View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1305_low_99 (Length: 312)

Name: NF1305_low_99
Description: NF1305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1305_low_99
NF1305_low_99
[»] scaffold0561 (1 HSPs)
scaffold0561 (73-312)||(6613-6853)
[»] scaffold0266 (1 HSPs)
scaffold0266 (80-311)||(7470-7702)
[»] scaffold0225 (1 HSPs)
scaffold0225 (80-307)||(25859-26087)
[»] chr7 (15 HSPs)
chr7 (73-312)||(4442344-4442583)
chr7 (80-307)||(7826323-7826551)
chr7 (80-307)||(27105393-27105621)
chr7 (80-307)||(27172704-27172932)
chr7 (79-311)||(13458457-13458690)
chr7 (73-312)||(13379299-13379522)
chr7 (73-181)||(17926058-17926166)
chr7 (209-311)||(17926171-17926274)
chr7 (155-312)||(22034563-22034721)
chr7 (80-165)||(8710028-8710113)
chr7 (80-165)||(14334819-14334904)
chr7 (80-165)||(10873113-10873198)
chr7 (80-165)||(13688464-13688549)
chr7 (80-165)||(15158819-15158904)
chr7 (80-165)||(18587933-18588018)
[»] chr6 (13 HSPs)
chr6 (80-307)||(16380128-16380356)
chr6 (80-307)||(16647724-16647952)
chr6 (73-295)||(23025513-23025736)
chr6 (80-307)||(1646569-1646797)
chr6 (73-302)||(14130760-14130991)
chr6 (73-312)||(16100306-16100546)
chr6 (80-170)||(23998546-23998636)
chr6 (202-283)||(18401066-18401147)
chr6 (83-170)||(21567884-21567971)
chr6 (80-165)||(18796988-18797073)
chr6 (80-135)||(16574188-16574243)
chr6 (80-135)||(16621137-16621192)
chr6 (80-165)||(24293680-24293765)
[»] chr5 (14 HSPs)
chr5 (80-307)||(21934980-21935208)
chr5 (80-307)||(23508032-23508260)
chr5 (80-307)||(24583558-24583786)
chr5 (80-165)||(19772326-19772411)
chr5 (80-165)||(41773208-41773293)
chr5 (80-165)||(14997674-14997759)
chr5 (80-165)||(16358868-16358953)
chr5 (80-165)||(27612720-27612805)
chr5 (80-165)||(27666425-27666510)
chr5 (80-165)||(27683335-27683420)
chr5 (80-165)||(29474008-29474093)
chr5 (80-165)||(34568860-34568945)
chr5 (80-165)||(40711146-40711231)
chr5 (80-168)||(17267266-17267354)
[»] chr3 (20 HSPs)
chr3 (80-307)||(30139869-30140097)
chr3 (80-307)||(30149420-30149648)
chr3 (80-307)||(13965201-13965429)
chr3 (80-312)||(15948314-15948547)
chr3 (73-312)||(17200690-17200931)
chr3 (80-307)||(15612166-15612394)
chr3 (73-307)||(6150702-6150937)
chr3 (80-283)||(8272272-8272476)
chr3 (80-312)||(3296218-3296451)
chr3 (80-165)||(20060046-20060131)
chr3 (80-135)||(5108633-5108688)
chr3 (80-135)||(13254743-13254798)
chr3 (78-120)||(25768379-25768421)
chr3 (80-165)||(10908263-10908348)
chr3 (80-165)||(12888762-12888847)
chr3 (80-165)||(15346237-15346322)
chr3 (80-165)||(15587384-15587469)
chr3 (80-165)||(15714048-15714133)
chr3 (80-165)||(16637826-16637911)
chr3 (80-165)||(43164728-43164813)
[»] chr1 (11 HSPs)
chr1 (80-307)||(20829074-20829302)
chr1 (95-312)||(22133429-22133647)
chr1 (73-312)||(41215533-41215773)
chr1 (73-307)||(20927496-20927731)
chr1 (73-307)||(20527495-20527730)
chr1 (80-312)||(21200631-21200864)
chr1 (155-280)||(10400839-10400967)
chr1 (80-165)||(21832751-21832836)
chr1 (80-165)||(21233556-21233641)
chr1 (80-165)||(33388854-33388939)
chr1 (80-165)||(51331317-51331402)
[»] scaffold0124 (1 HSPs)
scaffold0124 (80-307)||(5419-5648)
[»] scaffold0465 (1 HSPs)
scaffold0465 (80-307)||(13238-13466)
[»] scaffold0141 (1 HSPs)
scaffold0141 (80-307)||(23426-23654)
[»] chr4 (7 HSPs)
chr4 (84-307)||(15290768-15290992)
chr4 (104-312)||(12340472-12340680)
chr4 (80-165)||(23958181-23958266)
chr4 (80-165)||(27713770-27713855)
chr4 (80-165)||(8051116-8051201)
chr4 (80-165)||(16251343-16251428)
chr4 (80-165)||(19776286-19776371)
[»] scaffold0878 (1 HSPs)
scaffold0878 (80-307)||(4459-4687)
[»] scaffold0467 (1 HSPs)
scaffold0467 (80-311)||(1230-1462)
[»] chr8 (13 HSPs)
chr8 (73-312)||(22436796-22437036)
chr8 (100-307)||(24931877-24932085)
chr8 (73-258)||(21194643-21194828)
chr8 (73-312)||(23902657-23902895)
chr8 (80-304)||(21848393-21848618)
chr8 (98-311)||(20650404-20650618)
chr8 (73-312)||(23155090-23155330)
chr8 (73-283)||(16414584-16414795)
chr8 (80-165)||(16875291-16875376)
chr8 (197-312)||(25283558-25283674)
chr8 (80-165)||(17672219-17672304)
chr8 (80-165)||(20016459-20016544)
chr8 (115-224)||(24630803-24630912)
[»] scaffold1488 (1 HSPs)
scaffold1488 (78-312)||(413-648)
[»] scaffold0022 (1 HSPs)
scaffold0022 (80-306)||(8440-8667)
[»] chr2 (13 HSPs)
chr2 (73-312)||(25130667-25130907)
chr2 (80-259)||(24829387-24829566)
chr2 (98-309)||(22759719-22759931)
chr2 (78-312)||(24567813-24568048)
chr2 (80-306)||(22280170-22280397)
chr2 (73-296)||(27541544-27541768)
chr2 (80-165)||(24264435-24264520)
chr2 (80-165)||(24712099-24712184)
chr2 (80-165)||(9337647-9337732)
chr2 (80-165)||(9486281-9486366)
chr2 (80-165)||(10870915-10871000)
chr2 (80-165)||(27220081-27220166)
chr2 (80-165)||(44383863-44383948)
[»] scaffold0170 (1 HSPs)
scaffold0170 (73-311)||(34543-34780)
[»] scaffold0021 (4 HSPs)
scaffold0021 (73-312)||(7613-7853)
scaffold0021 (99-312)||(21462-21677)
scaffold0021 (99-312)||(31038-31253)
scaffold0021 (73-249)||(89958-90134)
[»] scaffold0008 (2 HSPs)
scaffold0008 (89-281)||(132128-132321)
scaffold0008 (98-307)||(26252-26468)
[»] scaffold0162 (2 HSPs)
scaffold0162 (80-307)||(10787-11015)
scaffold0162 (80-259)||(15373-15552)
[»] scaffold0302 (2 HSPs)
scaffold0302 (80-282)||(676-879)
scaffold0302 (80-161)||(7618-7699)
[»] scaffold0120 (1 HSPs)
scaffold0120 (73-312)||(24634-24874)
[»] scaffold0673 (1 HSPs)
scaffold0673 (73-307)||(5917-6152)
[»] scaffold0092 (1 HSPs)
scaffold0092 (78-312)||(555-790)
[»] scaffold0610 (1 HSPs)
scaffold0610 (98-312)||(4510-4725)
[»] scaffold0066 (1 HSPs)
scaffold0066 (128-312)||(51352-51537)
[»] scaffold0456 (2 HSPs)
scaffold0456 (116-307)||(7192-7384)
scaffold0456 (116-307)||(47-239)
[»] scaffold0218 (2 HSPs)
scaffold0218 (80-312)||(1560-1793)
scaffold0218 (98-142)||(26810-26854)
[»] scaffold0335 (1 HSPs)
scaffold0335 (73-232)||(6929-7088)
[»] scaffold0139 (1 HSPs)
scaffold0139 (149-307)||(17960-18119)
[»] scaffold0876 (1 HSPs)
scaffold0876 (73-168)||(699-794)
[»] scaffold0058 (1 HSPs)
scaffold0058 (73-259)||(76881-77067)
[»] scaffold0476 (1 HSPs)
scaffold0476 (80-165)||(1301-1386)
[»] scaffold0462 (1 HSPs)
scaffold0462 (220-312)||(2325-2418)
[»] scaffold0114 (2 HSPs)
scaffold0114 (73-165)||(39514-39606)
scaffold0114 (80-165)||(22339-22424)
[»] scaffold0215 (1 HSPs)
scaffold0215 (80-165)||(28251-28336)
[»] scaffold0080 (2 HSPs)
scaffold0080 (80-165)||(31347-31432)
scaffold0080 (80-165)||(36813-36898)
[»] scaffold0055 (1 HSPs)
scaffold0055 (80-165)||(21710-21795)
[»] scaffold0420 (1 HSPs)
scaffold0420 (73-165)||(8070-8162)
[»] scaffold0348 (2 HSPs)
scaffold0348 (80-159)||(18245-18324)
scaffold0348 (80-165)||(5605-5690)
[»] scaffold0044 (1 HSPs)
scaffold0044 (80-165)||(2887-2972)


Alignment Details
Target: scaffold0561 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 6853 - 6613
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||||| || || ||||||||| ||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||| |    
T  6853 ccacggagaaacactcggcctgataaactgcttcacaagcaactcttctaactacttcttcaattcacccaactctgttgcagacatccgatacggcgca 6754  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgt-ctggaaaacttttggaaact 271  Q
     || ||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||| | ||||||||| ||||||||    
T  6753 atcgaaataggactcgttcctggtaccaaatcaattgcaaactcaacttccctctccgacggtaattcggtaatgtcgtccgggaaaacttctggaaact 6654  T
Q  272 cctgcactaccgataaatcaccaacccctttctcactactt 312  Q
    | ||||||||||  |||||||||| ||||||||||||||||    
T  6653 cttgcactaccggcaaatcaccaatccctttctcactactt 6613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 80 - 311
Target Start/End: Complemental strand, 7702 - 7470
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    |||||||| || ||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | || |||    
T  7702 gaaacacttggcctaataaactgcttctcaagcaactcttccaactgtttcttcaattcacccaactctgatgcagacatccgatacggcgcaatcgaaa 7603  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || || |||||||  |||||||| |||||    
T  7602 taggactcgttcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcatccggaaaaacttaaggaaactcttgcac 7503  T
Q  279 taccgataaatcaccaacccctttctcactact 311  Q
    |||||  || |||||||| ||||||||||||||    
T  7502 taccggcaattcaccaactcctttctcactact 7470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 80 - 307
Target Start/End: Original strand, 25859 - 26087
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| | || |||    
T  25859 gaaacactcggtctaataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactccgatgcagacatccgatacggcgcaatcgaaa 25958  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||| |||||    
T  25959 taggactcgtgcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcac 26058  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    |||||  ||||||| ||||||||||||||    
T  26059 taccggcaaatcactaacccctttctcac 26087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 145; Significance: 3e-76; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 4442344 - 4442583
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||||| || || ||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  4442344 ccacggagaaacactcggcctgataaactgcttctcaagcaactcttctaactgct-cttcaattcacccaactctgatgcagacatccaatacggcgca 4442442  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaact 271  Q
     || ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| || || || ||||||| ||||||||    
T  4442443 atcgaaatatgactcgttcctggtacgaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatgtcatccggtaaaacttctggaaact 4442542  T
Q  272 cctgcactaccgataaatcaccaacccctttctcactactt 312  Q
    | ||||||||| | |||||||||||||||||||||||||||    
T  4442543 cttgcactaccaacaaatcaccaacccctttctcactactt 4442583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 80 - 307
Target Start/End: Original strand, 7826323 - 7826551
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| | || |||    
T  7826323 gaaacactcggtctaataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactccgatgcagacatccgatacggcgcaatcgaaa 7826422  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||| |||||    
T  7826423 taggactcgtgcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcac 7826522  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    |||||  ||||||| ||||||||||||||    
T  7826523 taccggcaaatcactaacccctttctcac 7826551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 80 - 307
Target Start/End: Complemental strand, 27105621 - 27105393
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| | || |||    
T  27105621 gaaacactcggtctaataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactccgatgcagacatccgatacggcgcaatcgaaa 27105522  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||| |||||    
T  27105521 taggactcgtgcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcac 27105422  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    |||||  ||||||| ||||||||||||||    
T  27105421 taccggcaaatcactaacccctttctcac 27105393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 80 - 307
Target Start/End: Original strand, 27172704 - 27172932
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| | || |||    
T  27172704 gaaacactcggtctaataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactccgatgcagacatccgatacggcgcaatcgaaa 27172803  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||| |||||    
T  27172804 taggactcgtgcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcac 27172903  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    |||||  ||||||| ||||||||||||||    
T  27172904 taccggcaaatcactaacccctttctcac 27172932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 79 - 311
Target Start/End: Original strand, 13458457 - 13458690
Alignment:
Q  79 agaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaa 178  Q
    |||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||||||||||| |||||  ||| ||||||| ||||||||| | || ||    
T  13458457 agaaacactcagtctaatgaactgcttctcaagtaactcttccaagtgcttcttcaattcacctaactcatatgaagacatctgatacggcgcaatcgaa 13458556  T
Q  179 ataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctg-gaaaacttttggaaactcctgca 277  Q
    ||||||||||||||| | ||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| |  ||||||| |||||| || ||||    
T  13458557 ataggactcgttcctggcaccaaatcaattgcacactcaacttccctctccggcggtaattcggtaatgtcgtccgaaaaaacttctggaaattcttgca 13458656  T
Q  278 ctaccgataaatcaccaacccctttctcactact 311  Q
    ||||||  ||||||||||  ||||||||||||||    
T  13458657 ctaccggcaaatcaccaattcctttctcactact 13458690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 13379299 - 13379522
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||||| || || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  13379299 ccacggagaaacactcggcctgataaactgcttctcaagcaactcttccaactgcttcttcaattcacccaactctgatgcagacatctgatacggcgca 13379398  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaact 271  Q
     || |||||||||||||| || |||||                 |||||||||||||||||||||||||||||| | ||| || ||||||  || |||||    
T  13379399 atcgaaataggactcgtttctggtacc-----------------aacttccctctccggcggtaattcggtaatgttgtccggaaaaactactgaaaact 13379481  T
Q  272 cctgcactaccgataaatcaccaacccctttctcactactt 312  Q
    | ||||||||||  ||||||||||| |||||||||||||||    
T  13379482 cttgcactaccggcaaatcaccaactcctttctcactactt 13379522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 17926058 - 17926166
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||||| || || ||||| ||||||| ||||||||  |||||||||||||||| || ||||||||||||||||||||||||||||| |    
T  17926058 ccacggagaaacactcggcctgataaactgtttctcaaacaactcttctaactgcttcttcaattaactcaactctgatgcagacatccgatacggcgca 17926157  T
Q  173 gtcaaaata 181  Q
     ||||||||    
T  17926158 atcaaaata 17926166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 209 - 311
Target Start/End: Original strand, 17926171 - 17926274
Alignment:
Q  209 gcaaacttaacttccctctccggcggtaattcggtaatatcgt-ctggaaaacttttggaaactcctgcactaccgataaatcaccaacccctttctcac 307  Q
    ||||||| |||||||||||||||||||||||||||||| |||| | ||||||||| ||||||||| ||||||||||  ||||| ||||  || |||||||    
T  17926171 gcaaactcaacttccctctccggcggtaattcggtaatgtcgtccgggaaaacttctggaaactcttgcactaccggaaaatcgccaattcccttctcac 17926270  T
Q  308 tact 311  Q
    ||||    
T  17926271 tact 17926274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 312
Target Start/End: Original strand, 22034563 - 22034721
Alignment:
Q  155 gacatccgatacggcgtagtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgt-ct 253  Q
    |||||||||| ||||| | ||||||||||||| |||||| | ||||||| |||| ||||||  ||||||||||||| | |||| |||||||| || | |     
T  22034563 gacatccgatgcggcgcaatcaaaataggacttgttcctggcaccaaatgaatttcaaactccacttccctctccgacagtaagtcggtaatctcatccg 22034662  T
Q  254 ggaaaacttttggaaactcctgcactaccgataaatcaccaacccctttctcactactt 312  Q
    ||||||||||| ||||||| | ||||||||  ||||| | ||| ||||| |||| ||||    
T  22034663 ggaaaacttttcgaaactcttacactaccgtaaaatcgctaactcctttatcaccactt 22034721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 8710028 - 8710113
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    ||||||||||||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  8710028 gaaacactcggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 8710113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 14334819 - 14334904
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    ||||||||||||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  14334819 gaaacactcggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 14334904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 10873113 - 10873198
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  10873113 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcaaataactcagaagcagacatacgata 10873198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 13688464 - 13688549
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  13688464 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 13688549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 15158904 - 15158819
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  15158904 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 15158819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 18588018 - 18587933
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||||||| |||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  18588018 gaaacactcggtttaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 18587933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 145; Significance: 3e-76; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 80 - 307
Target Start/End: Complemental strand, 16380356 - 16380128
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| | || |||    
T  16380356 gaaacactcggtctaataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactccgatgcagacatccgatacggcgcaatcgaaa 16380257  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||| |||||    
T  16380256 taggactcgtgcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcac 16380157  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    |||||  ||||||| ||||||||||||||    
T  16380156 taccggcaaatcactaacccctttctcac 16380128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 80 - 307
Target Start/End: Complemental strand, 16647952 - 16647724
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | || |||    
T  16647952 gaaacactcggtctaataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactctgatgcagacatccgatacggcgcaatcgaaa 16647853  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| | | ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||| |||||    
T  16647852 taggactcgtgcatggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcac 16647753  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    |||||  ||||||| ||| ||||||||||    
T  16647752 taccggcaaatcactaactcctttctcac 16647724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 73 - 295
Target Start/End: Complemental strand, 23025736 - 23025513
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||||| || || ||||  ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  23025736 ccacggagaaacactcggcctgataaactatttctcaagcaactcttctaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgca 23025637  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctg-gaaaacttttggaaact 271  Q
     || ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||| |  ||||||| | ||||||    
T  23025636 atcgaaataggactcgtacctagtaccaaatcaattgcaaactcaacttccctctccggcgataattcggtaatgtcgtccgaaaaaacttctcgaaact 23025537  T
Q  272 cctgcactaccgataaatcaccaa 295  Q
    | ||||||||||| ||||||||||    
T  23025536 cttgcactaccgacaaatcaccaa 23025513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 80 - 307
Target Start/End: Complemental strand, 1646797 - 1646569
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    |||||||| |||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||| | || |||    
T  1646797 gaaacacttggtctaataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactctgatgcagacatctgatacggcgcaatcgaaa 1646698  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||| ||||| ||||| |  |||||||| |||||    
T  1646697 taggactcgtgcctggtaccaaatcaattgcaaactcaacttccctctccagcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcac 1646598  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    |||||  |||||||  || ||||||||||    
T  1646597 taccggcaaatcacttactcctttctcac 1646569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 73 - 302
Target Start/End: Original strand, 14130760 - 14130991
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||||||||||| | ||| ||||||||||||||||  ||||| ||||| ||||||||||||||||||| ||||||||||||||||| |    
T  14130760 ccacggagaaacactcggtctaataatctgtttctcaagcaactcttctaactggttctttaattcacccaactctgatgtagacatccgatacggcgca 14130859  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg--aaaacttttggaaac 270  Q
     || |||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||   |||| || || ||  |||| || | |||||    
T  14130860 atcgaaatagaactcgttcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaatttactaatgtcatccggaaaaaaattctagaaac 14130959  T
Q  271 tcctgcactaccgataaatcaccaaccccttt 302  Q
    || ||||||||||  ||||||||||| |||||    
T  14130960 tcttgcactaccggcaaatcaccaactccttt 14130991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 16100306 - 16100546
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||||| || || ||||| | |||||| |||||||  |||||||||||| | ||||||||||||||||||||||||  |||||||| |    
T  16100306 ccacggagaaacactcggcctgataaactgttactcaagtaactcttctaactgcttcttctactcacccaactctgatgcagacatctaatacggcgca 16100405  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaact 271  Q
     || ||||||||||||| ||| ||||||||||||||||| ||| ||| |||||||| || ||||| ||||||||||| || || ||||||| ||||||||    
T  16100406 atcgaaataggactcgtgcctggtaccaaatcaattgcagactcaacctccctctctggtggtaactcggtaatatcctccggaaaaacttctggaaact 16100505  T
Q  272 cctgcactaccgataaatcaccaacccctttctcactactt 312  Q
    | ||||||||||  ||||||||||| || ||||||||||||    
T  16100506 cttgcactaccggcaaatcaccaactcccttctcactactt 16100546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 23998546 - 23998636
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcg 170  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  23998546 gaaacactcggtctaataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactccgatgcagacatccgatacggcg 23998636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 18401066 - 18401147
Alignment:
Q  202 atcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcactaccg 283  Q
    ||||||||||| || ||||||||||||||||||| | ||||||||||| || || ||||||| ||||||||| ||||||||||    
T  18401066 atcaattgcaa-ctcaacttccctctccggcggttactcggtaatatcatcaggaaaaacttctggaaactcttgcactaccg 18401147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 21567971 - 21567884
Alignment:
Q  83 acactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcg 170  Q
    ||||||||||| |  |||| ||| |||||||| |||| |||||| |||||||||||| ||||||| ||||| ||||| ||||| ||||    
T  21567971 acactcggtcttacaaacttcttatcaagcaagtcttccaactgtttcttcaattcagccaactcagatgctgacatacgatatggcg 21567884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 18796988 - 18797073
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||||||||| | ||||| ||| |||||||| |||| ||| || |||||||||||| | ||||| ||||| ||||| |||||    
T  18796988 gaaacactcggtcttacgaacttcttatcaagcaagtcttccaattgtttcttcaattcagcaaactcagatgctgacatacgata 18797073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 16574188 - 16574243
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaa 135  Q
    ||||||||||||||||  |||| |||||||||||| |||| |||||| ||||||||    
T  16574188 gaaacactcggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaa 16574243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 16621192 - 16621137
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaa 135  Q
    ||||||||||||||||  |||| |||||||||||| |||| |||||| ||||||||    
T  16621192 gaaacactcggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaa 16621137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 24293765 - 24293680
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  24293765 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 24293680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 3e-76; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 80 - 307
Target Start/End: Complemental strand, 21935208 - 21934980
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| | || |||    
T  21935208 gaaacactcggtctaataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactccgatgcagacatccgatacggcgcaatcgaaa 21935109  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||| |||||    
T  21935108 taggactcgtgcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcac 21935009  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    |||||  ||||||| ||||||||||||||    
T  21935008 taccggcaaatcactaacccctttctcac 21934980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 80 - 307
Target Start/End: Original strand, 23508032 - 23508260
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| | || |||    
T  23508032 gaaacactcggtctaataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactccgatgcagacatccgatacggcgcaatcgaaa 23508131  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||| |||||    
T  23508132 taggactcgtgcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcac 23508231  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    |||||  ||||||| ||||||||||||||    
T  23508232 taccggcaaatcactaacccctttctcac 23508260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 80 - 307
Target Start/End: Original strand, 24583558 - 24583786
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| | || |||    
T  24583558 gaaacactcggtctaataaactgtttctcaagcaactcttccaactgattcttcaattcacccaactccgatgcagacatccgatacggcgcaatcgaaa 24583657  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| | ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||| |||||    
T  24583658 taggactcgtgcctggcaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcac 24583757  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    |||||  ||||||  ||| ||||||||||    
T  24583758 taccggcaaatcattaactcctttctcac 24583786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 19772326 - 19772411
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    ||||||||||||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  19772326 gaaacactcggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 19772411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 41773208 - 41773293
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    ||||||||||||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  41773208 gaaacactcggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 41773293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 14997759 - 14997674
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  14997759 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 14997674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 16358868 - 16358953
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  16358868 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 16358953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 27612720 - 27612805
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  27612720 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcggaagcagacatacgata 27612805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 27666510 - 27666425
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  27666510 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 27666425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 27683420 - 27683335
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  27683420 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 27683335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 29474093 - 29474008
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  29474093 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcggaagcagacatacgata 29474008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 34568860 - 34568945
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  34568860 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 34568945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 40711146 - 40711231
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  40711146 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcggaagcagacatacgata 40711231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 168
Target Start/End: Complemental strand, 17267354 - 17267266
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacgg 168  Q
    |||||||| |||||||  |||| ||| |||||||| |||| |||||| |||||||||||| | ||||| || || ||||| || |||||    
T  17267354 gaaacactgggtctaacaaacttcttatcaagcaaatcttccaactgtttcttcaattcagctaactcagaagctgacatacggtacgg 17267266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 3e-76; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 80 - 307
Target Start/End: Original strand, 30139869 - 30140097
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| | || |||    
T  30139869 gaaacactcggtctaataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactccgatgcagacatccgatacggcgcaatcgaaa 30139968  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||| |||||    
T  30139969 taggactcgtgcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcac 30140068  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    |||||  ||||||| ||||||||||||||    
T  30140069 taccggcaaatcactaacccctttctcac 30140097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 80 - 307
Target Start/End: Original strand, 30149420 - 30149648
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| | || |||    
T  30149420 gaaacactcggtctaataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactccgatgcagacatccgatacggcgcaatcgaaa 30149519  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||| |||||    
T  30149520 taggactcgtgcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcac 30149619  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    |||||  ||||||| ||||||||||||||    
T  30149620 taccggcaaatcactaacccctttctcac 30149648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 80 - 307
Target Start/End: Complemental strand, 13965429 - 13965201
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||| ||||||||||| || |||    
T  13965429 gaaacactcggtctaataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactccgatgcagacatctgatacggcgtaatcgaaa 13965330  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||| |||||    
T  13965329 taggactcgtgcctggtactaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcac 13965230  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    |||||  ||||||| ||| ||||||||||    
T  13965229 taccggcaaatcactaactcctttctcac 13965201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 80 - 312
Target Start/End: Complemental strand, 15948547 - 15948314
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||||| ||||| ||||| ||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||| | || |||    
T  15948547 gaaacactcggcctaataaactgtttctcaagcaactcttctaactgtttcttcaattcacccaactctgatgcagacatccgatactgcgcaatcgaaa 15948448  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || || |||||||  |||||||| |||||    
T  15948447 taggactcgtgcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcatccggaaaaacttcaggaaactcttgcac 15948348  T
Q  279 taccgataaatcaccaacccctttctcactactt 312  Q
     |||| ||| |||||||| |||||||||||||||    
T  15948347 aaccggtaattcaccaactcctttctcactactt 15948314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 17200690 - 17200931
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||||| || || ||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  17200690 ccacggagaaacactcggcctgataaactgcttctcaagcaattcttctaactgcttcttcaattcacccaactctgatgcagacatctgatacggcgca 17200789  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgt-ctggaaaacttttggaaact 271  Q
     || ||||||||||| ||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||| || | | | ||||||||||||||||    
T  17200790 atcgaaataggactcattcctggtaccaaatcaattgcaaactcaactttcctctccggcggtaattcggtaatgtcatccagaaaaacttttggaaact 17200889  T
Q  272 cctgcactaccgataaatcaccaa-cccctttctcactactt 312  Q
    | ||||||||||  ||||||| || |||||||||||||||||    
T  17200890 cttgcactaccggcaaatcactaaccccctttctcactactt 17200931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 80 - 307
Target Start/End: Original strand, 15612166 - 15612394
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    |||||||| |||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||| | || |||    
T  15612166 gaaacacttggtctaataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactctgatgcagacatccaatacggcgcaatcgaaa 15612265  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctggaaa-acttttggaaactcctgcac 278  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||| |||||||| || |  |||||||| |||||    
T  15612266 taggactcgtgcctggtaccaaatcaattgcaaactcaacttccctctccagcggtaactcggtaatatcctctggaaagacctcaggaaactcttgcac 15612365  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    ||||   ||||||| ||| | ||||||||    
T  15612366 tacccgcaaatcactaactcttttctcac 15612394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 73 - 307
Target Start/End: Complemental strand, 6150937 - 6150702
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||||| || || ||||| ||||||||||||||||  ||||| ||||| ||||||||||||||||||||||||||||||||||  | |    
T  6150937 ccacggagaaacactcggcctgataaactgtttctcaagcaactcttctaactgtttctttaattcacccaactctgatgcagacatccgatacgatgca 6150838  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtct-ggaaaacttttggaaact 271  Q
     || ||||||||||||||||| |||||||||||||| |||||| |||||||||||| |||||||| ||||||||||| ||| | |||||||  |||||||    
T  6150837 atcgaaataggactcgttcctggtaccaaatcaatttcaaactcaacttccctctctggcggtaactcggtaatatcatctagaaaaacttcaggaaact 6150738  T
Q  272 cctgcactaccgataaatcaccaacccctttctcac 307  Q
    | ||||||||||  ||||||||||| ||||||||||    
T  6150737 cttgcactaccggcaaatcaccaactcctttctcac 6150702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 80 - 283
Target Start/End: Complemental strand, 8272476 - 8272272
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| ||||||||||||  ||||||||||||||||||||| | || |||    
T  8272476 gaaacactcggtctaataaactgcttctcaagcaactcttccaactgattcttcatttcacccaactccaatgcagacatccgatacggcgcaatcgaaa 8272377  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| ||||||||||||||||||||| |||||| ||||| |||||||| ||||||||||| ||||| ||||| |  |||||||| |||||    
T  8272376 taggactcgtgcctggtaccaaatcaattgcaaactcaacttctctctctggcggtaactcggtaatatcctctggaaaaacctaaggaaactcttgcac 8272277  T
Q  279 taccg 283  Q
    |||||    
T  8272276 taccg 8272272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 80 - 312
Target Start/End: Complemental strand, 3296451 - 3296218
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||| |||| || ||||||||||||||||| |||| ||||||||||||||| |||| |||||| ||||||||||||||||| |||  | |  |||    
T  3296451 gaaacactcagtctgataaactgcttctcaagcaagtcttccaactgcttcttcaactcacacaactccgatgcagacatccgatatggcacaattgaaa 3296352  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    ||||||| |||||| | |||||||||||||||||||  ||||| ||||| ||| |||| |||||||| || ||||| ||||||||||| ||||| |||||    
T  3296351 taggacttgttcctggcaccaaatcaattgcaaactccacttctctctctggcagtaagtcggtaatgtcatctggaaaaacttttgggaactcttgcac 3296252  T
Q  279 taccgataaatcaccaacccctttctcactactt 312  Q
    |||||  ||||  | ||| | |||||||||||||    
T  3296251 taccggcaaatagctaactcatttctcactactt 3296218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 20060131 - 20060046
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    ||||||||||||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  20060131 gaaacactcggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 20060046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 5108688 - 5108633
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaa 135  Q
    ||||||||||||||||  |||| |||||||||||| |||| |||||| ||||||||    
T  5108688 gaaacactcggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaa 5108633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 13254743 - 13254798
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaa 135  Q
    ||||||||||||||||  |||| |||||||||||| |||| |||||| ||||||||    
T  13254743 gaaacactcggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaa 13254798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 25768379 - 25768421
Alignment:
Q  78 gagaaacactcggtctaatgaactgcttctcaagcaactcttt 120  Q
    ||||||||||||| || || |||||||||||||||||||||||    
T  25768379 gagaaacactcggcctgataaactgcttctcaagcaactcttt 25768421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 10908263 - 10908348
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  10908263 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 10908348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 12888762 - 12888847
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  12888762 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 12888847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 15346322 - 15346237
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    ||||||||||||||||  |||| |||||||||||| ||||  ||||| |||||||| |||   ||||| || |||||||| |||||    
T  15346322 gaaacactcggtctaacaaacttcttctcaagcaagtcttctaactgtttcttcaactcagataactcagaagcagacatacgata 15346237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 15587469 - 15587384
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  15587469 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcggaagcagacatacgata 15587384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 15714133 - 15714048
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  15714133 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcggaagcagacatacgata 15714048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 16637826 - 16637911
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  16637826 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 16637911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 43164728 - 43164813
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  43164728 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 43164813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 145; Significance: 3e-76; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 80 - 307
Target Start/End: Complemental strand, 20829302 - 20829074
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| | || |||    
T  20829302 gaaacactcggtctaataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactccgatgcagacatccgatacggcgcaatcgaaa 20829203  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||| |||||    
T  20829202 taggactcgtgcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcac 20829103  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    |||||  ||||||| ||||||||||||||    
T  20829102 taccggcaaatcactaacccctttctcac 20829074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 95 - 312
Target Start/End: Complemental strand, 22133647 - 22133429
Alignment:
Q  95 atgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaataggactcgttccta 194  Q
    |||||| |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||| | || |||||||||||||||||     
T  22133647 atgaaccgcttctcaagcaactcttccagctgcttcttcagttcacccaactctgatgcagacatccgatacggcgcaatcgaaataggactcgttcctg 22133548  T
Q  195 gtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgt-ctggaaaacttttggaaactcctgcactaccgataaatcacc 293  Q
    |||||||||||||||||||| |||||||||||| ||||| ||| |||||||| |||| | | ||||||| ||||||||| ||||||||||  ||||||||    
T  22133547 gtaccaaatcaattgcaaacctaacttccctcttcggcgataactcggtaatgtcgtccagaaaaacttctggaaactcttgcactaccggcaaatcacc 22133448  T
Q  294 aacccctttctcactactt 312  Q
    ||| ||||| |||| ||||    
T  22133447 aactcctttttcaccactt 22133429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 41215773 - 41215533
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||||| || || |||| ||||| ||| |||||||  ||||| |||||||| ||| |||||||||||||||||||||||||||||| |    
T  41215773 ccacggagaaacactcggcctgataaactacttcttaagtaactcttctaactgtttcttcaactcagccaactctgatgcagacatccgatacggcgca 41215674  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaact 271  Q
     || ||||||||||||||| | |||||||| |||||||||||| ||||||||||||||||| |||||| ||||  |||||||| ||||||| ||||||||    
T  41215673 atcgaaataggactcgttcttggtaccaaaccaattgcaaactcaacttccctctccggcgataattccgtaaggtcgtctggaaaaacttctggaaact 41215574  T
Q  272 cctgcactaccgataaatcaccaacccctttctcactactt 312  Q
    | ||||||||||  ||||||||||||| |||||| ||||||    
T  41215573 cttgcactaccggcaaatcaccaacccttttctcgctactt 41215533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 73 - 307
Target Start/End: Original strand, 20927496 - 20927731
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| |||| |||||  ||||||| ||||| ||||||||||||||||  ||||| ||||||||||||||||||||| ||||||||||||||||||| |||    
T  20927496 ccacggagatacacttcgtctaataaactgtttctcaagcaactcttctaactgtttcttcaattcacccaactctaatgcagacatccgatacggtgta 20927595  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaact 271  Q
     || ||||||||||||||||| ||||||||||| ||||||||| |||||||||||||| |||||| ||||||||||| || || |||||||   ||||||    
T  20927596 atcgaaataggactcgttcctggtaccaaatcatttgcaaactcaacttccctctccgacggtaactcggtaatatcttccggaaaaacttcaagaaact 20927695  T
Q  272 cctgcactaccgataaatcaccaacccctttctcac 307  Q
    | ||||||||||  ||||||| | | ||||||||||    
T  20927696 cttgcactaccggcaaatcactagctcctttctcac 20927731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 73 - 307
Target Start/End: Original strand, 20527495 - 20527730
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||||| || || ||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||| ||  ||||||||| |    
T  20527495 ccacggagaaacactcggcctgataaactgcttctcaagcaactcttctaactgcttctgcaattcacccaactctgatgcagatatttgatacggcgca 20527594  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaact 271  Q
     |  |||||| |||||| ||| ||||||||||||||||||||| ||||||||||||||||||||  ||||||||||| ||||| |||||||  ||||||     
T  20527595 atagaaatagaactcgtgcctggtaccaaatcaattgcaaactcaacttccctctccggcggtagctcggtaatatcatctggaaaaacttcaggaaaca 20527694  T
Q  272 cctgcactaccgataaatcaccaacccctttctcac 307  Q
    | ||||||||||  ||||||| | | ||||||||||    
T  20527695 cttgcactaccggcaaatcactagctcctttctcac 20527730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 80 - 312
Target Start/End: Complemental strand, 21200864 - 21200631
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||||| || || || |||||||| |||||||||| |||||| |||||||| |||||||| || || || ||||||||||||| |  | ||||||    
T  21200864 gaaacactcggcctgataaaatgcttctcgagcaactcttccaactgtttcttcaactcacccaattccgacgcggacatccgatacgccacaatcaaaa 21200765  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtc-tggaaaacttttggaaactcctgcac 278  Q
    || | || ||||||   |||||||||||| | ||||  ||||| |||||||||||||| ||| |||| |||||  ||||||||| ||||||| | |||||    
T  21200764 tatggcttgttcctttcaccaaatcaatttctaactccacttctctctccggcggtaagtcgataatgtcgtcggggaaaacttctggaaacacttgcac 21200665  T
Q  279 taccgataaatcaccaacccctttctcactactt 312  Q
    || || |||||| | ||| | |||||||| ||||    
T  21200664 tatcggtaaatcgctaactcatttctcacgactt 21200631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 280
Target Start/End: Complemental strand, 10400967 - 10400839
Alignment:
Q  155 gacatccgatacggcgtagtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctc--cggcggtaattcggtaatatcgtc 252  Q
    ||||| ||||| || || ||||||||| |||| |||||| ||||||||||||| |||||||| || || |||||  ||||||||| ||| |||| || ||    
T  10400967 gacattcgataaggtgtcgtcaaaataagacttgttcctggtaccaaatcaatcgcaaacttcacctctctctcttcggcggtaagtcgataatgtcatc 10400868  T
Q  253 tg-gaaaacttttggaaactcctgcacta 280  Q
    ||  ||||||| ||||||||| |||||||    
T  10400867 tgaaaaaacttatggaaactcttgcacta 10400839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 21832751 - 21832836
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    ||||||||||||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  21832751 gaaacactcggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 21832836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 21233641 - 21233556
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  || | |||||||||||| ||||  ||||| |||||||||||| | ||||| || |||||||| |||||    
T  21233641 gaaacacttggtctaacaaatttcttctcaagcaattcttctaactgtttcttcaattcagctaactcggaagcagacatacgata 21233556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 33388939 - 33388854
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    ||||||||||||||||  ||||  ||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  33388939 gaaacactcggtctaacaaactttttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 33388854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 51331402 - 51331317
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  51331402 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 51331317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 80 - 307
Target Start/End: Complemental strand, 5648 - 5419
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    |||||||| |||||||| |||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  5648 gaaacacttggtctaataaactgcttctcaagcaactcctccaactgattcttcaattcacccaactctgatgcagacatccgatacggcgcaatcaaaa 5549  T
Q  180 t-aggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgca 277  Q
    | ||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||| ||||    
T  5548 taaggactcgtgcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgca 5449  T
Q  278 ctaccgataaatcaccaacccctttctcac 307  Q
    ||||||  ||||||| ||||||||||||||    
T  5448 ctaccggcaaatcactaacccctttctcac 5419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 80 - 307
Target Start/End: Complemental strand, 13466 - 13238
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    |||||||| |||||||| ||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||| ||||||||| | || |||    
T  13466 gaaacacttggtctaataaactgcttctcaagcaactcttctaactgtttcttcaattcacccaactctgatgcagacatctgatacggcgcaatcgaaa 13367  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||  |||||||| |||||    
T  13366 taggactcgttcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcatctggaaaaacttcaggaaactcttgcac 13267  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    |||||  ||||||| | | ||||||||||    
T  13266 taccggcaaatcactagctcctttctcac 13238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 80 - 307
Target Start/End: Original strand, 23426 - 23654
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    |||||||| |||||||| |||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||| | || |||    
T  23426 gaaacacttggtctaataaactgcttctcaagcaactcctccaactgattcttcaattcacccaactctgatgcagacatccgatacggcgcaatcgaaa 23525  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||| |||||    
T  23526 taggactcgtgcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcac 23625  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    |||||  ||||||| ||| ||||||||||    
T  23626 taccggcaaatcactaactcctttctcac 23654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 2e-71; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 84 - 307
Target Start/End: Complemental strand, 15290992 - 15290768
Alignment:
Q  84 cactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaatagg 183  Q
    ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | || |||||||    
T  15290992 cactcggtctaataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactctgatgcagacatccgatacggcgcaatcgaaatagg 15290893  T
Q  184 actcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcactacc 282  Q
    |||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||| |||||||||    
T  15290892 actcgtgcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcactacc 15290793  T
Q  283 gataaatcaccaacccctttctcac 307  Q
       ||||||| ||| ||||||||||    
T  15290792 agcaaatcactaactcctttctcac 15290768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 104 - 312
Target Start/End: Complemental strand, 12340680 - 12340472
Alignment:
Q  104 ttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaataggactcgttcctagtaccaaat 203  Q
    ||||| |||||||||| ||||||||||||||  |||| |||||||||||||||||||||||| |||| | || ||||||||||||||||| |||||||||    
T  12340680 ttctcgagcaactcttccaactgcttcttcagctcactcaactctgatgcagacatccgatatggcgcaatcgaaataggactcgttcctggtaccaaat 12340581  T
Q  204 caattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctggaaaacttttggaaactcctgcactaccgataaatcaccaacccctttc 303  Q
     |||| ||||||  ||||| |||||||| ||||| |||||||| ||||| ||||||| | ||||| ||| ||||||||||  ||||| ||||| ||||||    
T  12340580 taatttcaaactccacttctctctccggtggtaaatcggtaatgtcgtccggaaaacatctggaagctcttgcactaccggcaaatcgccaactcctttc 12340481  T
Q  304 tcactactt 312  Q
    |||||||||    
T  12340480 tcactactt 12340472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 23958181 - 23958266
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    ||||||||||||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  23958181 gaaacactcggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 23958266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 27713770 - 27713855
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    ||||||||||||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  27713770 gaaacactcggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 27713855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 8051201 - 8051116
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  8051201 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 8051116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 16251428 - 16251343
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  || | |||||||||||| ||||  ||||| |||||||||||| | ||||| || |||||||| |||||    
T  16251428 gaaacacttggtctaacaaatttcttctcaagcaaatcttctaactgtttcttcaattcagctaactcggaagcagacatacgata 16251343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 19776371 - 19776286
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  19776371 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 19776286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 80 - 307
Target Start/End: Original strand, 4459 - 4687
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||  ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | || |||    
T  4459 gaaacacttagtctaataaactgcttctcaagcaactcttccaactgtttcttcaattcacccaactctgatgcagacatccgatacggcgcaatcgaaa 4558  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||  |||||||| |||||    
T  4559 taggactcgtgcctggtactaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcctctggaaaaacttcaggaaactcttgcac 4658  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    |||||  ||||||| | | ||||||||||    
T  4659 taccggcaaatcactagctcctttctcac 4687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 80 - 311
Target Start/End: Complemental strand, 1462 - 1230
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    |||||||| |||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||   || |||    
T  1462 gaaacacttggtctaataaactgcttctcaagcaactcttccaactgtttcttcaattcacccaactctgatgcagacatctgatacggcgccatcgaaa 1363  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| || |||||||  |||||| | |||||    
T  1362 taggactcgtgcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcgtccggaaaaacttcaggaaacacttgcac 1263  T
Q  279 taccgataaatcaccaacccctttctcactact 311  Q
     ||||  || |||||||| ||||||||||||||    
T  1262 aaccggcaattcaccaactcctttctcactact 1230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 4e-69; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 22436796 - 22437036
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||||  || || |||| |||||||||||||||||  |||||||||||||||||||| ||||| |||||||||||||||||||||| |    
T  22436796 ccacggagaaacactcgccctgataaactacttctcaagcaactcttctaactgcttcttcaattcaccgaactccgatgcagacatccgatacggcgca 22436895  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaact 271  Q
     || ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||    
T  22436896 atcgaaataggactcgttcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaact 22436995  T
Q  272 cctgcactaccgataaatcaccaacccctttctcactactt 312  Q
    | ||||||||||  ||||||| |||||||||||||| ||||    
T  22436996 cttgcactaccggcaaatcactaacccctttctcacaactt 22437036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 100 - 307
Target Start/End: Complemental strand, 24932085 - 24931877
Alignment:
Q  100 ctgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaataggactcgttcctagtacc 199  Q
    ||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||| | || ||||| ||||||||||| |||||    
T  24932085 ctgcttctcaagcaactcttctaactgtttcttcaattcacccaactctgatgcagacatccgatacggcgcaatcgaaataagactcgttcctggtacc 24931986  T
Q  200 aaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcactaccgataaatcaccaaccc 298  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||  |||||||| ||||||||||| || |||| | | |    
T  24931985 aaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcatctggaaaaacttcaggaaactcttgcactaccgacaattcactagctc 24931886  T
Q  299 ctttctcac 307  Q
    |||||||||    
T  24931885 ctttctcac 24931877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 73 - 258
Target Start/End: Complemental strand, 21194828 - 21194643
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||||| || || ||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21194828 ccacggagaaacactcggcctgataaactgcttctcaagcaattcttctaactgcttcttcaattcacccaactctgatgcagacatcggatacggcgta 21194729  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctggaaa 258  Q
     || ||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||| || ||||||||    
T  21194728 atccaaataggactcattcctggtaccaaatcaattgcaaactcaacttccctctccagcggtaattcggtaatgtcttctggaaa 21194643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 23902657 - 23902895
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| |||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  23902657 ccacggagaaaaactcagtctaatgaactgcttctcaagcaactcttccaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgca 23902756  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaact 271  Q
     || |||||||||||||||||  ||||||||||||||||||||  ||||  ||||| |||||||| ||  |||| || || || ||||||| ||||||||    
T  23902757 atcgaaataggactcgttcctgataccaaatcaattgcaaactctactt--ctctctggcggtaactcaataatgtcatccggaaaaacttctggaaact 23902854  T
Q  272 cctgcactaccgataaatcaccaacccctttctcactactt 312  Q
    | ||||||||||| |||||||  |||||||| ||| |||||    
T  23902855 cttgcactaccgacaaatcacggacccctttttcattactt 23902895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 80 - 304
Target Start/End: Complemental strand, 21848618 - 21848393
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    |||||||| ||||| || |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | |  |||    
T  21848618 gaaacacttggtctgataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactctgatgcagacatccgatacggcgcaattgaaa 21848519  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    || ||||||| ||| ||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||| |||||    
T  21848518 taagactcgtgcctggtaccaaatcaattgcaaactcaacctccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcac 21848419  T
Q  279 taccgataaatcaccaacccctttct 304  Q
    |||||  ||||| | ||| |||||||    
T  21848418 taccggcaaatcgctaactcctttct 21848393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 98 - 311
Target Start/End: Complemental strand, 20650618 - 20650404
Alignment:
Q  98 aactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaataggactcgttcctagta 197  Q
    |||| |||||||||||||||||  ||||| |||||||||||| |||||||||||||||||||||||||||| | | || ||||||||||||| ||| |||    
T  20650618 aacttcttctcaagcaactcttctaactgtttcttcaattcatccaactctgatgcagacatccgatacggtgcaatcgaaataggactcgtgcctggta 20650519  T
Q  198 ccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtct-ggaaaacttttggaaactcctgcactaccgataaatcaccaac 296  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||| |  | |||||| | ||||||||  |||||||||||    
T  20650518 ccatatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcatctgggaaaacctccgaaaactcttccactaccggcaaatcaccaac 20650419  T
Q  297 ccctttctcactact 311  Q
     || |||||||||||    
T  20650418 tcccttctcactact 20650404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 23155330 - 23155090
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||||| || || |||| |||||||||||| ||||  ||||| ||||| | ||||||||||||||||| |||||||||||||| || |    
T  23155330 ccacggagaaacactcggcctgataaactacttctcaagcaattcttctaactgtttcttgagttcacccaactctgatgaagacatccgatacgacgaa 23155231  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctggaaaacttt-tggaaact 271  Q
     || ||||||||||||||||| | ||||||||||||||||||| |||||||||| ||| | ||||||||||||| |||||   |||| ||| || |||||    
T  23155230 atcgaaataggactcgttcctggcaccaaatcaattgcaaactcaacttccctccccgacagtaattcggtaatgtcgtccaaaaaaatttctgcaaact 23155131  T
Q  272 cctgcactaccgataaatcaccaacccctttctcactactt 312  Q
    | ||||||||||  ||||||||||| |||||||||||||||    
T  23155130 cttgcactaccggcaaatcaccaactcctttctcactactt 23155090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 73 - 283
Target Start/End: Original strand, 16414584 - 16414795
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| |||||| ||||||||| || ||||||||||||||||| ||||  ||||| | ||| |||||||||||||||||||||||||| |||||||||| |    
T  16414584 ccacggagaaatactcggtctgataaactgcttctcaagcaattcttctaactgttccttaaattcacccaactctgatgcagacattcgatacggcgca 16414683  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaact 271  Q
     || ||||||||||| | ||| |||||||||||||||||||||  |||||||||||||||||||| ||||||||||| || || |||||||  | |||||    
T  16414684 atcgaaataggactcatgcctggtaccaaatcaattgcaaactcgacttccctctccggcggtaactcggtaatatcatccggaaaaacttcagcaaact 16414783  T
Q  272 cctgcactaccg 283  Q
    | ||||||||||    
T  16414784 cttgcactaccg 16414795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 16875376 - 16875291
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||    
T  16875376 gaaacactcggtctaataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactccgatgcagacatccgata 16875291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 25283558 - 25283674
Alignment:
Q  197 accaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtct-ggaaaacttttggaaactcctgcactaccgataaatcaccaa 295  Q
    |||||||||||||||| ||  ||||| ||||||||| |||| |||||||| |||||| ||||||||| || ||| || ||||||| |   ||||||||||    
T  25283558 accaaatcaattgcaacctccacttctctctccggcagtaaatcggtaatgtcgtctgggaaaacttctgaaaattcttgcactatcagcaaatcaccaa 25283657  T
Q  296 cccctttctcactactt 312  Q
    | |||||||||||||||    
T  25283658 ctcctttctcactactt 25283674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 17672304 - 17672219
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    ||||||||||||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  17672304 gaaacactcggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 17672219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 20016544 - 20016459
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    ||||||||||||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  20016544 gaaacactcggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 20016459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 224
Target Start/End: Complemental strand, 24630912 - 24630803
Alignment:
Q  115 ctctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaataggactcgttcctagtaccaaatcaattgcaaac 214  Q
    ||||| ||||| |||||| || |||| ||| |||||| ||||||||||||| || |  |||||||||||||| || |   ||||||||||||| ||||||    
T  24630912 ctcttccaactacttctttaactcacacaattctgatacagacatccgatatggtgccgtcaaaataggactagtactaggtaccaaatcaatcgcaaac 24630813  T
Q  215 ttaacttccc 224  Q
    |  |||||||    
T  24630812 tccacttccc 24630803  T

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Target: scaffold1488 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 78 - 312
Target Start/End: Complemental strand, 648 - 413
Alignment:
Q  78 gagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaa 177  Q
    |||| |||||||| ||||| || | ||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||    || |    
T  648 gagacacactcggcctaataaaatacttctcaagcaactcttccaactacttcttcaattcacccaaatctgatgcagacatccgatacggcacgatcga 549  T
Q  178 aataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgc 276  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| || ||||||| ||||||||| |||    
T  548 aataggactcgttcctggcaccaaatcaattgcaaactgaacttccctctccggcggtaattcggtaatttcgtccggaaaaacttctggaaactcttgc 449  T
Q  277 actaccgataaatcaccaacccctttctcactactt 312  Q
    ||||| |  ||||||||||| |||||||||||||||    
T  448 actactggcaaatcaccaactcctttctcactactt 413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 80 - 306
Target Start/End: Complemental strand, 8667 - 8440
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    |||||||| |||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | || |||    
T  8667 gaaacacttggtctaataaactgcttctcaagcaactcttccaactgattcttcaattcacccaactctgatgcagacatccgatacggcgcaatcgaaa 8568  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctg-gaaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||| ||||  |||||||  |||||||| |||||    
T  8567 taggactcgtgcctggtaccaaatcaattgcaaactcaacttccctctacggcggtaactcggtaatatcctctgcaaaaacttcaggaaactcttgcac 8468  T
Q  279 taccgataaatcaccaacccctttctca 306  Q
    |||||  ||||||| | | |||||||||    
T  8467 taccggcaaatcactagctcctttctca 8440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 9e-67; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 25130667 - 25130907
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| |||||||||| || ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25130667 ccacggagaaacacttggcctaataaactgcttctcaagcaactcttctaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgca 25130766  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaact 271  Q
     || |||||| |||||||||| ||||||||||||||||| ||| |||||||||||||  ||||||||  ||||| | ||| || ||||||| ||||||||    
T  25130767 atcgaaatagaactcgttcctggtaccaaatcaattgcagactcaacttccctctccaccggtaatttagtaatgttgtccggaaaaacttctggaaact 25130866  T
Q  272 cctgcactaccgataaatcaccaacccctttctcactactt 312  Q
    | ||||||||||  |||||||| |||| |||||||||||||    
T  25130867 cttgcactaccggcaaatcacccacccttttctcactactt 25130907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 80 - 259
Target Start/End: Complemental strand, 24829566 - 24829387
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||  | || |||    
T  24829566 gaaacactcggtctaataaactgcttctcaagcaactcttccaactgatttttcaattcacccaactctgatgcagacatccgatacggcacaatcgaaa 24829467  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctggaaaa 259  Q
    |||||||||| ||| ||||||||||||||||||||| |||||||||||||||| |||| ||||||||||| |||||||||    
T  24829466 taggactcgtgcctggtaccaaatcaattgcaaactcaacttccctctccggccgtaactcggtaatatcctctggaaaa 24829387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 98 - 309
Target Start/End: Complemental strand, 22759931 - 22759719
Alignment:
Q  98 aactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaataggactcgttcctagta 197  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||| |||| | || ||||||||||||||||  |||    
T  22759931 aactgcttctcaagcaactcttccaactgcttcttcaattcacccaactctgatgcagacatttgatatggcgcaatcgaaataggactcgttccaggta 22759832  T
Q  198 ccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcactaccgataaatcaccaac 296  Q
    |||||||||||||||||| |||||||||||||  ||||||||| ||||| ||||| || ||||||| ||||||||| |||| |||||  |||||||||||    
T  22759831 ccaaatcaattgcaaactcaacttccctctccaacggtaattcagtaatttcgtccggaaaaacttctggaaactcttgcattaccggcaaatcaccaac 22759732  T
Q  297 ccctttctcacta 309  Q
     ||||||||||||    
T  22759731 tcctttctcacta 22759719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 78 - 312
Target Start/End: Complemental strand, 24568048 - 24567813
Alignment:
Q  78 gagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaa 177  Q
    |||||||||||||  | || |||||||||||||| |||||||  ||||||| ||||||||||||||||| ||||||||||||||||||||||| | || |    
T  24568048 gagaaacactcggcttgataaactgcttctcaagaaactcttctaactgctgcttcaattcacccaactttgatgcagacatccgatacggcgcaatcga 24567949  T
Q  178 aataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgc 276  Q
    |||||||||| ||| | | ||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| || ||||||| |||||||||||||    
T  24567948 aataggactcattcatggcaccaaatcaattgcaaactcaacttccctctccggcggtaattcagtaatgtcgtccggaaaaacttctggaaactcctgc 24567849  T
Q  277 actaccgataaatcaccaacccctttctcactactt 312  Q
    |||||||  || |||||| | |||||||||| ||||    
T  24567848 actaccggcaattcaccagctcctttctcaccactt 24567813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 80 - 306
Target Start/End: Original strand, 22280170 - 22280397
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    |||||||| |||||||| |||||||||| |||||||||||  || || ||||||||||||||||||||||||||||||||| |||||| || | |||||     
T  22280170 gaaacacttggtctaataaactgcttctgaagcaactcttctaattgtttcttcaattcacccaactctgatgcagacatctgatacgacgcaatcaaat 22280269  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| | | ||||||||||||||||||||| |||||| |||||||||||||| || |||||||| || || |||||||   ||||||| |||||    
T  22280270 taggactcgtgcttggtaccaaatcaattgcaaactcaacttctctctccggcggtaactcagtaatatcatccggaaaaacttcaagaaactcttgcac 22280369  T
Q  279 taccgataaatcaccaacccctttctca 306  Q
    |||||  ||||||| | | |||||||||    
T  22280370 taccggcaaatcactagctcctttctca 22280397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 73 - 296
Target Start/End: Original strand, 27541544 - 27541768
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| |||||||||| | ||  || ||||| ||||| | ||||||||  | |||||||||||| |||||||| |||||||| |||||| |||| || ||     
T  27541544 ccacggagaaacacttgatcagataaactgattctccaacaactcttatatctgcttcttcaactcacccaattctgatgcggacatctgataaggtgtc 27541643  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatc-gtctggaaaacttttggaaact 271  Q
    ||| ||||  |||| |||||| ||| ||| | |||||||||||  || || || || |||||||  | |||||||||  || ||||||||||||||||||    
T  27541644 gtcgaaatgcgacttgttccttgtatcaattaaattgcaaactccacctctctatctggcggtatgttggtaatatcaatcgggaaaacttttggaaact 27541743  T
Q  272 cctgcactaccgataaatcaccaac 296  Q
    | || ||||||| |||||| |||||    
T  27541744 cttgtactaccggtaaatcgccaac 27541768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 24264435 - 24264520
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    ||||||||||||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  24264435 gaaacactcggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 24264520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 24712099 - 24712184
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    ||||||||||||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  24712099 gaaacactcggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 24712184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 9337647 - 9337732
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  9337647 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 9337732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 9486281 - 9486366
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  9486281 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 9486366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 10870915 - 10871000
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  10870915 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 10871000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 27220081 - 27220166
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  27220081 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 27220166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 44383948 - 44383863
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  44383948 gaaacacttggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 44383863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 73 - 311
Target Start/End: Original strand, 34543 - 34780
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||||||||||| |||||||||  ||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| |    
T  34543 ccacggagaaacactcggtctaataaactgcttc--aagcaactcttccaactgtttcttcaattcacccaactcagatgcagacatccgatacggcgca 34640  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaact 271  Q
     || ||||| ||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||  |||||||    
T  34641 atcgaaataagactcgtacctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcatctggaaaaacttcaggaaact 34740  T
Q  272 cctgcactaccgataaatcaccaacccctttctcactact 311  Q
    | ||||| ||||  || |||||||| |  |||||||||||    
T  34741 cttgcacaaccggcaattcaccaactctcttctcactact 34780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 125; Significance: 2e-64; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 7613 - 7853
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||||| || || ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  7613 ccacggagaaacactcggcctgataaactgcttctcaagcaactcttctaactgcttcttcaattcacccaactctgatgcagacatccgatatggcgca 7712  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaact 271  Q
     |  ||||||||||||||||  ||||||||||||||||||||| ||||||||||||||| ||||| ||| ||||||| || || ||||| |  |||||||    
T  7713 attgaaataggactcgttccaggtaccaaatcaattgcaaactaaacttccctctccggtggtaactcgataatatcatccggaaaaacctccggaaact 7812  T
Q  272 cctgcactaccgataaatcaccaacccctttctcactactt 312  Q
    | ||||||||||  ||||||||||| || ||||||||||||    
T  7813 cttgcactaccggcaaatcaccaactcccttctcactactt 7853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 99 - 312
Target Start/End: Complemental strand, 21677 - 21462
Alignment:
Q  99 actgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaataggactcgttcctagtac 198  Q
    |||||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||||||| ||||||||| | |  ||||||||||||||| | ||||    
T  21677 actgcttctcaagcaattcttataactgtttcttcaattcacccaactctgatgcagacatctgatacggcgcaattgaaataggactcgttcttggtac 21578  T
Q  199 caaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgt-ctggaaaacttttggaaactcctgcactaccgataaatcaccaa-c 296  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||| |||| |   ||||||| ||||||||| ||||||||||  |||||||||| |    
T  21577 caaatcaattgcaaattcaacttccctctccggcggtaattcagtaatgtcgtccaaaaaaacttctggaaactcttgcactaccggcaaatcaccaacc 21478  T
Q  297 ccctttctcactactt 312  Q
    ||||||||||||||||    
T  21477 ccctttctcactactt 21462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 99 - 312
Target Start/End: Complemental strand, 31253 - 31038
Alignment:
Q  99 actgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaataggactcgttcctagtac 198  Q
    |||||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||||||| ||||||||| | |  ||||||||||||||| | ||||    
T  31253 actgcttctcaagcaattcttataactgtttcttcaattcacccaactctgatgcagacatctgatacggcgcaattgaaataggactcgttcttggtac 31154  T
Q  199 caaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgt-ctggaaaacttttggaaactcctgcactaccgataaatcaccaa-c 296  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||| |||| |   ||||||| ||||||||| ||||||||||  |||||||||| |    
T  31153 caaatcaattgcaaattcaacttccctctccggcggtaattcagtaatgtcgtccaaaaaaacttctggaaactcttgcactaccggcaaatcaccaacc 31054  T
Q  297 ccctttctcactactt 312  Q
    ||||||||||||||||    
T  31053 ccctttctcactactt 31038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 73 - 249
Target Start/End: Original strand, 89958 - 90134
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||||| || || |||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| || |    
T  89958 ccacggagaaacactcggcctgataaactgcttctcaagcaactcttccaactatttcttcaattcacccaactctgatgcagacatccgatacgacgca 90057  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatc 249  Q
     |  | ||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||| || ||||||||    
T  90058 atagatataggactcgttcctggtaccaaatcaactgcaaactcaacttccctctccggcggtaactcagtaatatc 90134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 89 - 281
Target Start/End: Complemental strand, 132321 - 132128
Alignment:
Q  89 ggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaataggactcg 188  Q
    |||||||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||    
T  132321 ggtctaataaactgtttctcaagcaactcttccaactgtttcttcaattcacccaactctgatgcagacatccgatacggcgcaatcgaaataggactcg 132222  T
Q  189 ttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcactac 281  Q
    |||||  |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || || |||||||  |||||||| ||||||||    
T  132221 ttccttttaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcatccggaaaaacttcaggaaactcttgcactac 132128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 98 - 307
Target Start/End: Original strand, 26252 - 26468
Alignment:
Q  98 aactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgt------agtcaaaataggactcgttc 191  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||||||||||||| ||||||| ||||||||||      | || |||||||||| || |    
T  26252 aactgcttctcaagcaactcttctaactgtttcttcaattcacccaactctgatgtagacatctgatacggcgtaatcgaaatcgaaataggacttgtgc 26351  T
Q  192 ctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcactaccgataaatc 290  Q
     | ||||||||||||||||||||| |||||||||||| |||||||| | ||||||||| || || |||||||   ||||||| || |||||||  |||||    
T  26352 atggtaccaaatcaattgcaaactcaacttccctctctggcggtaactaggtaatatcatccggaaaaacttcaagaaactcttgtactaccggcaaatc 26451  T
Q  291 accaacccctttctcac 307  Q
    || | | ||||||||||    
T  26452 actagctcctttctcac 26468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 121; Significance: 5e-62; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 80 - 307
Target Start/End: Complemental strand, 11015 - 10787
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    |||||||| |||||||| |||||||||||||  |||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  11015 gaaacacttggtctaataaactgcttctcaaataactcttctaactgtttcttcaattcacccaactctgatgcagacatccgatacggcgcaatcaaaa 10916  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||   ||| |||||||  |||||||| |||||    
T  10915 taggactcgttcctggtaccaaatcaattgtaaactcaacttccctctccggcggtaactcggtaacatcacttggaaaaacttcaggaaactcttgcac 10816  T
Q  279 taccgataaatcaccaacccctttctcac 307  Q
    |||||  ||||||| | | ||||||||||    
T  10815 taccggcaaatcactagctcctttctcac 10787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 80 - 259
Target Start/End: Original strand, 15373 - 15552
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    |||| ||| |||||||| ||||| ||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||    
T  15373 gaaatacttggtctaataaactgtttctcaagcaactcttctaactgtttcttcaattcacccaactctgatgcagacatccgatacggcgtaatcgaaa 15472  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctggaaaa 259  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || ||||||    
T  15473 taggtctcgttcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcggtaatatcatccggaaaa 15552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 80 - 282
Target Start/End: Original strand, 676 - 879
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    |||||||| |||||||| |  ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||| |||| | || |||    
T  676 gaaacacttggtctaataagttgcttctcaagcaactcttccaactgtttcttcaattcacccaactctgatgcagacatccaataaggcgcaatcgaaa 775  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || |||||||| ||||| |||||||  |||||||| |||||    
T  776 taggactcgttcctggtaccaaatcaattgcaaactcaacttccctctccggcggtaactcagtaatatcctctggaaaaacttcaggaaactcttgcac 875  T
Q  279 tacc 282  Q
    ||||    
T  876 tacc 879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 7618 - 7699
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatcc 161  Q
    |||||||| |||||||| |  ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  7618 gaaacacttggtctaataagttgcttctcaagcaactcttccaactgtttcttcaattcacccaactctgatgcagacatcc 7699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 24634 - 24874
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||| | || || ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  24634 ccacggagaaacactcagcctgataaactgcttctcaagcaactcttctaactgcttcttcaattcacccaactctgatgcagagatccgatacggcgca 24733  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctggaaaa-cttttggaaact 271  Q
     || |||||||||||||| || ||||||||||||||||||||| ||||||||||||| || | || || |||||||| ||||||||| | |  | |||||    
T  24734 atcgaaataggactcgttactggtaccaaatcaattgcaaactcaacttccctctccagcagcaactctgtaatatcatctggaaaaacctccgcaaact 24833  T
Q  272 cctgcactaccgataaatcaccaacccctttctcactactt 312  Q
    | ||||||||||  ||||||||||| |||||||||| ||||    
T  24834 cttgcactaccggaaaatcaccaactcctttctcaccactt 24874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 73 - 307
Target Start/End: Complemental strand, 6152 - 5917
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| |||||||||||||||| || ||| |||| ||||| |||||||  ||||| |||||||| ||| |||||||||||||||||||||||||||| |||    
T  6152 ccacggagaaacactcggtctgataaaccgcttttcaagtaactcttctaactgtttcttcaactcatccaactctgatgcagacatccgatacggtgta 6053  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaact 271  Q
     || ||||||||||||| | | ||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||||    
T  6052 atcgaaataggactcgtgcttggtaccaattcaattgcaaactcaacttccctctccggcggtaactcggtaatatcatctggaaaaacttctggaaact 5953  T
Q  272 cctgcactaccgataaatcaccaacccctttctcac 307  Q
    | ||||||||||  ||||||| | | ||||||||||    
T  5952 cttgcactaccggcaaatcactagctcctttctcac 5917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 78 - 312
Target Start/End: Original strand, 555 - 790
Alignment:
Q  78 gagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaa 177  Q
    |||||||| |||| || || ||||||||||| ||||||||||  ||||| ||||||||||||||||||||||||||||||||| ||||||||| | ||||    
T  555 gagaaacaatcggcctgataaactgcttctctagcaactcttctaactgtttcttcaattcacccaactctgatgcagacatctgatacggcgcaatcaa 654  T
Q  178 aataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgt-ctggaaaacttttggaaactcctgc 276  Q
    |||||||||||||||| |||||||||||||| |||||  ||||||||||||| |||||||||| ||||| |||| | | ||||||| ||||||||| ||     
T  655 aataggactcgttcctggtaccaaatcaatttcaaacacaacttccctctccagcggtaattcagtaatgtcgtccagaaaaacttctggaaactcttgt 754  T
Q  277 actaccgataaatcaccaacccctttctcactactt 312  Q
    ||||||   |||| |||||| |||||||||| ||||    
T  755 actaccagcaaattaccaactcctttctcacaactt 790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 98 - 312
Target Start/End: Complemental strand, 4725 - 4510
Alignment:
Q  98 aactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaataggactcgttcctagta 197  Q
    |||| ||||| |||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||| | || ||||||||||||||||| |||    
T  4725 aactacttcttaagcaactcttctaactacttcttcaattcacccaactctgttgcagacatccgatacggcgcaatcgaaataggactcgttcctggta 4626  T
Q  198 ccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtct-ggaaaacttttggaaactcctgcactaccgataaatcaccaac 296  Q
    |||||||||||||||||| ||||||||||||||||||||| || |||||||| ||| | ||||| |  |||||||| || ||||||   |||||||||||    
T  4625 ccaaatcaattgcaaactcaacttccctctccggcggtaactcagtaatatcatctagaaaaacctccggaaactcttgtactaccagcaaatcaccaac 4526  T
Q  297 ccctttctcactactt 312  Q
     |||||||||| ||||    
T  4525 tcctttctcaccactt 4510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 128 - 312
Target Start/End: Original strand, 51352 - 51537
Alignment:
Q  128 ttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctct 227  Q
    ||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  51352 ttcttcaattcacccaactctgatgcagacatccgatacggcgcaatcgaaataggactcgtgcctggtaccaaatcaattgcaaactcaacttccctct 51451  T
Q  228 ccggcggtaattcggtaatatcgtctg-gaaaacttttggaaactcctgcactaccgataaatcaccaacccctttctcactactt 312  Q
    |||||||||| ||||||||||| || |  |||||||  |||||||| ||||| ||||  || |||||||| |||||||||||||||    
T  51452 ccggcggtaactcggtaatatcatccgaaaaaacttcaggaaactcttgcaccaccggcaattcaccaactcctttctcactactt 51537  T

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Target: scaffold0456 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 116 - 307
Target Start/End: Complemental strand, 7384 - 7192
Alignment:
Q  116 tctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaataggactcgttcctagtaccaaatcaattgcaaact 215  Q
    |||| |||||| |||||||||||||||||||| |||||||||||||||||||||| | || ||||||||||||| ||| | |||||||||||||||||||    
T  7384 tcttccaactgattcttcaattcacccaactccgatgcagacatccgatacggcgcaatcgaaataggactcgtgcctggcaccaaatcaattgcaaact 7285  T
Q  216 taacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcactaccgataaatcaccaacccctttctcac 307  Q
      |||||||||||||||||||| ||||||||||| ||||| ||||| |  |||||||| ||||||||||  ||||||| ||| ||||||||||    
T  7284 ctacttccctctccggcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcactaccggcaaatcactaactcctttctcac 7192  T

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Target: scaffold0456; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 116 - 307
Target Start/End: Complemental strand, 239 - 47
Alignment:
Q  116 tctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaataggactcgttcctagtaccaaatcaattgcaaact 215  Q
    |||| |||||| |||||||||||||||||||| |||||||||||||||||||||| | || ||||||||||||| ||| | ||| |||||||||||||||    
T  239 tcttccaactgattcttcaattcacccaactccgatgcagacatccgatacggcgcaatcgaaataggactcgtgcctggcacctaatcaattgcaaact 140  T
Q  216 taacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcactaccgataaatcaccaacccctttctcac 307  Q
      |||||||||||| ||||||| ||||||||||| ||||| ||||| |  |||||||| ||||||||||  ||||||| ||| ||||||||||    
T  139 ctacttccctctcctgcggtaactcggtaatatcctctggaaaaacctcaggaaactcttgcactaccggcaaatcactaactcctttctcac 47  T

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Target: scaffold0218 (Bit Score: 94; Significance: 7e-46; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 80 - 312
Target Start/End: Complemental strand, 1793 - 1560
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgtagtcaaaa 179  Q
    |||||||| |||||||| |||| |||||||||||||||||  ||||  ||||||||||||||||||||| ||||| ||||||||||||| | | |  |||    
T  1793 gaaacacttggtctaataaactacttctcaagcaactcttctaactatttcttcaattcacccaactctaatgcaaacatccgatacggtgcaattgaaa 1694  T
Q  180 taggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctgg-aaaacttttggaaactcctgcac 278  Q
    |||||||||| ||| ||||||||||||||||||||| ||| ||||||||||| |||||  | |||||||| ||||| |||||||  | |||||| |||||    
T  1693 taggactcgtgcctggtaccaaatcaattgcaaactcaacctccctctccggtggtaacccagtaatatcatctggaaaaacttcagcaaactcttgcac 1594  T
Q  279 taccgataaatcaccaacccctttctcactactt 312  Q
    |||||  ||||||| | | |||||||||| ||||    
T  1593 taccggcaaatcactagctcctttctcaccactt 1560  T

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Target: scaffold0218; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 26810 - 26854
Alignment:
Q  98 aactgcttctcaagcaactctttcaactgcttcttcaattcaccc 142  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||    
T  26810 aactgcttctcgagcaactcttccaactgcttcttcaattcaccc 26854  T

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Target: scaffold0335 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 73 - 232
Target Start/End: Complemental strand, 7088 - 6929
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||| ||||||||||||| || || || |||||||||||||||||||   |||| |||||||||||||||||||||||||| |||||||||||||||| |    
T  7088 ccacggagaaacactcggcctgataaaatgcttctcaagcaactcttctgactgtttcttcaattcacccaactctgatgccgacatccgatacggcgca 6989  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggc 232  Q
     || ||||||||||| ||||| ||||||||||||||||||||| ||||| ||||||||||    
T  6988 atcgaaataggactcattcctggtaccaaatcaattgcaaactcaacttacctctccggc 6929  T

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Target: scaffold0139 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 149 - 307
Target Start/End: Complemental strand, 18119 - 17960
Alignment:
Q  149 gatgcagacatccgatacggcgtagtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatat 248  Q
    |||||||||||||||||||||| | || ||||||||||||| ||| |||||||||||||||| |||| ||||||||||||||||||||| ||||||||||    
T  18119 gatgcagacatccgatacggcgcaatcgaaataggactcgtgcctggtaccaaatcaattgcgaactcaacttccctctccggcggtaactcggtaatat 18020  T
Q  249 cgtctgg-aaaacttttggaaactcctgcactaccgataaatcaccaacccctttctcac 307  Q
    | ||||| |||||||  ||||| || ||||||||||  ||||||| | | ||||||||||    
T  18019 cctctggaaaaacttcgggaaaatcttgcactaccggcaaatcactagctcctttctcac 17960  T

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Target: scaffold0876 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 794 - 699
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacgg 168  Q
    |||| |||| |||||||| || || |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  794 ccacggagatacactcggcctgataaactgcttttcaagcaactcttccaactgcttcttcaattcacccaactctgatgcagacatccgatacgg 699  T

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Target: scaffold0058 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 259
Target Start/End: Original strand, 76881 - 77067
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgatacggcgta 172  Q
    |||||| ||||| ||||  || || ||||| ||||| | ||| |||| ||| ||||||||||  || ||||| || || |||||| | | ||| |||| |    
T  76881 ccacagtgaaaccctcgacctgataaactgtttctctaacaattcttccaattgcttcttcagctcgcccaattccgacgcagacgttcaatatggcgca 76980  T
Q  173 gtcaaaataggactcgttcctagtaccaaatcaattgcaaacttaacttccctctccggcggtaattcggtaatatcgtctggaaaa 259  Q
     ||||||||||||| |||||| | |||||||||||||||||||  | |||||||||  ||||||| |||||||| | || |||||||    
T  76981 atcaaaataggacttgttcctggcaccaaatcaattgcaaactccatttccctctctagcggtaagtcggtaatgtagtttggaaaa 77067  T

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Target: scaffold0476 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 1386 - 1301
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||||||||| |  |||| ||| |||||||| |||| |||||| |||||||||||| ||||||| ||||| ||||| |||||    
T  1386 gaaacactcggtcttacaaacttcttatcaagcaagtcttccaactgattcttcaattcagccaactcagatgctgacatacgata 1301  T

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Target: scaffold0462 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 312
Target Start/End: Original strand, 2325 - 2418
Alignment:
Q  220 ttccctctccggcggtaattcggtaatatcgtctggaaaa-cttttggaaactcctgcactaccgataaatcaccaacccctttctcactactt 312  Q
    |||||||||||  ||||| ||||||||||| ||||||||| |||  |||||||| ||||||| ||  ||||||||||| |||||||||| ||||    
T  2325 ttccctctccgatggtaactcggtaatatcatctggaaaaacttccggaaactcttgcactatcggcaaatcaccaactcctttctcaccactt 2418  T

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Target: scaffold0114 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 165
Target Start/End: Original strand, 39514 - 39606
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||| |||||||| |||||||  |||| ||| |||||||| |||| |||||| |||||||||||| | ||||| ||||| ||||| |||||    
T  39514 ccacagtgaaacactgggtctaacaaacttcttatcaagcaagtcttccaactgtttcttcaattcagctaactcagatgctgacatacgata 39606  T

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Target: scaffold0114; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 22339 - 22424
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| ||| |||||||| |||| |||||| |||||||||||| | ||||| ||||| ||||| |||||    
T  22339 gaaacactgggtctaacaaacttcttatcaagcaagtcttccaactgtttcttcaattcagctaactcagatgctgacatacgata 22424  T

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Target: scaffold0215 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 28336 - 28251
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    ||||||||||||||||  |||| |||||||||||| ||||  ||||| |||||||| ||| | ||||| || |||||||| |||||    
T  28336 gaaacactcggtctaacaaacttcttctcaagcaaatcttctaactgtttcttcaactcagctaactcggaagcagacatacgata 28251  T

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Target: scaffold0080 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 31347 - 31432
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| ||||  ||||| |||||||| ||||| ||||| || |||||||| |||||    
T  31347 gaaacacttggtctaacaaacttcttctcaagcaaatcttctaactgtttcttcaactcacctaactcggaagcagacatacgata 31432  T

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Target: scaffold0080; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 36813 - 36898
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| ||||  ||||| |||||||| ||||| ||||| || |||||||| |||||    
T  36813 gaaacacttggtctaacaaacttcttctcaagcaaatcttctaactgtttcttcaactcacctaactcggaagcagacatacgata 36898  T

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Target: scaffold0055 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 21710 - 21795
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    ||||||||||||||||  |||| |||||||||||| |||| |||||| |||||||| |||   ||||| || |||||||| |||||    
T  21710 gaaacactcggtctaacaaacttcttctcaagcaagtcttccaactgtttcttcaactcagataactcagaagcagacatacgata 21795  T

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Target: scaffold0420 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 165
Target Start/End: Original strand, 8070 - 8162
Alignment:
Q  73 ccacagagaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||| |||||||| |||||||  |||| ||| |||||||| ||||  ||||| |||||||||||| | ||||| ||||| ||||| |||||    
T  8070 ccacagtgaaacactgggtctaacaaacttcttatcaagcaagtcttcaaactgtttcttcaattcaactaactcagatgctgacatacgata 8162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 18324 - 18245
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacat 159  Q
    |||||||| |||||||  |||| ||| |||||||| |||| |||||| |||||||||||| | ||||| ||||| |||||    
T  18324 gaaacactgggtctaacaaacttcttatcaagcaagtcttccaactgtttcttcaattcagctaactcagatgctgacat 18245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 5690 - 5605
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| ||| |||||||| |||| | |||| |||||||||||| | ||||| ||||| ||||| |||||    
T  5690 gaaacactgggtctaacaaacttcttatcaagcaagtcttccgactgtttcttcaattcagctaactcagatgctgacatacgata 5605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 2887 - 2972
Alignment:
Q  80 gaaacactcggtctaatgaactgcttctcaagcaactctttcaactgcttcttcaattcacccaactctgatgcagacatccgata 165  Q
    |||||||| |||||||  |||| |||||||||||| || | |||||| ||||||||||||   ||||| || |||||||| |||||    
T  2887 gaaacacttggtctaacaaacttcttctcaagcaagtcctccaactgtttcttcaattcagataactcggaagcagacatacgata 2972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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