View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1305_low_89 (Length: 324)

Name: NF1305_low_89
Description: NF1305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1305_low_89
NF1305_low_89
[»] chr6 (46 HSPs)
chr6 (84-324)||(4452721-4452961)
chr6 (84-324)||(28978224-28978464)
chr6 (101-313)||(27038353-27038558)
chr6 (101-313)||(27066692-27066897)
chr6 (185-324)||(29543486-29543625)
chr6 (185-324)||(29558896-29559035)
chr6 (185-324)||(31544687-31544826)
chr6 (127-324)||(27479041-27479233)
chr6 (127-324)||(27494295-27494487)
chr6 (185-322)||(29566965-29567101)
chr6 (185-322)||(29582372-29582508)
chr6 (203-324)||(29495377-29495498)
chr6 (203-324)||(29510715-29510836)
chr6 (185-324)||(34455142-34455283)
chr6 (185-324)||(34469430-34469571)
chr6 (202-313)||(4519372-4519484)
chr6 (202-313)||(4534559-4534671)
chr6 (101-322)||(16683371-16683587)
chr6 (202-313)||(26107234-26107345)
chr6 (202-313)||(26122466-26122577)
chr6 (127-324)||(26783052-26783246)
chr6 (127-324)||(26795024-26795218)
chr6 (101-322)||(16668089-16668305)
chr6 (185-323)||(27620099-27620236)
chr6 (185-323)||(27635709-27635846)
chr6 (101-321)||(27191651-27191859)
chr6 (101-321)||(27203504-27203712)
chr6 (101-321)||(27245519-27245727)
chr6 (101-321)||(27257382-27257590)
chr6 (202-324)||(27001753-27001877)
chr6 (202-324)||(27017259-27017383)
chr6 (130-321)||(16996920-16997106)
chr6 (231-324)||(4767048-4767141)
chr6 (231-324)||(4786022-4786115)
chr6 (193-320)||(2650959-2651083)
chr6 (231-324)||(4753496-4753589)
chr6 (231-324)||(4782203-4782296)
chr6 (254-324)||(16563665-16563735)
chr6 (130-321)||(27212039-27212225)
chr6 (130-321)||(27237003-27237189)
chr6 (130-321)||(27308331-27308517)
chr6 (84-141)||(31540060-31540117)
chr6 (228-319)||(18939181-18939273)
chr6 (202-305)||(7986644-7986747)
chr6 (202-305)||(30548787-30548890)
chr6 (202-305)||(30564051-30564154)
[»] scaffold0289 (1 HSPs)
scaffold0289 (84-324)||(16535-16775)
[»] chr4 (27 HSPs)
chr4 (84-324)||(14750298-14750538)
chr4 (84-324)||(14769401-14769641)
chr4 (96-324)||(36321118-36321336)
chr4 (96-324)||(36335327-36335545)
chr4 (96-324)||(36350417-36350635)
chr4 (176-324)||(20329250-20329401)
chr4 (176-324)||(20336279-20336430)
chr4 (185-324)||(43150494-43150633)
chr4 (101-313)||(18791425-18791630)
chr4 (101-313)||(18806053-18806258)
chr4 (130-321)||(34195121-34195315)
chr4 (178-324)||(19367260-19367405)
chr4 (203-314)||(33664601-33664711)
chr4 (203-314)||(33683413-33683523)
chr4 (162-324)||(762909-763070)
chr4 (203-314)||(30747814-30747925)
chr4 (203-314)||(30763119-30763230)
chr4 (231-314)||(33675760-33675843)
chr4 (254-324)||(5703889-5703959)
chr4 (254-324)||(48916392-48916462)
chr4 (203-314)||(54827516-54827627)
chr4 (203-314)||(54842743-54842854)
chr4 (202-314)||(14728510-14728622)
chr4 (202-305)||(21963775-21963878)
chr4 (202-305)||(21979025-21979128)
chr4 (257-321)||(35058355-35058420)
chr4 (203-314)||(4565362-4565474)
[»] chr3 (55 HSPs)
chr3 (84-324)||(18283184-18283424)
chr3 (84-324)||(18298485-18298725)
chr3 (84-324)||(18313786-18314026)
chr3 (101-313)||(48459836-48460046)
chr3 (101-313)||(48475595-48475805)
chr3 (101-321)||(47197269-47197482)
chr3 (202-313)||(51776196-51776308)
chr3 (202-313)||(51791282-51791394)
chr3 (193-324)||(22119672-22119803)
chr3 (203-324)||(18252020-18252141)
chr3 (176-322)||(26427153-26427299)
chr3 (176-322)||(10387979-10388126)
chr3 (207-313)||(28106851-28106956)
chr3 (207-313)||(28122087-28122192)
chr3 (185-324)||(26680650-26680791)
chr3 (185-321)||(5709432-5709570)
chr3 (185-321)||(5720342-5720480)
chr3 (185-321)||(5731245-5731383)
chr3 (185-321)||(5760985-5761123)
chr3 (176-322)||(10405353-10405499)
chr3 (203-314)||(16401267-16401377)
chr3 (193-324)||(6226414-6226544)
chr3 (207-313)||(5007714-5007819)
chr3 (207-313)||(5022973-5023078)
chr3 (193-324)||(22491254-22491383)
chr3 (202-324)||(28348405-28348529)
chr3 (228-322)||(50140169-50140261)
chr3 (250-324)||(5600221-5600295)
chr3 (250-324)||(5615462-5615536)
chr3 (217-321)||(17903524-17903630)
chr3 (231-324)||(6533571-6533664)
chr3 (231-324)||(6547402-6547495)
chr3 (202-324)||(28333303-28333427)
chr3 (206-314)||(24322168-24322275)
chr3 (206-314)||(24337520-24337627)
chr3 (176-324)||(8205784-8205931)
chr3 (193-320)||(43716695-43716819)
chr3 (256-324)||(18236716-18236784)
chr3 (188-324)||(8220965-8221100)
chr3 (130-321)||(29139523-29139710)
chr3 (130-321)||(29154328-29154515)
chr3 (84-134)||(16065062-16065112)
chr3 (202-305)||(17975528-17975631)
chr3 (202-305)||(17991076-17991179)
chr3 (202-305)||(18219215-18219318)
chr3 (202-305)||(18234523-18234626)
chr3 (84-134)||(19441933-19441983)
chr3 (96-219)||(22769030-22769147)
chr3 (202-311)||(29656454-29656563)
chr3 (202-311)||(29671098-29671207)
chr3 (216-321)||(26684566-26684674)
chr3 (96-218)||(47017578-47017692)
chr3 (96-218)||(47032492-47032606)
chr3 (203-251)||(18217817-18217865)
chr3 (101-161)||(3065479-3065536)
[»] scaffold0182 (1 HSPs)
scaffold0182 (84-314)||(3056-3287)
[»] chr2 (42 HSPs)
chr2 (84-314)||(27114729-27114957)
chr2 (84-314)||(27125694-27125922)
chr2 (101-313)||(31473184-31473390)
chr2 (193-322)||(34281033-34281160)
chr2 (101-313)||(34183953-34184158)
chr2 (162-324)||(16962999-16963160)
chr2 (185-324)||(34801823-34801963)
chr2 (176-324)||(39042665-39042814)
chr2 (176-324)||(39057999-39058148)
chr2 (185-322)||(12707370-12707506)
chr2 (185-322)||(12722770-12722906)
chr2 (96-324)||(35762860-35763080)
chr2 (176-321)||(37942671-37942819)
chr2 (185-321)||(27797852-27797989)
chr2 (185-321)||(27812941-27813078)
chr2 (177-321)||(34273379-34273521)
chr2 (177-321)||(34300386-34300528)
chr2 (231-324)||(10985457-10985550)
chr2 (185-321)||(16159846-16159984)
chr2 (185-321)||(16170747-16170885)
chr2 (207-313)||(19407333-19407438)
chr2 (207-313)||(19422333-19422438)
chr2 (162-321)||(15707180-15707336)
chr2 (250-324)||(19551747-19551821)
chr2 (230-322)||(22918986-22919076)
chr2 (230-322)||(22932096-22932186)
chr2 (130-321)||(13819891-13820077)
chr2 (195-324)||(37369180-37369307)
chr2 (195-324)||(37387014-37387141)
chr2 (185-322)||(5799735-5799874)
chr2 (84-141)||(13063616-13063673)
chr2 (84-134)||(26621850-26621900)
chr2 (202-314)||(251337-251449)
chr2 (202-314)||(266867-266979)
chr2 (202-305)||(16820168-16820271)
chr2 (202-305)||(16875390-16875493)
chr2 (202-305)||(32043868-32043971)
chr2 (202-305)||(32059064-32059167)
chr2 (96-218)||(37919624-37919738)
chr2 (96-218)||(37934562-37934676)
chr2 (203-302)||(13927447-13927547)
chr2 (203-302)||(13942643-13942743)
[»] scaffold1816 (1 HSPs)
scaffold1816 (84-320)||(966-1198)
[»] chr5 (52 HSPs)
chr5 (193-324)||(12056596-12056725)
chr5 (130-324)||(29892793-29892980)
chr5 (101-313)||(43072205-43072410)
chr5 (101-313)||(43087492-43087697)
chr5 (176-321)||(42136897-42137040)
chr5 (130-321)||(27282521-27282716)
chr5 (130-321)||(26772282-26772478)
chr5 (185-324)||(24786216-24786356)
chr5 (101-322)||(18491409-18491626)
chr5 (101-322)||(18506724-18506941)
chr5 (176-324)||(28643147-28643296)
chr5 (176-324)||(28658552-28658701)
chr5 (202-313)||(6868456-6868568)
chr5 (202-313)||(6883580-6883692)
chr5 (204-324)||(28572570-28572689)
chr5 (207-313)||(32587037-32587142)
chr5 (207-313)||(32605466-32605571)
chr5 (185-322)||(13433346-13433484)
chr5 (185-322)||(13444240-13444378)
chr5 (127-324)||(2504959-2505152)
chr5 (127-324)||(2520279-2520472)
chr5 (193-322)||(24675395-24675523)
chr5 (193-322)||(24717922-24718050)
chr5 (193-322)||(24733382-24733510)
chr5 (231-324)||(15749683-15749776)
chr5 (231-324)||(15764911-15765004)
chr5 (127-314)||(37677470-37677651)
chr5 (177-321)||(15649499-15649641)
chr5 (177-321)||(15664875-15665017)
chr5 (176-324)||(28912352-28912502)
chr5 (176-324)||(28927620-28927770)
chr5 (228-322)||(30143829-30143921)
chr5 (228-322)||(30177879-30177971)
chr5 (127-314)||(37662187-37662368)
chr5 (176-314)||(37726052-37726194)
chr5 (228-322)||(5632153-5632245)
chr5 (130-321)||(42065343-42065530)
chr5 (228-322)||(5647027-5647119)
chr5 (84-134)||(7814728-7814778)
chr5 (84-134)||(34498496-34498546)
chr5 (257-321)||(37649574-37649638)
chr5 (202-305)||(33510440-33510543)
chr5 (202-305)||(33525703-33525806)
chr5 (271-314)||(13315484-13315527)
chr5 (271-314)||(13330811-13330854)
chr5 (185-314)||(31425467-31425593)
chr5 (185-314)||(31440805-31440931)
chr5 (96-218)||(32597640-32597754)
chr5 (202-305)||(29973082-29973185)
chr5 (202-305)||(30023458-30023561)
chr5 (202-305)||(30038722-30038825)
chr5 (101-161)||(23395953-23396010)
[»] scaffold0336 (1 HSPs)
scaffold0336 (176-324)||(2342-2489)
[»] chr1 (15 HSPs)
chr1 (176-322)||(30728139-30728285)
chr1 (231-324)||(28579044-28579137)
chr1 (231-324)||(28594470-28594563)
chr1 (185-324)||(36507153-36507291)
chr1 (176-324)||(16671362-16671512)
chr1 (203-314)||(47200997-47201108)
chr1 (207-313)||(41784176-41784281)
chr1 (207-313)||(41799444-41799549)
chr1 (228-322)||(14893771-14893863)
chr1 (231-314)||(47353856-47353939)
chr1 (250-324)||(10937586-10937660)
chr1 (250-324)||(10956777-10956851)
chr1 (250-324)||(10972000-10972074)
chr1 (139-314)||(47766552-47766717)
chr1 (84-134)||(4148826-4148876)
[»] chr8 (24 HSPs)
chr8 (176-324)||(28352888-28353035)
chr8 (176-324)||(28368073-28368220)
chr8 (185-324)||(19510059-19510199)
chr8 (202-313)||(19199256-19199368)
chr8 (202-313)||(19214311-19214423)
chr8 (185-322)||(3338401-3338539)
chr8 (101-321)||(4487105-4487316)
chr8 (127-314)||(6053901-6054082)
chr8 (196-314)||(44570279-44570397)
chr8 (193-320)||(40008524-40008648)
chr8 (191-304)||(31349974-31350090)
chr8 (191-304)||(31363774-31363890)
chr8 (243-321)||(3987969-3988047)
chr8 (257-324)||(4818640-4818707)
chr8 (84-141)||(30368621-30368678)
chr8 (84-134)||(29035406-29035456)
chr8 (84-133)||(22141952-22142001)
chr8 (84-134)||(14551471-14551521)
chr8 (84-134)||(14572295-14572345)
chr8 (84-134)||(16255967-16256017)
chr8 (84-134)||(18788108-18788158)
chr8 (202-305)||(31480641-31480744)
chr8 (202-305)||(31495787-31495890)
chr8 (127-161)||(44570212-44570246)
[»] chr7 (31 HSPs)
chr7 (185-324)||(5138004-5138146)
chr7 (185-324)||(5151277-5151419)
chr7 (185-313)||(26696110-26696237)
chr7 (176-313)||(4273598-4273737)
chr7 (204-324)||(16161171-16161291)
chr7 (185-322)||(26522101-26522237)
chr7 (202-313)||(4136105-4136217)
chr7 (202-313)||(4151031-4151143)
chr7 (218-313)||(26265631-26265726)
chr7 (218-313)||(26325663-26325758)
chr7 (207-313)||(32999245-32999350)
chr7 (228-322)||(26660683-26660775)
chr7 (228-322)||(26675876-26675968)
chr7 (228-322)||(26686013-26686105)
chr7 (228-322)||(26689554-26689646)
chr7 (127-324)||(17241669-17241862)
chr7 (176-314)||(11027811-11027953)
chr7 (217-321)||(23832416-23832522)
chr7 (217-321)||(39351651-39351757)
chr7 (228-322)||(31119103-31119195)
chr7 (228-322)||(31133278-31133370)
chr7 (84-134)||(39149425-39149475)
chr7 (84-131)||(6224299-6224346)
chr7 (202-314)||(26498868-26498980)
chr7 (202-314)||(26599049-26599161)
chr7 (84-134)||(18136039-18136089)
chr7 (96-218)||(45381495-45381609)
chr7 (96-218)||(45396350-45396464)
chr7 (84-162)||(10833970-10834046)
chr7 (84-162)||(11435708-11435784)
chr7 (84-162)||(11449967-11450043)
[»] scaffold0131 (1 HSPs)
scaffold0131 (130-314)||(23635-23821)
[»] scaffold1629 (1 HSPs)
scaffold1629 (177-324)||(924-1071)
[»] scaffold0250 (1 HSPs)
scaffold0250 (96-321)||(299-517)
[»] scaffold0166 (1 HSPs)
scaffold0166 (185-324)||(28599-28739)
[»] scaffold0418 (1 HSPs)
scaffold0418 (185-324)||(15381-15522)
[»] scaffold0350 (1 HSPs)
scaffold0350 (207-313)||(13310-13415)
[»] scaffold1179 (1 HSPs)
scaffold1179 (185-322)||(1449-1588)
[»] scaffold0603 (2 HSPs)
scaffold0603 (196-324)||(336-464)
scaffold0603 (127-161)||(499-533)
[»] scaffold0159 (1 HSPs)
scaffold0159 (228-322)||(16713-16805)
[»] scaffold0252 (1 HSPs)
scaffold0252 (139-321)||(1604-1777)
[»] scaffold0062 (1 HSPs)
scaffold0062 (162-321)||(56092-56248)
[»] scaffold1760 (1 HSPs)
scaffold1760 (206-304)||(962-1059)
[»] scaffold0184 (1 HSPs)
scaffold0184 (243-321)||(25169-25247)
[»] scaffold0078 (1 HSPs)
scaffold0078 (243-321)||(47597-47675)
[»] scaffold1803 (1 HSPs)
scaffold1803 (203-322)||(875-993)
[»] scaffold1536 (1 HSPs)
scaffold1536 (101-305)||(476-670)
[»] scaffold0279 (1 HSPs)
scaffold0279 (96-219)||(9319-9435)
[»] scaffold0089 (1 HSPs)
scaffold0089 (84-134)||(23878-23928)
[»] scaffold0008 (1 HSPs)
scaffold0008 (84-134)||(226079-226129)
[»] scaffold0045 (1 HSPs)
scaffold0045 (114-218)||(91809-91905)
[»] scaffold0029 (1 HSPs)
scaffold0029 (257-321)||(6304-6368)
[»] scaffold0027 (1 HSPs)
scaffold0027 (202-305)||(130442-130545)
[»] scaffold0143 (1 HSPs)
scaffold0143 (84-162)||(13119-13195)


Alignment Details
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 84 - 324
Target Start/End: Original strand, 4452721 - 4452961
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataa 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  4452721 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacgtcaggtaaaactcagaacagaattccttttcgaaaataa 4452820  T
Q  184 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4452821 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctagatcca 4452920  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4452921 taaggatctaagttttgaaagcaagaacaagtaccagaaaa 4452961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 84 - 324
Target Start/End: Complemental strand, 28978464 - 28978224
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataa 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  28978464 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacgtcaggtaaaactcagaacagaattccttttcgaaaataa 28978365  T
Q  184 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28978364 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctagatcca 28978265  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  28978264 taaggatctaagttttgaaagcaagaacaagtaccagaaaa 28978224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 101 - 313
Target Start/End: Original strand, 27038353 - 27038558
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcga-aaataatatcatagtttaaacc 199  Q
    |||| ||||||||||||| ||| ||||||||||| | ||||||| |||||||||||||||||      ||||||| | |||| | |||||||||||||||    
T  27038353 caagcgtttccgaagaaactcaacagaatctcca-taaaaaact-caggtaaaactcagaacc-----tcttttcaacaaatgaaatcatagtttaaacc 27038445  T
Q  200 tgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagtttt 299  Q
    ||||||||| |||||||||| |||||| ||||||||||||| ||||||| ||| ||||||||||||| ||||||||| ||||||||||||||||||||||    
T  27038446 tgtaaaaattacgcaagcaa-cagatccaaaatttccagaactcaaagacaaaaccgtaaccgtaaatacaaaacctagatccataaggatctaagtttt 27038544  T
Q  300 gaaagcaagaacaa 313  Q
    ||||||||||||||    
T  27038545 gaaagcaagaacaa 27038558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 101 - 313
Target Start/End: Original strand, 27066692 - 27066897
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcga-aaataatatcatagtttaaacc 199  Q
    |||| ||||||||||||| ||| ||||||||||| | ||||||| |||||||||||||||||      ||||||| | |||| | |||||||||||||||    
T  27066692 caagcgtttccgaagaaactcaacagaatctcca-taaaaaact-caggtaaaactcagaacc-----tcttttcaacaaatgaaatcatagtttaaacc 27066784  T
Q  200 tgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagtttt 299  Q
    ||||||||| |||||||||| |||||| ||||||| ||||| ||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  27066785 tgtaaaaattacgcaagcaa-cagatccaaaattttcagaactcaaagacaaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagtttt 27066883  T
Q  300 gaaagcaagaacaa 313  Q
    ||||||||||||||    
T  27066884 gaaagcaagaacaa 27066897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 185 - 324
Target Start/End: Original strand, 29543486 - 29543625
Alignment:
Q  185 atcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    |||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  29543486 atcacagtttaaacccgtaaaa-tcacgcaagcaaacagatctaaaaatttccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatcca 29543584  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  29543585 taaggatctgagttttgaaagcaagaacgagtaccagaaaa 29543625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 185 - 324
Target Start/End: Original strand, 29558896 - 29559035
Alignment:
Q  185 atcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    |||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  29558896 atcacagtttaaacccgtaaaa-tcacgcaagcaaacagatctaaaaatttccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatcca 29558994  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  29558995 taaggatctgagttttgaaagcaagaacgagtaccagaaaa 29559035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 185 - 324
Target Start/End: Original strand, 31544687 - 31544826
Alignment:
Q  185 atcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    |||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  31544687 atcacagtttaaacccgtaaaa-tcacgcaagcaaacagatctaaaaatttccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatcca 31544785  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  31544786 taaggatctgagttttgaaagcaagaacgagtaccagaaaa 31544826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 127 - 324
Target Start/End: Original strand, 27479041 - 27479233
Alignment:
Q  127 aatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaa---taatatcatagtttaaacctgtaaaaatcacgcaagcaa-aca 222  Q
    |||||||||||||||| ||||||||||||||||||       ||||||  ||||   |||||||| |||| || |||||||||| || |||||||| |||    
T  27479041 aatctccaatcaaaaatttcaggtaaaactcagaa-------tctttttaaaaaatataatatcacagttgaa-cctgtaaaaa-catgcaagcaataca 27479131  T
Q  223 gatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    ||||||| ||||||||||||||||    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||    
T  27479132 gatctaagatttccagaattcaaaagcgaagccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaagcaagaacgaataccagaa 27479231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 127 - 324
Target Start/End: Original strand, 27494295 - 27494487
Alignment:
Q  127 aatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaa---taatatcatagtttaaacctgtaaaaatcacgcaagcaa-aca 222  Q
    |||||||||||||||| ||||||||||||||||||       ||||||  ||||   |||||||| |||| || |||||||||| || |||||||| |||    
T  27494295 aatctccaatcaaaaatttcaggtaaaactcagaa-------tctttttaaaaaatataatatcacagttgaa-cctgtaaaaa-catgcaagcaataca 27494385  T
Q  223 gatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    ||||||| ||||||||||||||||    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||    
T  27494386 gatctaagatttccagaattcaaaagcgaagccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaagcaagaacgaataccagaa 27494485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 185 - 322
Target Start/End: Original strand, 29566965 - 29567101
Alignment:
Q  185 atcatagtttaaacctgtaaa-aatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    |||||||||||| |||||||| ||||||| |||||| || ||| ||||||||||||||||||||| ||  |||||||||||||||| |||||| ||||||    
T  29566965 atcatagtttaagcctgtaaacaatcacgtaagcaagcatatcaaaaatttccagaattcaaagaaaa--ccgtaaccgtaaacacgaaacctagatcca 29567062  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  29567063 taaggatctaagttttgaaagcaagaacgagtactagaa 29567101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 185 - 322
Target Start/End: Original strand, 29582372 - 29582508
Alignment:
Q  185 atcatagtttaaacctgtaaa-aatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    |||||||||||| |||||||| ||||||| |||||| || ||| ||||||||||||||||||||| ||  |||||||||||||||| |||||| ||||||    
T  29582372 atcatagtttaagcctgtaaacaatcacgtaagcaagcatatcaaaaatttccagaattcaaagaaaa--ccgtaaccgtaaacacgaaacctagatcca 29582469  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  29582470 taaggatctaagttttgaaagcaagaacgagtactagaa 29582508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 203 - 324
Target Start/End: Original strand, 29495377 - 29495498
Alignment:
Q  203 aaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttga 301  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  29495377 aaaaatcacgcaagcaa-cagatctaaaaatttccagaattcaaagataagactgtaaccgtaaacacaaaacctagatccataaggatctaagtgttga 29495475  T
Q  302 aagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||| ||| |||||    
T  29495476 aagcaagaacaagcaccggaaaa 29495498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 203 - 324
Target Start/End: Original strand, 29510715 - 29510836
Alignment:
Q  203 aaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttga 301  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  29510715 aaaaatcacgcaagcaa-cagatctaaaaatttccagaattcaaagataagactgtaaccgtaaacacaaaacctagatccataaggatctaagtgttga 29510813  T
Q  302 aagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||| ||| |||||    
T  29510814 aagcaagaacaagcaccggaaaa 29510836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 185 - 324
Target Start/End: Complemental strand, 34455283 - 34455142
Alignment:
Q  185 atcatagtttaaacctgtaaa-aatcacgcaagcaaa--cagatcta-aaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggat 280  Q
    |||||||||| |||| ||||| |||||||||||||||  || ||| | ||||||||||||||||||||  ||| | |||||||||||||||||||| |||    
T  34455283 atcatagtttgaaccggtaaacaatcacgcaagcaaaagcatatcaagaaatttccagaattcaaaga--aagtcataaccgtaaacacaaaacctagat 34455186  T
Q  281 ccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  34455185 ccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 34455142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 185 - 324
Target Start/End: Complemental strand, 34469571 - 34469430
Alignment:
Q  185 atcatagtttaaacctgtaaa-aatcacgcaagcaaa--cagatcta-aaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggat 280  Q
    |||||||||| |||| ||||| |||||||||||||||  || ||| | ||||||||||||||||||||  ||| | |||||||||||||||||||| |||    
T  34469571 atcatagtttgaaccggtaaacaatcacgcaagcaaaagcatatcaagaaatttccagaattcaaaga--aagtcataaccgtaaacacaaaacctagat 34469474  T
Q  281 ccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  34469473 ccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 34469430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 202 - 313
Target Start/End: Original strand, 4519372 - 4519484
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttg 300  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||  ||| |||||||||| |||||||||||| |||||||||||||||||||||||    
T  4519372 taaaaatcacgcaagcaaaacagatccaaaatttccagaattcaaagccaaaaccgtaaccgtgaacacaaaacctagatccataaggatctaagttttg 4519471  T
Q  301 aaagcaagaacaa 313  Q
    ||||||| |||||    
T  4519472 aaagcaaaaacaa 4519484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 202 - 313
Target Start/End: Original strand, 4534559 - 4534671
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttg 300  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||  ||| |||||||||| |||||||||||| |||||||||||||||||||||||    
T  4534559 taaaaatcacgcaagcaaaacagatccaaaatttccagaattcaaagccaaaaccgtaaccgtgaacacaaaacctagatccataaggatctaagttttg 4534658  T
Q  301 aaagcaagaacaa 313  Q
    ||||||| |||||    
T  4534659 aaagcaaaaacaa 4534671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 101 - 322
Target Start/End: Original strand, 16683371 - 16683587
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcga-aaataatatcatagtttaaacc 199  Q
    |||| ||||||||||||| ||| ||||||||||| | ||||||| |||||||||||||||||      ||||||| | ||||| ||||||||||||||||    
T  16683371 caagcgtttccgaagaaactcaacagaatctcca-taaaaaact-caggtaaaactcagaacc-----tcttttcaacaaatagtatcatagtttaaacc 16683463  T
Q  200 tgtaaaaa-tcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtt 297  Q
    |||||||| ||||| ||||||  ||||| ||||||||||||||||| ||| ||| |  |||||||||||| |||||||| ||||| |||||||| ||| |    
T  16683464 tgtaaaaaatcacgtaagcaagaagatc-aaaatttccagaattcagagagaaaactataaccgtaaacatcaaaacctagatccgtaaggatcaaagct 16683562  T
Q  298 ttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||| ||||||||||    
T  16683563 ttgaaagcaagaacgagtaccagaa 16683587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 202 - 313
Target Start/End: Complemental strand, 26107345 - 26107234
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttg 300  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  26107345 taaaaatcacgcaagcaaaacagatccaaa-tttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagttttg 26107247  T
Q  301 aaagcaagaacaa 313  Q
    |||||||||||||    
T  26107246 aaagcaagaacaa 26107234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 202 - 313
Target Start/End: Complemental strand, 26122577 - 26122466
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttg 300  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  26122577 taaaaatcacgcaagcaaaacagatccaaa-tttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagttttg 26122479  T
Q  301 aaagcaagaacaa 313  Q
    |||||||||||||    
T  26122478 aaagcaagaacaa 26122466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 127 - 324
Target Start/End: Original strand, 26783052 - 26783246
Alignment:
Q  127 aatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaa---taatatcatagtttaaacctgtaaaaatcacgcaagcaa-aca 222  Q
    |||||||||||||||| ||||||||||||||||||     | | ||||  ||||   |||||||| |||| || |||||||||| || |||||| | |||    
T  26783052 aatctccaatcaaaaatttcaggtaaaactcagaa-----tcttttttaaaaaagtataatatcacagttgaa-cctgtaaaaa-catgcaagcgacaca 26783144  T
Q  223 gatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    ||||||| ||||||||||||||||    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||    
T  26783145 gatctaagatttccagaattcaaaagcgaagccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaagcaagaacgaataccagaa 26783244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 127 - 324
Target Start/End: Original strand, 26795024 - 26795218
Alignment:
Q  127 aatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaa---taatatcatagtttaaacctgtaaaaatcacgcaagcaa-aca 222  Q
    |||||||||||||||| ||||||||||||||||||     | | ||||  ||||   |||||||| |||| || |||||||||| || |||||| | |||    
T  26795024 aatctccaatcaaaaatttcaggtaaaactcagaa-----tcttttttaaaaaagtataatatcacagttgaa-cctgtaaaaa-catgcaagcgacaca 26795116  T
Q  223 gatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    ||||||| ||||||||||||||||    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||    
T  26795117 gatctaagatttccagaattcaaaagcgaagccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaagcaagaacgaataccagaa 26795216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 101 - 322
Target Start/End: Original strand, 16668089 - 16668305
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcga-aaataatatcatagtttaaacc 199  Q
    |||| ||||||||||||| ||| ||||||||||| | ||||||| |||||||||||||||||      ||||||| | ||||| ||||||||||||||||    
T  16668089 caagcgtttccgaagaaactcaacagaatctcca-taaaaaact-caggtaaaactcagaacc-----tcttttcaacaaatagtatcatagtttaaacc 16668181  T
Q  200 tgtaaaaa-tcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtt 297  Q
    |||||||| ||||| ||| ||  ||||| ||||||||||||||||| ||| ||| |  |||||||||||| |||||||| ||||| |||||||| ||| |    
T  16668182 tgtaaaaaatcacgtaagaaagaagatc-aaaatttccagaattcagagagaaaactataaccgtaaacatcaaaacctagatccgtaaggatcaaagct 16668280  T
Q  298 ttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||| ||||||||||    
T  16668281 ttgaaagcaagaacgagtaccagaa 16668305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 185 - 323
Target Start/End: Complemental strand, 27620236 - 27620099
Alignment:
Q  185 atcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    |||||| |||||||||| |||| |||||| || |||||||||||||| ||||||||||||||||| ||| |||||||||||| ||| ||| || ||||||    
T  27620236 atcataatttaaacctgcaaaa-tcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcca 27620139  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaaa 323  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  27620138 taaggatctaaattttgaaagcaagaacgagtaccagaaa 27620099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 185 - 323
Target Start/End: Complemental strand, 27635846 - 27635709
Alignment:
Q  185 atcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    |||||| |||||||||| |||| |||||| || |||||||||||||| ||||||||||||||||| ||| |||||||||||| ||| ||| || ||||||    
T  27635846 atcataatttaaacctgcaaaa-tcacgcgag-aaacagatctaaaaatttccagaattcaaagagaaaaccgtaaccgtaagcacgaaatctagatcca 27635749  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaaa 323  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  27635748 taaggatctaaattttgaaagcaagaacgagtaccagaaa 27635709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 101 - 321
Target Start/End: Original strand, 27191651 - 27191859
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacct 200  Q
    ||||||||||||||||||   | |||||||||||   ||||||| ||||||||||||||||     | ||| ||| ||||||||||||||||||||||||    
T  27191651 caagtgtttccgaagaaacctaacagaatctccat--aaaaact-caggtaaaactcagaa-----tctctcttcaaaaataatatcatagtttaaacct 27191742  T
Q  201 gtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttg 300  Q
    | |||| |||||  |  |||||||   |||||||||||||| || | | ||| || |||||||||||||||||||| |||||||||||||||||||||||    
T  27191743 gcaaaa-tcacgtgaataaacagaa--aaaatttccagaat-cacaaagaaaaccataaccgtaaacacaaaacctagatccataaggatctaagttttg 27191838  T
Q  301 aaagcaagaacaagtaccaga 321  Q
    |||||||||||||| ||||||    
T  27191839 aaagcaagaacaagcaccaga 27191859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 101 - 321
Target Start/End: Original strand, 27203504 - 27203712
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacct 200  Q
    ||||||||||||||||||   | |||||||||||   ||||||| ||||||||||||||||     | ||| ||| ||||||||||||||||||||||||    
T  27203504 caagtgtttccgaagaaacctaacagaatctccat--aaaaact-caggtaaaactcagaa-----tctctcttcaaaaataatatcatagtttaaacct 27203595  T
Q  201 gtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttg 300  Q
    | |||| |||||  |  |||||||   |||||||||||||| || | | ||| || |||||||||||||||||||| |||||||||||||||||||||||    
T  27203596 gcaaaa-tcacgtgaataaacagaa--aaaatttccagaat-cacaaagaaaaccataaccgtaaacacaaaacctagatccataaggatctaagttttg 27203691  T
Q  301 aaagcaagaacaagtaccaga 321  Q
    |||||||||||||| ||||||    
T  27203692 aaagcaagaacaagcaccaga 27203712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 101 - 321
Target Start/End: Complemental strand, 27245727 - 27245519
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacct 200  Q
    ||||||||||||||||||   | |||||||||||   ||||||| ||||||||||||||||     | ||| ||| ||||||||||||||||||||||||    
T  27245727 caagtgtttccgaagaaacctaacagaatctccat--aaaaact-caggtaaaactcagaa-----tctctcttcaaaaataatatcatagtttaaacct 27245636  T
Q  201 gtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttg 300  Q
    | |||| |||||  |  |||||||   |||||||||||||| || | | ||| || |||||||||||||||||||| |||||||||||||||||||||||    
T  27245635 gcaaaa-tcacgtgaataaacagaa--aaaatttccagaat-cacaaagaaaaccataaccgtaaacacaaaacctagatccataaggatctaagttttg 27245540  T
Q  301 aaagcaagaacaagtaccaga 321  Q
    |||||||||||||| ||||||    
T  27245539 aaagcaagaacaagcaccaga 27245519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 101 - 321
Target Start/End: Complemental strand, 27257590 - 27257382
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacct 200  Q
    ||||||||||||||||||   | |||||||||||   ||||||| ||||||||||||||||     | ||| ||| ||||||||||||||||||||||||    
T  27257590 caagtgtttccgaagaaacctaacagaatctccat--aaaaact-caggtaaaactcagaa-----tctctcttcaaaaataatatcatagtttaaacct 27257499  T
Q  201 gtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttg 300  Q
    | |||| |||||  |  |||||||   |||||||||||||| || | | ||| || |||||||||||||||||||| |||||||||||||||||||||||    
T  27257498 gcaaaa-tcacgtgaataaacagaa--aaaatttccagaat-cacaaagaaaaccataaccgtaaacacaaaacctagatccataaggatctaagttttg 27257403  T
Q  301 aaagcaagaacaagtaccaga 321  Q
    |||||||||||||| ||||||    
T  27257402 aaagcaagaacaagcaccaga 27257382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 324
Target Start/End: Original strand, 27001753 - 27001877
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacac-aaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||||||  ||| |  ||||||||||||| ||||||| ||||| | |||||| |||||||    
T  27001753 taaaaatcacgtaagcaaaacagatccaaaatttccagaattcaaagccaaaactataaccgtaaacaccaaaacctagatccgtgaggatcaaagtttt 27001852  T
Q  300 gaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||||||||||    
T  27001853 gaaagcaagaacaagtaccagaaaa 27001877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 324
Target Start/End: Original strand, 27017259 - 27017383
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacac-aaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||||||  ||| |  ||||||||||||| ||||||| ||||| | |||||| |||||||    
T  27017259 taaaaatcacgtaagcaaaacagatccaaaatttccagaattcaaagccaaaactataaccgtaaacaccaaaacctagatccgtgaggatcaaagtttt 27017358  T
Q  300 gaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||||||||||    
T  27017359 gaaagcaagaacaagtaccagaaaa 27017383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 321
Target Start/End: Original strand, 16996920 - 16997106
Alignment:
Q  130 ctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacaga-tcta 228  Q
    ||||||||||||||||||||||||||||||||     || |||||| ||| | |||||||||||||| ||||||||| |||||  | |||||||| || |    
T  16996920 ctccaatcaaaaacttcaggtaaaactcagaa-----ttccttttcaaaagtgatatcatagtttaa-cctgtaaaa-tcacgtgaacaaacagaatcca 16997012  T
Q  229 aaa-tttccagaattcaaagataaagccgtaaccgtaaacac-aaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    ||| ||||||||||| |||  |||| ||  |||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  16997013 aaagtttccagaattaaaaactaaaacca-aaccgtaaacaccaaaacctagatccataaggatccaagttttgaaagcaagaacaagcaccaga 16997106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 4767048 - 4767141
Alignment:
Q  231 atttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||  || |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||   ||||||||||    
T  4767048 atttccagaattcaaagccaaggccgtaaccgtaaacataaaacctagatccataaggatctaagttttgaaagcaagaacgcataccagaaaa 4767141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 4786115 - 4786022
Alignment:
Q  231 atttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||  || |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||   ||||||||||    
T  4786115 atttccagaattcaaagccaaggccgtaaccgtaaacataaaacctagatccataaggatctaagttttgaaagcaagaacgcataccagaaaa 4786022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 320
Target Start/End: Complemental strand, 2651083 - 2650959
Alignment:
Q  193 ttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatct 292  Q
    |||||||||||||| |||||| ||||| || ||| ||||||||||||||||||||| ||  || ||||||||||||| |||||| |||||||||||||||    
T  2651083 ttaaacctgtaaaa-tcacgcgagcaagcatatc-aaaatttccagaattcaaagaaaa--ccataaccgtaaacacgaaacctagatccataaggatct 2650988  T
Q  293 aagtttt-gaaagcaagaacaagtaccag 320  Q
    ||||||| |||| |||||||||| |||||    
T  2650987 aagttttggaaaacaagaacaagcaccag 2650959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 4753589 - 4753496
Alignment:
Q  231 atttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||  || |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||   ||||||||||    
T  4753589 atttccagaattcaaagccaaggccgtaaccgtaaacataaaacctagatccataaggatctaaattttgaaagcaagaacgcataccagaaaa 4753496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 4782203 - 4782296
Alignment:
Q  231 atttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||  || |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||   ||||||||||    
T  4782203 atttccagaattcaaagccaaggccgtaaccgtaaacataaaacctagatccataaggatctaaattttgaaagcaagaacgcataccagaaaa 4782296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 16563665 - 16563735
Alignment:
Q  254 ccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||| |||||||    
T  16563665 ccgtaaccgtaaacacaaaatctagatccataaggatctaggttttgaaagcaagaacaagtatcagaaaa 16563735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 321
Target Start/End: Original strand, 27212039 - 27212225
Alignment:
Q  130 ctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacaga-tcta 228  Q
    ||||||||||||||||||||||||||||||||     || |||||| ||| | |||||||||||||| ||||||||| |||||  | |||||||| || |    
T  27212039 ctccaatcaaaaacttcaggtaaaactcagaa-----ttccttttcaaaagtgatatcatagtttaa-cctgtaaaa-tcacgtgaacaaacagaatcca 27212131  T
Q  229 aaa-tttccagaattcaaagataaagccgtaaccgtaaacac-aaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    ||| ||||||||||| |||  |||| ||  |||||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||    
T  27212132 aaagtttccagaattaaaaactaaaacca-aaccgtaaacaccaaaacctagatccatgaggatccaagttttgaaagcaagatcaagcaccaga 27212225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 321
Target Start/End: Complemental strand, 27237189 - 27237003
Alignment:
Q  130 ctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacaga-tcta 228  Q
    ||||||||||||||||||||||||||||||||     || |||||| ||| | |||||||||||||| ||||||||| |||||  | |||||||| || |    
T  27237189 ctccaatcaaaaacttcaggtaaaactcagaa-----ttccttttcaaaagtgatatcatagtttaa-cctgtaaaa-tcacgtgaacaaacagaatcca 27237097  T
Q  229 aaa-tttccagaattcaaagataaagccgtaaccgtaaacac-aaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    ||| ||||||||||| |||  |||| ||  |||||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||    
T  27237096 aaagtttccagaattaaaaactaaaacca-aaccgtaaacaccaaaacctagatccatgaggatccaagttttgaaagcaagatcaagcaccaga 27237003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 321
Target Start/End: Complemental strand, 27308517 - 27308331
Alignment:
Q  130 ctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacaga-tcta 228  Q
    ||||||||||||||||||||||||||||||||     || |||||| ||| | |||||||||||||| ||||||||| |||||  | |||||||| || |    
T  27308517 ctccaatcaaaaacttcaggtaaaactcagaa-----ttccttttcaaaagtgatatcatagtttaa-cctgtaaaa-tcacgtgaacaaacagaatcca 27308425  T
Q  229 aaa-tttccagaattcaaagataaagccgtaaccgtaaacac-aaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    ||| ||||||||||| |||  |||| ||  |||||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||| ||||||    
T  27308424 aaagtttccagaattaaaaactaaaacca-aaccgtaaacaccaaaacctagatccatgaggatccaagttttgaaagcaagatcaagcaccaga 27308331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 141
Target Start/End: Original strand, 31540060 - 31540117
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaa 141  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||    
T  31540060 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacaaaatctccaagcaaaa 31540117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 319
Target Start/End: Original strand, 18939181 - 18939273
Alignment:
Q  228 aaaatttccagaattc-aaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtacca 319  Q
    ||||||||||||||   |||||||||  | |||||||||||||||||| | |||||||||||||| ||| |||| ||||||||||||| ||||    
T  18939181 aaaatttccagaatcataaagataaaatcataaccgtaaacacaaaacatagatccataaggatccaagctttgtaagcaagaacaagcacca 18939273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 7986644 - 7986747
Alignment:
Q  202 taaaaatcacgcaagc-aaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    |||||||||||||||| ||||||||| |||  |||||||||||||||  ||| || |||||||||||| ||||| || ||||| |||||||| | |||||    
T  7986644 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaaccataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 7986741  T
Q  300 gaaagc 305  Q
    ||||||    
T  7986742 gaaagc 7986747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 30548890 - 30548787
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||| |||  |||||||||||||||  ||| || |||||||||||| ||||| || ||||| |||||||| | |||||    
T  30548890 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaaccataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 30548793  T
Q  300 gaaagc 305  Q
    ||||||    
T  30548792 gaaagc 30548787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 30564154 - 30564051
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||| |||  |||||||||||||||  ||| || |||||||||||| ||||| || ||||| |||||||| | |||||    
T  30564154 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaaccataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 30564057  T
Q  300 gaaagc 305  Q
    ||||||    
T  30564056 gaaagc 30564051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 84 - 324
Target Start/End: Complemental strand, 16775 - 16535
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataa 183  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16775 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcaaaaataa 16676  T
Q  184 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  16675 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaaattccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatcca 16576  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  16575 taaggatctgagttttgaaagcaagaacgagtaccagaaaa 16535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 84 - 324
Target Start/End: Complemental strand, 14750538 - 14750298
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataa 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14750538 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacagaacctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcaaaaataa 14750439  T
Q  184 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  14750438 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatcca 14750339  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  14750338 taaggatctgagttttgaaagcaagaacgagtaccagaaaa 14750298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 84 - 324
Target Start/End: Complemental strand, 14769641 - 14769401
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataa 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14769641 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacagaacctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcaaaaataa 14769542  T
Q  184 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  14769541 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatcca 14769442  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  14769441 taaggatctgagttttgaaagcaagaacgagtaccagaaaa 14769401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 96 - 324
Target Start/End: Complemental strand, 36321336 - 36321118
Alignment:
Q  96 agaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagttta 195  Q
    |||||||||| |||||||||||  |||| | |||||||||||||||||||||||||||||||||||     | ||||||| ||| |||| |||  ||| |    
T  36321336 agaatcaagt-tttccgaagaatctcacaa-aatctccaatcaaaaacttcaggtaaaactcagaa-----tctcttttcaaaagtaatgtcacggtt-a 36321245  T
Q  196 aacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaag 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36321244 aacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaat--atagataaagccgtaaccgtaaacacaaaacctagatccataaggatctaag 36321147  T
Q  296 ttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||||||||||||||    
T  36321146 ttttgaaagcaagaacaagtaccagaaaa 36321118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 96 - 324
Target Start/End: Complemental strand, 36335545 - 36335327
Alignment:
Q  96 agaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagttta 195  Q
    |||||||||| |||||||||||  |||| | |||||||||||||||||||||||||||||||||||     | ||||||| ||| |||| |||  ||| |    
T  36335545 agaatcaagt-tttccgaagaatctcacaa-aatctccaatcaaaaacttcaggtaaaactcagaa-----tctcttttcaaaagtaatgtcacggtt-a 36335454  T
Q  196 aacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaag 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36335453 aacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaat--atagataaagccgtaaccgtaaacacaaaacctagatccataaggatctaag 36335356  T
Q  296 ttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||||||||||||||    
T  36335355 ttttgaaagcaagaacaagtaccagaaaa 36335327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 96 - 324
Target Start/End: Complemental strand, 36350635 - 36350417
Alignment:
Q  96 agaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagttta 195  Q
    |||||||||| |||||||||||  |||| | |||||||||||||||||||||||||||||||||||     | ||||||| ||| |||| |||  ||| |    
T  36350635 agaatcaagt-tttccgaagaatctcacaa-aatctccaatcaaaaacttcaggtaaaactcagaa-----tctcttttcaaaagtaatgtcacggtt-a 36350544  T
Q  196 aacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaag 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36350543 aacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaat--atagataaagccgtaaccgtaaacacaaaacctagatccataaggatctaag 36350446  T
Q  296 ttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||||||||||||||    
T  36350445 ttttgaaagcaagaacaagtaccagaaaa 36350417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 176 - 324
Target Start/End: Complemental strand, 20329401 - 20329250
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaaa-tcacgcaagc-aaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaa 272  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  20329401 gaaaataatatcatagtttaaacctgtaaaaaatcacgcaagcgaaacagatctaaaaatttccagaattcaaagataagaccgtaaccgtaaacacaaa 20329302  T
Q  273 acctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  20329301 acctagatccataaggatctaagttttgaaagcaagaacaagcaccagaaaa 20329250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 176 - 324
Target Start/End: Complemental strand, 20336430 - 20336279
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaaa-tcacgcaagc-aaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaa 272  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  20336430 gaaaataatatcatagtttaaacctgtaaaaaatcacgcaagcgaaacagatctaaaaatttccagaattcaaagataagaccgtaaccgtaaacacaaa 20336331  T
Q  273 acctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  20336330 acctagatccataaggatctaagttttgaaagcaagaacaagcaccagaaaa 20336279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 185 - 324
Target Start/End: Original strand, 43150494 - 43150633
Alignment:
Q  185 atcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    |||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  43150494 atcacagtttaaacccgtaaaa-tcacgcaagcaaacagatctaaaaatttccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatcca 43150592  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  43150593 taaggatctgagttttgaaagcaagaacgagtaccagaaaa 43150633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 101 - 313
Target Start/End: Complemental strand, 18791630 - 18791425
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcga-aaataatatcatagtttaaacc 199  Q
    |||| ||||||||||||| ||| |||||||||||   ||||||| |||||||||||||||||      ||||||| | |||||| |||||||||||||||    
T  18791630 caagcgtttccgaagaaactcaacagaatctccat--aaaaact-caggtaaaactcagaacc-----tcttttcaacaaataaaatcatagtttaaacc 18791539  T
Q  200 tgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaag-ccgtaaccgtaaacacaaaacctggatccataaggatctaagttt 298  Q
    |||||||||||||||||||| |||||| ||||||||||||| ||||||| |||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  18791538 tgtaaaaatcacgcaagcaa-cagatccaaaatttccagaactcaaagacaaaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagttt 18791440  T
Q  299 tgaaagcaagaacaa 313  Q
    ||||||| |||||||    
T  18791439 tgaaagcgagaacaa 18791425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 101 - 313
Target Start/End: Complemental strand, 18806258 - 18806053
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcga-aaataatatcatagtttaaacc 199  Q
    |||| ||||||||||||| ||| |||||||||||   ||||||| |||||||||||||||||      ||||||| | |||||| |||||||||||||||    
T  18806258 caagcgtttccgaagaaactcaacagaatctccat--aaaaact-caggtaaaactcagaacc-----tcttttcaacaaataaaatcatagtttaaacc 18806167  T
Q  200 tgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaag-ccgtaaccgtaaacacaaaacctggatccataaggatctaagttt 298  Q
    |||||||||||||||||||| |||||| ||||||||||||| ||||||| |||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  18806166 tgtaaaaatcacgcaagcaa-cagatccaaaatttccagaactcaaagacaaaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagttt 18806068  T
Q  299 tgaaagcaagaacaa 313  Q
    ||||||| |||||||    
T  18806067 tgaaagcgagaacaa 18806053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 130 - 321
Target Start/End: Complemental strand, 34195315 - 34195121
Alignment:
Q  130 ctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatct-- 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||| ||||||| |||||||||  | |||||||||||      
T  34195315 ctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcaaaagtgatatcatagttt-aacctgt-aaaatcacgtgaacaaacagatctaa 34195218  T
Q  228 -aaaatttccagaat-tcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
     ||||||||||||||  ||||||||||  | |||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  34195217 aaaaatttccagaatcacaaagataaaatcataaccgtaaacaccaaaacctagatccataaggatccaagttttgaaagcaagaacaagcaccaga 34195121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 178 - 324
Target Start/End: Original strand, 19367260 - 19367405
Alignment:
Q  178 aaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacct 276  Q
    |||||||||||||||||||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||| ||  |||||||||||| ||| ||||||    
T  19367260 aaataatatcatagtttaaacctgtaaaaatcacgcgagcaagcatatcaaaaaatttccagaattcaaagaaaa--ccgtaaccgtaagcacgaaacct 19367357  T
Q  277 ggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||    
T  19367358 agatccataaggatctaagttttgaaagcaagaacgagtaccagaaaa 19367405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 203 - 314
Target Start/End: Complemental strand, 33664711 - 33664601
Alignment:
Q  203 aaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaa 302  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  33664711 aaaaatcacgcaagcag-cagatctaaaatttccagaattcaaagataaggttgtaaccgtaaacacaaaacctagatccataaggatctaagtgttgaa 33664613  T
Q  303 agcaagaacaag 314  Q
    ||| | ||||||    
T  33664612 agcgaaaacaag 33664601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 203 - 314
Target Start/End: Complemental strand, 33683523 - 33683413
Alignment:
Q  203 aaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaa 302  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  33683523 aaaaatcacgcaagcag-cagatctaaaatttccagaattcaaagataaggttgtaaccgtaaacacaaaacctagatccataaggatctaagtgttgaa 33683425  T
Q  303 agcaagaacaag 314  Q
    ||| | ||||||    
T  33683424 agcgaaaacaag 33683413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 162 - 324
Target Start/End: Complemental strand, 763070 - 762909
Alignment:
Q  162 cagaatttcttttc-gaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaac 260  Q
    |||||| ||||||| |||||||| |||| |||||||||| |||||| |||||| ||||| || ||| ||||||||||||||||||||| ||  |  ||||    
T  763070 cagaatctcttttcagaaaataaaatcacagtttaaacccgtaaaa-tcacgcgagcaagcatatcaaaaatttccagaattcaaagaaaa--ctataac 762974  T
Q  261 cgtaaacac-aaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||| ||||||| ||||| | |||||| ||||||||||||||||||||||||||||||||    
T  762973 cgtaaacaccaaaacctagatccgtgaggatcaaagttttgaaagcaagaacaagtaccagaaaa 762909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 203 - 314
Target Start/End: Original strand, 30747814 - 30747925
Alignment:
Q  203 aaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttga 301  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  30747814 aaaaatcacgcaagcag-cagatctaaaaatttccagaattcaaagataagactgtaaccgtaaacacaaaacctagatccataaggatctaagtgttga 30747912  T
Q  302 aagcaagaacaag 314  Q
    |||||| ||||||    
T  30747913 aagcaaaaacaag 30747925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 203 - 314
Target Start/End: Original strand, 30763119 - 30763230
Alignment:
Q  203 aaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttga 301  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  30763119 aaaaatcacgcaagcag-cagatctaaaaatttccagaattcaaagataagactgtaaccgtaaacacaaaacctagatccataaggatctaagtgttga 30763217  T
Q  302 aagcaagaacaag 314  Q
    |||||| ||||||    
T  30763218 aagcaaaaacaag 30763230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 33675760 - 33675843
Alignment:
Q  231 atttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaag 314  Q
    |||||||||||||||||  || |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  33675760 atttccagaattcaaagccaaggccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaaacaagaacaag 33675843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 5703889 - 5703959
Alignment:
Q  254 ccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||| |||||||    
T  5703889 ccgtaaccgtaaacacaaaatctagatccataaggatctaggttttgaaagcaagaacaagtatcagaaaa 5703959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 48916392 - 48916462
Alignment:
Q  254 ccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||    
T  48916392 ccgtaactgtaaacacaaaacctagatccataaggatctaggttttgaaagcaagaacaagtatcagaaaa 48916462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 314
Target Start/End: Original strand, 54827516 - 54827627
Alignment:
Q  203 aaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagttttg 300  Q
    |||||||||||||||||| |||||| ||| ||||||||||||||||| ||  |  |||||||||||| |||||||| ||||| |||||||| ||||||||    
T  54827516 aaaaatcacgcaagcaaaacagatccaaagtttccagaattcaaagaaaa--ctataaccgtaaacatcaaaacctagatccgtaaggatcaaagttttg 54827613  T
Q  301 aaagcaagaacaag 314  Q
    ||||||||||||||    
T  54827614 aaagcaagaacaag 54827627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 314
Target Start/End: Original strand, 54842743 - 54842854
Alignment:
Q  203 aaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagttttg 300  Q
    |||||||||||||||||| |||||| ||| ||||||||||||||||| ||  |  |||||||||||| |||||||| ||||| |||||||| ||||||||    
T  54842743 aaaaatcacgcaagcaaaacagatccaaagtttccagaattcaaagaaaa--ctataaccgtaaacatcaaaacctagatccgtaaggatcaaagttttg 54842840  T
Q  301 aaagcaagaacaag 314  Q
    ||||||||||||||    
T  54842841 aaagcaagaacaag 54842854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 314
Target Start/End: Original strand, 14728510 - 14728622
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||| |||  |||||||||||||||| ||  |  |||||||||||| ||||| || ||||| |||||||| | |||||    
T  14728510 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaagaaaa--ctataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 14728607  T
Q  300 gaaagcaagaacaag 314  Q
    |||||| ||||||||    
T  14728608 gaaagcgagaacaag 14728622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 21963775 - 21963878
Alignment:
Q  202 taaaaatcacgcaagc-aaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    |||||||||||||||| ||||||||| |||  |||||||||||||||  ||| || |||||||||||| ||||| || ||||| |||||||| | |||||    
T  21963775 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaaccataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 21963872  T
Q  300 gaaagc 305  Q
    ||||||    
T  21963873 gaaagc 21963878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 21979025 - 21979128
Alignment:
Q  202 taaaaatcacgcaagc-aaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    |||||||||||||||| ||||||||| |||  |||||||||||||||  ||| || |||||||||||| ||||| || ||||| |||||||| | |||||    
T  21979025 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaaccataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 21979122  T
Q  300 gaaagc 305  Q
    ||||||    
T  21979123 gaaagc 21979128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 35058420 - 35058355
Alignment:
Q  257 taaccgtaaacac-aaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    ||||||||||||| ||||||| |||||||||||||| || |||||||| |||||||||| ||||||    
T  35058420 taaccgtaaacaccaaaacctagatccataaggatccaaattttgaaaacaagaacaagcaccaga 35058355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 314
Target Start/End: Complemental strand, 4565474 - 4565362
Alignment:
Q  203 aaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagttttg 300  Q
    ||||| |||||||||||| |||||| |||  |||||||||||||||| ||| |  |||||||||||| ||||  || ||||| |||||||| | ||||||    
T  4565474 aaaaaccacgcaagcaaaacagatccaaaggttccagaattcaaaga-aaaactataaccgtaaacatcaaagtctagatccgtaaggatcaacgttttg 4565376  T
Q  301 aaagcaagaacaag 314  Q
    || || ||||||||    
T  4565375 aaggcgagaacaag 4565362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 84 - 324
Target Start/End: Complemental strand, 18283424 - 18283184
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataa 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18283424 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacagaacctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcaaaaataa 18283325  T
Q  184 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  18283324 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatcca 18283225  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  18283224 taaggatctgagttttgaaagcaagaacgagtaccagaaaa 18283184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 84 - 324
Target Start/End: Complemental strand, 18298725 - 18298485
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataa 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18298725 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacagaacctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcaaaaataa 18298626  T
Q  184 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  18298625 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatcca 18298526  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  18298525 taaggatctgagttttgaaagcaagaacgagtaccagaaaa 18298485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 84 - 324
Target Start/End: Complemental strand, 18314026 - 18313786
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataa 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18314026 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacagaacctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcaaaaataa 18313927  T
Q  184 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  18313926 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaaggtaaagccgtaaccgtaaacacaaaacctagatcca 18313827  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  18313826 taaggatctgagttttgaaagcaagaacgagtaccagaaaa 18313786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 101 - 313
Target Start/End: Original strand, 48459836 - 48460046
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctcca-atcaaaaacttcaggtaaaactcagaacagaatttcttttcga-aaataatatcatagtttaaac 198  Q
    |||| ||||||||||||| ||| ||||||||||| |  |||||  ||||||||||||||||||      ||||||| | |||| | ||||||||||||||    
T  48459836 caagcgtttccgaagaaactcaacagaatctccataaaaaaaaactcaggtaaaactcagaacc-----tcttttcaacaaatgaaatcatagtttaaac 48459930  T
Q  199 ctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagtt 297  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  48459931 ctgtaaaaatcacgcaagcaaacggatctaaaaatttccagaattcaaagataaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagtt 48460030  T
Q  298 ttgaaagcaagaacaa 313  Q
    ||||||||||||||||    
T  48460031 ttgaaagcaagaacaa 48460046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 101 - 313
Target Start/End: Original strand, 48475595 - 48475805
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctcca-atcaaaaacttcaggtaaaactcagaacagaatttcttttcga-aaataatatcatagtttaaac 198  Q
    |||| ||||||||||||| ||| ||||||||||| |  |||||  ||||||||||||||||||      ||||||| | |||| | ||||||||||||||    
T  48475595 caagcgtttccgaagaaactcaacagaatctccataaaaaaaaactcaggtaaaactcagaacc-----tcttttcaacaaatgaaatcatagtttaaac 48475689  T
Q  199 ctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagtt 297  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  48475690 ctgtaaaaatcacgcaagcaaacggatctaaaaatttccagaattcaaagataaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagtt 48475789  T
Q  298 ttgaaagcaagaacaa 313  Q
    ||||||||||||||||    
T  48475790 ttgaaagcaagaacaa 48475805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 101 - 321
Target Start/End: Complemental strand, 47197482 - 47197269
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaa--taatatcatagtttaaac 198  Q
    |||||||||||||||||| ||| |||||||||||    |||| ||||||||||||||||||     ||||| ||| ||||  ||||||||||||||||||    
T  47197482 caagtgtttccgaagaaactcaacagaatctccat---aaaaattcaggtaaaactcagaa-----tttctcttcaaaaaaataatatcatagtttaaac 47197391  T
Q  199 ctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttt 298  Q
    ||| ||||||||||  |  ||||||||||||| |||||||||| || | | ||| || ||||||||||||||||| || |||||||||||||||||||||    
T  47197390 ctgcaaaaatcacgtgaataaacagatctaaattttccagaat-cacaaagaaaaccataaccgtaaacacaaaatctagatccataaggatctaagttt 47197292  T
Q  299 tgaaagcaagaacaagtaccaga 321  Q
    |||||||||||||||| ||||||    
T  47197291 tgaaagcaagaacaagcaccaga 47197269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 202 - 313
Target Start/End: Original strand, 51776196 - 51776308
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttg 300  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  51776196 taaaaatcacgcaagcaaaacagatccaaaatttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagttttg 51776295  T
Q  301 aaagcaagaacaa 313  Q
    |||||||||||||    
T  51776296 aaagcaagaacaa 51776308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 202 - 313
Target Start/End: Original strand, 51791282 - 51791394
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttg 300  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  51791282 taaaaatcacgcaagcaaaacagatccaaaatttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagttttg 51791381  T
Q  301 aaagcaagaacaa 313  Q
    |||||||||||||    
T  51791382 aaagcaagaacaa 51791394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 193 - 324
Target Start/End: Complemental strand, 22119803 - 22119672
Alignment:
Q  193 ttaaacctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatc 291  Q
    |||||||||||||| |||||| | ||||||||||||||| |||||||||||||||||||||  | |||||||||||||||||||| ||||||||||||||    
T  22119803 ttaaacctgtaaaa-tcacgcgaacaaacagatctaaaaatttccagaattcaaagataaaatcataaccgtaaacacaaaacctagatccataaggatc 22119705  T
Q  292 taagttttgaaagcaagaacaagtaccagaaaa 324  Q
     ||||||||||||||||||||||  ||||||||    
T  22119704 caagttttgaaagcaagaacaagcgccagaaaa 22119672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 203 - 324
Target Start/End: Original strand, 18252020 - 18252141
Alignment:
Q  203 aaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttga 301  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  18252020 aaaaatcacgcaagcaa-cagatctaaaaatttccagaattcaaagataagactgtaaccgtaaacacaaaacctagatccataaggatctaagtgttga 18252118  T
Q  302 aagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||| ||| |||||    
T  18252119 aagcaagaacaagcaccggaaaa 18252141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 176 - 322
Target Start/End: Original strand, 26427153 - 26427299
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaaa-tcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaa 273  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| || ||| |||| ||||||||||||||||| ||  |||||||||||| ||| |||    
T  26427153 gaaaataatatcatagtttaaccctgtaaaaaatcacgcaagcaagcatatcaaaaaatttccagaattcaaagaaaa--ccgtaaccgtaagcacgaaa 26427250  T
Q  274 cctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    ||| |||||||||||||||||||||||||| ||||||| | ||||||||    
T  26427251 cctagatccataaggatctaagttttgaaaacaagaacgaataccagaa 26427299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 176 - 322
Target Start/End: Original strand, 10387979 - 10388126
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaaa-tcacgcaagcaaacagatctaaaa--tttccagaattcaaagataaagccgtaaccgtaaacacaaa 272  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| || ||| ||||  ||||||||||||||||| ||  |||||||||||| ||| ||    
T  10387979 gaaaataatatcatagtttaaccctgtaaaaaatcacgcaagcaagcatatcaaaaaaatttccagaattcaaagaaaa--ccgtaaccgtaagcacgaa 10388076  T
Q  273 acctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    |||| |||||||||||||||||||||||||| ||||||| | ||||||||    
T  10388077 acctagatccataaggatctaagttttgaaaacaagaacgaataccagaa 10388126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 313
Target Start/End: Complemental strand, 28106956 - 28106851
Alignment:
Q  207 atcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagca 306  Q
    ||||||||||||| |||||| ||||||||||||| |||||||  || ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28106956 atcacgcaagcaa-cagatccaaaatttccagaactcaaagacgaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaagca 28106858  T
Q  307 agaacaa 313  Q
    |||||||    
T  28106857 agaacaa 28106851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 313
Target Start/End: Complemental strand, 28122192 - 28122087
Alignment:
Q  207 atcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagca 306  Q
    ||||||||||||| |||||| ||||||||||||| |||||||  || ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28122192 atcacgcaagcaa-cagatccaaaatttccagaactcaaagacgaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaagca 28122094  T
Q  307 agaacaa 313  Q
    |||||||    
T  28122093 agaacaa 28122087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 185 - 324
Target Start/End: Complemental strand, 26680791 - 26680650
Alignment:
Q  185 atcatagtttaaacctgta-aaaatcacgcaagcaaa-cagatc--taaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggat 280  Q
    ||||||||||||||||||| ||||||||||||||||| || |||   |||||||||||| |||||||  ||| |||||||||||| ||| |||||| |||    
T  26680791 atcatagtttaaacctgtaaaaaatcacgcaagcaaagcatatcaaaaaaatttccagagttcaaag--aaaaccgtaaccgtaagcacgaaacctagat 26680694  T
Q  281 ccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  26680693 ccataaggatctaagttttgaaagcaagaacgagtaccagaaaa 26680650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 185 - 321
Target Start/End: Original strand, 5709432 - 5709570
Alignment:
Q  185 atcatagtttaaacctgtaaaaa---tcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggat 280  Q
    ||||||||||||||| |||||||   ||||||||||||| |||||| ||||||||||||||||||||| ||  |||||||||||| ||| |||||| |||    
T  5709432 atcatagtttaaaccggtaaaaaaaatcacgcaagcaaaacagatccaaaatttccagaattcaaagaaaa--ccgtaaccgtaagcacgaaacctagat 5709529  T
Q  281 ccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    || |||||||||||||||||||| |||||||||| ||||||    
T  5709530 ccgtaaggatctaagttttgaaaacaagaacaagcaccaga 5709570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 185 - 321
Target Start/End: Original strand, 5720342 - 5720480
Alignment:
Q  185 atcatagtttaaacctgtaaaaa---tcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggat 280  Q
    ||||||||||||||| |||||||   ||||||||||||| |||||| ||||||||||||||||||||| ||  |||||||||||| ||| |||||| |||    
T  5720342 atcatagtttaaaccggtaaaaaaaatcacgcaagcaaaacagatccaaaatttccagaattcaaagaaaa--ccgtaaccgtaagcacgaaacctagat 5720439  T
Q  281 ccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    || |||||||||||||||||||| |||||||||| ||||||    
T  5720440 ccgtaaggatctaagttttgaaaacaagaacaagcaccaga 5720480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 185 - 321
Target Start/End: Original strand, 5731245 - 5731383
Alignment:
Q  185 atcatagtttaaacctgtaaaaa---tcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggat 280  Q
    ||||||||||||||| |||||||   ||||||||||||| |||||| ||||||||||||||||||||| ||  |||||||||||| ||| |||||| |||    
T  5731245 atcatagtttaaaccggtaaaaaaaatcacgcaagcaaaacagatccaaaatttccagaattcaaagaaaa--ccgtaaccgtaagcacgaaacctagat 5731342  T
Q  281 ccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    || |||||||||||||||||||| |||||||||| ||||||    
T  5731343 ccgtaaggatctaagttttgaaaacaagaacaagcaccaga 5731383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 185 - 321
Target Start/End: Complemental strand, 5761123 - 5760985
Alignment:
Q  185 atcatagtttaaacctgtaaaaa---tcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggat 280  Q
    ||||||||||||||| |||||||   ||||||||||||| |||||| ||||||||||||||||||||| ||  |||||||||||| ||| |||||| |||    
T  5761123 atcatagtttaaaccggtaaaaaaaatcacgcaagcaaaacagatccaaaatttccagaattcaaagaaaa--ccgtaaccgtaagcacgaaacctagat 5761026  T
Q  281 ccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    || |||||||||||||||||||| |||||||||| ||||||    
T  5761025 ccgtaaggatctaagttttgaaaacaagaacaagcaccaga 5760985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 322
Target Start/End: Original strand, 10405353 - 10405499
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaaa-tcacgcaagcaaacagatctaaaa--tttccagaattcaaagataaagccgtaaccgtaaacacaaa 272  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| || ||| ||||  ||||||||||||||||| ||  |||||||||||| ||| ||    
T  10405353 gaaaataatatcatagtttaa-cctgtaaaaaatcacgcaagcaagcatatcaaaaaaatttccagaattcaaagaaaa--ccgtaaccgtaagcacgaa 10405449  T
Q  273 acctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    |||| |||||||||||||||||||||||||| ||||||| | ||||||||    
T  10405450 acctagatccataaggatctaagttttgaaaacaagaacgaataccagaa 10405499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 203 - 314
Target Start/End: Complemental strand, 16401377 - 16401267
Alignment:
Q  203 aaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaa 302  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  16401377 aaaaatcacgcaagcag-cagatctaaaatttccagaattcaaagataaggttgtaaccgtaaacacaaaacctagatccataaggatctaagtgttgaa 16401279  T
Q  303 agcaagaacaag 314  Q
    ||| | ||||||    
T  16401278 agcgaaaacaag 16401267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 193 - 324
Target Start/End: Original strand, 6226414 - 6226544
Alignment:
Q  193 ttaaacctgtaaaaatcacgcaagcaaacagatctaaaa--tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggat 290  Q
    |||||||||||||| |||||| ||||| || ||| ||||  ||||||||||||||||| ||  |||||||||||| ||| |||||| |||||||||||||    
T  6226414 ttaaacctgtaaaa-tcacgcgagcaagcatatcaaaaaaatttccagaattcaaagaaaa--ccgtaaccgtaagcacgaaacctagatccataaggat 6226510  T
Q  291 ctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||||||||| ||||||||||||    
T  6226511 ctaagttttgaaagcaagaacgagtaccagaaaa 6226544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 207 - 313
Target Start/End: Original strand, 5007714 - 5007819
Alignment:
Q  207 atcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagca 306  Q
    |||||||||||||  ||||| ||||||||||||| |||||||  || |||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  5007714 atcacgcaagcaat-agatccaaaatttccagaactcaaagacgaaaccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaagca 5007812  T
Q  307 agaacaa 313  Q
    |||||||    
T  5007813 agaacaa 5007819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 207 - 313
Target Start/End: Original strand, 5022973 - 5023078
Alignment:
Q  207 atcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagca 306  Q
    |||||||||||||  ||||| ||||||||||||| |||||||  || |||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  5022973 atcacgcaagcaat-agatccaaaatttccagaactcaaagacgaaaccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaagca 5023071  T
Q  307 agaacaa 313  Q
    |||||||    
T  5023072 agaacaa 5023078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 193 - 324
Target Start/End: Original strand, 22491254 - 22491383
Alignment:
Q  193 ttaaacctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatc 291  Q
    |||||||||||||| |||||| ||||| || ||| |||| ||||||||||||||||| ||   ||||||||||| ||| |||||| ||||||||||||||    
T  22491254 ttaaacctgtaaaa-tcacgcgagcaagcatatcaaaaaatttccagaattcaaagaaaat--cgtaaccgtaagcacgaaacctagatccataaggatc 22491350  T
Q  292 taagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||||| ||||||||||||    
T  22491351 taagttttgaaagcaagaacgagtaccagaaaa 22491383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 324
Target Start/End: Original strand, 28348405 - 28348529
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacac-aaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||  ||||||||||||||||||||  ||| |  ||||||||||||| ||||||| ||||| | |||||| |||||||    
T  28348405 taaaaatcacgcaagcaaaacagattcaaaatttccagaattcaaagccaaaactataaccgtaaacaccaaaacctagatccgtgaggatcaaagtttt 28348504  T
Q  300 gaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||||||||||    
T  28348505 gaaagcaagaacaagtaccagaaaa 28348529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 50140261 - 50140169
Alignment:
Q  228 aaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    ||||||||||||||||||||| ||  |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||    
T  50140261 aaaatttccagaattcaaagaaaa--ccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaagcaagaacgagtactagaa 50140169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 250 - 324
Target Start/End: Complemental strand, 5600295 - 5600221
Alignment:
Q  250 aaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||    
T  5600295 aaagccgtaaccgtaaacacaaaacctagatccataaggatctaggttttgaaagcaagaacaagtatcagaaaa 5600221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 250 - 324
Target Start/End: Complemental strand, 5615536 - 5615462
Alignment:
Q  250 aaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||    
T  5615536 aaagccgtaaccgtaaacacaaaacctagatccataaggatctaggttttgaaagcaagaacaagtatcagaaaa 5615462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 217 - 321
Target Start/End: Original strand, 17903524 - 17903630
Alignment:
Q  217 caaacagatctaaaatttccagaatt-caaagataaagccgtaaccgtaaacac-aaaacctggatccataaggatctaagttttgaaagcaagaacaag 314  Q
    |||||||||||||||||||||||||  ||||||||||  | ||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||    
T  17903524 caaacagatctaaaatttccagaatcacaaagataaaatcataaccgtaaacaccaaaacctagatccataaggatccaagttttgaaagcaagaacaag 17903623  T
Q  315 taccaga 321  Q
     ||||||    
T  17903624 caccaga 17903630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 6533664 - 6533571
Alignment:
Q  231 atttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||  || |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||   ||||||||||    
T  6533664 atttccagaattcaaagccaaggccgtaaccgtaaacataaaacctagatccataaggatctaagttttgaaagcaagaacgcataccagaaaa 6533571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 6547495 - 6547402
Alignment:
Q  231 atttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||  || |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||   ||||||||||    
T  6547495 atttccagaattcaaagccaaggccgtaaccgtaaacataaaacctagatccataaggatctaagttttgaaagcaagaacgcataccagaaaa 6547402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 324
Target Start/End: Original strand, 28333303 - 28333427
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacac-aaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||  ||||||||||||||||||||  ||| |  ||||||||||||| ||||||| ||||| | |||||| |||||||    
T  28333303 taaaaatcacgcaagcaaaacagattcaaaatttccagaattcaaagccaaaactataaccgtaaacaccaaaacctagatccgtgaggatcaaagtttt 28333402  T
Q  300 gaaagcaagaacaagtaccagaaaa 324  Q
    |||| ||||||||||||||||||||    
T  28333403 gaaatcaagaacaagtaccagaaaa 28333427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 206 - 314
Target Start/End: Original strand, 24322168 - 24322275
Alignment:
Q  206 aatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagc 305  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||  | |||||||||||||| |||||| |||||||||||||||| || |||||||     
T  24322168 aatcacgcaagcag-cagatctaaaaattccagaattcaaagataagactgtaaccgtaaacacgaaacctagatccataaggatctaggtgttgaaagt 24322266  T
Q  306 aagaacaag 314  Q
     ||||||||    
T  24322267 gagaacaag 24322275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 206 - 314
Target Start/End: Original strand, 24337520 - 24337627
Alignment:
Q  206 aatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagc 305  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||  | |||||||||||||| |||||| |||||||||||||||| || |||||||     
T  24337520 aatcacgcaagcag-cagatctaaaaattccagaattcaaagataagactgtaaccgtaaacacgaaacctagatccataaggatctaggtgttgaaagt 24337618  T
Q  306 aagaacaag 314  Q
     ||||||||    
T  24337619 gagaacaag 24337627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 324
Target Start/End: Original strand, 8205784 - 8205931
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaaa-tcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacac-aaaa 273  Q
    |||||||  ||||||||||||||||||||||| ||||| ||||||  ||||| ||| ||||||||||||||||| ||     ||||||||||||| ||||    
T  8205784 gaaaatagaatcatagtttaaacctgtaaaaaatcacgtaagcaagaagatc-aaagtttccagaattcaaagaaaatta--taaccgtaaacaccaaaa 8205880  T
Q  274 cctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||| ||||| | |||||| ||||||||| ||||||||||||||||||||||    
T  8205881 cctagatccgtgaggatcaaagttttgacagcaagaacaagtaccagaaaa 8205931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 193 - 320
Target Start/End: Original strand, 43716695 - 43716819
Alignment:
Q  193 ttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatct 292  Q
    |||||||||||||| |||||| ||||| || ||| ||||||||||||||||||||| ||  || ||||||||||||| |||||| |||||||||||||||    
T  43716695 ttaaacctgtaaaa-tcacgcgagcaagcatatc-aaaatttccagaattcaaagaaaa--ccataaccgtaaacacgaaacctagatccataaggatct 43716790  T
Q  293 aagttt-tgaaagcaagaacaagtaccag 320  Q
    ||||||  |||| |||||||||| |||||    
T  43716791 aagtttcggaaaacaagaacaagcaccag 43716819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 18236716 - 18236784
Alignment:
Q  256 gtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| |||||    
T  18236716 gtaaccgtaaacacaaaacctagatccataaggatctaagtgttgaaagcaagaacaagcaccggaaaa 18236784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 188 - 324
Target Start/End: Original strand, 8220965 - 8221100
Alignment:
Q  188 atagtttaaacctgtaaaaa-tcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacac-aaaacctggatccata 285  Q
    |||||||||||||||||||| ||||| ||||||  ||||| ||| ||||||||||||||||| ||     ||||||||||||| ||||||| ||||| |     
T  8220965 atagtttaaacctgtaaaaaatcacgtaagcaagaagatc-aaagtttccagaattcaaagaaaatta--taaccgtaaacaccaaaacctagatccgtg 8221061  T
Q  286 aggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  8221062 aggatcaaagttttgacagcaagaacaagtaccagaaaa 8221100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 130 - 321
Target Start/End: Complemental strand, 29139710 - 29139523
Alignment:
Q  130 ctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacaga-tcta 228  Q
    ||||||||||||||||||||||||||||| |||     | |||||| ||| | |||||||||||||| ||||||||| |||||  | |||||||| || |    
T  29139710 ctccaatcaaaaacttcaggtaaaactcaaaac-----tccttttcaaaagtgatatcatagtttaa-cctgtaaaa-tcacgtgaacaaacagaatcca 29139618  T
Q  229 aaa-tttccagaattcaaaga-taaagccgtaaccgtaaacac-aaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    ||| ||||||||||  ||| | |||| ||  |||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  29139617 aaagtttccagaatcaaaaaactaaaacca-aaccgtaaacaccaaaacctagatccataaggatccaagttttgaaagcaagaacaagcaccaga 29139523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 130 - 321
Target Start/End: Complemental strand, 29154515 - 29154328
Alignment:
Q  130 ctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacaga-tcta 228  Q
    ||||||||||||||||||||||||||||| |||     | |||||| ||| | |||||||||||||| ||||||||| |||||  | |||||||| || |    
T  29154515 ctccaatcaaaaacttcaggtaaaactcaaaac-----tccttttcaaaagtgatatcatagtttaa-cctgtaaaa-tcacgtgaacaaacagaatcca 29154423  T
Q  229 aaa-tttccagaattcaaaga-taaagccgtaaccgtaaacac-aaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    ||| ||||||||||  ||| | |||| ||  |||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  29154422 aaagtttccagaatcaaaaaactaaaacca-aaccgtaaacaccaaaacctagatccataaggatccaagttttgaaagcaagaacaagcaccaga 29154328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 16065112 - 16065062
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctcca 134  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||    
T  16065112 cacagaaaacgaagaatcaagtgtatccgaagaaattcaacaaaatctcca 16065062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 17975631 - 17975528
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||| |||  |||||||||||||||  ||| || |||||||||||| ||||| || ||||| |||||||| | |||||    
T  17975631 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaaccataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 17975534  T
Q  300 gaaagc 305  Q
    ||||||    
T  17975533 gaaagc 17975528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 17991179 - 17991076
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||| |||  |||||||||||||||  ||| || |||||||||||| ||||| || ||||| |||||||| | |||||    
T  17991179 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaaccataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 17991082  T
Q  300 gaaagc 305  Q
    ||||||    
T  17991081 gaaagc 17991076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 18219215 - 18219318
Alignment:
Q  202 taaaaatcacgcaagc-aaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    |||||||||||||||| ||||||||| |||  |||||||||||||||  ||| || |||||||||||| ||||| || ||||| |||||||| | |||||    
T  18219215 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaaccataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 18219312  T
Q  300 gaaagc 305  Q
    ||||||    
T  18219313 gaaagc 18219318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 18234523 - 18234626
Alignment:
Q  202 taaaaatcacgcaagc-aaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    |||||||||||||||| ||||||||| |||  |||||||||||||||  ||| || |||||||||||| ||||| || ||||| |||||||| | |||||    
T  18234523 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaaccataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 18234620  T
Q  300 gaaagc 305  Q
    ||||||    
T  18234621 gaaagc 18234626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 19441933 - 19441983
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctcca 134  Q
    |||||||||||||||||||||||||||||||||||| || || ||||||||    
T  19441933 cacagaaaacgaagaatcaagtgtttccgaagaaatccaacaaaatctcca 19441983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 219
Target Start/End: Complemental strand, 22769147 - 22769030
Alignment:
Q  96 agaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaat-aatatcatagttt 194  Q
    |||||||||| || ||| ||||| ||| |||||||||||   |||||||||||||||||||||||||      ||||||| ||||| || ||||||||||    
T  22769147 agaatcaagt-ttcccggagaaactcaacagaatctccatcaaaaaacttcaggtaaaactcagaac-----ctcttttcaaaaataaaaatcatagttt 22769054  T
Q  195 aaacctgtaaaaatcacgcaagcaa 219  Q
    |||||||  ||||||||||||||||    
T  22769053 aaacctg-caaaatcacgcaagcaa 22769030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 311
Target Start/End: Complemental strand, 29656563 - 29656454
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||| |||  |||||||||||||||| ||  |  |||||||||||| ||||| || ||||| |||||||| | |||||    
T  29656563 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaagaaaa--ctataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 29656466  T
Q  300 gaaagcaagaac 311  Q
    |||||| |||||    
T  29656465 gaaagcgagaac 29656454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 311
Target Start/End: Complemental strand, 29671207 - 29671098
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||| |||  |||||||||||||||| ||  |  |||||||||||| ||||| || ||||| |||||||| | |||||    
T  29671207 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaagaaaa--ctataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 29671110  T
Q  300 gaaagcaagaac 311  Q
    |||||| |||||    
T  29671109 gaaagcgagaac 29671098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 321
Target Start/End: Original strand, 26684566 - 26684674
Alignment:
Q  216 gcaaacagatctaaaa--tttccagaattca--aagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaac 311  Q
    ||||||||||||||||  |||||||||| ||  ||||||||  |||||||||||||||||||| | |||||||||||||| | |  ||| |||||||||     
T  26684566 gcaaacagatctaaaaaatttccagaat-catcaagataaaatcgtaaccgtaaacacaaaacatagatccataaggatccaggacttgtaagcaagaat 26684664  T
Q  312 aagtaccaga 321  Q
    ||| ||||||    
T  26684665 aagcaccaga 26684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 47017578 - 47017692
Alignment:
Q  96 agaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagttta 195  Q
    |||||||||| || ||| ||||| ||| ||||||||||| ||| |||| ||||||||||||||||||      || |||  ||||||| ||||||||| |    
T  47017578 agaatcaagt-ttcccggagaaactcaacagaatctcca-tcacaaacatcaggtaaaactcagaacc-----tcattttcaaaataaaatcatagtt-a 47017669  T
Q  196 aacctgtaaaaatcacgcaagca 218  Q
    |||||||||||||||||||||||    
T  47017670 aacctgtaaaaatcacgcaagca 47017692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 47032492 - 47032606
Alignment:
Q  96 agaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagttta 195  Q
    |||||||||| || ||| ||||| ||| ||||||||||| ||| |||| ||||||||||||||||||      || |||  ||||||| ||||||||| |    
T  47032492 agaatcaagt-ttcccggagaaactcaacagaatctcca-tcacaaacatcaggtaaaactcagaacc-----tcattttcaaaataaaatcatagtt-a 47032583  T
Q  196 aacctgtaaaaatcacgcaagca 218  Q
    |||||||||||||||||||||||    
T  47032584 aacctgtaaaaatcacgcaagca 47032606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 18217817 - 18217865
Alignment:
Q  203 aaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataa 251  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  18217817 aaaaatcacgcaagcaa-cagatctaaaaatttccagaattcaaagataa 18217865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 3065479 - 3065536
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaa 161  Q
    |||||||||||||||||| ||| |||||||||||   |||||| |||||||||||||||||    
T  3065479 caagtgtttccgaagaaactcaacagaatctcca--taaaaac-tcaggtaaaactcagaa 3065536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 84 - 314
Target Start/End: Original strand, 3056 - 3287
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaa-ta 182  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  3056 cacagaaaacgaagaatcgagtgtttccgaagaaattcaacagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcaaaaaata 3155  T
Q  183 atatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcc 282  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  3156 atatcatagcttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaaaccgtaaccgtaaacacaaaacctagatcc 3255  T
Q  283 ataaggatctaagttttgaaagcaagaacaag 314  Q
    ||||||||||||||||||||||||||||||||    
T  3256 ataaggatctaagttttgaaagcaagaacaag 3287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 4e-81; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 84 - 314
Target Start/End: Original strand, 27114729 - 27114957
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataa 183  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27114729 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcaaaaataa 27114828  T
Q  184 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaac-acaaaacctggatcc 282  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||  | ||| ||| || |||||||||||  | || ||| |||||    
T  27114829 tatcatagtttaaacctgt-aaaatcacgcaagcaaatagatctaaaatttccagaat--acagagaaaaccataaccgtaaacgccgaagcctagatcc 27114925  T
Q  283 ataaggatctaagttttgaaagcaagaacaag 314  Q
     |||||||| ||||||||||||||||||||||    
T  27114926 gtaaggatccaagttttgaaagcaagaacaag 27114957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 84 - 314
Target Start/End: Original strand, 27125694 - 27125922
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataa 183  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27125694 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcaaaaataa 27125793  T
Q  184 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaac-acaaaacctggatcc 282  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||  | ||| ||| || |||||||||||  | || ||| |||||    
T  27125794 tatcatagtttaaacctgt-aaaatcacgcaagcaaatagatctaaaatttccagaat--acagagaaaaccataaccgtaaacgccgaagcctagatcc 27125890  T
Q  283 ataaggatctaagttttgaaagcaagaacaag 314  Q
     |||||||| ||||||||||||||||||||||    
T  27125891 gtaaggatccaagttttgaaagcaagaacaag 27125922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 101 - 313
Target Start/End: Complemental strand, 31473390 - 31473184
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcga-aaataatatcatagtttaaacc 199  Q
    |||| ||||| ||||||| ||| ||||||||||| | ||||||| |||||||||||||||||      ||||||| | |||||| |||||||||||||||    
T  31473390 caagcgtttctgaagaaactcaacagaatctcca-taaaaaact-caggtaaaactcagaacc-----tcttttcaacaaataaaatcatagtttaaacc 31473298  T
Q  200 tgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaag-ccgtaaccgtaaacacaaaacctggatccataaggatctaagttt 298  Q
    |||||||||||||||||||| |||||| ||||||||||||| ||||||| |||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  31473297 tgtaaaaatcacgcaagcaa-cagatccaaaatttccagaactcaaagacaaaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagttt 31473199  T
Q  299 tgaaagcaagaacaa 313  Q
    |||||||||| ||||    
T  31473198 tgaaagcaaggacaa 31473184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 193 - 322
Target Start/End: Original strand, 34281033 - 34281160
Alignment:
Q  193 ttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatct 292  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||||||||||||||    
T  34281033 ttaaacctgtaaaaatcacgcaagcaaacggatctaaaatttccagaataca--gataaagccgtaaccgtaaacacaaaacctagatccataaggatct 34281130  T
Q  293 aagttttgaaagcaagaacaagtaccagaa 322  Q
     |||||||||||||||||| ||||||||||    
T  34281131 gagttttgaaagcaagaacgagtaccagaa 34281160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 101 - 313
Target Start/End: Complemental strand, 34184158 - 34183953
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcga-aaataatatcatagtttaaacc 199  Q
    |||| ||||||||||||| ||| |||||||||||    ||||  ||||||||||||||||||      ||||||| | |||||| |||||||||||||||    
T  34184158 caagcgtttccgaagaaactcaacagaatctccat---aaaatctcaggtaaaactcagaacc-----tcttttcaacaaataaaatcatagtttaaacc 34184067  T
Q  200 tgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaag-ccgtaaccgtaaacacaaaacctggatccataaggatctaagttt 298  Q
    |||||||||||||||||||| |||||| ||||||||||||| ||||||| |||  ||| ||||||||||||||||||| |||||||||||||||| ||||    
T  34184066 tgtaaaaatcacgcaagcaa-cagatccaaaatttccagaactcaaagacaaaaaccgcaaccgtaaacacaaaacctagatccataaggatctatgttt 34183968  T
Q  299 tgaaagcaagaacaa 313  Q
    |||||||||||||||    
T  34183967 tgaaagcaagaacaa 34183953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 162 - 324
Target Start/End: Complemental strand, 16963160 - 16962999
Alignment:
Q  162 cagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaa-tttccagaa-ttcaaagataaagccgtaa 259  Q
    |||||| ||||||| ||| ||||||||  ||| |||||||||||| |||||| || |||||||||||||| ||||||||| ||||||||||||  |||||    
T  16963160 cagaatctcttttcaaaagtaatatcacggtt-aaacctgtaaaa-tcacgcgag-aaacagatctaaaaatttccagaaattcaaagataaaatcgtaa 16963064  T
Q  260 ccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  16963063 ccgtaaacacaaaacctagatccataaggatctaagttttgaaagcaagaacaagcaccagaaaa 16962999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 185 - 324
Target Start/End: Complemental strand, 34801963 - 34801823
Alignment:
Q  185 atcatagtttaaacctgtaaa-aatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcc 282  Q
    ||||||||||||||| ||||| ||||||||||||||| || ||||| | |||||||||| || | | |||||| |||||||||||||||||||| |||||    
T  34801963 atcatagtttaaaccggtaaacaatcacgcaagcaaagcatatctagattttccagaat-cacaaagaaagccataaccgtaaacacaaaacctagatcc 34801865  T
Q  283 ataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  34801864 ataaggatctaagttttgaaagcaagaacaagtaccagaaaa 34801823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 176 - 324
Target Start/End: Complemental strand, 39042814 - 39042665
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaac 274  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||  ||||| ||||||||||||| ||||||  |||||  |||||||||||| ||||||    
T  39042814 gaaaatagtatcatagtttaaacctgtaaaaatcacgtaagcaagaagatcaaaaatttccagaactcaaagtgaaagctataaccgtaaacatcaaaac 39042715  T
Q  275 ctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    || ||||| |||||||| ||| ||||||||||||||| ||||||||||||    
T  39042714 ctagatccgtaaggatcaaagctttgaaagcaagaacgagtaccagaaaa 39042665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 176 - 324
Target Start/End: Complemental strand, 39058148 - 39057999
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaac 274  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||  ||||| ||||||||||||| ||||||  |||||  |||||||||||| ||||||    
T  39058148 gaaaatagtatcatagtttaaacctgtaaaaatcacgtaagcaagaagatcaaaaatttccagaactcaaagtgaaagctataaccgtaaacatcaaaac 39058049  T
Q  275 ctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    || ||||| |||||||| ||| ||||||||||||||| ||||||||||||    
T  39058048 ctagatccgtaaggatcaaagctttgaaagcaagaacgagtaccagaaaa 39057999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 185 - 322
Target Start/End: Complemental strand, 12707506 - 12707370
Alignment:
Q  185 atcatagtttaaacctgtaaa-aatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    |||||||||||| |||||||| ||||||| |||||| || ||| ||||||||||||||||||||| ||  |||||||||||||||| |||||| ||||||    
T  12707506 atcatagtttaagcctgtaaacaatcacgtaagcaagcatatcaaaaatttccagaattcaaagaaaa--ccgtaaccgtaaacacgaaacctagatcca 12707409  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  12707408 taaggatctaagttttgaaagcaagaacgagtactagaa 12707370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 185 - 322
Target Start/End: Complemental strand, 12722906 - 12722770
Alignment:
Q  185 atcatagtttaaacctgtaaa-aatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    |||||||||||| |||||||| ||||||| |||||| || ||| ||||||||||||||||||||| ||  |||||||||||||||| |||||| ||||||    
T  12722906 atcatagtttaagcctgtaaacaatcacgtaagcaagcatatcaaaaatttccagaattcaaagaaaa--ccgtaaccgtaaacacgaaacctagatcca 12722809  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  12722808 taaggatctaagttttgaaagcaagaacgagtactagaa 12722770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 96 - 324
Target Start/End: Original strand, 35762860 - 35763080
Alignment:
Q  96 agaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataa-tatcatagttt 194  Q
    |||||||||| |||||||||||  |||| | |||||||||||||||||||||||||||||||||||     | ||||||| ||| ||| |||||  |||     
T  35762860 agaatcaagt-tttccgaagaatctcacaa-aatctccaatcaaaaacttcaggtaaaactcagaa-----tctcttttcaaaagtaaatatcacggtt- 35762951  T
Q  195 aaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacac-aaaacctggatccataaggatcta 293  Q
    ||||||||||||||||||| ||||| || ||| ||||| ||||||||||||||| ||  |  ||||||||||||| ||||||| ||||| | |||||| |    
T  35762952 aaacctgtaaaaatcacgcgagcaagcatatcaaaaatctccagaattcaaagaaaa--ctataaccgtaaacaccaaaacctagatccgtgaggatcaa 35763049  T
Q  294 agttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||||||||||||||||    
T  35763050 agttttgaaagcaagaacaagtaccagaaaa 35763080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 176 - 321
Target Start/End: Complemental strand, 37942819 - 37942671
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaaa----tcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacaca 270  Q
    ||||||||||||||||||||||||||||||||    |||||| ||||| || ||  |||| |||||||||||||||||  |||||||||| |||||||||    
T  37942819 gaaaataatatcatagtttaaacctgtaaaaaaaaatcacgcgagcaagcatatagaaaaatttccagaattcaaaga--aagccgtaactgtaaacaca 37942722  T
Q  271 aaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    |||||| ||||||||||||||| ||||||||||||||||||||| ||||||    
T  37942721 aaacctagatccataaggatctgagttttgaaagcaagaacaagcaccaga 37942671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 185 - 321
Target Start/End: Original strand, 27797852 - 27797989
Alignment:
Q  185 atcatagtttaaacctgtaaaaa--tcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatc 281  Q
    ||||||||||||||| |||||||  ||||||||||||| |||||| ||||||||||||||||||||| ||  |||||||||||| ||| |||||| ||||    
T  27797852 atcatagtttaaaccggtaaaaaaatcacgcaagcaaaacagatccaaaatttccagaattcaaagaaaa--ccgtaaccgtaagcacgaaacctagatc 27797949  T
Q  282 cataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    | |||||||||||||||||||| |||||||||| ||||||    
T  27797950 cgtaaggatctaagttttgaaaacaagaacaagcaccaga 27797989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 185 - 321
Target Start/End: Original strand, 27812941 - 27813078
Alignment:
Q  185 atcatagtttaaacctgtaaaaa--tcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatc 281  Q
    ||||||||||||||| |||||||  ||||||||||||| |||||| ||||||||||||||||||||| ||  |||||||||||| ||| |||||| ||||    
T  27812941 atcatagtttaaaccggtaaaaaaatcacgcaagcaaaacagatccaaaatttccagaattcaaagaaaa--ccgtaaccgtaagcacgaaacctagatc 27813038  T
Q  282 cataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    | |||||||||||||||||||| |||||||||| ||||||    
T  27813039 cgtaaggatctaagttttgaaaacaagaacaagcaccaga 27813078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 177 - 321
Target Start/End: Original strand, 34273379 - 34273521
Alignment:
Q  177 aaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacct 276  Q
    ||||||||||||||||||||||||| |||| |||||  |  ||||| ||||||| |||||||||| || | | ||| || ||||||||||||||||||||    
T  34273379 aaaataatatcatagtttaaacctgcaaaa-tcacgtgaataaacaaatctaaattttccagaat-cacaaagaaaaccataaccgtaaacacaaaacct 34273476  T
Q  277 ggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
     ||||||||||||||||||||||||||||||||||||| ||||||    
T  34273477 agatccataaggatctaagttttgaaagcaagaacaagcaccaga 34273521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 177 - 321
Target Start/End: Original strand, 34300386 - 34300528
Alignment:
Q  177 aaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacct 276  Q
    ||||||||||||||||||||||||| |||| |||||  |  ||||| ||||||| |||||||||| || | | ||| || ||||||||||||||||||||    
T  34300386 aaaataatatcatagtttaaacctgcaaaa-tcacgtgaataaacaaatctaaattttccagaat-cacaaagaaaaccataaccgtaaacacaaaacct 34300483  T
Q  277 ggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
     ||||||||||||||||||||||||||||||||||||| ||||||    
T  34300484 agatccataaggatctaagttttgaaagcaagaacaagcaccaga 34300528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 10985457 - 10985550
Alignment:
Q  231 atttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||   ||||||||||    
T  10985457 atttccagaattcaaagccaaagccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaagcaagaacgcataccagaaaa 10985550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 185 - 321
Target Start/End: Original strand, 16159846 - 16159984
Alignment:
Q  185 atcatagtttaaacctgtaaaaa---tcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggat 280  Q
    ||||||||||||||| |||||||   ||||||||||||| |||||| | ||||||||||||||||||| ||  |||||||||||| ||| |||||| |||    
T  16159846 atcatagtttaaaccggtaaaaaaaatcacgcaagcaaagcagatccagaatttccagaattcaaagaaaa--ccgtaaccgtaagcacgaaacctagat 16159943  T
Q  281 ccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    || |||||||||||||||||||| |||||||||| ||||||    
T  16159944 ccgtaaggatctaagttttgaaaacaagaacaagcaccaga 16159984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 185 - 321
Target Start/End: Original strand, 16170747 - 16170885
Alignment:
Q  185 atcatagtttaaacctgtaaaaa---tcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggat 280  Q
    ||||||||||||||| |||||||   ||||||||||||| |||||| | ||||||||||||||||||| ||  |||||||||||| ||| |||||| |||    
T  16170747 atcatagtttaaaccggtaaaaaaaatcacgcaagcaaagcagatccagaatttccagaattcaaagaaaa--ccgtaaccgtaagcacgaaacctagat 16170844  T
Q  281 ccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    || |||||||||||||||||||| |||||||||| ||||||    
T  16170845 ccgtaaggatctaagttttgaaaacaagaacaagcaccaga 16170885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 207 - 313
Target Start/End: Complemental strand, 19407438 - 19407333
Alignment:
Q  207 atcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagca 306  Q
    |||||||||||||  ||||| ||||||||||||| |||||||  || |||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  19407438 atcacgcaagcaat-agatccaaaatttccagaactcaaagacgaaaccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaagca 19407340  T
Q  307 agaacaa 313  Q
    |||||||    
T  19407339 agaacaa 19407333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 207 - 313
Target Start/End: Complemental strand, 19422438 - 19422333
Alignment:
Q  207 atcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagca 306  Q
    |||||||||||||  ||||| ||||||||||||| |||||||  || |||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  19422438 atcacgcaagcaat-agatccaaaatttccagaactcaaagacgaaaccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaagca 19422340  T
Q  307 agaacaa 313  Q
    |||||||    
T  19422339 agaacaa 19422333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 321
Target Start/End: Complemental strand, 15707336 - 15707180
Alignment:
Q  162 cagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaatt-caaagataaagccgtaac 260  Q
    |||| ||||| ||| ||||||||||||||||||||||||| |||| |||||  |  ||||| |   ||| ||||||||||  ||||||| || || ||||    
T  15707336 cagagtttctcttcaaaaataatatcatagtttaaacctgcaaaa-tcacgtgaataaacaaa---aaattttccagaatcacaaagatgaaaccataac 15707241  T
Q  261 cgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  15707240 cgtaaacacaaaacctagatccataaggatccaagttttgaaagcaagaacaagcaccaga 15707180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 19551747 - 19551821
Alignment:
Q  250 aaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||    
T  19551747 aaagccgtaaccgtaaacacaaaacctagatccataaggatctaggttttgaaagcaagaacaagtatcagaaaa 19551821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 230 - 322
Target Start/End: Complemental strand, 22919076 - 22918986
Alignment:
Q  230 aatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    ||||||||||||||||||| ||  |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||    
T  22919076 aatttccagaattcaaagaaaa--ccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaagcaagaacgagtactagaa 22918986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 230 - 322
Target Start/End: Complemental strand, 22932186 - 22932096
Alignment:
Q  230 aatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    ||||||||||||||||||| ||  |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||    
T  22932186 aatttccagaattcaaagaaaa--ccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaagcaagaacgagtactagaa 22932096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 130 - 321
Target Start/End: Complemental strand, 13820077 - 13819891
Alignment:
Q  130 ctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacaga-tcta 228  Q
    ||||||||||||||||||||||||||||||||     || |||||| ||| | |||||||||||||| ||||||||| |||||  | ||| |||| || |    
T  13820077 ctccaatcaaaaacttcaggtaaaactcagaa-----ttccttttcaaaagtgatatcatagtttaa-cctgtaaaa-tcacgtgaacaagcagaatcca 13819985  T
Q  229 aaa-tttccagaattcaaagataaagccgtaaccgtaaacac-aaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    ||| ||||||||||| |||  |||| ||  |||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  13819984 aaagtttccagaattaaaaactaaaacca-aaccgtaaacaccaaaacctagatccataaggatccaagttttgaaagcaagaacaagcaccaga 13819891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 324
Target Start/End: Original strand, 37369180 - 37369307
Alignment:
Q  195 aaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacac-aaaacctggatccataaggatcta 293  Q
    |||||||||||| |||||| ||||| || ||| ||||||||||||||||||||| ||  |  ||||||||||||| ||||||| ||||| | |||||| |    
T  37369180 aaacctgtaaaa-tcacgcgagcaagcatatcaaaaatttccagaattcaaagaaaa--ctataaccgtaaacaccaaaacctagatccgtgaggatcaa 37369276  T
Q  294 agttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||| ||||||||||||    
T  37369277 agttttgaaagcaagaacgagtaccagaaaa 37369307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 324
Target Start/End: Original strand, 37387014 - 37387141
Alignment:
Q  195 aaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacac-aaaacctggatccataaggatcta 293  Q
    |||||||||||| |||||| ||||| || ||| ||||||||||||||||||||| ||  |  ||||||||||||| ||||||| ||||| | |||||| |    
T  37387014 aaacctgtaaaa-tcacgcgagcaagcatatcaaaaatttccagaattcaaagaaaa--ctataaccgtaaacaccaaaacctagatccgtgaggatcaa 37387110  T
Q  294 agttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||| ||||||||||||    
T  37387111 agttttgaaagcaagaacgagtaccagaaaa 37387141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 322
Target Start/End: Original strand, 5799735 - 5799874
Alignment:
Q  185 atcatagtttaaacctgtaaaaa--tcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatc 281  Q
    ||||| ||||||||| |||||||  ||||| ||||||   |||| ||||||||||||||||||||| ||| |  |||||||||||| |||||||| ||||    
T  5799735 atcatggtttaaaccggtaaaaaaatcacgtaagcaagaggatc-aaaatttccagaattcaaagagaaaactataaccgtaaacatcaaaacctagatc 5799833  T
Q  282 cataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    | |||||||| | | ||||||||||||||| ||||||||||    
T  5799834 cgtaaggatcaatgctttgaaagcaagaacgagtaccagaa 5799874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 141
Target Start/End: Original strand, 13063616 - 13063673
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaa 141  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||    
T  13063616 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacaaaatctccaagcaaaa 13063673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 26621900 - 26621850
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctcca 134  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  26621900 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacaaaatctcca 26621850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 314
Target Start/End: Complemental strand, 251449 - 251337
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||| |||  |||||||||||||||| ||  |  |||||||||||| ||||| || ||||| |||||||| | |||||    
T  251449 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaagaaaa--ctataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 251352  T
Q  300 gaaagcaagaacaag 314  Q
    |||||| ||||||||    
T  251351 gaaagcgagaacaag 251337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 314
Target Start/End: Complemental strand, 266979 - 266867
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||| |||  |||||||||||||||| ||  |  |||||||||||| ||||| || ||||| |||||||| | |||||    
T  266979 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaagaaaa--ctataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 266882  T
Q  300 gaaagcaagaacaag 314  Q
    |||||| ||||||||    
T  266881 gaaagcgagaacaag 266867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 16820271 - 16820168
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||| |||  |||||||||||||||  ||| || |||||||||||| ||||| || ||||| |||||||| | |||||    
T  16820271 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaaccataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 16820174  T
Q  300 gaaagc 305  Q
    ||||||    
T  16820173 gaaagc 16820168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 16875493 - 16875390
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||| |||  |||||||||||||||  ||| || |||||||||||| ||||| || ||||| |||||||| | |||||    
T  16875493 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaaccataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 16875396  T
Q  300 gaaagc 305  Q
    ||||||    
T  16875395 gaaagc 16875390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 32043868 - 32043971
Alignment:
Q  202 taaaaatcacgcaagc-aaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    |||||||||||||||| ||||||||| |||  |||||||||||||||  ||| || |||||||||||| ||||| || ||||| |||||||| | |||||    
T  32043868 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaaccataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 32043965  T
Q  300 gaaagc 305  Q
    ||||||    
T  32043966 gaaagc 32043971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 32059064 - 32059167
Alignment:
Q  202 taaaaatcacgcaagc-aaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    |||||||||||||||| ||||||||| |||  |||||||||||||||  ||| || |||||||||||| ||||| || ||||| |||||||| | |||||    
T  32059064 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaaccataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 32059161  T
Q  300 gaaagc 305  Q
    ||||||    
T  32059162 gaaagc 32059167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 37919624 - 37919738
Alignment:
Q  96 agaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagttta 195  Q
    |||||||||| || ||| ||||| ||| ||||||||||| ||| |||| ||||||||||||||||||      || |||  ||||||| ||||||||| |    
T  37919624 agaatcaagt-ttcccggagaaactcaacagaatctcca-tcacaaacatcaggtaaaactcagaacc-----tcattttcaaaataaaatcatagtt-a 37919715  T
Q  196 aacctgtaaaaatcacgcaagca 218  Q
    |||||||||||||||||||||||    
T  37919716 aacctgtaaaaatcacgcaagca 37919738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 37934562 - 37934676
Alignment:
Q  96 agaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagttta 195  Q
    |||||||||| || ||| ||||| ||| ||||||||||| ||| |||| ||||||||||||||||||      || |||  ||||||| ||||||||| |    
T  37934562 agaatcaagt-ttcccggagaaactcaacagaatctcca-tcacaaacatcaggtaaaactcagaacc-----tcattttcaaaataaaatcatagtt-a 37934653  T
Q  196 aacctgtaaaaatcacgcaagca 218  Q
    |||||||||||||||||||||||    
T  37934654 aacctgtaaaaatcacgcaagca 37934676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 302
Target Start/End: Complemental strand, 13927547 - 13927447
Alignment:
Q  203 aaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagttttg 300  Q
    ||||| |||||||||||| |||||| |||  |||||||||||||||| ||| |  |||||||||||| ||||| || ||||| |||||||| | ||||||    
T  13927547 aaaaaacacgcaagcaaaacagatccaaaggttccagaattcaaaga-aaaactataaccgtaaacatcaaaatctagatccgtaaggatcaacgttttg 13927449  T
Q  301 aa 302  Q
    ||    
T  13927448 aa 13927447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 302
Target Start/End: Complemental strand, 13942743 - 13942643
Alignment:
Q  203 aaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagttttg 300  Q
    ||||| |||||||||||| |||||| |||  |||||||||||||||| ||| |  |||||||||||| ||||| || ||||| |||||||| | ||||||    
T  13942743 aaaaaacacgcaagcaaaacagatccaaaggttccagaattcaaaga-aaaactataaccgtaaacatcaaaatctagatccgtaaggatcaacgttttg 13942645  T
Q  301 aa 302  Q
    ||    
T  13942644 aa 13942643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1816 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold1816
Description:

Target: scaffold1816; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 84 - 320
Target Start/End: Complemental strand, 1198 - 966
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataa 183  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||  ||||||    
T  1198 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacagaatctccaatcaaaaacttcatgtaaaactcaaaacagaatctcttttcagaaataa 1099  T
Q  184 tatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    ||||| || |||||||| | |||||||||| ||||| || |   ||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  1098 tatcacag-ttaaacctat-aaaatcacgcgagcaagcataatcaaaatttccagaattcaaag--aaagccgtaaccgtaaacacaaaacctagatcca 1003  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccag 320  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  1002 taaggatctaagtcttgaaaacaagaacaagtaccag 966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 8e-55; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 193 - 324
Target Start/End: Complemental strand, 12056725 - 12056596
Alignment:
Q  193 ttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatct 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||||||||||||||    
T  12056725 ttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaataca--gataaagccgtaaccgtaaacacaaaacctagatccataaggatct 12056628  T
Q  293 aagttttgaaagcaagaacaagtaccagaaaa 324  Q
    | ||||||||||||||||||||||||||||||    
T  12056627 aggttttgaaagcaagaacaagtaccagaaaa 12056596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 130 - 324
Target Start/End: Complemental strand, 29892980 - 29892793
Alignment:
Q  130 ctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaa 229  Q
    ||||||||||||||||||||||||||||||||     || ||||||  || | |||||||||||||| ||||||||| |||||| || ||||||||||||    
T  29892980 ctccaatcaaaaacttcaggtaaaactcagaa-----ttccttttcagaagtgatatcatagtttaa-cctgtaaaa-tcacgcgag-aaacagatctaa 29892889  T
Q  230 aa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    || ||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||    
T  29892888 aaatttccagaattcaaagataagaccgtaaccgtaaacacaaaacctagatccataaggacctaagttttgaaagcaagaacaagcaccagaaaa 29892793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 101 - 313
Target Start/End: Original strand, 43072205 - 43072410
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcga-aaataatatcatagtttaaacc 199  Q
    |||| ||||||||||||| ||| |||||||||||   ||||||| |||||||||||||||||      ||||||| | |||||| |||||||||||||||    
T  43072205 caagcgtttccgaagaaactcaacagaatctccat--aaaaact-caggtaaaactcagaacc-----tcttttcaacaaataaaatcatagtttaaacc 43072296  T
Q  200 tgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaag-ccgtaaccgtaaacacaaaacctggatccataaggatctaagttt 298  Q
    |||||||||||||||||||| |||||| ||||||||||||| ||||||| |||  ||| ||||||||||||||||||| |||||||||||||||||||||    
T  43072297 tgtaaaaatcacgcaagcaa-cagatccaaaatttccagaactcaaagacaaaaaccgcaaccgtaaacacaaaacctagatccataaggatctaagttt 43072395  T
Q  299 tgaaagcaagaacaa 313  Q
    |||||||||||||||    
T  43072396 tgaaagcaagaacaa 43072410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 101 - 313
Target Start/End: Original strand, 43087492 - 43087697
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcga-aaataatatcatagtttaaacc 199  Q
    |||| ||||||||||||| ||| |||||||||||   ||||||| |||||||||||||||||      ||||||| | |||||| |||||||||||||||    
T  43087492 caagcgtttccgaagaaactcaacagaatctccat--aaaaact-caggtaaaactcagaacc-----tcttttcaacaaataaaatcatagtttaaacc 43087583  T
Q  200 tgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaag-ccgtaaccgtaaacacaaaacctggatccataaggatctaagttt 298  Q
    |||||||||||||||||||| |||||| ||||||||||||| ||||||| |||  ||| ||||||||||||||||||| |||||||||||||||||||||    
T  43087584 tgtaaaaatcacgcaagcaa-cagatccaaaatttccagaactcaaagacaaaaaccgcaaccgtaaacacaaaacctagatccataaggatctaagttt 43087682  T
Q  299 tgaaagcaagaacaa 313  Q
    |||||||||||||||    
T  43087683 tgaaagcaagaacaa 43087697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 176 - 321
Target Start/End: Original strand, 42136897 - 42137040
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacc 275  Q
    |||||||||||||||||||||||||||||||||||||| ||||| || ||| ||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  42136897 gaaaataatatcatagtttaaacctgtaaaaatcacgcgagcaagcatatcaaaaatttccagaattcaaag--aaagctgtaaccgtaaacacaaaacc 42136994  T
Q  276 tggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    | ||||||||||||||| |||||||||||| |||||||| ||||||    
T  42136995 tagatccataaggatctgagttttgaaagcgagaacaagcaccaga 42137040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 130 - 321
Target Start/End: Original strand, 27282521 - 27282716
Alignment:
Q  130 ctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatct-- 227  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||| | |||||||||||| ||||||| |||||||||  | |||||||||||      
T  27282521 ctccaatcaaaaacttcaggtaaaactcagaacaaaatttcttttcaaaagtgatatcatagttt-aacctgt-aaaatcacgtgaacaaacagatctaa 27282618  T
Q  228 --aaaatttccagaat-tcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
      ||||||||||||||  ||||||||||  | |||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  27282619 aaaaaatttccagaatcacaaagataaaatcataaccgtaaacaccaaaacctagatccataaggatccaagttttgaaagcaagaacaagcaccaga 27282716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 130 - 321
Target Start/End: Original strand, 26772282 - 26772478
Alignment:
Q  130 ctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatct-- 227  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||| | |||||||||||| ||||||| |||||||||  | |||||||||||      
T  26772282 ctccaatcaaaaacttcaggtaaaactcagaacaaaatttcttttcaaaagtgatatcatagttt-aacctgt-aaaatcacgtgaacaaacagatctaa 26772379  T
Q  228 ---aaaatttccagaat-tcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
       ||||||||||||||  ||||||||||  | |||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  26772380 aaaaaaatttccagaatcacaaagataaaatcataaccgtaaacaccaaaacctagatccataaggatccaagttttgaaagcaagaacaagcaccaga 26772478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 185 - 324
Target Start/End: Complemental strand, 24786356 - 24786216
Alignment:
Q  185 atcatagtttaaacctgtaaa-aatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcc 282  Q
    ||||||||||||||| ||||| ||||||||||||||| || ||||| | |||||||||| || | | |||||| |||||||||||||||||||| |||||    
T  24786356 atcatagtttaaaccggtaaacaatcacgcaagcaaagcatatctagattttccagaat-cacaaagaaagccataaccgtaaacacaaaacctagatcc 24786258  T
Q  283 ataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24786257 ataaggatctaagttttgaaagcaagaacaagtaccagaaaa 24786216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 101 - 322
Target Start/End: Complemental strand, 18491626 - 18491409
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcga-aaataatatcatagtttaaacc 199  Q
    |||| ||||||||||||| ||| ||||||||||| | ||||||| |||||||||||||||||      ||||||| | ||||| ||||||||||||||||    
T  18491626 caagcgtttccgaagaaactcaacagaatctcca-taaaaaact-caggtaaaactcagaacc-----tcttttcaacaaatagtatcatagtttaaacc 18491534  T
Q  200 tgtaaaaa-tcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtt 297  Q
    |||||||| ||||| ||||||  ||||| ||||||||||||||||| ||| ||| |  |||||||||||| |||||||| ||||| |||||||| ||| |    
T  18491533 tgtaaaaaatcacgtaagcaagaagatcaaaaatttccagaattcagagagaaaactataaccgtaaacatcaaaacctagatccgtaaggatcaaagct 18491434  T
Q  298 ttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||| ||||||||||    
T  18491433 ttgaaagcaagaacgagtaccagaa 18491409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 101 - 322
Target Start/End: Complemental strand, 18506941 - 18506724
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcga-aaataatatcatagtttaaacc 199  Q
    |||| ||||||||||||| ||| ||||||||||| | ||||||| |||||||||||||||||      ||||||| | ||||| ||||||||||||||||    
T  18506941 caagcgtttccgaagaaactcaacagaatctcca-taaaaaact-caggtaaaactcagaacc-----tcttttcaacaaatagtatcatagtttaaacc 18506849  T
Q  200 tgtaaaaa-tcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtt 297  Q
    |||||||| ||||| ||||||  ||||| ||||||||||||||||| ||| ||| |  |||||||||||| |||||||| ||||| |||||||| ||| |    
T  18506848 tgtaaaaaatcacgtaagcaagaagatcaaaaatttccagaattcagagagaaaactataaccgtaaacatcaaaacctagatccgtaaggatcaaagct 18506749  T
Q  298 ttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||| ||||||||||    
T  18506748 ttgaaagcaagaacgagtaccagaa 18506724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 176 - 324
Target Start/End: Original strand, 28643147 - 28643296
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaaa-tcacgcaagcaaacagatctaaaa--tttccagaattcaaagataaagccgtaaccgtaaacacaaa 272  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| || ||| ||||  ||||||||||||||||| ||  |||||||||||| ||| ||    
T  28643147 gaaaataatatcatagtttaaccctgtaaaaaatcacgcaagcaagcatatcaaaaaaatttccagaattcaaagaaaa--ccgtaaccgtaagcacgaa 28643244  T
Q  273 acctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||| |||||||||||||||||||||||||| || ||||||||| |||||||    
T  28643245 acctagatccataaggatctaagttttgaaaacacgaacaagtatcagaaaa 28643296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 176 - 324
Target Start/End: Original strand, 28658552 - 28658701
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaaa-tcacgcaagcaaacagatctaaaa--tttccagaattcaaagataaagccgtaaccgtaaacacaaa 272  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| || ||| ||||  ||||||||||||||||| ||  |||||||||||| ||| ||    
T  28658552 gaaaataatatcatagtttaaccctgtaaaaaatcacgcaagcaagcatatcaaaaaaatttccagaattcaaagaaaa--ccgtaaccgtaagcacgaa 28658649  T
Q  273 acctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||| |||||||||||||||||||||||||| || ||||||||| |||||||    
T  28658650 acctagatccataaggatctaagttttgaaaacacgaacaagtatcagaaaa 28658701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 202 - 313
Target Start/End: Original strand, 6868456 - 6868568
Alignment:
Q  202 taaaaatcacgcaagcaaac-agatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttg 300  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  6868456 taaaaatcacgcaagcaaaatagatccaaaatttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagttttg 6868555  T
Q  301 aaagcaagaacaa 313  Q
    ||||||| |||||    
T  6868556 aaagcaaaaacaa 6868568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 202 - 313
Target Start/End: Original strand, 6883580 - 6883692
Alignment:
Q  202 taaaaatcacgcaagcaaac-agatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttg 300  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  6883580 taaaaatcacgcaagcaaaatagatccaaaatttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagttttg 6883679  T
Q  301 aaagcaagaacaa 313  Q
    ||||||| |||||    
T  6883680 aaagcaaaaacaa 6883692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 204 - 324
Target Start/End: Original strand, 28572570 - 28572689
Alignment:
Q  204 aaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaa 302  Q
    |||||||||||||||| || |||||||| ||||||||||||||||| ||  |||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  28572570 aaaatcacgcaagcaagcatatctaaaaatttccagaattcaaagaaaa--ccgtaaccgtaagcacgaaacctagatccataaggatctaagttttgaa 28572667  T
Q  303 agcaagaacaagtaccagaaaa 324  Q
    ||||||||| ||||||||||||    
T  28572668 agcaagaacgagtaccagaaaa 28572689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 313
Target Start/End: Complemental strand, 32587142 - 32587037
Alignment:
Q  207 atcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagca 306  Q
    ||||||||||||| |||||| ||||||||||||| |||||||  || ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32587142 atcacgcaagcaa-cagatccaaaatttccagaactcaaagacgaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaagca 32587044  T
Q  307 agaacaa 313  Q
    |||||||    
T  32587043 agaacaa 32587037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 313
Target Start/End: Complemental strand, 32605571 - 32605466
Alignment:
Q  207 atcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagca 306  Q
    ||||||||||||| |||||| ||||||||||||| |||||||  || ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32605571 atcacgcaagcaa-cagatccaaaatttccagaactcaaagacgaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaagca 32605473  T
Q  307 agaacaa 313  Q
    |||||||    
T  32605472 agaacaa 32605466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 185 - 322
Target Start/End: Complemental strand, 13433484 - 13433346
Alignment:
Q  185 atcatagtttaaacctgtaaa-aatcacgcaagcaaa-cagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatc 281  Q
    ||||||||||||||||||||| |||||||| |||||| || ||| |||| ||||||||||||||||| ||  |||||||||||||||| |||||| ||||    
T  13433484 atcatagtttaaacctgtaaacaatcacgcgagcaaagcatatcaaaaaatttccagaattcaaagaaaa--ccgtaaccgtaaacacgaaacctagatc 13433387  T
Q  282 cataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||||||||||||||||||| ||||| ||||    
T  13433386 cataaggatctaagttttgaaagcaagaacgagtactagaa 13433346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 185 - 322
Target Start/End: Complemental strand, 13444378 - 13444240
Alignment:
Q  185 atcatagtttaaacctgtaaa-aatcacgcaagcaaa-cagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatc 281  Q
    ||||||||||||||||||||| |||||||| |||||| || ||| |||| ||||||||||||||||| ||  |||||||||||||||| |||||| ||||    
T  13444378 atcatagtttaaacctgtaaacaatcacgcgagcaaagcatatcaaaaaatttccagaattcaaagaaaa--ccgtaaccgtaaacacgaaacctagatc 13444281  T
Q  282 cataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||||||||||||||||||| ||||| ||||    
T  13444280 cataaggatctaagttttgaaagcaagaacgagtactagaa 13444240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 127 - 324
Target Start/End: Original strand, 2504959 - 2505152
Alignment:
Q  127 aatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaa----taatatcatagtttaaacctgtaaaaatcacgcaagcaa-ac 221  Q
    |||||||||||||||| ||||||||||||||||||       ||||||  ||||    |||||||| |||| || |||||||||| || |||||||| ||    
T  2504959 aatctccaatcaaaaatttcaggtaaaactcagaa-------tctttttaaaaaaatataatatcacagttgaa-cctgtaaaaa-catgcaagcaacac 2505049  T
Q  222 agatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    |||||||| ||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || | |||||||    
T  2505050 agatctaagatttccagaattcaaaagcgaagccgtaaccgtaaacacaaaacctagatccataaggatctaaattttgaaagcaaggacgaataccaga 2505149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 127 - 324
Target Start/End: Original strand, 2520279 - 2520472
Alignment:
Q  127 aatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaa----taatatcatagtttaaacctgtaaaaatcacgcaagcaa-ac 221  Q
    |||||||||||||||| ||||||||||||||||||       ||||||  ||||    |||||||| |||| || |||||||||| || |||||||| ||    
T  2520279 aatctccaatcaaaaatttcaggtaaaactcagaa-------tctttttaaaaaaatataatatcacagttgaa-cctgtaaaaa-catgcaagcaacac 2520369  T
Q  222 agatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    |||||||| ||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || | |||||||    
T  2520370 agatctaagatttccagaattcaaaagcgaagccgtaaccgtaaacacaaaacctagatccataaggatctaaattttgaaagcaaggacgaataccaga 2520469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 193 - 322
Target Start/End: Original strand, 24675395 - 24675523
Alignment:
Q  193 ttaaacctgtaaa-aatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatc 291  Q
    |||| |||||||| ||||||| |||||| || ||| ||||||||||||||||||||| ||  |||||||||||||||| |||||| ||||||||||||||    
T  24675395 ttaagcctgtaaacaatcacgtaagcaagcatatcaaaaatttccagaattcaaagaaaa--ccgtaaccgtaaacacgaaacctagatccataaggatc 24675492  T
Q  292 taagttttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||||||||| ||||| ||||    
T  24675493 taagttttgaaagcaagaacgagtactagaa 24675523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 193 - 322
Target Start/End: Original strand, 24717922 - 24718050
Alignment:
Q  193 ttaaacctgtaaa-aatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatc 291  Q
    |||| |||||||| ||||||| |||||| || ||| ||||||||||||||||||||| ||  |||||||||||||||| |||||| ||||||||||||||    
T  24717922 ttaagcctgtaaacaatcacgtaagcaagcatatcaaaaatttccagaattcaaagaaaa--ccgtaaccgtaaacacgaaacctagatccataaggatc 24718019  T
Q  292 taagttttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||||||||| ||||| ||||    
T  24718020 taagttttgaaagcaagaacgagtactagaa 24718050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 193 - 322
Target Start/End: Original strand, 24733382 - 24733510
Alignment:
Q  193 ttaaacctgtaaa-aatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatc 291  Q
    |||| |||||||| ||||||| |||||| || ||| ||||||||||||||||||||| ||  |||||||||||||||| |||||| ||||||||||||||    
T  24733382 ttaagcctgtaaacaatcacgtaagcaagcatatcaaaaatttccagaattcaaagaaaa--ccgtaaccgtaaacacgaaacctagatccataaggatc 24733479  T
Q  292 taagttttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||||||||| ||||| ||||    
T  24733480 taagttttgaaagcaagaacgagtactagaa 24733510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 15749776 - 15749683
Alignment:
Q  231 atttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||   ||||||||||    
T  15749776 atttccagaattcaaagccaaagccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaagcaagaacgcataccagaaaa 15749683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 15765004 - 15764911
Alignment:
Q  231 atttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||   ||||||||||    
T  15765004 atttccagaattcaaagccaaagccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaagcaagaacgcataccagaaaa 15764911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 127 - 314
Target Start/End: Complemental strand, 37677651 - 37677470
Alignment:
Q  127 aatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaata--atatcatagtttaaacctgtaaaaatcacgcaagcaa-acag 223  Q
    |||||||||||||||| ||||||||||||||||||       ||||||  ||||||  |||||| |||| || |||||||||| || |||||||| ||||    
T  37677651 aatctccaatcaaaaatttcaggtaaaactcagaa-------tctttttaaaaatataatatcacagttgaa-cctgtaaaaa-catgcaagcaacacag 37677561  T
Q  224 atctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaag 314  Q
    |||||| ||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| | ||||||    
T  37677560 atctaagatttccagaattcaaaagcgaagccgtaaccgtaaacacaaaacctagatccataaggatctaagtgttgaaagcgaaaacaag 37677470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 177 - 321
Target Start/End: Complemental strand, 15649641 - 15649499
Alignment:
Q  177 aaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacct 276  Q
    ||||||||||||||||||||||||| |||| |||||  |  ||||| ||||||| |||||||||| || | | ||| || ||||||||||||||||||||    
T  15649641 aaaataatatcatagtttaaacctgcaaaa-tcacgtgaataaacaaatctaaattttccagaat-cacaaagaaaaccataaccgtaaacacaaaacct 15649544  T
Q  277 ggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
     ||||| ||||||||||||||||||||||||||||||| ||||||    
T  15649543 agatccctaaggatctaagttttgaaagcaagaacaagcaccaga 15649499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 177 - 321
Target Start/End: Complemental strand, 15665017 - 15664875
Alignment:
Q  177 aaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacct 276  Q
    ||||||||||||||||||||||||| |||| |||||  |  ||||| ||||||| |||||||||| || | | ||| || ||||||||||||||||||||    
T  15665017 aaaataatatcatagtttaaacctgcaaaa-tcacgtgaataaacaaatctaaattttccagaat-cacaaagaaaaccataaccgtaaacacaaaacct 15664920  T
Q  277 ggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
     ||||| ||||||||||||||||||||||||||||||| ||||||    
T  15664919 agatccctaaggatctaagttttgaaagcaagaacaagcaccaga 15664875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 176 - 324
Target Start/End: Original strand, 28912352 - 28912502
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaaa--tcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaa 272  Q
    ||||||| ||||||||||||||||||||||||  ||||| ||||||  ||||| ||||||||||||||||||||  |||||  |||||||||||| ||||    
T  28912352 gaaaatagtatcatagtttaaacctgtaaaaaaatcacgtaagcaagaagatc-aaaatttccagaattcaaagtgaaagctataaccgtaaacatcaaa 28912450  T
Q  273 acctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||| ||||| |||||||| ||| ||||||||||||||| ||||| ||||||    
T  28912451 acctagatccgtaaggatcaaagctttgaaagcaagaacgagtactagaaaa 28912502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 176 - 324
Target Start/End: Original strand, 28927620 - 28927770
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaaa--tcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaa 272  Q
    ||||||| ||||||||||||||||||||||||  ||||| ||||||  ||||| ||||||||||||||||||||  |||||  |||||||||||| ||||    
T  28927620 gaaaatagtatcatagtttaaacctgtaaaaaaatcacgtaagcaagaagatc-aaaatttccagaattcaaagtgaaagctataaccgtaaacatcaaa 28927718  T
Q  273 acctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||| ||||| |||||||| ||| ||||||||||||||| ||||| ||||||    
T  28927719 acctagatccgtaaggatcaaagctttgaaagcaagaacgagtactagaaaa 28927770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 30143829 - 30143921
Alignment:
Q  228 aaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||    
T  30143829 aaaatttccagaattcaaaga--aagccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaagcaagaacgagtactagaa 30143921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 30177879 - 30177971
Alignment:
Q  228 aaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||    
T  30177879 aaaatttccagaattcaaaga--aagccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaagcaagaacgagtactagaa 30177971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 127 - 314
Target Start/End: Complemental strand, 37662368 - 37662187
Alignment:
Q  127 aatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaata--atatcatagtttaaacctgtaaaaatcacgcaagcaa-acag 223  Q
    |||||||||||||||| ||||||||||||||||||       ||||||  ||||||  |||||| |||| || |||||||||| || |||||||| ||||    
T  37662368 aatctccaatcaaaaatttcaggtaaaactcagaa-------tctttttaaaaatataatatcacagttgaa-cctgtaaaaa-catgcaagcaacacag 37662278  T
Q  224 atctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaag 314  Q
    |||||| ||||||||||||||||    |||||||||||||||||||||||||| |||| |||||||||||||| |||||||| | ||||||    
T  37662277 atctaagatttccagaattcaaaagcgaagccgtaaccgtaaacacaaaacctagatctataaggatctaagtgttgaaagcgaaaacaag 37662187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 176 - 314
Target Start/End: Original strand, 37726052 - 37726194
Alignment:
Q  176 gaaaataatatcatagtttaaa-cctgt---aaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-ca 270  Q
    ||||||| |||||||||||||| |||||   ||||||||||||||||| |||||| ||||||||||||| ||||||| ||| | ||||||||||||| ||    
T  37726052 gaaaatagtatcatagtttaaaacctgtcaaaaaaatcacgcaagcaa-cagatccaaaatttccagaactcaaagacaaaactgtaaccgtaaacatca 37726150  T
Q  271 aaacctggatccataaggatctaagttttgaaagcaagaacaag 314  Q
    |||||| ||||| |||||||| | ||||||||||||||||||||    
T  37726151 aaacctagatccgtaaggatcaacgttttgaaagcaagaacaag 37726194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 5632153 - 5632245
Alignment:
Q  228 aaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    ||||||||||||||||||||| ||  | |||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| ||||| ||||    
T  5632153 aaaatttccagaattcaaagaaaa--ctgtaaccgtaaacacgaaacctagatccataaggatctaggttttgaaagcaagaacgagtactagaa 5632245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 130 - 321
Target Start/End: Complemental strand, 42065530 - 42065343
Alignment:
Q  130 ctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacaga-tcta 228  Q
    ||||||||||||||||||||||||||||| |||     | |||||| ||| | |||||||||||||| ||||||||| |||||  | |||||||| || |    
T  42065530 ctccaatcaaaaacttcaggtaaaactcaaaac-----tccttttcaaaagtgatatcatagtttaa-cctgtaaaa-tcacgtgaacaaacagaatcca 42065438  T
Q  229 aaa-tttccagaattcaaaga-taaagccgtaaccgtaaacac-aaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    ||| ||||||||||  ||| | |||| ||  |||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  42065437 aaagtttccagaatcaaaaaactaaaacca-aaccgtaaacaccaaaacctagatccataaggatccaagttttgaaagcaagaacaagcaccaga 42065343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 5647027 - 5647119
Alignment:
Q  228 aaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    |||||||| |||||||||||| ||  | |||||| ||||||| |||||| |||||||||||||||| ||||||||||||||||| ||||| ||||    
T  5647027 aaaatttcaagaattcaaagaaaa--ctgtaaccataaacacgaaacctagatccataaggatctaggttttgaaagcaagaacgagtactagaa 5647119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 7814728 - 7814778
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctcca 134  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  7814728 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacaaaatctcca 7814778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 34498546 - 34498496
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctcca 134  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  34498546 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacaaaatctcca 34498496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 37649574 - 37649638
Alignment:
Q  257 taaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    ||||||||| |||||||||| |||||||||||||| ||| |||| ||||||||||||| ||||||    
T  37649574 taaccgtaagcacaaaacctagatccataaggatccaagctttgtaagcaagaacaagcaccaga 37649638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 33510440 - 33510543
Alignment:
Q  202 taaaaatcacgcaagc-aaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    |||||||||||||||| ||||||||| |||  |||||||||||||||  ||| || |||||||||||| ||||| || ||||| |||||||| | |||||    
T  33510440 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaaccataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 33510537  T
Q  300 gaaagc 305  Q
    ||||||    
T  33510538 gaaagc 33510543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 33525703 - 33525806
Alignment:
Q  202 taaaaatcacgcaagc-aaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    |||||||||||||||| ||||||||| |||  |||||||||||||||  ||| || |||||||||||| ||||| || ||||| |||||||| | |||||    
T  33525703 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaaccataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 33525800  T
Q  300 gaaagc 305  Q
    ||||||    
T  33525801 gaaagc 33525806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 13315527 - 13315484
Alignment:
Q  271 aaacctggatccataaggatctaagttttgaaagcaagaacaag 314  Q
    |||||| |||||||||||||||||||||||||| ||||||||||    
T  13315527 aaacctagatccataaggatctaagttttgaaaacaagaacaag 13315484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 13330854 - 13330811
Alignment:
Q  271 aaacctggatccataaggatctaagttttgaaagcaagaacaag 314  Q
    |||||| |||||||||||||||||||||||||| ||||||||||    
T  13330854 aaacctagatccataaggatctaagttttgaaaacaagaacaag 13330811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 314
Target Start/End: Original strand, 31425467 - 31425593
Alignment:
Q  185 atcatagtttaaacctgtaaaaatcacgcaagcaaac-agatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatcc 282  Q
    |||||||||| |||||||||||||||||||||| ||  | ||| |||||| ||||||| || |    || || |||||||||| | | ||| || |||||    
T  31425467 atcatagtttgaacctgtaaaaatcacgcaagcgaagtatatcaaaaatt-ccagaatacaga----aaaccataaccgtaaaaagcgaaatctagatcc 31425561  T
Q  283 ataaggatctaagttttgaaagcaagaacaag 314  Q
    ||||||||||||||||||||| ||||||||||    
T  31425562 ataaggatctaagttttgaaaacaagaacaag 31425593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 314
Target Start/End: Original strand, 31440805 - 31440931
Alignment:
Q  185 atcatagtttaaacctgtaaaaatcacgcaagcaaac-agatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatcc 282  Q
    |||||||||| |||||||||||||||||||||| ||  | ||| |||||| ||||||| || |    || || |||||||||| | | ||| || |||||    
T  31440805 atcatagtttgaacctgtaaaaatcacgcaagcgaagtatatcaaaaatt-ccagaatacaga----aaaccataaccgtaaaaagcgaaatctagatcc 31440899  T
Q  283 ataaggatctaagttttgaaagcaagaacaag 314  Q
    ||||||||||||||||||||| ||||||||||    
T  31440900 ataaggatctaagttttgaaaacaagaacaag 31440931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 32597754 - 32597640
Alignment:
Q  96 agaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagttta 195  Q
    |||||||||| || ||| ||||| ||| ||||||||||| ||| |||| ||||||||||||||||||      || |||  ||||||| ||||||||| |    
T  32597754 agaatcaagt-ttcccggagaaactcaacagaatctcca-tcacaaacatcaggtaaaactcagaacc-----tcattttcaaaataaaatcatagtt-a 32597663  T
Q  196 aacctgtaaaaatcacgcaagca 218  Q
    |||||||||||||||||||||||    
T  32597662 aacctgtaaaaatcacgcaagca 32597640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 29973185 - 29973082
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||| |||  |||||||||||||||  ||| |  |||||||||||| ||||| |  ||||| |||||||| | |||||    
T  29973185 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaactataaccgtaaacatcaaaatccagatccgtaaggatcaacgtttt 29973088  T
Q  300 gaaagc 305  Q
    ||||||    
T  29973087 gaaagc 29973082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 30023458 - 30023561
Alignment:
Q  202 taaaaatcacgcaagc-aaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    |||||||||||||||| ||||||||| |||  |||||||||||||||  ||| |  |||||||||||| ||||| |  ||||| |||||||| | |||||    
T  30023458 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaactataaccgtaaacatcaaaatccagatccgtaaggatcaacgtttt 30023555  T
Q  300 gaaagc 305  Q
    ||||||    
T  30023556 gaaagc 30023561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 30038722 - 30038825
Alignment:
Q  202 taaaaatcacgcaagc-aaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    |||||||||||||||| ||||||||| |||  |||||||||||||||  ||| |  |||||||||||| ||||| |  ||||| |||||||| | |||||    
T  30038722 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaactataaccgtaaacatcaaaatccagatccgtaaggatcaacgtttt 30038819  T
Q  300 gaaagc 305  Q
    ||||||    
T  30038820 gaaagc 30038825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 23395953 - 23396010
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaa 161  Q
    |||||||||||||||||| ||| |||||||||||   |||||| |||||||||||||||||    
T  23395953 caagtgtttccgaagaaactcaacagaatctcca--taaaaac-tcaggtaaaactcagaa 23396010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 176 - 324
Target Start/End: Original strand, 2342 - 2489
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaaa-tcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaac 274  Q
    |||||||||||||||||||||||||||||||| |||||||||||| || ||| |||||||||||||||||  ||||||||||||||||||||||||||||    
T  2342 gaaaataatatcatagtttaaacctgtaaaaaatcacgcaagcaagcatatcaaaaatttccagaattca--gataaagccgtaaccgtaaacacaaaac 2439  T
Q  275 ctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    || |||||| |||||||||||||||||||||||||||||||| |||||||    
T  2440 ctagatccacaaggatctaagttttgaaagcaagaacaagtatcagaaaa 2489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 5e-53; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 176 - 322
Target Start/End: Complemental strand, 30728285 - 30728139
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaa-cagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaa 273  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||  |||||||||||||||||||||||||||    
T  30728285 gaaaatagtatcatagtttaaacctgtaaaaatcacgcaagcaaaacagatctaaaaatttccagaataca--gataaagccgtaaccgtaaacacaaaa 30728188  T
Q  274 cctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  30728187 cctagatccataaggatctaagttttgaaagcaagaacgagtaccagaa 30728139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 28579044 - 28579137
Alignment:
Q  231 atttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||  || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||    
T  28579044 atttccagaattcaaagccaaggccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaagcaagaacgcgtaccagaaaa 28579137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 28594470 - 28594563
Alignment:
Q  231 atttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||  || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||    
T  28594470 atttccagaattcaaagccaaggccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaagcaagaacgcgtaccagaaaa 28594563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 185 - 324
Target Start/End: Original strand, 36507153 - 36507291
Alignment:
Q  185 atcatagtttaaa-cctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    ||||||||||||| ||||||||||||||| |||| |  |||    |||||||||||| ||||||| ||| || ||||||||||||| |||||| ||||||    
T  36507153 atcatagtttaaagcctgtaaaaatcacgtaagcgagaagaat--aaatttccagaactcaaagagaaaaccataaccgtaaacacgaaacctagatcca 36507250  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  36507251 taaggatctaagttttgaaagcaagaacgagtaccagaaaa 36507291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 176 - 324
Target Start/End: Original strand, 16671362 - 16671512
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaaa--tcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaa 272  Q
    ||||||| ||||||||||||||||||||||||  ||||| ||||||  ||||| ||||||||||||||||||||  |||||  |||||||||||| ||||    
T  16671362 gaaaatagtatcatagtttaaacctgtaaaaaaatcacgtaagcaagaagatc-aaaatttccagaattcaaagtgaaagctataaccgtaaacatcaaa 16671460  T
Q  273 acctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||| ||||| |||||||| ||| ||||||||||||||| ||||| ||||||    
T  16671461 acctagatccgtaaggatcaaagctttgaaagcaagaacgagtactagaaaa 16671512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 203 - 314
Target Start/End: Original strand, 47200997 - 47201108
Alignment:
Q  203 aaaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttga 301  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||||  ||| ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  47200997 aaaaatcacgcaagcag-cagatctaaaaatttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacttagatccataaggatctaagttttga 47201095  T
Q  302 aagcaagaacaag 314  Q
    |||||| ||||||    
T  47201096 aagcaaaaacaag 47201108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 207 - 313
Target Start/End: Complemental strand, 41784281 - 41784176
Alignment:
Q  207 atcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagca 306  Q
    |||||||||||||  ||||| ||||||||||||| |||||||  || |||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  41784281 atcacgcaagcaat-agatccaaaatttccagaactcaaagacgaaaccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaagca 41784183  T
Q  307 agaacaa 313  Q
    |||||||    
T  41784182 agaacaa 41784176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 207 - 313
Target Start/End: Complemental strand, 41799549 - 41799444
Alignment:
Q  207 atcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagca 306  Q
    |||||||||||||  ||||| ||||||||||||| |||||||  || |||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  41799549 atcacgcaagcaat-agatccaaaatttccagaactcaaagacgaaaccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaagca 41799451  T
Q  307 agaacaa 313  Q
    |||||||    
T  41799450 agaacaa 41799444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 14893771 - 14893863
Alignment:
Q  228 aaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    ||||||||||||||||||||| ||  |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||    
T  14893771 aaaatttccagaattcaaagaaaa--ccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaagcaagaacgagtactagaa 14893863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 47353939 - 47353856
Alignment:
Q  231 atttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaag 314  Q
    |||||||||||||||||  || |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  47353939 atttccagaattcaaagccaaggccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaaacaagaacaag 47353856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 10937586 - 10937660
Alignment:
Q  250 aaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||    
T  10937586 aaagccgtaaccgtaaacacaaaacctagatccataaggatctaggttttgaaagcaagaacaagtatcagaaaa 10937660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 10956777 - 10956851
Alignment:
Q  250 aaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||    
T  10956777 aaagccgtaaccgtaaacacaaaacctagatccataaggatctaggttttgaaagcaagaacaagtatcagaaaa 10956851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 10972000 - 10972074
Alignment:
Q  250 aaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||    
T  10972000 aaagccgtaaccgtaaacacaaaacctagatccataaggatctaggttttgaaagcaagaacaagtatcagaaaa 10972074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 139 - 314
Target Start/End: Original strand, 47766552 - 47766717
Alignment:
Q  139 aaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccag 238  Q
    |||||||||||||||||||||||     ||||||||| |||| ||||||||||||||| |||| |||| |||||  |  |||||||   ||| |||||||    
T  47766552 aaaacttcaggtaaaactcagaa-----tttcttttcaaaaacaatatcatagtttaa-cctgcaaaa-tcacgtgaataaacagaa--aaattttccag 47766642  T
Q  239 aattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaag 314  Q
    ||| || | | ||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47766643 aat-cacaaagaaaaccataaccgtaaacacaaaacctagatccataaggatctaagttttgaaagcaagaacaag 47766717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 4148876 - 4148826
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctcca 134  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  4148876 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacaaaatctcca 4148826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 176 - 324
Target Start/End: Complemental strand, 28353035 - 28352888
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaa-atcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaac 274  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| || ||| ||||||||||||||| |  |||||||||||||||||||||||||||     
T  28353035 gaaaataatatcatagtttaaacctgtaaaagatcacgcaagcaagcatatcaaaaatttccagaattta--gataaagccgtaaccgtaaacacaaaat 28352938  T
Q  275 ctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    || |||||  ||||||||||||||||||||||||||| ||||||||||||    
T  28352937 ctagatccgcaaggatctaagttttgaaagcaagaacgagtaccagaaaa 28352888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 176 - 324
Target Start/End: Complemental strand, 28368220 - 28368073
Alignment:
Q  176 gaaaataatatcatagtttaaacctgtaaaa-atcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaac 274  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| || ||| ||||||||||||||| |  |||||||||||||||||||||||||||     
T  28368220 gaaaataatatcatagtttaaacctgtaaaagatcacgcaagcaagcatatcaaaaatttccagaattta--gataaagccgtaaccgtaaacacaaaat 28368123  T
Q  275 ctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    || |||||  ||||||||||||||||||||||||||| ||||||||||||    
T  28368122 ctagatccgcaaggatctaagttttgaaagcaagaacgagtaccagaaaa 28368073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 185 - 324
Target Start/End: Complemental strand, 19510199 - 19510059
Alignment:
Q  185 atcatagtttaaacctgtaaa-aatcacgcaagcaaa-cagatcta-aaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatc 281  Q
    ||||||||||||||||||||| ||||||||||||||| || ||| | |||||||||||||||||||| ||  ||||||||||||||||||||||| ||||    
T  19510199 atcatagtttaaacctgtaaacaatcacgcaagcaaagcatatcaagaaatttccagaattcaaagaaaa--ccgtaaccgtaaacacaaaacctagatc 19510102  T
Q  282 cataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  19510101 cataaggatctaagttttgaaagcaagaacaagcaccagaaaa 19510059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 202 - 313
Target Start/End: Complemental strand, 19199368 - 19199256
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttg 300  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19199368 taaaaatcacgcaagcaaaacagatccaaaatttccagaattcaaaaccaaagccgtaaccgtaaacacaaaacctagatccataaggatctaagttttg 19199269  T
Q  301 aaagcaagaacaa 313  Q
    ||||||| |||||    
T  19199268 aaagcaaaaacaa 19199256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 202 - 313
Target Start/End: Complemental strand, 19214423 - 19214311
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttg 300  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19214423 taaaaatcacgcaagcaaaacagatccaaaatttccagaattcaaaaccaaagccgtaaccgtaaacacaaaacctagatccataaggatctaagttttg 19214324  T
Q  301 aaagcaagaacaa 313  Q
    ||||||| |||||    
T  19214323 aaagcaaaaacaa 19214311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 185 - 322
Target Start/End: Complemental strand, 3338539 - 3338401
Alignment:
Q  185 atcatagtttaaacctgtaaaaa-tcacgcaagcaaa-cagatcta-aaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatc 281  Q
    ||||||||||||||||||||||| ||||||||||||| || ||| | |||||||||||||||||||| ||  |||||||||||| ||| |||||| ||||    
T  3338539 atcatagtttaaacctgtaaaaaatcacgcaagcaaagcatatcaagaaatttccagaattcaaagaaaa--ccgtaaccgtaagcacgaaacctagatc 3338442  T
Q  282 cataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  3338441 cataaggatctaagttttgaaagcaagaacgagtaccagaa 3338401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 101 - 321
Target Start/End: Complemental strand, 4487316 - 4487105
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacct 200  Q
    ||||||||||||||||||   | ||||||||||| | ||||||| ||||||||||||||||     | ||| ||| ||||||||||||||||||||||||    
T  4487316 caagtgtttccgaagaaacctaacagaatctcca-taaaaaact-caggtaaaactcagaa-----tctctcttcaaaaataatatcatagtttaaacct 4487224  T
Q  201 gtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttg 300  Q
    | |||| |||||  |  |||||||   |||||||||||||| || | | ||| || |||||||||||||||||||| ||||||||||||||||||| |||    
T  4487223 gcaaaa-tcacgtgaataaacagaaaaaaaatttccagaat-cacaaagaaaaccataaccgtaaacacaaaacctagatccataaggatctaagtgttg 4487126  T
Q  301 aaagcaagaacaagtaccaga 321  Q
    |||||||||||||| ||||||    
T  4487125 aaagcaagaacaagcaccaga 4487105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 127 - 314
Target Start/End: Complemental strand, 6054082 - 6053901
Alignment:
Q  127 aatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaata--atatcatagtttaaacctgtaaaaatcacgcaagcaa-acag 223  Q
    |||||||||||||||| ||||||||||||||||||       ||||||  ||||||  |||||| |||| || |||||||||| || |||||||| ||||    
T  6054082 aatctccaatcaaaaatttcaggtaaaactcagaa-------tctttttaaaaatataatatcacagttgaa-cctgtaaaaa-catgcaagcaacacag 6053992  T
Q  224 atctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaag 314  Q
    |||||| ||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| | ||||||    
T  6053991 atctaagatttccagaattcaaaagcgaagccgtaaccgtaaacacaaaacctagatccataaggatctaagtgttgaaagcgaaaacaag 6053901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 196 - 314
Target Start/End: Original strand, 44570279 - 44570397
Alignment:
Q  196 aacctgtaaaaatcacgcaagcaa-acagatctaaa-atttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatcta 293  Q
    |||||||||||| || |||||||| ||||||| ||| |||||||||||||||||  || |||||||||||||||||||||||| ||||||||||||||||    
T  44570279 aacctgtaaaaa-catgcaagcaacacagatccaaagatttccagaattcaaagcgaa-gccgtaaccgtaaacacaaaacctagatccataaggatcta 44570376  T
Q  294 agttttgaaagcaagaacaag 314  Q
    |||||||||| ||||||||||    
T  44570377 agttttgaaaacaagaacaag 44570397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 320
Target Start/End: Complemental strand, 40008648 - 40008524
Alignment:
Q  193 ttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatct 292  Q
    |||||||||||||| |||||| ||||| || ||| ||||||||||||||||||||| ||  || ||||||||||||| |||||| |||||||||||||||    
T  40008648 ttaaacctgtaaaa-tcacgcgagcaagcatatc-aaaatttccagaattcaaagaaaa--ccataaccgtaaacacgaaacctagatccataaggatct 40008553  T
Q  293 aagtttt-gaaagcaagaacaagtaccag 320  Q
    ||||||| |||| |||||||||| |||||    
T  40008552 aagttttggaaaacaagaacaagcaccag 40008524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 31349974 - 31350090
Alignment:
Q  191 gtttaaacctgtaaaaa----tcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataa 286  Q
    |||||||||||||||||    |||||||||||  ||||||||||| |||||||||||||||||||  | |||||||||||||| |||||| |||||||||    
T  31349974 gtttaaacctgtaaaaaagaatcacgcaagcag-cagatctaaaaattccagaattcaaagataagactgtaaccgtaaacacgaaacctagatccataa 31350072  T
Q  287 ggatctaagttttgaaag 304  Q
    ||||||| || |||||||    
T  31350073 ggatctaggtgttgaaag 31350090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 31363774 - 31363890
Alignment:
Q  191 gtttaaacctgtaaaaa----tcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataa 286  Q
    |||||||||||||||||    |||||||||||  ||||||||||| |||||||||||||||||||  | |||||||||||||| |||||| |||||||||    
T  31363774 gtttaaacctgtaaaaaagaatcacgcaagcag-cagatctaaaaattccagaattcaaagataagactgtaaccgtaaacacgaaacctagatccataa 31363872  T
Q  287 ggatctaagttttgaaag 304  Q
    ||||||| || |||||||    
T  31363873 ggatctaggtgttgaaag 31363890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 3987969 - 3988047
Alignment:
Q  243 caaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    ||||||| || || |||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||| ||||||    
T  3987969 caaagatgaaaccataaccgtaaacacaaaacctagatctataaggatccaagttttgaaagcaagaacaagcaccaga 3988047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 4818707 - 4818640
Alignment:
Q  257 taaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||  ||||||||    
T  4818707 taaccgtaaacacaaaacctagatccataaggatccaagttttgaaagcaagaacgagcgccagaaaa 4818640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 30368678 - 30368621
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaa 141  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||    
T  30368678 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacaaaatctccaagcaaaa 30368621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 29035406 - 29035456
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctcca 134  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  29035406 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacaaaatctcca 29035456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 22141952 - 22142001
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctcc 133  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||    
T  22141952 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacaaaatctcc 22142001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 14551471 - 14551521
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctcca 134  Q
    ||||||||||||||||||||| ||||||||||||||||| || ||||||||    
T  14551471 cacagaaaacgaagaatcaagcgtttccgaagaaattcaacaaaatctcca 14551521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 14572295 - 14572345
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctcca 134  Q
    ||||||||||||||||||||| ||||||||||||||||| || ||||||||    
T  14572295 cacagaaaacgaagaatcaagcgtttccgaagaaattcaacaaaatctcca 14572345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 16256017 - 16255967
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctcca 134  Q
    ||||||||||||||||||||| ||||||||||||||||| || ||||||||    
T  16256017 cacagaaaacgaagaatcaagcgtttccgaagaaattcaacaaaatctcca 16255967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 18788158 - 18788108
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctcca 134  Q
    ||||||||||||||||||||| ||||||||||||||||| || ||||||||    
T  18788158 cacagaaaacgaagaatcaagcgtttccgaagaaattcaacaaaatctcca 18788108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 31480744 - 31480641
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||| |||  |||||||||||||||  ||| |  |||||||||||| ||||| |  ||||| |||||||| | |||||    
T  31480744 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaactataaccgtaaacatcaaaatccagatccgtaaggatcaacgtttt 31480647  T
Q  300 gaaagc 305  Q
    ||||||    
T  31480646 gaaagc 31480641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 31495890 - 31495787
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||| |||  |||||||||||||||  ||| |  |||||||||||| ||||| |  ||||| |||||||| | |||||    
T  31495890 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaactataaccgtaaacatcaaaatccagatccgtaaggatcaacgtttt 31495793  T
Q  300 gaaagc 305  Q
    ||||||    
T  31495792 gaaagc 31495787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 44570212 - 44570246
Alignment:
Q  127 aatctccaatcaaaaacttcaggtaaaactcagaa 161  Q
    |||||||||||||||| ||||||||||||||||||    
T  44570212 aatctccaatcaaaaatttcaggtaaaactcagaa 44570246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 185 - 324
Target Start/End: Complemental strand, 5138146 - 5138004
Alignment:
Q  185 atcatagtttaaacctgtaaaaa-tcacgcaagc-aaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatc 281  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| || ||||    
T  5138146 atcatagtttaaacctgtaaaaaatcacgcaagcgaaacagatctaaaaatttccagaattcaaagataagaccgtaaccgtaaacacaaaatctagatc 5138047  T
Q  282 cataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||| ||||||||||||||||| |||||||||    
T  5138046 cataaggatctaagtgttgaaagcaagaacaagcaccagaaaa 5138004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 185 - 324
Target Start/End: Complemental strand, 5151419 - 5151277
Alignment:
Q  185 atcatagtttaaacctgtaaaaa-tcacgcaagc-aaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatc 281  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| || ||||    
T  5151419 atcatagtttaaacctgtaaaaaatcacgcaagcgaaacagatctaaaaatttccagaattcaaagataagaccgtaaccgtaaacacaaaatctagatc 5151320  T
Q  282 cataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||| ||||||||||||||||| |||||||||    
T  5151319 cataaggatctaagtgttgaaagcaagaacaagcaccagaaaa 5151277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 185 - 313
Target Start/End: Original strand, 26696110 - 26696237
Alignment:
Q  185 atcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccat 284  Q
    |||||||||||||| ||||||||||||||||||||  ||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||    
T  26696110 atcatagtttaaacttgtaaaaatcacgcaagcaat-agatccaaaatttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacctagatccat 26696208  T
Q  285 aaggatctaagttttgaaagcaagaacaa 313  Q
    |||||||||||||||||||||||||||||    
T  26696209 aaggatctaagttttgaaagcaagaacaa 26696237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 176 - 313
Target Start/End: Original strand, 4273598 - 4273737
Alignment:
Q  176 gaaaataatatcatagtttaaa-cctgtaaaaa--tcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaa 272  Q
    ||||||| |||||||||||||| ||||||||||  |||||||||||| |||||| ||||||||||||| |||||||  || |||||||||||||||||||    
T  4273598 gaaaatagtatcatagtttaaaacctgtaaaaaaatcacgcaagcaa-cagatccaaaatttccagaactcaaagacgaaaccgtaaccgtaaacacaaa 4273696  T
Q  273 acctggatccataaggatctaagttttgaaagcaagaacaa 313  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  4273697 acctagatccataaggatctaagttttgaaagcaagaacaa 4273737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 204 - 324
Target Start/End: Original strand, 16161171 - 16161291
Alignment:
Q  204 aaaatcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaa 302  Q
    |||||||||| || |||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  16161171 aaaatcacgcgag-aaacagatctaaaaatttccagaattcaaagataagaccgtaaccgtaaacacaaaacctagatccataaggacctaagttttgaa 16161269  T
Q  303 agcaagaacaagtaccagaaaa 324  Q
    |||||||||||| |||||||||    
T  16161270 agcaagaacaagcaccagaaaa 16161291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 185 - 322
Target Start/End: Original strand, 26522101 - 26522237
Alignment:
Q  185 atcatagtttaaacctgtaaa-aatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcca 283  Q
    |||||||||||| |||||||| ||||||| |||||| || ||| ||||||||||||||||||||| ||  |||||||||||||||| |||||| ||||||    
T  26522101 atcatagtttaagcctgtaaacaatcacgtaagcaagcatatcaaaaatttccagaattcaaagaaaa--ccgtaaccgtaaacacgaaacctagatcca 26522198  T
Q  284 taaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  26522199 taaggatctaagttttgaaagcaagaacgagtactagaa 26522237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 313
Target Start/End: Complemental strand, 4136217 - 4136105
Alignment:
Q  202 taaaaatcacgcaagcaaac-agatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttg 300  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  4136217 taaaaatcacgcaagcaaaatagatccaaaatttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacctagatccataagaatctaagttttg 4136118  T
Q  301 aaagcaagaacaa 313  Q
    ||||||| |||||    
T  4136117 aaagcaaaaacaa 4136105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 202 - 313
Target Start/End: Complemental strand, 4151143 - 4151031
Alignment:
Q  202 taaaaatcacgcaagcaaac-agatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttg 300  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  4151143 taaaaatcacgcaagcaaaatagatccaaaatttccagaattcaaagccaaaaccgtaaccgtaaacacaaaacctagatccataagaatctaagttttg 4151044  T
Q  301 aaagcaagaacaa 313  Q
    ||||||| |||||    
T  4151043 aaagcaaaaacaa 4151031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 26265726 - 26265631
Alignment:
Q  218 aaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaa 313  Q
    ||||||||| |||||||||||||||||||   ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26265726 aaacagatccaaaatttccagaattcaaaaccaaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaagcaagaacaa 26265631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 26325758 - 26325663
Alignment:
Q  218 aaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaa 313  Q
    ||||||||| |||||||||||||||||||   ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26325758 aaacagatccaaaatttccagaattcaaaaccaaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaagcaagaacaa 26325663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 207 - 313
Target Start/End: Complemental strand, 32999350 - 32999245
Alignment:
Q  207 atcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagca 306  Q
    |||||||||||||  ||||| ||||||||||||| |||||||  || ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32999350 atcacgcaagcaat-agatccaaaatttccagaactcaaagacgaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaagca 32999252  T
Q  307 agaacaa 313  Q
    |||||||    
T  32999251 agaacaa 32999245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 26660775 - 26660683
Alignment:
Q  228 aaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||    
T  26660775 aaaatttccagaattcaaaga--aagccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaagcaagaacgagtactagaa 26660683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 26675968 - 26675876
Alignment:
Q  228 aaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||    
T  26675968 aaaatttccagaattcaaaga--aagccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaagcaagaacgagtactagaa 26675876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 26686105 - 26686013
Alignment:
Q  228 aaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||    
T  26686105 aaaatttccagaattcaaaga--aagccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaagcaagaacgagtactagaa 26686013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 26689646 - 26689554
Alignment:
Q  228 aaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||    
T  26689646 aaaatttccagaattcaaaga--aagccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaagcaagaacgagtactagaa 26689554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 127 - 324
Target Start/End: Original strand, 17241669 - 17241862
Alignment:
Q  127 aatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataa-tatcatagtttaaacctgtaaaaatcacgcaagcaaacagat 225  Q
    |||||||||||||||||||||||||||||||||||     | | ||||| ||| ||| |||||  ||| ||||||||||||||||||| ||||| || ||    
T  17241669 aatctccaatcaaaaacttcaggtaaaactcagaatc---tcttttttcaaaagtaaatatcacggtt-aaacctgtaaaaatcacgcgagcaagcatat 17241764  T
Q  226 ctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    | ||||| ||||||||||||||  ||| |  |||||||||||| |||||||| ||||| | |||||| ||||||||||||||||||| ||||||||||||    
T  17241765 caaaaatctccagaattcaaag--aaaactataaccgtaaacaccaaaacctagatccgtgaggatcaaagttttgaaagcaagaaccagtaccagaaaa 17241862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 176 - 314
Target Start/End: Complemental strand, 11027953 - 11027811
Alignment:
Q  176 gaaaataatatcatagtttaaa-cctgt---aaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-ca 270  Q
    ||||||| |||||||||||||| |||||   ||||||||||||||||| |||||| ||||||||||||| ||||||| ||| | ||||||||||||| ||    
T  11027953 gaaaatagtatcatagtttaaaacctgtcaaaaaaatcacgcaagcaa-cagatccaaaatttccagaactcaaagacaaaactgtaaccgtaaacatca 11027855  T
Q  271 aaacctggatccataaggatctaagttttgaaagcaagaacaag 314  Q
    |||||| ||||| |||||||| | ||||||||||||||||||||    
T  11027854 aaacctagatccgtaaggatcaacgttttgaaagcaagaacaag 11027811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 217 - 321
Target Start/End: Complemental strand, 23832522 - 23832416
Alignment:
Q  217 caaacagatctaaaatttccagaatt-caaagataaagccgtaaccgtaaacac-aaaacctggatccataaggatctaagttttgaaagcaagaacaag 314  Q
    |||||||||||||||||||||||||  ||||||||||  | ||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||    
T  23832522 caaacagatctaaaatttccagaatcacaaagataaaatcataaccgtaaacaccaaaacctagatccataaggatccaagttttgaaagcaagaacaag 23832423  T
Q  315 taccaga 321  Q
     ||||||    
T  23832422 caccaga 23832416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 217 - 321
Target Start/End: Complemental strand, 39351757 - 39351651
Alignment:
Q  217 caaacagatctaaaatttccagaatt-caaagataaagccgtaaccgtaaacac-aaaacctggatccataaggatctaagttttgaaagcaagaacaag 314  Q
    |||||||||||||| ||||||||||  ||||||||||| | ||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||    
T  39351757 caaacagatctaaattttccagaatcacaaagataaagtcataaccgtaaacaccaaaacctagatccataaggatccaagttttgaaagcaagaacaag 39351658  T
Q  315 taccaga 321  Q
     ||||||    
T  39351657 caccaga 39351651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 31119103 - 31119195
Alignment:
Q  228 aaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    ||||||||||||||||||||| ||  |||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||| ||||| ||||    
T  31119103 aaaatttccagaattcaaagaaaa--ccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaggcaagaacgagtactagaa 31119195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 31133278 - 31133370
Alignment:
Q  228 aaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    ||||||||||||||||||||| ||  |||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||| ||||| ||||    
T  31133278 aaaatttccagaattcaaagaaaa--ccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaggcaagaacgagtactagaa 31133370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 39149425 - 39149475
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctcca 134  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  39149425 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacaaaatctcca 39149475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 6224346 - 6224299
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatct 131  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||    
T  6224346 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacaaaatct 6224299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 314
Target Start/End: Complemental strand, 26498980 - 26498868
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||| |||  |||||||||||||||| ||  |  |||||||||||| ||||| || ||||| |||||||| | |||||    
T  26498980 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaagaaaa--ctataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 26498883  T
Q  300 gaaagcaagaacaag 314  Q
    |||||| ||||||||    
T  26498882 gaaagcgagaacaag 26498868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 314
Target Start/End: Original strand, 26599049 - 26599161
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||| |||  |||||||||||||||| ||  |  |||||||||||| ||||| || ||||| |||||||| | |||||    
T  26599049 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaagaaaa--ctataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 26599146  T
Q  300 gaaagcaagaacaag 314  Q
    |||||| ||||||||    
T  26599147 gaaagcgagaacaag 26599161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 18136039 - 18136089
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctcca 134  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||    
T  18136039 cacagaaagcgaagaatcaagtgtttccgaagaaattcaacaaaatctcca 18136089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 45381495 - 45381609
Alignment:
Q  96 agaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagttta 195  Q
    |||||||||| || ||| ||||| ||| ||||||||||| ||| |||| ||||||||||||||||||      || |||  ||||||| ||||||||| |    
T  45381495 agaatcaagt-ttcccggagaaactcaacagaatctcca-tcacaaacatcaggtaaaactcagaacc-----tcattttcaaaataaaatcatagtt-a 45381586  T
Q  196 aacctgtaaaaatcacgcaagca 218  Q
    |||||||||||||||||||||||    
T  45381587 aacctgtaaaaatcacgcaagca 45381609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 45396350 - 45396464
Alignment:
Q  96 agaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagttta 195  Q
    |||||||||| || ||| ||||| ||| ||||||||||| ||| |||| ||||||||||||||||||      || |||  ||||||| ||||||||| |    
T  45396350 agaatcaagt-ttcccggagaaactcaacagaatctcca-tcacaaacatcaggtaaaactcagaacc-----tcattttcaaaataaaatcatagtt-a 45396441  T
Q  196 aacctgtaaaaatcacgcaagca 218  Q
    |||||||||||||||||||||||    
T  45396442 aacctgtaaaaatcacgcaagca 45396464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 10834046 - 10833970
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaac 162  Q
    |||||||| || |||||||||| || ||| ||||| ||| ||||||||||| ||| |||| ||||||||||||||||||    
T  10834046 cacagaaagcgcagaatcaagt-ttcccggagaaactcaacagaatctcca-tcacaaacatcaggtaaaactcagaac 10833970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 11435708 - 11435784
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaac 162  Q
    |||||||| || |||||||||| || ||| ||||| ||| ||||||||||| ||| |||| ||||||||||||||||||    
T  11435708 cacagaaagcgcagaatcaagt-ttcccggagaaactcaacagaatctcca-tcacaaacatcaggtaaaactcagaac 11435784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 11449967 - 11450043
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaac 162  Q
    |||||||| || |||||||||| || ||| ||||| ||| ||||||||||| ||| |||| ||||||||||||||||||    
T  11449967 cacagaaagcgcagaatcaagt-ttcccggagaaactcaacagaatctcca-tcacaaacatcaggtaaaactcagaac 11450043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 130 - 314
Target Start/End: Original strand, 23635 - 23821
Alignment:
Q  130 ctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaa 229  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||| ||| ||| |||||||||  | |||||||||||||    
T  23635 ctccaatcaaaaatttcaggtaaaactcagaacagaatttcttttcaaaagtaatatcatagttt-aacatgt-aaaatcacgtgaacaaacagatctaa 23732  T
Q  230 --aatttccagaat-tcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagttttgaaagcaagaacaag 314  Q
      | ||||||||||  ||||||||||  | |||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  23733 agattttccagaatcacaaagataaaatcataaccgtaaacaccaaaacctagatccataaggatccaagttttgaaagcaagaacaag 23821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1629 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold1629
Description:

Target: scaffold1629; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 177 - 324
Target Start/End: Complemental strand, 1071 - 924
Alignment:
Q  177 aaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacc 275  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||| |  |||||||||||| ||||||     
T  1071 aaaataagatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctgaaatttccagaattcaaa-aaaaaactataaccgtaaacaccaaaact 973  T
Q  276 tggatccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    | ||||| |||||||| |||||||||||||| |||||||||| ||||||    
T  972 tagatccgtaaggatcaaagttttgaaagcaggaacaagtactagaaaa 924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 96 - 321
Target Start/End: Complemental strand, 517 - 299
Alignment:
Q  96 agaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagttta 195  Q
    |||||||||| |||||||||||  |||| | |||||||||||||||||||||||||||||||||||     | ||||||| ||| ||||||||  ||| |    
T  517 agaatcaagt-tttccgaagaatctcacaa-aatctccaatcaaaaacttcaggtaaaactcagaa-----tctcttttcaaaagtaatatcacggtt-a 426  T
Q  196 aacctgtaaaaa-tcacgcaagcaaacagatctaaaa-tttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatcta 293  Q
    |||||||||||| |||||| ||||| || |||||||| ||||||||||||||||| ||  || ||||||||||||| |||||| ||||||||||||||||    
T  425 aacctgtaaaaaatcacgcgagcaagcatatctaaaaatttccagaattcaaagaaaa--ccataaccgtaaacacgaaacctagatccataaggatcta 328  T
Q  294 agtttt-gaaagcaagaacaagtaccaga 321  Q
    |||||| |||| |||||||||| ||||||    
T  327 agttttggaaaacaagaacaagcaccaga 299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 185 - 324
Target Start/End: Complemental strand, 28739 - 28599
Alignment:
Q  185 atcatagtttaaacctgtaaa-aatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatcc 282  Q
    ||||||||||||||| ||||| ||||||||||||||| || ||||| | |||||||||| || | | |||||| |||||||||||||||||||| |||||    
T  28739 atcatagtttaaaccggtaaacaatcacgcaagcaaagcatatctagattttccagaat-cacaaagaaagccataaccgtaaacacaaaacctagatcc 28641  T
Q  283 ataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  28640 ataaggatctaagttttgaaagcaagaacaagtaccagaaaa 28599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 185 - 324
Target Start/End: Original strand, 15381 - 15522
Alignment:
Q  185 atcatagtttaaacctgtaaa-aatcacgcaagcaaa--cagatcta-aaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggat 280  Q
    |||||||||| |||| ||||| |||||||||||||||  || ||| | ||||||||||||||||||||  ||| | |||||||||||||||||||| |||    
T  15381 atcatagtttgaaccggtaaacaatcacgcaagcaaaagcatatcaagaaatttccagaattcaaaga--aagtcataaccgtaaacacaaaacctagat 15478  T
Q  281 ccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15479 ccataaggatctaagttttgaaagcaagaacaagtaccagaaaa 15522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 207 - 313
Target Start/End: Complemental strand, 13415 - 13310
Alignment:
Q  207 atcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagca 306  Q
    |||||||||||||  ||||| ||||||||||||| |||||||  || ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13415 atcacgcaagcaat-agatccaaaatttccagaactcaaagacgaaaccgtaaccgtaaacacaaaacctagatccataaggatctaagttttgaaagca 13317  T
Q  307 agaacaa 313  Q
    |||||||    
T  13316 agaacaa 13310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1179 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold1179
Description:

Target: scaffold1179; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 185 - 322
Target Start/End: Complemental strand, 1588 - 1449
Alignment:
Q  185 atcatagtttaaacctgtaaa-aatcacgcaagcaaa-cagatcta-aaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggat 280  Q
    ||||||||||||||||||||| ||||||||||||||| || ||| | |||||||||||||||||||| ||  ||||||||||||||| |||||||| |||    
T  1588 atcatagtttaaacctgtaaacaatcacgcaagcaaagcatatcaagaaatttccagaattcaaagaaaa--ccgtaaccgtaaacatcaaaacctagat 1491  T
Q  281 ccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    || |||||||| ||| ||||||||||||||| ||||||||||    
T  1490 ccgtaaggatcaaagctttgaaagcaagaacgagtaccagaa 1449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 196 - 324
Target Start/End: Complemental strand, 464 - 336
Alignment:
Q  196 aacctgtaaaaatcacgcaagcaa-acagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaa 294  Q
    |||||||||||| || |||||||| |||||||||| ||||||||||||||||    ||||||||||||||| |||||||||| |||||||||||||||||    
T  464 aacctgtaaaaa-catgcaagcaacacagatctaagatttccagaattcaaaagcgaagccgtaaccgtaagcacaaaacctagatccataaggatctaa 366  T
Q  295 gttttgaaagcaagaacaagtaccagaaaa 324  Q
     ||||||||||||| || | ||||||||||    
T  365 attttgaaagcaaggacgaataccagaaaa 336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 533 - 499
Alignment:
Q  127 aatctccaatcaaaaacttcaggtaaaactcagaa 161  Q
    |||||||||||||||| ||||||||||||||||||    
T  533 aatctccaatcaaaaatttcaggtaaaactcagaa 499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 16805 - 16713
Alignment:
Q  228 aaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccagaa 322  Q
    ||||||||||||||||||||| ||  |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||    
T  16805 aaaatttccagaattcaaagaaaa--ccgtaaccgtaaacacgaaacctagatccataaggatctaagttttgaaagcaagaacgagtactagaa 16713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0252 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 1777 - 1604
Alignment:
Q  139 aaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccag 238  Q
    |||||||||||||||||||||||     ||||||||| |||| ||||||||||||||| |||| |||| |||||  |  |||||||   |||||||||||    
T  1777 aaaacttcaggtaaaactcagaa-----tttcttttcaaaaacaatatcatagtttaa-cctgcaaaa-tcacgtgaataaacagaaa-aaaatttccag 1686  T
Q  239 aattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    ||| || | | ||| || |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  1685 aat-cacaaagaaaaccataaccgtaaacacaaaacctagatccataaggatccaagttttgaaagcaagaacaagcaccaga 1604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 321
Target Start/End: Complemental strand, 56248 - 56092
Alignment:
Q  162 cagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgcaagcaaacagatctaaaatttccagaatt-caaagataaagccgtaac 260  Q
    |||| ||||| ||| ||||||||||||||||||||||||| |||| |||||  |  ||||| |   ||| ||||||||||  ||||||| || || ||||    
T  56248 cagagtttctcttcaaaaataatatcatagtttaaacctgcaaaa-tcacgtgaataaacaaa---aaattttccagaatcacaaagatgaaaccataac 56153  T
Q  261 cgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  56152 cgtaaacacaaaacctagatccataaggatccaagttttgaaagcaagaacaagcaccaga 56092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1760 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1760
Description:

Target: scaffold1760; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 206 - 304
Target Start/End: Original strand, 962 - 1059
Alignment:
Q  206 aatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaag 304  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||  | |||||||||||||| |||||| |||||||||||||||| || |||||||    
T  962 aatcacgcaagcag-cagatctaaaaattccagaattcaaagataagactgtaaccgtaaacacgaaacctagatccataaggatctaggtgttgaaag 1059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 25247 - 25169
Alignment:
Q  243 caaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    ||||||| || || |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  25247 caaagatgaaaccataaccgtaaacacaaaacctagatccataaggatccaagttttgaaagcaagaacaagcaccaga 25169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 47597 - 47675
Alignment:
Q  243 caaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    ||||||| || || |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  47597 caaagatgaaaccataaccgtaaacacaaaacctagatccataaggatccaagttttgaaagcaagaacaagcaccaga 47675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1803 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1803
Description:

Target: scaffold1803; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 203 - 322
Target Start/End: Original strand, 875 - 993
Alignment:
Q  203 aaaaatcacgcaagcaaacagatctaaaattt-ccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagttttg 300  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||||| ||  |  |||||||||||| |||||||| ||||| |||||||| ||| ||||    
T  875 aaaaatcacgcaagcaa-cagatctagaattttccagaattcaaagaaaa--ctataaccgtaaacatcaaaacctagatccgtaaggatcaaagctttg 971  T
Q  301 aaagcaagaacaagtaccagaa 322  Q
    ||||||||||| ||||||||||    
T  972 aaagcaagaacgagtaccagaa 993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1536 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1536
Description:

Target: scaffold1536; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 305
Target Start/End: Original strand, 476 - 670
Alignment:
Q  101 caagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacct 200  Q
    ||||||||||||||||||   | ||||||||||| | ||||||| ||||||||||||||||     | ||| ||| ||||||||||||||||||||||||    
T  476 caagtgtttccgaagaaacctaacagaatctcca-taaaaaact-caggtaaaactcagaa-----tctctcttcaaaaataatatcatagtttaaacct 568  T
Q  201 gtaaaaatcacgcaagcaaacagatctaaaatttccagaattcaaagataaagccgtaaccgtaaacacaaaacctggatccataaggatctaagttttg 300  Q
    | |||| |||||  |  ||||| |   ||| |||||||||| || | | ||| || || ||||||||||||||||| ||||||||||||||||||| |||    
T  569 gcaaaa-tcacgtgaataaacacaaa-aaagtttccagaat-cacaaagaaaaccatagccgtaaacacaaaacctagatccataaggatctaagtgttg 665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 219
Target Start/End: Complemental strand, 9435 - 9319
Alignment:
Q  96 agaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagttta 195  Q
    |||||||||| || ||| ||||| ||| |||||||||||   |||||||||||||||||||||||||      ||||||| ||||||| |||||||||||    
T  9435 agaatcaagt-ttcccggagaaactcaacagaatctccatcaaaaaacttcaggtaaaactcagaacc-----tcttttcaaaaataaaatcatagttta 9342  T
Q  196 aacctgtaaaaatcacgcaagcaa 219  Q
    ||||||  ||||||||||||||||    
T  9341 aacctg-caaaatcacgcaagcaa 9319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 23878 - 23928
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctcca 134  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  23878 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacaaaatctcca 23928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 226129 - 226079
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctcca 134  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  226129 cacagaaaacgaagaatcaagtgtttccgaagaaattcaacaaaatctcca 226079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 218
Target Start/End: Original strand, 91809 - 91905
Alignment:
Q  114 agaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaacagaatttcttttcgaaaataatatcatagtttaaacctgtaaaaatcacgc 213  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||||||||      ||||||| ||||||| |||||||||||||||||  ||||||||||    
T  91809 agaaactcaacagaatctcca-tcaaaaacttcaggtaaaactcagaac-----ctcttttc-aaaataaaatcatagtttaaacctg-caaaatcacgc 91900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 6368 - 6304
Alignment:
Q  257 taaccgtaaacacaaaacctggatccataaggatctaagttttgaaagcaagaacaagtaccaga 321  Q
    ||||||||| |||||||||| |||||||||||||| ||| |||| ||||||||||||| ||||||    
T  6368 taaccgtaagcacaaaacctagatccataaggatccaagctttgtaagcaagaacaagcaccaga 6304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 130545 - 130442
Alignment:
Q  202 taaaaatcacgcaagcaaa-cagatctaaaatttccagaattcaaagataaagccgtaaccgtaaaca-caaaacctggatccataaggatctaagtttt 299  Q
    ||||||||||||||||||| |||||| |||  |||||||||||||||  ||| || |||||||||||| ||||| || ||||| |||||||| | |||||    
T  130545 taaaaatcacgcaagcaaaacagatccaaaggttccagaattcaaag--aaaaccataaccgtaaacatcaaaatctagatccgtaaggatcaacgtttt 130448  T
Q  300 gaaagc 305  Q
    ||||||    
T  130447 gaaagc 130442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 13119 - 13195
Alignment:
Q  84 cacagaaaacgaagaatcaagtgtttccgaagaaattcaccagaatctccaatcaaaaacttcaggtaaaactcagaac 162  Q
    |||||||| || |||||||||| || ||| ||||| ||| ||||||||||| ||| |||| ||||||||||||||||||    
T  13119 cacagaaagcgcagaatcaagt-ttcccggagaaactcaacagaatctcca-tcacaaacatcaggtaaaactcagaac 13195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University