View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1305_low_154 (Length: 223)
Name: NF1305_low_154
Description: NF1305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1305_low_154 |
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Alignment Details
Target: chr5 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 48 - 207
Target Start/End: Original strand, 883732 - 883891
Alignment:
| Q |
48 |
ttcataggctaaatgctaactaacctcttggtagaatttggagagtctttttacgtcggtggactctcgagctatatggttcagactcactccttctgct |
147 |
Q |
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| T |
883732 |
ttcataggttaaatgctaactaacctcttggtagaatttggagagtctttttacgtcggtggactctcgagctatatggttcagactcactccttctgct |
883831 |
T |
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| Q |
148 |
gcagccatttcttctatcttttctagagaaaatatttctattgatttggaaacaataatg |
207 |
Q |
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| T |
883832 |
gcagccatttcttctatcttttctagagaaaatatttctattgatttggaaacaataatg |
883891 |
T |
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