View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1306-Insertion-6 (Length: 180)
Name: NF1306-Insertion-6
Description: NF1306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1306-Insertion-6 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 28280797 - 28280842
Alignment:
| Q |
135 |
aaaccctatattttcctcactcactgtagacttagaggttcctgta |
180 |
Q |
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| T |
28280797 |
aaaccctatattttcctcactcactgtagacttagaggttcctgta |
28280842 |
T |
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