View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1305_high_86 (Length: 251)
Name: NF1305_high_86
Description: NF1305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1305_high_86 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 8252838 - 8253074
Alignment:
| Q |
15 |
tatagtagttggtaattcaataaggaatttcaatttttggaataaatataatttttccatttatagggtattgtaagaaaagctagggagattcctgata |
114 |
Q |
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| T |
8252838 |
tatagtagttggtaattcaataaggaatttcaatttttggaataaatataatttttccatttatagggtattgtaagaaaagctagggagattcctgata |
8252937 |
T |
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| Q |
115 |
ttattctcttgaacctttctgctttttgattcccaaggacaagggaaaaagatatctattttatctcattacaaaaccacagtgtcattaggtggaaaag |
214 |
Q |
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| T |
8252938 |
ttattctcttgaacctttctgctttttgattcccaaggacaagggaaaaagatatctattttatctcattacaaaaccacagtgtcattaggtggaaaag |
8253037 |
T |
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| Q |
215 |
tttcagttctctatgtctatatatgctgaaataggaa |
251 |
Q |
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| T |
8253038 |
tttcagttctctatgtctatatatgctgaaataggaa |
8253074 |
T |
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