View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1305_low_147 (Length: 233)
Name: NF1305_low_147
Description: NF1305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1305_low_147 |
 | |
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| [»] scaffold0225 (1 HSPs) |
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| [»] scaffold0162 (2 HSPs) |
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| [»] scaffold0076 (1 HSPs) |
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| [»] scaffold0302 (2 HSPs) |
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| [»] scaffold0266 (1 HSPs) |
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| [»] scaffold0124 (1 HSPs) |
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| [»] scaffold0077 (1 HSPs) |
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| [»] scaffold0022 (1 HSPs) |
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| [»] scaffold0387 (1 HSPs) |
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| [»] scaffold0218 (2 HSPs) |
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| [»] scaffold0170 (1 HSPs) |
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| [»] scaffold0008 (2 HSPs) |
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| [»] scaffold0467 (1 HSPs) |
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| [»] scaffold0876 (1 HSPs) |
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| [»] scaffold1488 (1 HSPs) |
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| [»] scaffold0561 (1 HSPs) |
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| [»] scaffold0369 (1 HSPs) |
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| [»] scaffold0120 (1 HSPs) |
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| [»] scaffold0092 (1 HSPs) |
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| [»] scaffold0692 (1 HSPs) |
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| [»] scaffold0610 (1 HSPs) |
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| [»] scaffold0021 (3 HSPs) |
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| [»] scaffold0462 (1 HSPs) |
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| [»] scaffold0635 (1 HSPs) |
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| [»] scaffold0719 (1 HSPs) |
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| [»] scaffold0585 (1 HSPs) |
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| [»] scaffold0083 (1 HSPs) |
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| [»] scaffold0827 (1 HSPs) |
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| [»] scaffold0730 (1 HSPs) |
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| [»] scaffold0029 (1 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0016 (1 HSPs) |
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| [»] scaffold0270 (2 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 16875725 - 16875595
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16875725 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
16875626 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
16875625 |
tagtgtccatacctcgttcggaacgcagttt |
16875595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 21848967 - 21848837
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21848967 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
21848868 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |
|
|
| T |
21848867 |
tagtgtccataccttgttcggaacgcagttt |
21848837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 22436454 - 22436584
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22436454 |
caccacaaaacggtccagataaggatgaaatattctattcatttattccattaagacacctggcgcattggatactccaaatggcatcacagaatactca |
22436553 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|| ||||||||||| ||||||||||| |||| |
|
|
| T |
22436554 |
tactgtccataccttgttcggaacgcggttt |
22436584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 92 - 214
Target Start/End: Complemental strand, 20650977 - 20650855
Alignment:
| Q |
92 |
aacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtcc |
191 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| || || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20650977 |
aacggtccagataaggataaaatattctattcatatactctatgaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtcc |
20650878 |
T |
|
| Q |
192 |
atacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||||| |||| |
|
|
| T |
20650877 |
atacctcgttcggaacgctgttt |
20650855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 92 - 214
Target Start/End: Original strand, 23902323 - 23902445
Alignment:
| Q |
92 |
aacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtcc |
191 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| |||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23902323 |
aacggtccagaaaaggatgaaatattctattcatatattccatgaagacacctagtgcattggatactccaaatggcatcacagaatactcatagtgtcc |
23902422 |
T |
|
| Q |
192 |
atacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|| ||||||| ||||||| |||| |
|
|
| T |
23902423 |
atgcctcgtttggaacgcggttt |
23902445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 23155670 - 23155542
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||||||| |||||||| ||||||||| ||||||| | | ||||||||||||||||||||||||| |
|
|
| T |
23155670 |
caccacaaaacggtccaaataaggatgaaatattctattcatatattccatgaagacacctagcgcattgggtgctccaaatggcatcacagaatactc- |
23155572 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||| |||| |
|
|
| T |
23155571 |
-agtgtccatacctcgttcggaacgcggttt |
23155542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 84 - 207
Target Start/End: Complemental strand, 21195169 - 21195047
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||| ||||||||||| |||||||| |||||||| |
|
|
| T |
21195169 |
caccacaaaacggtccagataaggatgaaatattctattcatatattccatgaagt-acctggcacattatatactccaaattgcatcacaaaatactca |
21195071 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaac |
207 |
Q |
| |
|
|||||||||||||| ||||||||| |
|
|
| T |
21195070 |
tagtgtccataccttgttcggaac |
21195047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 16414302 - 16414364
Alignment:
| Q |
144 |
tggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacctcgttcggaa |
206 |
Q |
| |
|
||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
16414302 |
tggcgcattggatattccaaatggcatcacagaatactcatagtgtccataccttgttcggaa |
16414364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 194
Target Start/End: Original strand, 19869866 - 19869954
Alignment:
| Q |
106 |
ggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccata |
194 |
Q |
| |
|
||||| || ||||| ||||| || |||||||| || |||||||| || || |||||||| |||||||| ||||||||||| || ||||| |
|
|
| T |
19869866 |
ggatggaaaattctgttcatatactccataaacactcctggcgcgttggacactccaaaaggcatcactgaatactcataatgaccata |
19869954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 207
Target Start/End: Complemental strand, 24631261 - 24631173
Alignment:
| Q |
119 |
tattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacctcgttcggaac |
207 |
Q |
| |
|
||||||||||||||||||| | ||| || |||||| || ||||||| ||| ||||||||||||||||| | |||||| |||| |||| |
|
|
| T |
24631261 |
tattcatgtattccataaataatcctagcacattagtcacaccaaatgacattacagaatactcatagtgactatacctagttcagaac |
24631173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 23887215 - 23887289
Alignment:
| Q |
120 |
attcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccata |
194 |
Q |
| |
|
||||||||| |||||||| ||| |||||||||||| || || || |||||||| |||||||| || |||||||| |
|
|
| T |
23887215 |
attcatgtactccataaacacatctggcgcattagtaacaccgaaaggcatcactgaatactcgtaatgtccata |
23887289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 127; Significance: 1e-65; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 16648301 - 16648171
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16648301 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
16648202 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
16648201 |
tagtgtccatacctcgttcggaacgcagttt |
16648171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 23998197 - 23998327
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23998197 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
23998296 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
23998297 |
tagtgtccatacctcgttcggaacgcagttt |
23998327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 1647146 - 1647016
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1647146 |
caccacaaaacggtccagataaggatgaaatattctattcatatattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
1647047 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
1647046 |
tagtgtccatacctcgttcggaacgcagttt |
1647016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 16380705 - 16380575
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
16380705 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca |
16380606 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
16380605 |
tagtgtccatacctcgttcggaacgcagttt |
16380575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 14130418 - 14130548
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||| ||||||||||||| |||||||||| |||||||| ||||||||| || |||| |||| |||||||| ||||||| |||||||| |
|
|
| T |
14130418 |
caccacaaaacggtccaaataaggatgaaatgttctattcatatattccatgaagacacctagcacattggataatccaaatgacatcacataatactca |
14130517 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||| ||||||||||||||| ||||| |||| |
|
|
| T |
14130518 |
tagtatccatacctcgttcgaaacgcggttt |
14130548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 208
Target Start/End: Original strand, 16099958 - 16100088
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataa------agacacctggcgcattagatactccaaatggcatcacagaa |
177 |
Q |
| |
|
||||||| ||||||||| ||| |||||||||||||||||||| || ||||||| ||||||||||| ||||||| |||||||||||||| ||| || |
|
|
| T |
16099958 |
caccacaaaacggtccaaatatggatgaaatattctattcatatactccataaagataaagacacctggcacattagacactccaaatggcattacataa |
16100057 |
T |
|
| Q |
178 |
tactcatagtgtccatacctcgttcggaacg |
208 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |
|
|
| T |
16100058 |
tactcatagtgtccatacctcgttcgtaacg |
16100088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 23026007 - 23025959
Alignment:
| Q |
155 |
atactccaaatggcatcacagaatactcatagtgtccatacctcgttcg |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23026007 |
atactccaaatggcatcacagaatactcatagtgtccatacctcgttcg |
23025959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 14643803 - 14643691
Alignment:
| Q |
97 |
tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacc |
196 |
Q |
| |
|
|||| ||||||||| || ||||||||||| |||||||| |||||||| |||||| || || |||||||||||||||||||| || |||||||||| | |
|
|
| T |
14643803 |
tccaaataaggatggaagattctattcatatattccatgaagacaccatgcgcatcagtaacaccaaatggcatcacagaata-tc--agtgtccatatc |
14643707 |
T |
|
| Q |
197 |
tcgttcggaacgcagt |
212 |
Q |
| |
|
| |||||||| ||||| |
|
|
| T |
14643706 |
tagttcggaatgcagt |
14643691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 127; Significance: 1e-65; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 24583209 - 24583339
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24583209 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
24583308 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
24583309 |
tagtgtccatacctcgttcggaacgcagttt |
24583339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 23507683 - 23507813
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
23507683 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca |
23507782 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
23507783 |
tagtgtccatacctcgttcggaacgcagttt |
23507813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 21935557 - 21935427
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
21935557 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca |
21935458 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |
|
|
| T |
21935457 |
tagtgtccataccttgttcggaacgcagttt |
21935427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 20250640 - 20250525
Alignment:
| Q |
97 |
tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacc |
196 |
Q |
| |
|
|||| ||||||||| || || |||||||| |||||||||||| ||||| | | |||| ||| ||||||||||| | | |||||||||| |||||||||| |
|
|
| T |
20250640 |
tccaaataaggatggaaaatcctattcatatattccataaagttacctgacacgttagttacaccaaatggcataataaaatactcataatgtccatacc |
20250541 |
T |
|
| Q |
197 |
tcgttcggaacgcagt |
212 |
Q |
| |
|
| ||||| |||||||| |
|
|
| T |
20250540 |
ttgttcgaaacgcagt |
20250525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 152
Target Start/End: Complemental strand, 21337627 - 21337595
Alignment:
| Q |
120 |
attcatgtattccataaagacacctggcgcatt |
152 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |
|
|
| T |
21337627 |
attcatgtattccataaacacacctggcgcatt |
21337595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 127; Significance: 1e-65; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 8272825 - 8272695
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8272825 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
8272726 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
8272725 |
tagtgtccatacctcgttcggaacgcagttt |
8272695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 13965778 - 13965648
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
13965778 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattggatactccaaatggcatcacagaatactca |
13965679 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
13965678 |
tagtgtccatacctcgttcggaacgcagttt |
13965648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 30139520 - 30139650
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
30139520 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca |
30139619 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
30139620 |
tagtgtccatacctcgttcggaacgcagttt |
30139650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 30149071 - 30149201
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
30149071 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca |
30149170 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
30149171 |
tagtgtccatacctcgttcggaacgcagttt |
30149201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 15611817 - 15611947
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
15611817 |
caccacaaaacggtccagataaggatgaaatattctattcatatattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca |
15611916 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
15611917 |
tagtgtccatacctcgttcggaacgcagttt |
15611947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 6151279 - 6151149
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||| |||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
6151279 |
caccacaaaacggtctagataaggatgaaatattttattcatatactccataaagacacctggcgcattagatactccaaatggcatcacaaaatactca |
6151180 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |
|
|
| T |
6151179 |
tagtgtccatacctcgttcggaacacagttt |
6151149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 15948896 - 15948766
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| | ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
15948896 |
caccacaaatcggtccaaataaggatgaaatattctattcatatattccataaagacacctggcgcattggatactccaaatggcatcacggaatactca |
15948797 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |
|
|
| T |
15948796 |
tagtgtccatacctcgttcggaacgcggttt |
15948766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 25768032 - 25768162
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||| |
|
|
| T |
25768032 |
caccacaaaacggtccagataaggatgaaatattctattcatatattccatgaagacacctggcgaattagatactccgaatggcatcacagaatactca |
25768131 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||| ||| ||||||| |||| |
|
|
| T |
25768132 |
tagtgtccataccttgtttggaacgcggttt |
25768162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0225 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0225
Description:
Target: scaffold0225; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 25510 - 25640
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
25510 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca |
25609 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
25610 |
tagtgtccatacctcgttcggaacgcagttt |
25640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0162 (Bit Score: 123; Significance: 2e-63; HSPs: 2)
Name: scaffold0162
Description:
Target: scaffold0162; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 15024 - 15154
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
15024 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca |
15123 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
15124 |
tagtgtccatacctcgttcggaacgcagttt |
15154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0162; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 11364 - 11242
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
11364 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagacactccaaatggcatcaaagaatactca |
11265 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaa |
206 |
Q |
| |
|
|||||||||||||| |||||||| |
|
|
| T |
11264 |
tagtgtccataccttgttcggaa |
11242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 123; Significance: 2e-63; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 7825974 - 7826104
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
7825974 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca |
7826073 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
7826074 |
tagtgtccatacctcgttcggaacgcagttt |
7826104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 27105970 - 27105840
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
27105970 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca |
27105871 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
27105870 |
tagtgtccatacctcgttcggaacgcagttt |
27105840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 27172355 - 27172485
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
27172355 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca |
27172454 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
27172455 |
tagtgtccatacctcgttcggaacgcagttt |
27172485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 17925724 - 17925854
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||| ||| |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
17925724 |
caccacaaaacggtctagaaaaggatgaaatattctattcatatattccatgaagacacctggcgcattggatactccaaatggcatcacagaatactca |
17925823 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||| |||| ||||| |||| |
|
|
| T |
17925824 |
tagtgtccatacctcattcgaaacgcggttt |
17925854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 94 - 214
Target Start/End: Original strand, 13378969 - 13379087
Alignment:
| Q |
94 |
cggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccat |
193 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13378969 |
cggtccagataaggatgaaatattctattcatatatttcatgaagacacctggcgcattggatactccaaatggcatcacagaatactc--agtgtccat |
13379066 |
T |
|
| Q |
194 |
acctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||| |||| |
|
|
| T |
13379067 |
acctcgttcggaacgcggttt |
13379087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 4442002 - 4442132
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||||| ||||||| |||||| ||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
4442002 |
caccacaaaacggtccagaaaaggatggaatattatattcatatattccatgaagacacctggcgcattggatactccgaatggcatcacagaatactct |
4442101 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||| ||||||||| |||||||| |||| |
|
|
| T |
4442102 |
tagtgttcatacctcgaccggaacgcggttt |
4442132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 207
Target Start/End: Original strand, 13458109 - 13458232
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||| ||| || ||||||| ||| |||||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||| |||||||| |
|
|
| T |
13458109 |
caccacaaaacgatcctgaaaaggatggaatgttctattcatatattccatgaagacacctggcgcattggatactccaaatgacatcacaaaatactca |
13458208 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaac |
207 |
Q |
| |
|
|||||||||||||| ||||||||| |
|
|
| T |
13458209 |
tagtgtccataccttgttcggaac |
13458232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 214
Target Start/End: Complemental strand, 15717088 - 15716969
Alignment:
| Q |
95 |
ggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccata |
194 |
Q |
| |
|
|||||||| ||||||| |||||||||||||| |||||||| ||||||| ||| |||||| || ||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
15717088 |
ggtccagaaaaggatggaatattctattcatatattccatgaagacactaggcacattagttagaccaaatggcattacagaatattcatagtgaccata |
15716989 |
T |
|
| Q |
195 |
cctcgttcggaacgcagttt |
214 |
Q |
| |
|
|| |||||||||||||||| |
|
|
| T |
15716988 |
tctagttcggaacgcagttt |
15716969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 17143459 - 17143354
Alignment:
| Q |
97 |
tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacc |
196 |
Q |
| |
|
|||| ||||||||| || ||||||||||| |||||||| |||||||| |||| ||||| || ||||||| |||| ||||||| |||||||||||||||| |
|
|
| T |
17143459 |
tccaaataaggatggaagattctattcatatattccatgaagacaccgggcgtattagtcacaccaaatgacatcgcagaatattcatagtgtccatacc |
17143360 |
T |
|
| Q |
197 |
tcgttc |
202 |
Q |
| |
|
|||||| |
|
|
| T |
17143359 |
tcgttc |
17143354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 12204961 - 12204904
Alignment:
| Q |
97 |
tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag |
154 |
Q |
| |
|
|||||||||| ||| || |||||||||||||| |||||||| ||||| |||||||||| |
|
|
| T |
12204961 |
tccagataagcatggaaaattctattcatgtactccataaacacaccaggcgcattag |
12204904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 194
Target Start/End: Complemental strand, 39320 - 39232
Alignment:
| Q |
106 |
ggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccata |
194 |
Q |
| |
|
||||| || ||||| ||||| || |||||||| || |||||||| || || |||||||| |||||||| ||||||||||| || ||||| |
|
|
| T |
39320 |
ggatggaaaattctgttcatatactccataaaaactcctggcgcgttggacactccaaaaggcatcaccgaatactcataatgaccata |
39232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 14262406 - 14262349
Alignment:
| Q |
97 |
tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag |
154 |
Q |
| |
|
|||||||||| ||| || ||||||||||| || |||||||| ||||| |||||||||| |
|
|
| T |
14262406 |
tccagataagcatggaaaattctattcatatactccataaacacaccaggcgcattag |
14262349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 194
Target Start/End: Complemental strand, 48813430 - 48813338
Alignment:
| Q |
102 |
ataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccata |
194 |
Q |
| |
|
||||| |||||| || | ||||||||| |||||||| |||| ||||||||||| || || || |||||||| ||||| || || |||||||| |
|
|
| T |
48813430 |
ataagcatgaaaaatacaattcatgtactccataaacacacttggcgcattagtaacaccgaaaggcatcactgaatattcgtaatgtccata |
48813338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 123; Significance: 2e-63; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 20829651 - 20829521
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
20829651 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca |
20829552 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
20829551 |
tagtgtccatacctcgttcggaacgcagttt |
20829521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 20927154 - 20927284
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20927154 |
caccacaaaactgtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
20927253 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |
|
|
| T |
20927254 |
tagtgtccatacctcgttcggaacgcggttt |
20927284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 20527153 - 20527275
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
20527153 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattctataaagacacctggtgcattagatactccaaatggcatcacagaatactca |
20527252 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaa |
206 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
20527253 |
tagtgtccatacctcgttcggaa |
20527275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 92 - 214
Target Start/End: Complemental strand, 41216107 - 41215985
Alignment:
| Q |
92 |
aacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtcc |
191 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| |||| ||| || |||||||||||||| |||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
41216107 |
aacggtccagaaaaggatgaaatattctattcatatattgcatgaaaacacctggcgcattggatactccaaatggcatcacagaatactcatagtttcc |
41216008 |
T |
|
| Q |
192 |
atacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||||| |||| |
|
|
| T |
41216007 |
atacctcgttcggaacgcggttt |
41215985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 99 - 214
Target Start/End: Complemental strand, 21201123 - 21201008
Alignment:
| Q |
99 |
cagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacctc |
198 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| ||||||| |||| ||||| || | |||||||||||||||||| |||||||| ||||| ||| |
|
|
| T |
21201123 |
cagataaggatgaaatattctattcatatattccatgaagacactcggcgtattagtcacactaaatggcatcacagaatattcatagtgaccatatctc |
21201024 |
T |
|
| Q |
199 |
gttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
21201023 |
gttcggaacgcagttt |
21201008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 22133963 - 22133897
Alignment:
| Q |
136 |
aagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacctcgttc |
202 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22133963 |
aagacacctggcgcattggatactccaaatggcatcacagaatactcatagtgtccatacctcgttc |
22133897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0076 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0076
Description:
Target: scaffold0076; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 42374 - 42504
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
42374 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctagcgcattagatactccaaatggcatcacaaaatactca |
42473 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
42474 |
tagtgtccatacctcgttcggaacgcagttt |
42504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 119; Significance: 6e-61; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 15291345 - 15291215
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15291345 |
caccacaaaatggtccagataaggatgaaatattttattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
15291246 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
15291245 |
tagtgtccatacctcgttcggaacgcagttt |
15291215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 85 - 214
Target Start/End: Complemental strand, 12341051 - 12340922
Alignment:
| Q |
85 |
accacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcat |
184 |
Q |
| |
|
|||||| ||| ||||||| ||||||| ||||| |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
12341051 |
accacaaaacagtccagaaaaggatggaatatcctattcatatattccatgaagacacctggcgcattagtcactccaaatggcatcacagaatactcat |
12340952 |
T |
|
| Q |
185 |
agtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||| || ||||||||||| |||| |
|
|
| T |
12340951 |
agtgtccattccctgttcggaacgcggttt |
12340922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 15323315 - 15323372
Alignment:
| Q |
97 |
tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag |
154 |
Q |
| |
|
|||||||||| ||| || ||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
15323315 |
tccagataagcatggaaaattctattcatgtattccataaacacaccaggcgcattag |
15323372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 14696235 - 14696308
Alignment:
| Q |
121 |
ttcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccata |
194 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| | || ||||| |||||||| ||||| | ||| |||||||| |
|
|
| T |
14696235 |
ttcatgtactccataaacacacctggcgcatttgtaacaccaaaaggcatcactgaatattaataatgtccata |
14696308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 15072457 - 15072514
Alignment:
| Q |
97 |
tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag |
154 |
Q |
| |
|
|||||||||| ||| || | |||||||||||| |||||||| ||||| |||||||||| |
|
|
| T |
15072457 |
tccagataagcatggaaaactctattcatgtactccataaacacaccaggcgcattag |
15072514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 119; Significance: 6e-61; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 24829915 - 24829785
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24829915 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
24829816 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||||||| ||||| |||| |
|
|
| T |
24829815 |
tagtgtccatacctcgttcgaaacgcggttt |
24829785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 22279821 - 22279951
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22279821 |
caccacaaaacggtccagataaggataaaatattctattcatgtattccataaagacacatggcgcattagatactccaaatggcatcacagaatactca |
22279920 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |
|
|
| T |
22279921 |
tagtgtccatacctcgttcggaacgctgttt |
22279951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 84 - 208
Target Start/End: Complemental strand, 24568395 - 24568271
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
24568395 |
caccacaaaacggtccagataaggatgaaatattctattcatatactccatgaagacacctgatgcattagatactccaaatggcatcacagaatactca |
24568296 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacg |
208 |
Q |
| |
|
|||||||||||||| ||| |||||| |
|
|
| T |
24568295 |
tagtgtccataccttgtttggaacg |
24568271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 25130325 - 25130455
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| | |||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
25130325 |
caccacaaagcggtccaggaaaggatgaaatattctattcatatattccaggaagacacctggcgcattggatactccaaatggcatcatagaatactca |
25130424 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |
|
|
| T |
25130425 |
tagtgtccatacctcgttcggaacgcggttt |
25130455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 22760296 - 22760183
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||| ||||||||||||||||||||||| || ||||| ||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22760296 |
caccacaaaacggtccaggtaaggatgaaatattctattcatatactccatgaagacacctagcgcatcggatactccaaatggcatcacagaatactca |
22760197 |
T |
|
| Q |
184 |
tagtgtccatacct |
197 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
22760196 |
tagtgtccatacct |
22760183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 10038046 - 10037929
Alignment:
| Q |
97 |
tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacc |
196 |
Q |
| |
|
|||| ||||||||| || |||||||||||||||||||| |||||||| ||||||||| || ||||||| ||||||| | || |||||||| ||||||| |
|
|
| T |
10038046 |
tccaaataaggatggaagattctattcatgtattccatgaagacaccaagcgcattagtcacaccaaatgacatcacaaagtattcatagtgcccatacc |
10037947 |
T |
|
| Q |
197 |
tcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||| || ||||||| |
|
|
| T |
10037946 |
tcgttcgaaatgcagttt |
10037929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 10098431 - 10098314
Alignment:
| Q |
97 |
tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacc |
196 |
Q |
| |
|
|||| ||||||||| || |||||||||||||||||||| |||||||| ||||||||| || ||||||| ||||||| | || |||||||| ||||||| |
|
|
| T |
10098431 |
tccaaataaggatggaagattctattcatgtattccatgaagacaccaagcgcattagtcacaccaaatgacatcacaaagtattcatagtgcccatacc |
10098332 |
T |
|
| Q |
197 |
tcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||| || ||||||| |
|
|
| T |
10098331 |
tcgttcgaaatgcagttt |
10098314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 23112465 - 23112522
Alignment:
| Q |
97 |
tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag |
154 |
Q |
| |
|
|||||||||| ||| || |||||||||||||| |||||||| |||| |||||||||| |
|
|
| T |
23112465 |
tccagataagcatggaaaattctattcatgtactccataaacacactaggcgcattag |
23112522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0302 (Bit Score: 115; Significance: 1e-58; HSPs: 2)
Name: scaffold0302
Description:
Target: scaffold0302; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 327 - 457
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
327 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaaaacacctggcgcattagatactccaaatgacatcacagaatactca |
426 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |
|
|
| T |
427 |
tagtgtccatacctcgttcggaacgcggttt |
457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0302; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 7269 - 7399
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
7269 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaaaacacctggcgcattagatactccaaatgacatcacagaatactca |
7368 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |
|
|
| T |
7369 |
tagtgtccatacctcgttcggaacgcggttt |
7399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0266 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0266
Description:
Target: scaffold0266; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 92 - 214
Target Start/End: Complemental strand, 8043 - 7921
Alignment:
| Q |
92 |
aacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtcc |
191 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8043 |
aacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactcatagtgtcc |
7944 |
T |
|
| Q |
192 |
atacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||||| |||| |
|
|
| T |
7943 |
atacctcgttcggaacgcggttt |
7921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0124 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0124
Description:
Target: scaffold0124; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 5998 - 5866
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattct-attcatgtattcca-taaagacacctggcgcattagatactccaaatggcatcacagaatact |
181 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5998 |
caccacaaaacggtccagataaggatgaaatattcttattcatgtatttcaataaagacacctggcgcattagatactccaaatggcatcacagaatact |
5899 |
T |
|
| Q |
182 |
catagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
5898 |
catagtgtccatacctcgttcggaacgcagttt |
5866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0077 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0077
Description:
Target: scaffold0077; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 26456 - 26326
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
26456 |
caccacaaaacggtccagataaggatgaaatactctattcatgcattccagaaagacacctggcgcattagatactccaaatggcatcacaaaatactca |
26357 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |
|
|
| T |
26356 |
tagtgtccatacctcgttcggaacgcggttt |
26326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 9013 - 8886
Alignment:
| Q |
87 |
cacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatag |
186 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9013 |
cacaaaacgatccagataaggatgaaatattctattcatgtatcccataaagacacctggtgcattagatactccaaatggcatcacagaatactcatag |
8914 |
T |
|
| Q |
187 |
tgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||| ||||| |||| |
|
|
| T |
8913 |
tgtccatacctcgttcgaaacgcggttt |
8886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0387 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0387
Description:
Target: scaffold0387; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 16174 - 16304
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
16174 |
caccacaaaacggtccagataaggttgaaatattctattcatgtattccatgaagacacctgacgcattggatactcaaaatggcatcacagaatactca |
16273 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |
|
|
| T |
16274 |
tagtgtccatacctcgttcggaacgcggttt |
16304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0218 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0218
Description:
Target: scaffold0218; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 2142 - 2020
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
2142 |
caccacaaaatggtccagataaggatgaaatattctattcatttattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca |
2043 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaa |
206 |
Q |
| |
|
||||||| ||||||||||||||| |
|
|
| T |
2042 |
tagtgtctatacctcgttcggaa |
2020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0218; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 26443 - 26565
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
26443 |
caccacaaaacggtccagaaaaggatgaaatattctattcatatattccatgaagacacctggcgcattagatactctaaatgacatcacagaatactca |
26542 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaa |
206 |
Q |
| |
|
|||||||||||||| |||||||| |
|
|
| T |
26543 |
tagtgtccataccttgttcggaa |
26565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0170 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0170
Description:
Target: scaffold0170; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 34201 - 34331
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
34201 |
caccacaaaacggtccagataaggatgaaatattctattcatatactccatgaagacacctggcgcattggatactccaaatggcatcacagaatactca |
34300 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||||||| ||||| |||| |
|
|
| T |
34301 |
tagtgtccatacctcgttcgaaacgcggttt |
34331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 132679 - 132549
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
132679 |
caccacaaaacagtccagataaggataaaatattctattcatgtattccataaagacaccgggcgcattagatactccaaatggcatcacagagtactca |
132580 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||| |||||||||||||| |||| |
|
|
| T |
132579 |
tagtgtccatatctcgttcggaacgcggttt |
132549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 25938 - 26008
Alignment:
| Q |
139 |
acacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacctcgttcggaacgc |
209 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
25938 |
acacctggcgcattgcatactctaaatggcatcacagaatactcatagtgtccatacttcgtttggaacgc |
26008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0467 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0467
Description:
Target: scaffold0467; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 1811 - 1681
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| || ||||||||| |
|
|
| T |
1811 |
caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattggaaactccaaatggcattacggaatactca |
1712 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||| ||||||||| ||||||||||| |||| |
|
|
| T |
1711 |
tagtttccataccttgttcggaacgcggttt |
1681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0876 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0876
Description:
Target: scaffold0876; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 92 - 207
Target Start/End: Complemental strand, 1128 - 1013
Alignment:
| Q |
92 |
aacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtcc |
191 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
1128 |
aacggtccagataaggatgaaatattctattcatatattccatgaagatacctggcgcattggatactgcaaatggcatcacagaatactcatagtgtcc |
1029 |
T |
|
| Q |
192 |
atacctcgttcggaac |
207 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
1028 |
atacctcgttcggaac |
1013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1488 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold1488
Description:
Target: scaffold1488; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 993 - 863
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| || |||||| |||||||||||||||||||||||| |||||||| |||||| |||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
993 |
caccacaaaatggtccaaataaggatgaaatattctattcatatattccatgaagacaactggcgcattggatactccaaatggcatcacagaatactca |
894 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||| ||||||||||||||||| |||||| |
|
|
| T |
893 |
tagtgttcatacctcgttcggaacacagttt |
863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0561 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0561
Description:
Target: scaffold0561; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 7195 - 7065
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| ||||||||||||||||||||||||||| || |
|
|
| T |
7195 |
caccacaaaacggtccatataaggatgaaatattctattcatatattccatgaagatacctggcgcattggatactccaaatggcatcacagaataccca |
7096 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||||| ||||||| |||| |
|
|
| T |
7095 |
tagtgtccatacctcgtttggaacgctgttt |
7065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0369 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0369
Description:
Target: scaffold0369; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 6888 - 6990
Alignment:
| Q |
112 |
aatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacctcgttcggaacgcag |
211 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
6888 |
aatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactcatagtgtccatacctcgttcggaacgaag |
6987 |
T |
|
| Q |
212 |
ttt |
214 |
Q |
| |
|
||| |
|
|
| T |
6988 |
ttt |
6990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0120 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0120
Description:
Target: scaffold0120; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 24292 - 24422
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| || |||| |||||||||| ||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
24292 |
caccacaaaacggtccagataaggatgaaatattctattcatatactccacaaagacacctagcgcattcgatactccaaatggcatcacagcatactca |
24391 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||| ||||||||||| |||| |
|
|
| T |
24392 |
tagtgtccataccttgttcggaacgcggttt |
24422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0092 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0092
Description:
Target: scaffold0092; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 84 - 209
Target Start/End: Original strand, 223 - 348
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||| || ||||||||||||||||||||||||||| || || || |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
223 |
caccacaaaacagtacagataaggatgaaatattctattcatatactctatgaagacacctggcgcattagatactccaaatggcatcacagaatactca |
322 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgc |
209 |
Q |
| |
|
|||||||||||||| ||||||||||| |
|
|
| T |
323 |
tagtgtccataccttgttcggaacgc |
348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0692 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0692
Description:
Target: scaffold0692; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 2074 - 1944
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||||||| || ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
2074 |
caccacaaaacagtccagataaggatgaaatattctattcatatactccatgaagacacctggtgcattagatactccaaatggcatcaccgaatactca |
1975 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||| || |||||| |||| |
|
|
| T |
1974 |
tagtgtccatacctcgatcagaacgcggttt |
1944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0610 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0610
Description:
Target: scaffold0610; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 92 - 214
Target Start/End: Complemental strand, 7111 - 6989
Alignment:
| Q |
92 |
aacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtcc |
191 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| || || || ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7111 |
aacggtccagataaggatgaaatattttattcatatactcaatgaagacacctggtgcattggatactccaaatggcatcacagaatactcatagtgtcc |
7012 |
T |
|
| Q |
192 |
atacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||||| |||| |
|
|
| T |
7011 |
atacctcgttcggaacgctgttt |
6989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021 (Bit Score: 91; Significance: 3e-44; HSPs: 3)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 22037 - 21907
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||||| ||||||||||||| |||||||| |
|
|
| T |
22037 |
caccacaaaacagtccagataaggatgaaatattctattcatatattccatgaagacacctggtgcattggatactttaaatggcatcacataatactca |
21938 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |
|
|
| T |
21937 |
tagtgtccatacctcgttcggaacgcggttt |
21907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 31613 - 31483
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||||| ||||||||||||| |||||||| |
|
|
| T |
31613 |
caccacaaaacagtccagataaggatgaaatattctattcatatattccatgaagacacctggtgcattggatactttaaatggcatcacataatactca |
31514 |
T |
|
| Q |
184 |
tagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |
|
|
| T |
31513 |
tagtgtccatacctcgttcggaacgcggttt |
31483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 7330 - 7438
Alignment:
| Q |
84 |
caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca |
183 |
Q |
| |
|
||||||| |||||| ||||||||||||||||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
7330 |
caccacaaaacggttcagataaggatgaaatattatattcatatactccatgaagacacctggcgcattagatactccaaatggcatcacataatactca |
7429 |
T |
|
| Q |
184 |
tagtgtcca |
192 |
Q |
| |
|
||||||||| |
|
|
| T |
7430 |
tagtgtcca |
7438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0462 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0462
Description:
Target: scaffold0462; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 146 - 214
Target Start/End: Original strand, 2117 - 2185
Alignment:
| Q |
146 |
gcgcattagatactccaaatggcatcacagaatactcatagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
2117 |
gcgcattagatactccaaatggcatcacataatactcatagtgtccatacctcgttcggaacacagttt |
2185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0635 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0635
Description:
Target: scaffold0635; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 214
Target Start/End: Original strand, 9024 - 9141
Alignment:
| Q |
97 |
tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacc |
196 |
Q |
| |
|
|||| ||||||||| || |||||||||||||||||||| |||||||| ||||||||| || ||||||| ||||||| | || |||||||| ||||||| |
|
|
| T |
9024 |
tccaaataaggatggaagattctattcatgtattccatgaagacaccaagcgcattagtcacaccaaatgacatcacaaagtattcatagtgcccatacc |
9123 |
T |
|
| Q |
197 |
tcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||| || ||||||| |
|
|
| T |
9124 |
tcgttcgaaatgcagttt |
9141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0719 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0719
Description:
Target: scaffold0719; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 4785 - 4833
Alignment:
| Q |
166 |
ggcatcacagaatactcatagtgtccatacctcgttcggaacgcagttt |
214 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4785 |
ggcatcatagaatactcatagtgtccatacctcgttcggaacgcggttt |
4833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0585 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0585
Description:
Target: scaffold0585; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 5266 - 5209
Alignment:
| Q |
97 |
tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag |
154 |
Q |
| |
|
|||||||||| ||| || |||||||||||||| |||||||| ||||| |||||||||| |
|
|
| T |
5266 |
tccagataagcatggaaaattctattcatgtactccataaacacaccaggcgcattag |
5209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 194
Target Start/End: Complemental strand, 9188 - 9114
Alignment:
| Q |
120 |
attcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccata |
194 |
Q |
| |
|
||||||||| |||||||| |||||||||||||| | || || || |||||||| ||||| ||||| |||||||| |
|
|
| T |
9188 |
attcatgtactccataaacacacctggcgcatttgtaacaccgaaaggcatcactgaatattcataatgtccata |
9114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0827 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0827
Description:
Target: scaffold0827; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 5259 - 5332
Alignment:
| Q |
121 |
ttcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccata |
194 |
Q |
| |
|
||||| || |||||||| || |||||||| || || |||||||| |||||||| ||||||||||| || ||||| |
|
|
| T |
5259 |
ttcatatactccataaacactcctggcgcgttggacactccaaaaggcatcaccgaatactcataatgaccata |
5332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0730 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0730
Description:
Target: scaffold0730; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 178 - 121
Alignment:
| Q |
97 |
tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag |
154 |
Q |
| |
|
|||||||||| |||||| ||||||||||| || ||||| || ||||| |||||||||| |
|
|
| T |
178 |
tccagataagcatgaaaaattctattcatatactccatgaacacaccaggcgcattag |
121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 114688 - 114745
Alignment:
| Q |
97 |
tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag |
154 |
Q |
| |
|
||||| |||| |||||| ||||||||||| |||||||| || ||||| |||||||||| |
|
|
| T |
114688 |
tccaggtaagcatgaaaaattctattcatatattccatgaacacaccaggcgcattag |
114745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 50939 - 50996
Alignment:
| Q |
97 |
tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag |
154 |
Q |
| |
|
|||||||| | |||||| ||||||||||| || |||||||| ||||| |||||||||| |
|
|
| T |
50939 |
tccagataggcatgaaaaattctattcatatactccataaacacaccaggcgcattag |
50996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 176521 - 176464
Alignment:
| Q |
97 |
tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag |
154 |
Q |
| |
|
|||| ||||| ||| || |||||||||||||| |||||||| ||||| |||||||||| |
|
|
| T |
176521 |
tccaaataagcatggaaaattctattcatgtactccataaacacaccaggcgcattag |
176464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0270 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0270
Description:
Target: scaffold0270; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 152
Target Start/End: Original strand, 6023 - 6055
Alignment:
| Q |
120 |
attcatgtattccataaagacacctggcgcatt |
152 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |
|
|
| T |
6023 |
attcatgtattccataaacacacctggcgcatt |
6055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0270; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 152
Target Start/End: Original strand, 13153 - 13185
Alignment:
| Q |
120 |
attcatgtattccataaagacacctggcgcatt |
152 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |
|
|
| T |
13153 |
attcatgtattccataaacacacctggcgcatt |
13185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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