 36672919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 95
Target Start/End: Original strand, 41129791 - 41129821
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctgg 95  Q
    |||||||||||||||||||||||||||||||    
T  41129791 gtaggccaggctcaggcctatcaaagcctgg 41129821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 33910198 - 33910153
Alignment:
Q  79 ggcctatcaaagcctggtatggcctgacctattcccatccctagta 124  Q
    |||||||||||||||||  ||||||| |||||||||| ||||||||    
T  33910198 ggcctatcaaagcctggcctggcctggcctattcccaaccctagta 33910153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 7046805 - 7046861
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||| ||| |||||||||||| || |  |||||||||||||||||| |||||    
T  7046805 gtaggccagactctggcctatcaaagtctagcctggcctgacctattcccaccccta 7046861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 41902860 - 41902963
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||||||||| ||||||||| ||||        || |||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  41902860 ggcctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagtctggtatggcctggcctattcccatcc 41902959  T
Q  119 ctag 122  Q
    ||||    
T  41902960 ctag 41902963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 11410626 - 11410521
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  11410626 ataggcctatgaaaggccataggccaggctcaggcctgcaaaaattttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 11410527  T
Q  116 tcccta 121  Q
     |||||    
T  11410526 acccta 11410521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 14776202 - 14776307
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  14776202 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 14776301  T
Q  116 tcccta 121  Q
     |||||    
T  14776302 acccta 14776307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 15943138 - 15943243
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  15943138 ataggcctatgaaaggccataggccaggctcaggcctgcaaaaaatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 15943237  T
Q  116 tcccta 121  Q
     |||||    
T  15943238 acccta 15943243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 2732395 - 2732288
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | ||        || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  2732395 ataggcctatgaaaggccataggccaggctcaggcctgtaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 2732296  T
Q  116 tccctagt 123  Q
     |||||||    
T  2732295 accctagt 2732288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 3357065 - 3356958
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | | |       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  3357065 ataggcctatgaaaggccataggccaggctcaggccttcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 3356966  T
Q  116 tccctagt 123  Q
     |||||||    
T  3356965 accctagt 3356958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 21806556 - 21806499
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctag 122  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||    
T  21806556 gtaggccaggctcaggcctatcaaagcctggtctggcctggcctattcccacccctag 21806499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 2941152 - 2941256
Alignment:
Q  20 gcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccc 119  Q
    ||||||||  ||||||||||||||||||| ||||        |||||||| |||||||||||||||||||| ||||  ||||||| |||||||||| |||    
T  2941152 gcctatgataggccataggtcaggctcaggcttgtgatttattttgtaggtcaggctcaggcctatcaaagtctggcctggcctggcctattcccacccc 2941251  T
Q  120 tagta 124  Q
    |||||    
T  2941252 tagta 2941256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 13391155 - 13391060
Alignment:
Q  20 gcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||  ||||||||| ||||||||| ||||        ||||||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  13391155 gcctatgataggccataggccaggctcaggcttgtgatttattttgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 13391060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 41892226 - 41892123
Alignment:
Q  18 aggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatc 117  Q
    ||||||||||| ||||||||| ||||||||| |||||       || ||| |||||||||||||||||||||| ||||  ||||||| |||||||||| |    
T  41892226 aggcctatgaaaggccataggccaggctcaggcttgcaaattttttcgtaagccaggctcaggcctatcaaagtctggcctggcctggcctattcccaac 41892127  T
Q  118 ccta 121  Q
    ||||    
T  41892126 ccta 41892123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 1411541 - 1411646
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| | ||||||| ||||||||| | |||       || |||||||| ||||||||||||||||||||||  ||||||| ||||||||||    
T  1411541 ataggcctatgaaagaccataggccaggctcaggcctgcaaaatttttcgtaggccaagctcaggcctatcaaagcctggcctggcctggcctattccca 1411640  T
Q  116 tcccta 121  Q
     |||||    
T  1411641 acccta 1411646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 12419174 - 12419271
Alignment:
Q  18 aggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||  ||||||||| ||||||||| ||||        || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  12419174 aggcctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 12419271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 15757713 - 15757769
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||||| |||||    
T  15757713 gtaggccaggctcaggcctatcaaagcctgacctggcctgacctattcccaccccta 15757769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 34521263 - 34521368
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || ||||| |||||||||||||||||||||||||  || |||| ||||||||||    
T  34521263 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggtcaggctcaggcctatcaaagcctggcctgacctggcctattccca 34521362  T
Q  116 tcccta 121  Q
     |||||    
T  34521363 acccta 34521368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 121
Target Start/End: Original strand, 36820936 - 36820991
Alignment:
Q  66 taggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||| ||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  36820936 taggccaagctcaggcctatcaaagcctggtctggcctggcctattcccaacccta 36820991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 2196100 - 2196044
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||  ||||||||||||||| ||||| |||||||||||||||||| |||||    
T  2196100 gtaggccagattcaggcctatcaaagtctggtctggcctgacctattcccaacccta 2196044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 31377421 - 31377365
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||| ||||||||||||||||||||  ||||||| |||||||||| |||||    
T  31377421 gtaggccaggttcaggcctatcaaagcctggcctggcctggcctattcccaccccta 31377365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 44848072 - 44848016
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||||||||||| |||||||||||||  ||||||| |||||||||| |||||    
T  44848072 gtaggccaggctcaggcttatcaaagcctggcctggcctggcctattcccaccccta 44848016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 31249413 - 31249500
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcct 103  Q
    |||||||| |||| ||||||||| |||||||||  ||||       || |||| ||||||||||||||||||||| ||||||||||||    
T  31249413 ataggcctttgaaaggccataggccaggctcaggtttgcgaaaaaattcgtagaccaggctcaggcctatcaaagtctggtatggcct 31249500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 43596243 - 43596293
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    |||||||| ||||||||||||||||||||||  ||||||| ||||||||||    
T  43596243 gtaggccaagctcaggcctatcaaagcctggcctggcctggcctattccca 43596293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 32584877 - 32584844
Alignment:
Q  62 tttgtaggccaggctcaggcctatcaaagcctgg 95  Q
    ||||||||||||||||||||||||||||||||||    
T  32584877 tttgtaggccaggctcaggcctatcaaagcctgg 32584844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 41399779 - 41399835
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctag 122  Q
    |||||||||||||||||||||||||||| ||  ||||||| |||||||||| ||||||    
T  41399779 gtaggccaggctcaggcctatcaaagcc-ggcctggcctggcctattcccaaccctag 41399835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 10227914 - 10227858
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||| ||||  ||||||| ||||||| || |||||    
T  10227914 gtaggccaggctcaggcctatcaaagtctggcctggcctggcctattctcaccccta 10227858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 95
Target Start/End: Original strand, 8485977 - 8486007
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctgg 95  Q
    |||||||||||||||||||||||||||||||    
T  8485977 gtaggccaggctcaggcctatcaaagcctgg 8486007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 95
Target Start/End: Original strand, 18533432 - 18533462
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctgg 95  Q
    |||||||||||||||||||||||||||||||    
T  18533432 gtaggccaggctcaggcctatcaaagcctgg 18533462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 34002839 - 34002892
Alignment:
Q  62 tttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    |||||||||| | |||| ||||||||||||||||| |||| || ||||||||||    
T  34002839 tttgtaggcctgactcaagcctatcaaagcctggtctggcttggcctattccca 34002892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 12077256 - 12077200
Alignment:
Q  66 taggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctag 122  Q
    |||||||| | |||||||||||||| ||||  ||||||| |||||||||| ||||||    
T  12077256 taggccagacccaggcctatcaaagtctggcctggcctggcctattcccaaccctag 12077200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 23671214 - 23671270
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||| || ||||||||||||| ||||  ||||||| |||||||||| |||||    
T  23671214 gtaggccagacttaggcctatcaaagtctggcctggcctggcctattcccaccccta 23671270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 46191736 - 46191792
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||| ||| |||||||||||||||||||||| || |||| | |||||||| |||||    
T  46191736 gtaggtcagactcaggcctatcaaagcctggtctgacctggcgtattcccaccccta 46191792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 24038346 - 24038239
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| |||||||||  |||||||| |||||       || |||||||||||||||||||||||||||||||  || |||||||||||||||    
T  24038346 ataggcctatgaaaggccataggctaggctcaggcttgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctgacctgacctattccca 24038247  T
Q  116 tccctagt 123  Q
     |||||||    
T  24038246 accctagt 24038239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 19507159 - 19507057
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  || |||||||||||||||| ||||        || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  19507159 ggcctatgataggtcataggtcaggctcaggcttgtaatttatttcgtaggccaggctcaggcctatcaaagcctggtctggcctgacctattcccaccc 19507060  T
Q  119 cta 121  Q
    |||    
T  19507059 cta 19507057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 18353193 - 18353088
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||| | ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  18353193 ataggcctatgaaaggccataagccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctgacctattccca 18353094  T
Q  116 tcccta 121  Q
     |||||    
T  18353093 acccta 18353088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 19708992 - 19709097
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  19708992 ataggcctatgaaaggccataggccaggctcaggcctgcaaaaaatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 19709091  T
Q  116 tcccta 121  Q
     |||||    
T  19709092 acccta 19709097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 33785299 - 33785192
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||  | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  33785299 ataggcctatgaaaggccataggccaggctcaagcctgcaaaaaatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 33785200  T
Q  116 tccctagt 123  Q
     |||||||    
T  33785199 accctagt 33785192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 17805918 - 17805813
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || ||| |||||||||||||||||||||||||||  ||||||| ||||||||||    
T  17805918 ataggcctatgaaaggccataggccaggctcaggcctgcaaaatttttcgtatgccaggctcaggcctatcaaagcctggcctggcctggcctattccca 17805819  T
Q  116 tcccta 121  Q
     |||||    
T  17805818 acccta 17805813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 39860481 - 39860586
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||| ||||||||||||||||||||||||||  ||||||| ||||||||||    
T  39860481 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtagaccaggctcaggcctatcaaagcctggcctggcctggcctattccca 39860580  T
Q  116 tcccta 121  Q
     |||||    
T  39860581 acccta 39860586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 52222830 - 52222725
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| |||||| || | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  52222830 ataggcctatgaaaggccataggccaggcttaggcctgcaaaatttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 52222731  T
Q  116 tcccta 121  Q
     |||||    
T  52222730 acccta 52222725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 8417332 - 8417233
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| |||||| || | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  8417332 ataggcctatgaaaggccataggccaggcttaggcctgcaaaatttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 8417233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 5500028 - 5500084
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||| |||||    
T  5500028 gtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 5500084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 13253347 - 13253270
Alignment:
Q  18 aggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctgg 95  Q
    ||||||||||| ||||||||||||||||||| | |||       || |||||||||||||||||||||||||||||||    
T  13253347 aggcctatgaaaggccataggtcaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctgg 13253270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 39919660 - 39919604
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||| |||||    
T  39919660 gtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 39919604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 23555801 - 23555743
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctagt 123  Q
    ||||||||||||||||||||||||||||||   ||||||| |||||||||| |||||||    
T  23555801 gtaggccaggctcaggcctatcaaagcctgacctggcctggcctattcccacccctagt 23555743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 46846863 - 46846784
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctgg 95  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||    
T  46846863 ataggcctatgaaaggccataggccaggctcaggcctgcaaaatttttcgtaggccaggctcaggcctatcaaagcctgg 46846784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 6889577 - 6889633
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||||  ||||||  |||||||||| |||||    
T  6889577 gtaggccaggctcaggcctatcaaagcctggcctggcctagcctattcccaacccta 6889633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 6891423 - 6891479
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||||  ||||||  |||||||||| |||||    
T  6891423 gtaggccaggctcaggcctatcaaagcctggcctggcctagcctattcccaacccta 6891479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 10805073 - 10805017
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||| ||||||||||||||||  ||||||| |||||||||| |||||    
T  10805073 gtaggccaggctcatgcctatcaaagcctggcctggcctggcctattcccaccccta 10805017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 15321966 - 15322022
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||||  || |||| |||||||||| |||||    
T  15321966 gtaggccaggctcaggcctatcaaagcctggcctgacctggcctattcccaccccta 15322022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 6305079 - 6305024
Alignment:
Q  66 taggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||| |||||||||||||||  ||||||| |||||||||| |||||    
T  6305079 taggccaggctcagacctatcaaagcctggcctggcctggcctattcccaccccta 6305024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 10312049 - 10311990
Alignment:
Q  62 tttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||||| |  || |||| |||||||||| |||||    
T  10312049 tttgtaggccaggctcaggcctatcaaagcctagcctgacctggcctattcccaccccta 10311990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 16452440 - 16452385
Alignment:
Q  66 taggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||| ||||||||||||||||||||||||  ||||||| |||||||||| |||||    
T  16452440 taggctaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 16452385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 16461592 - 16461537
Alignment:
Q  66 taggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||| ||||||||||||||||||||||||  ||||||| |||||||||| |||||    
T  16461592 taggctaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 16461537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 18342660 - 18342557
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||||||||| ||||||||| ||||        || |||||||||||||| ||||||||||| ||||| ||| ||| |||||||||| ||    
T  18342660 ggcctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaagcctatcaaagtctggtctggtctggcctattcccaccc 18342561  T
Q  119 ctag 122  Q
    ||||    
T  18342560 ctag 18342557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 44779546 - 44779600
Alignment:
Q  66 taggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccct 120  Q
    |||| |||||||||||||||||||||||||  ||||||| |||||||||| ||||    
T  44779546 taggtcaggctcaggcctatcaaagcctggcctggcctggcctattcccacccct 44779600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 32239307 - 32239404
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcc 113  Q
    ||||||||||||| ||||||||| |||||||||   |||       ||  ||||| |||||||||||||||||| |||||  ||||||||||||||||    
T  32239307 ataggcctatgaaaggccataggccaggctcaggactgcaaaaaatttcataggctaggctcaggcctatcaaaacctggcctggcctgacctattcc 32239404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 34084074 - 34083977
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcc 113  Q
    ||||||||||||| ||||||||| ||| ||||| | |||       || |||||||||||||||||||||||||| ||||  ||| ||| ||||||||    
T  34084074 ataggcctatgaaaggccataggccagactcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagtctggcctggtctggcctattcc 34083977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 44912653 - 44912597
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||| ||| |||||||||||||||| ||||  || |||||||||||||||||||||    
T  44912653 gtaggtcagactcaggcctatcaaagtctggcctgacctgacctattcccatcccta 44912597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 50097061 - 50097166
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| || |||||||| |||       || ||||||||  |||| |||||||||| |||| | ||||||| ||||||||||    
T  50097061 ataggcctatgaaaggccataggccatgctcagacctgcaaattttttcgtaggccaaactcaagcctatcaaaacctgatctggcctggcctattccca 50097160  T
Q  116 tcccta 121  Q
     |||||    
T  50097161 acccta 50097166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 15849869 - 15849814
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccct 120  Q
    ||||||||| ||||||||||||||| |||||  ||||||| |||||||||| ||||    
T  15849869 gtaggccagactcaggcctatcaaatcctggcctggcctggcctattcccacccct 15849814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 26257445 - 26257390
Alignment:
Q  66 taggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||| ||| |||||||||||||||||||| | ||||||| |||||||||| |||||    
T  26257445 taggtcagactcaggcctatcaaagcctgatctggcctggcctattcccaccccta 26257390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 45372816 - 45372863
Alignment:
Q  68 ggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||| |||||||||||| |||||||||  ||||||||||||||||||    
T  45372816 ggccatgctcaggcctataaaagcctggcctggcctgacctattccca 45372863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 95
Target Start/End: Original strand, 7109651 - 7109681
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctgg 95  Q
    |||||||||||||||||||||||||||||||    
T  7109651 gtaggccaggctcaggcctatcaaagcctgg 7109681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 13077396 - 13077293
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||||||||| ||||||||| ||||        || |||||| ||||||||||||||||||| ||||  || |||| |||||||||| ||    
T  13077396 ggcctatgataggccataggccaggctcaggcttgtgatttatttcgtaggctaggctcaggcctatcaaagtctggcctgacctggcctattcccaccc 13077297  T
Q  119 ctag 122  Q
    ||||    
T  13077296 ctag 13077293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 95
Target Start/End: Original strand, 31493510 - 31493540
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctgg 95  Q
    |||||||||||||||||||||||||||||||    
T  31493510 gtaggccaggctcaggcctatcaaagcctgg 31493540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 95
Target Start/End: Original strand, 5506939 - 5506968
Alignment:
Q  66 taggccaggctcaggcctatcaaagcctgg 95  Q
    ||||||||||||||||||||||||||||||    
T  5506939 taggccaggctcaggcctatcaaagcctgg 5506968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 12298190 - 12298133
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctag 122  Q
    ||||||||| ||||||||||||||| ||| |  ||||||| |||||||||| ||||||    
T  12298190 gtaggccagactcaggcctatcaaaacctagcctggcctggcctattcccacccctag 12298133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 34050077 - 34050133
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||||||||  |||||||||| ||||  |||||||||||||| ||| |||||    
T  34050077 gtaggccaggctcaaacctatcaaagtctggcctggcctgacctatttccaccccta 34050133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 42650104 - 42650160
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||| |||||||||||||||||||| | |  ||||||| |||||||||| |||||    
T  42650104 gtaggctaggctcaggcctatcaaagcttagcctggcctggcctattcccaccccta 42650160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 41005 - 40899
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  41005 ataggcctatgaaaggccataggccaggctcaggcctgcaaaaaatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 40906  T
Q  116 tccctag 122  Q
     ||||||    
T  40905 accctag 40899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 11877564 - 11877462
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||||||||||||||||||| ||||        || |||||||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  11877564 ggcctatgataggccataggtcaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctggcctgacctattcccaacc 11877465  T
Q  119 cta 121  Q
    |||    
T  11877464 cta 11877462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 9163533 - 9163428
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  9163533 ataggcctatgaaaggccataggccaggctcaggcctgcaaaaattttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 9163434  T
Q  116 tcccta 121  Q
     |||||    
T  9163433 acccta 9163428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 18158480 - 18158376
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||||||||| ||||||||| ||||        || |||||||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  18158480 ggcctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctggcctgacctattcccaacc 18158381  T
Q  119 ctagt 123  Q
    |||||    
T  18158380 ctagt 18158376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 6644176 - 6644283
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || ||||||||||||||||||||| |||||||||| ||| ||| ||||||||||    
T  6644176 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctattaaagcctggtctggtctggcctattccca 6644275  T
Q  116 tccctagt 123  Q
     |||||||    
T  6644276 accctagt 6644283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 42062325 - 42062430
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    |||||| |||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  42062325 ataggcttatgaaaggccataggccaggctcaggcctgcaaaaaatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 42062424  T
Q  116 tcccta 121  Q
     |||||    
T  42062425 acccta 42062430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 10017819 - 10017761
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctagt 123  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||| |||||||    
T  10017819 gtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccacccctagt 10017761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 38254795 - 38254693
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||||||||| ||||||||||||||        || |||||||||||||||||||||||||| ||||  ||||||| |||||||||| ||    
T  38254795 ggcctatgataggccataggccaggctcagacttgtgatttacttcgtaggccaggctcaggcctatcaaagtctggcctggcctggcctattcccaccc 38254696  T
Q  119 cta 121  Q
    |||    
T  38254695 cta 38254693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 40084085 - 40083983
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||||||||| ||||||||| ||||        || |||||||||||||||||||||||||||||||  ||||||| |||||||||| ||    
T  40084085 ggcctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacc 40083986  T
Q  119 cta 121  Q
    |||    
T  40083985 cta 40083983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 12880564 - 12880455
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgaccta-ttccc 114  Q
    ||||||||||||| || |||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| |||| |||||    
T  12880564 ataggcctatgaaaggtcataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctatttccc 12880465  T
Q  115 atccctagta 124  Q
    | ||||||||    
T  12880464 aaccctagta 12880455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 14949592 - 14949648
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||| |||||    
T  14949592 gtaggccaggctcagacctatcaaagcctggcctggcctgacctattcccaccccta 14949648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 31271452 - 31271557
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | | |       || |||||||||||| ||||||||||||||||||  ||||||| ||||||||||    
T  31271452 ataggcctatgaaaggccataggccaggctcaggcctacaaattttttcgtaggccaggcttaggcctatcaaagcctggcctggcctggcctattccca 31271551  T
Q  116 tcccta 121  Q
     |||||    
T  31271552 acccta 31271557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 12724947 - 12725051
Alignment:
Q  17 taggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccat 116  Q
    |||||||||||| ||||||||||||||||||| |||         || |||| ||| |||||| |||||||||||||||| | ||||||||||||||||     
T  12724947 taggcctatgaaaggccataggtcaggctcaggcttaaaaaataattcgtagaccaagctcagacctatcaaagcctggtctagcctgacctattcccaa 12725046  T
Q  117 cccta 121  Q
    |||||    
T  12725047 cccta 12725051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 491309 - 491251
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctagt 123  Q
    |||||||||||| ||||||||||||||||||  ||||||| |||||||||| |||||||    
T  491309 gtaggccaggcttaggcctatcaaagcctggcctggcctggcctattcccaaccctagt 491251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 4101282 - 4101183
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||||||||||||| | |||       || ||||| ||| |||||||||||||||||||||  || |||| ||||||||||    
T  4101282 ataggcctatgaaaggccataggtcaggctcaggcctgcaaaatttttcgtaggtcagactcaggcctatcaaagcctggcctgacctggcctattccca 4101183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 7079095 - 7078990
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||| ||||||||||||||||  || |||| || |||||||    
T  7079095 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaagcctatcaaagcctggcctgacctggcccattccca 7078996  T
Q  116 tcccta 121  Q
     |||||    
T  7078995 acccta 7078990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 27332565 - 27332621
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||||||||||| | |||||||||||| ||||||| |||||||||| |||||    
T  27332565 gtaggccaggctcaggcatttcaaagcctggtctggcctggcctattcccaacccta 27332621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 15397613 - 15397563
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||||| |||||||||| ||||  ||||||||||||||||||    
T  15397613 gtaggccaggctcagacctatcaaagtctggcctggcctgacctattccca 15397563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 112
Target Start/End: Complemental strand, 31624170 - 31624131
Alignment:
Q  73 ggctcaggcctatcaaagcctggtatggcctgacctattc 112  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  31624170 ggctcaggcctatcaaagcctgatctggcctgacctattc 31624131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 370206 - 370164
Alignment:
Q  71 caggctcaggcctatcaaagcctggtatggcctgacctattcc 113  Q
    |||||||||||||||||||| || || ||||||||||||||||    
T  370206 caggctcaggcctatcaaagtcttgtctggcctgacctattcc 370164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 12786478 - 12786528
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    |||| ||| |||||| |||||||||||||||| || |||||||||||||||    
T  12786478 gtagaccaagctcagacctatcaaagcctggtctgacctgacctattccca 12786528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 95
Target Start/End: Original strand, 17870109 - 17870139
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctgg 95  Q
    |||||||||||||||||||||||||||||||    
T  17870109 gtaggccaggctcaggcctatcaaagcctgg 17870139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 95
Target Start/End: Original strand, 27054565 - 27054595
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctgg 95  Q
    |||||||||||||||||||||||||||||||    
T  27054565 gtaggccaggctcaggcctatcaaagcctgg 27054595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 31624202 - 31624169
Alignment:
Q  62 tttgtaggccaggctcaggcctatcaaagcctgg 95  Q
    ||||||||||||||||| ||||||||||||||||    
T  31624202 tttgtaggccaggctcaagcctatcaaagcctgg 31624169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 26241372 - 26241267
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  26241372 ataggcctatgaaaggccataggccaggctcaggcctgcaaaaaatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 26241273  T
Q  116 tcccta 121  Q
     |||||    
T  26241272 acccta 26241267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 11989134 - 11989027
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||||||||||||| | |||       || || |||||||||||||||||||||||| |||  ||||||| ||||||||||    
T  11989134 ataggcctatgaaaggccataggtcaggctcaggcctgcaaattttttcgttggccaggctcaggcctatcaaagcatggcctggcctggcctattccca 11989035  T
Q  116 tccctagt 123  Q
     |||||||    
T  11989034 accctagt 11989027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 36684777 - 36684672
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || ||||||||||||||||||||||||||| |||  ||||||| ||||||||||    
T  36684777 ataggcctatgaaaggccataggccaggctcaggcctgcaaaaattttcgtaggccaggctcaggcctatcaaagcgtggcctggcctggcctattccca 36684678  T
Q  116 tcccta 121  Q
     |||||    
T  36684677 acccta 36684672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 23950393 - 23950294
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || ||||||||||||||||| |||||||||||||  ||||||| ||||||||||    
T  23950393 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcttatcaaagcctggcctggcctggcctattccca 23950294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 44755600 - 44755542
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctagt 123  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||| |||||||    
T  44755600 gtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccacccctagt 44755542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 14921468 - 14921366
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||||||||| ||||||||| ||||        || |||||||||||||||||||||||||||||||  ||||||| |||||||||| ||    
T  14921468 ggcctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccc 14921369  T
Q  119 cta 121  Q
    |||    
T  14921368 cta 14921366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 7383239 - 7383295
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||| |||||    
T  7383239 gtaggccaggctcaggcctatcaaagcctggcttggcctggcctattcccaccccta 7383295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 12638041 - 12637985
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||| |||||    
T  12638041 gtaggccaggcttaggcctatcaaagcctggcctggcctgacctattcccaccccta 12637985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 32551641 - 32551697
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||||  ||| |||||||||||||| |||||    
T  32551641 gtaggccaggctcaggcctatcaaagcctggcctggtctgacctattcccaacccta 32551697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 38600895 - 38600951
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||| |||||    
T  38600895 gtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 38600951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 121
Target Start/End: Original strand, 16383970 - 16384025
Alignment:
Q  66 taggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||||||||||||||||||||||||  ||||||| |||||||||| |||||    
T  16383970 taggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 16384025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 40680451 - 40680347
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||||||||| ||||||||| ||||        || ||||||||||||||||||||||| |||||||| || |||| |||||| ||||||    
T  40680451 ggcctatgataggccataggccaggctcaggcttgtaaattttttcgtaggccaggctcaggcctatcatagcctggtctgacctggcctatttccatcc 40680352  T
Q  119 ctagt 123  Q
    |||||    
T  40680351 ctagt 40680347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 32983223 - 32983325
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||||||||||||||||||| ||||        || |||||||||||||||||||||||||||||    ||||||| |||||||||| ||    
T  32983223 ggcctatgataggccataggtcaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctaacctggcctggcctattcccaccc 32983322  T
Q  119 cta 121  Q
    |||    
T  32983323 cta 32983325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 24580497 - 24580441
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||| ||||  ||||||| |||||||||| |||||    
T  24580497 gtaggccaggctcaggcctatcaaagtctggcctggcctggcctattcccaccccta 24580441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 36054662 - 36054767
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| |  ||       || |||||||||||||||||||||||||||||||  |||  || ||||||||||    
T  36054662 ataggcctatgaaaggccataggccaggctcaggccagcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggtatggcctattccca 36054761  T
Q  116 tcccta 121  Q
     |||||    
T  36054762 acccta 36054767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 44710133 - 44710077
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||| ||||||||||||||||||| ||||| || |||| ||||||||||||||||    
T  44710133 gtaggcgaggctcaggcctatcaaagtctggtctgacctggcctattcccatcccta 44710077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 32415404 - 32415463
Alignment:
Q  66 taggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctagtag 125  Q
    |||| ||||||||||||||||||||||||   ||||||| |||||||||| |||||||||    
T  32415404 taggtcaggctcaggcctatcaaagcctgacctggcctggcctattcccaaccctagtag 32415463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 33303803 - 33303879
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctgg 95  Q
    |||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||    
T  33303803 ggcctatgaaaggccataggccaggctcaggcctgcaaaaattttcgtaggccaggctcaggcctatcaaagcctgg 33303879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 35056235 - 35056178
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctag 122  Q
    ||||||||||||||||||||||||||||||   || |||| |||||||||| ||||||    
T  35056235 gtaggccaggctcaggcctatcaaagcctgacctgacctggcctattcccacccctag 35056178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 7323210 - 7323315
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||| | ||||||||| | |||       || |||||| |||||||||||||| |||| ||||  ||||||| ||||||||||    
T  7323210 ataggcctatgaaaggccatatgccaggctcaggcctgcaaattttttcgtaggctaggctcaggcctattaaagtctggcctggcctggcctattccca 7323309  T
Q  116 tcccta 121  Q
     |||||    
T  7323310 acccta 7323315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 16365049 - 16365105
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||| |||||||||||||||| ||||  ||||||| |||||||||| |||||    
T  16365049 gtaggccagactcaggcctatcaaagtctggcctggcctggcctattcccaccccta 16365105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 26106434 - 26106378
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||| |||||||||| |||||||||||  ||||||| |||||||||| |||||    
T  26106434 gtaggccaagctcaggcctttcaaagcctggcctggcctggcctattcccaacccta 26106378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 39506697 - 39506753
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||||||||||||| |||||| ||||| ||||||| |||||| ||| |||||    
T  39506697 gtaggccaggctcaggcctttcaaagtctggtctggcctggcctatttccaacccta 39506753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 8000118 - 8000044
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcct 93  Q
    |||||||||  ||||||||| ||||||||| ||||        || |||||||||||||||||||||||||||||    
T  8000118 ggcctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcct 8000044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 94
Target Start/End: Complemental strand, 23444452 - 23444423
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctg 94  Q
    ||||||||||||||||||||||||||||||    
T  23444452 gtaggccaggctcaggcctatcaaagcctg 23444423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 7960628 - 7960684
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||| ||||||||||||||||||||   ||||||| | |||||||| |||||    
T  7960628 gtaggccagactcaggcctatcaaagcctgacctggcctggcttattcccaccccta 7960684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 10921124 - 10921068
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||| |||||||||||||||||||||||||  |||||   |||||||||| |||||    
T  10921124 gtaggtcaggctcaggcctatcaaagcctggcctggccaagcctattcccaacccta 10921068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 32415385 - 32415417
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcag 48  Q
    ||||||||||||| |||||||||||||||||||    
T  32415385 ataggcctatgaaaggccataggtcaggctcag 32415417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 3027303 - 3027408
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  3027303 ataggcctatgaaaggccataggccaggctcaggcctgcaaaaattttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 3027402  T
Q  116 tcccta 121  Q
     |||||    
T  3027403 acccta 3027408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 13276665 - 13276560
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  13276665 ataggcctatgaaaggccataggccaggctcaggcctgcaaaatttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 13276566  T
Q  116 tcccta 121  Q
     |||||    
T  13276565 acccta 13276560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 28890927 - 28891032
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  28890927 ataggcctatgaaaggccataggccaggctcaggcctgcaaaatttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 28891026  T
Q  116 tcccta 121  Q
     |||||    
T  28891027 acccta 28891032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 121
Target Start/End: Original strand, 4174283 - 4174342
Alignment:
Q  62 tttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||    
T  4174283 tttgtaggccaggctcaggcctatcaaagcctggcatggcctggcctattcccaccccta 4174342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 479247 - 479297
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  479247 gtaggccaggctcaggcctatcaaagcctggtctggcctgacctattccca 479297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 4111403 - 4111508
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| || |||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  4111403 ataggcctatgaaaggtcataggccaggctcaggcctgcaaaaattttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 4111502  T
Q  116 tcccta 121  Q
     |||||    
T  4111503 acccta 4111508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 33042838 - 33042780
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctagt 123  Q
    ||||| ||||||||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  33042838 gtaggtcaggctcaggcctatcaaaacctggtttggcctggcctattcccatccctagt 33042780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 1101290 - 1101188
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||||||||| ||||||||| ||||        || |||||||||||||||||||||||||||||||  ||||||| |||||||||| ||    
T  1101290 ggcctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacc 1101191  T
Q  119 cta 121  Q
    |||    
T  1101190 cta 1101188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 1558662 - 1558606
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||||| |||||    
T  1558662 gtaggccaggctcaggcctatcaaagcctgacctggcctgacctattcccaccccta 1558606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 3729120 - 3729176
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||| |||||    
T  3729120 gtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 3729176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 8437591 - 8437696
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || ||||||||| |||||||||||||||| ||||  ||||||| ||||||||||    
T  8437591 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccagactcaggcctatcaaagtctggcctggcctggcctattccca 8437690  T
Q  116 tcccta 121  Q
     |||||    
T  8437691 acccta 8437696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 32187306 - 32187408
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||||||||| ||||||||| ||||        || ||||||||||||||||||||||||||| |||  ||||||| |||||||||| ||    
T  32187306 ggcctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcatggcctggcctggcctattcccaccc 32187405  T
Q  119 cta 121  Q
    |||    
T  32187406 cta 32187408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 5153421 - 5153316
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||  | |||       || ||||||||||||||| | |||||||||||||  ||||||| ||||||||||    
T  5153421 ataggcctatgaaaggccataggccaggctcaagcctgcaaaatttttcgtaggccaggctcagacttatcaaagcctggcctggcctggcctattccca 5153322  T
Q  116 tcccta 121  Q
     |||||    
T  5153321 acccta 5153316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 24012036 - 24011957
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctgg 95  Q
    ||||||||||||| ||||||||| ||||||| | | |||       || |||||||||||||||||||||||||||||||    
T  24012036 ataggcctatgaaaggccataggccaggctcgggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctgg 24011957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 31803135 - 31803234
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||||| |||       || ||||| |||||||| | |||||||||||||   ||| ||||||||||||||    
T  31803135 ataggcctatgaaaggccataggccaggctcagacctgcaaattttttcgtaggtcaggctcaagtctatcaaagcctgacctggtctgacctattccca 31803234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 13041763 - 13041819
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||| ||||||||||||||||||| |  ||||||| |||||||||| |||||    
T  13041763 gtaggccagactcaggcctatcaaagcctagcctggcctggcctattcccaccccta 13041819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 104
Target Start/End: Original strand, 4229899 - 4229938
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctg 104  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  4229899 gtaggccaggctcaggcctatcaaagcctggcctggcctg 4229938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 95
Target Start/End: Complemental strand, 23645914 - 23645885
Alignment:
Q  66 taggccaggctcaggcctatcaaagcctgg 95  Q
    ||||||||||||||||||||||||||||||    
T  23645914 taggccaggctcaggcctatcaaagcctgg 23645885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 38308092 - 38308197
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  38308092 ataggcctatgaaaggccataggccaggctcaggcctgcaaaatttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 38308191  T
Q  116 tcccta 121  Q
     |||||    
T  38308192 acccta 38308197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 40730457 - 40730562
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  40730457 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 40730556  T
Q  116 tcccta 121  Q
     |||||    
T  40730557 acccta 40730562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 48826105 - 48826000
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  48826105 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 48826006  T
Q  116 tcccta 121  Q
     |||||    
T  48826005 acccta 48826000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 8753806 - 8753911
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||| ||||||||||||||||  ||||||| ||||||||||    
T  8753806 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcatgcctatcaaagcctggcctggcctggcctattccca 8753905  T
Q  116 tcccta 121  Q
     |||||    
T  8753906 acccta 8753911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 9627591 - 9627486
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||||||| ||||| | |||       ||||||||||||||||||||||||||||||||||  || |||| |||||| |||    
T  9627591 ataggcctatgaaaggccataggtcagactcaggcctgcaaattcttttgtaggccaggctcaggcctatcaaagcctggcctgacctggcctatttcca 9627492  T
Q  116 tcccta 121  Q
     |||||    
T  9627491 acccta 9627486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 17981321 - 17981423
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||||||||| ||||||||| ||||        || |||||||||||||||||||||||||| ||||| ||||||| |||||||||| ||    
T  17981321 ggcctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagtctggtctggcctggcctattcccaccc 17981420  T
Q  119 cta 121  Q
    |||    
T  17981421 cta 17981423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 29590493 - 29590595
Alignment:
Q  19 ggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcc 118  Q
    |||||||||  ||||||||| ||||||||| ||||        || |||||||||||||||||||||||||||||||  ||||||| |||||||||| ||    
T  29590493 ggcctatgataggccataggccaggctcaggcttgtgatttatttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccc 29590592  T
Q  119 cta 121  Q
    |||    
T  29590593 cta 29590595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 3097932 - 3097988
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||| |||||    
T  3097932 gtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 3097988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 10010887 - 10010992
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| | ||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  || |||| ||||||||||    
T  10010887 ataggcctatgaaagaccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctgacctggcctattccca 10010986  T
Q  116 tcccta 121  Q
     |||||    
T  10010987 acccta 10010992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 10018028 - 10018133
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| | ||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||  || |||| ||||||||||    
T  10018028 ataggcctatgaaagaccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctggcctgacctggcctattccca 10018127  T
Q  116 tcccta 121  Q
     |||||    
T  10018128 acccta 10018133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 11845423 - 11845479
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||| |||||    
T  11845423 gtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 11845479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 48089811 - 48089916
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||| | ||||||||| | |||       || ||||||||||||||||||||||||||||||   ||||||| ||||||||||    
T  48089811 ataggcctatgaaaggccatatgccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctgacctggcctggcctattccca 48089910  T
Q  116 tcccta 121  Q
     |||||    
T  48089911 acccta 48089916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 20039674 - 20039753
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctgg 95  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||    
T  20039674 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaggcctatcaaagcctgg 20039753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 41487554 - 41487475
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctgg 95  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||||||||||||||||||||    
T  41487554 ataggcctatgaaaggccataggccaggctcaggcctgcaaaaattttcgtaggccaggctcaggcctatcaaagcctgg 41487475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 4422116 - 4422060
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||| ||||||||||||||  ||||||| |||||||||| |||||    
T  4422116 gtaggccaggctcaggtctatcaaagcctggcctggcctggcctattcccaccccta 4422060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 22270465 - 22270521
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||| |||||||||||||||||||||| || || ||||||||||||||| |||||    
T  22270465 gtaggctaggctcaggcctatcaaagccttgtctgacctgacctattcccaccccta 22270521  T

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Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 36488827 - 36488771
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||||||||| |||||||||| ||||  ||||||| ||||||||||||||||    
T  36488827 gtaggccaggctcagacctatcaaagtctggcctggcctggcctattcccatcccta 36488771  T

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Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 121
Target Start/End: Original strand, 40412838 - 40412893
Alignment:
Q  66 taggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||| || |||||||||||||||||||||  |||||||||||||||||| |||||    
T  40412838 taggctagactcaggcctatcaaagcctggcctggcctgacctattcccaacccta 40412893  T

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Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 16711848 - 16711742
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    |||||||| |||| ||||||||| ||||||||| | |||       || ||||||||| ||||| ||||||||||||| |  |||||||||||||| |||    
T  16711848 ataggcctgtgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccagactcagacctatcaaagcctagcttggcctgacctatttcca 16711749  T
Q  116 tccctag 122  Q
     ||||||    
T  16711748 accctag 16711742  T

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Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 32212272 - 32212215
Alignment:
Q  66 taggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctagt 123  Q
    |||||| |||||||||||||||||||||||  | ||||| |||||||||| |||||||    
T  32212272 taggcccggctcaggcctatcaaagcctggcctagcctggcctattcccaaccctagt 32212215  T

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Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 517604 - 517548
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||||||||| |||||||||| ||||  || ||||||||||||||| |||||    
T  517604 gtaggccaggctcagacctatcaaagtctggcctgacctgacctattcccaccccta 517548  T

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Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 25040256 - 25040312
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||| |||| ||||||||||| ||| | |||||||||||||||||| |||||    
T  25040256 gtaggccagactcaagcctatcaaagtctgatctggcctgacctattcccaccccta 25040312  T

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Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 31842902 - 31842846
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||||  || |||| | |||||||| |||||    
T  31842902 gtaggccaggctcaggcctatcaaagcctggcctgacctggcttattcccaccccta 31842846  T

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Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 37011052 - 37011108
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||| ||||  ||||||  |||||||||| |||||    
T  37011052 gtaggccaggctcaggcctatcaaagtctggcctggcctagcctattcccaacccta 37011108  T

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Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 48659376 - 48659320
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||| |||||||||||||||||||||| |  ||||||| |||||||||| |||||    
T  48659376 gtaggctaggctcaggcctatcaaagcctagcctggcctggcctattcccaccccta 48659320  T

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Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 5258815 - 5258756
Alignment:
Q  62 tttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||||||||||||| ||||||||||||||  || |||  |||||||||| |||||    
T  5258815 tttgtaggccaggctcaggtctatcaaagcctggcctgacctagcctattcccaccccta 5258756  T

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Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 101
Target Start/End: Original strand, 35041842 - 35041881
Alignment:
Q  62 tttgtaggccaggctcaggcctatcaaagcctggtatggc 101  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  35041842 tttgtaggccaggctcaggcctatcaaagtctggtctggc 35041881  T

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Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 50637248 - 50637306
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctagt 123  Q
    |||||||| ||||||||||||||||||||||  || |||  |||||||||| |||||||    
T  50637248 gtaggccaagctcaggcctatcaaagcctggcctgacctagcctattcccacccctagt 50637306  T

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Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 20392995 - 20393040
Alignment:
Q  66 taggccaggctcaggcctatcaaagcctggtatggcctgacctatt 111  Q
    |||||||||||||||||||||||||||||   ||||||| ||||||    
T  20392995 taggccaggctcaggcctatcaaagcctgacctggcctggcctatt 20393040  T

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Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 45783937 - 45783974
Alignment:
Q  66 taggccaggctcaggcctatcaaagcctggtatggcct 103  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  45783937 taggccagactcaggcctatcaaagcctggtctggcct 45783974  T

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Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 46903961 - 46904018
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatccctag 122  Q
    ||||| ||||||||||||||||||||| |||  |||||||  ||||||||| ||||||    
T  46903961 gtaggtcaggctcaggcctatcaaagcatggcctggcctggtctattcccacccctag 46904018  T

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Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 12582155 - 12582099
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||| |||||||||||||||||||||  |||||||  |||||| || |||||    
T  12582155 gtaggccagactcaggcctatcaaagcctggcctggcctggactattctcaccccta 12582099  T

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Target: scaffold0275 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 9210 - 9151
Alignment:
Q  62 tttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  9210 tttgtaggccaggctcaggcctatcaaagcctggtctggcctggcctattcccaccccta 9151  T

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Target: scaffold0037 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 81359 - 81464
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||| ||||||||||||||||  ||||||| ||||||||||    
T  81359 ataggcctatgaaaggccataggccaggctcaggcctgcaaattttttcgtaggccaggctcaagcctatcaaagcctggcctggcctggcctattccca 81458  T
Q  116 tcccta 121  Q
     |||||    
T  81459 acccta 81464  T

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Target: scaffold0065 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 40079 - 39972
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| ||||||||| ||||||||| | |||       || |||||||||||||| |||||||||||||||   ||| ||| ||||||||||    
T  40079 ataggcctatgaaaggccataggccaggctcaggcctgcaatttttttcgtaggccaggctcaagcctatcaaagcctgacctggtctggcctattccca 39980  T
Q  116 tccctagt 123  Q
     |||||||    
T  39979 accctagt 39972  T

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Target: scaffold0067 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 14358 - 14464
Alignment:
Q  16 ataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    ||||||||||||| || |||||| ||||||||| | |||       || ||||||||| |||||||||||||||||||||  || |||| ||||||||||    
T  14358 ataggcctatgaaaggacatagggcaggctcaggcctgcaaaaattttcgtaggccagactcaggcctatcaaagcctggcctgacctggcctattccca 14457  T
Q  116 tccctag 122  Q
     ||||||    
T  14458 accctag 14464  T

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Target: scaffold0422 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 10692 - 10638
Alignment:
Q  67 aggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||||  || |||| |||||||||| |||||    
T  10692 aggccaggctcaggcctatcaaagcctggcctgacctggcctattcccaccccta 10638  T

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Target: scaffold0288 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 7207 - 7154
Alignment:
Q  62 tttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattccca 115  Q
    |||||||| ||||||||||||||||||||| |||| ||  ||||||||||||||    
T  7207 tttgtaggtcaggctcaggcctatcaaagcatggtctgatctgacctattccca 7154  T

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Target: scaffold1702 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1702
Description:

Target: scaffold1702; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 1 - 53
Alignment:
Q  69 gccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||||||||||||||  || |||| |||||||||| |||||    
T  1 gccaggctcaggcctatcaaagcctggcctgacctggcctattcccaccccta 53  T

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Target: scaffold1625 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1625
Description:

Target: scaffold1625; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 1319 - 1216
Alignment:
Q  13 aatataggcctatgaagggccataggtcaggctcagacttgcnnnnnnntttgtaggccaggctcaggcctatcaaagcctggtatggcctgacctattc 112  Q
    |||||||||||||||| ||||||||| ||||||| | | |||       |  ||||||||||||||| ||||||||||||     |||||||||||||||    
T  1319 aatataggcctatgaaaggccataggccaggctctggcctgcaaaaaattccgtaggccaggctcagacctatcaaagcc-----tggcctgacctattc 1225  T
Q  113 ccatcccta 121  Q
    ||| |||||    
T  1224 ccaacccta 1216  T

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Target: scaffold0259 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 24863 - 24808
Alignment:
Q  66 taggccaggctcaggcctatcaaagcctggtatggcctgacctattcccatcccta 121  Q
    |||||||||||||||| |||||||||||||  ||| ||| |||||||||| |||||    
T  24863 taggccaggctcaggcttatcaaagcctggcttggtctggcctattcccaacccta 24808  T

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Target: scaffold0886 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 95
Target Start/End: Original strand, 1855 - 1885
Alignment:
Q  65 gtaggccaggctcaggcctatcaaagcctgg 95  Q
    |||||||||||||||||||||||||||||||    
T  1855 gtaggccaggctcaggcctatcaaagcctgg 1885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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