View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13060_low_6 (Length: 443)

Name: NF13060_low_6
Description: NF13060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13060_low_6
NF13060_low_6
[»] chr6 (23 HSPs)
chr6 (184-314)||(9690633-9690764)
chr6 (184-306)||(34147425-34147548)
chr6 (184-306)||(34160041-34160164)
chr6 (184-306)||(15360093-15360216)
chr6 (184-306)||(654141-654264)
chr6 (184-306)||(1345014-1345137)
chr6 (184-306)||(3222631-3222753)
chr6 (184-306)||(5360066-5360189)
chr6 (212-306)||(12390504-12390599)
chr6 (184-310)||(17081049-17081176)
chr6 (184-314)||(21148506-21148636)
chr6 (184-306)||(21982316-21982438)
chr6 (189-306)||(11448950-11449068)
chr6 (191-306)||(10377794-10377911)
chr6 (184-306)||(9208331-9208454)
chr6 (184-306)||(9239054-9239177)
chr6 (184-310)||(28672142-28672269)
chr6 (184-307)||(11007243-11007367)
chr6 (189-310)||(9844013-9844135)
chr6 (184-255)||(14213013-14213084)
chr6 (184-255)||(14504077-14504148)
chr6 (207-305)||(17149474-17149573)
chr6 (322-352)||(21148677-21148707)
[»] chr3 (51 HSPs)
chr3 (184-306)||(35492990-35493113)
chr3 (184-314)||(10190737-10190868)
chr3 (184-314)||(10083814-10083945)
chr3 (184-314)||(49258257-49258388)
chr3 (184-314)||(15566495-15566625)
chr3 (184-310)||(40133444-40133571)
chr3 (184-314)||(25289710-25289840)
chr3 (184-306)||(26174192-26174315)
chr3 (184-306)||(39041847-39041970)
chr3 (184-306)||(52821631-52821753)
chr3 (184-306)||(8456145-8456268)
chr3 (184-306)||(18176882-18177005)
chr3 (184-310)||(21363018-21363145)
chr3 (184-314)||(25379832-25379963)
chr3 (184-306)||(48977467-48977590)
chr3 (184-306)||(51532868-51532991)
chr3 (184-305)||(8097274-8097396)
chr3 (179-314)||(32151495-32151631)
chr3 (184-306)||(45272411-45272534)
chr3 (184-306)||(45529750-45529872)
chr3 (184-306)||(46576427-46576550)
chr3 (187-306)||(50731235-50731352)
chr3 (187-306)||(50781502-50781619)
chr3 (184-306)||(53233906-53234028)
chr3 (184-292)||(30257718-30257826)
chr3 (184-306)||(30807148-30807271)
chr3 (184-284)||(52455644-52455744)
chr3 (184-306)||(34492570-34492693)
chr3 (184-306)||(53424172-53424294)
chr3 (185-312)||(1692907-1693034)
chr3 (184-310)||(8958030-8958158)
chr3 (184-292)||(24165710-24165817)
chr3 (189-314)||(17579135-17579262)
chr3 (179-286)||(24407361-24407468)
chr3 (184-314)||(33398463-33398594)
chr3 (179-257)||(53848424-53848502)
chr3 (184-290)||(54475777-54475883)
chr3 (184-249)||(4048087-4048152)
chr3 (179-306)||(2511287-2511415)
chr3 (204-249)||(4252411-4252456)
chr3 (186-255)||(4462763-4462832)
chr3 (184-249)||(7485526-7485590)
chr3 (184-292)||(25344053-25344160)
chr3 (184-255)||(25017620-25017690)
chr3 (244-306)||(26108371-26108434)
chr3 (204-275)||(55371309-55371380)
chr3 (184-278)||(48104985-48105079)
chr3 (270-310)||(11390677-11390718)
chr3 (322-351)||(26174114-26174143)
chr3 (266-306)||(40940904-40940945)
chr3 (190-246)||(21776556-21776611)
[»] chr7 (51 HSPs)
chr7 (179-306)||(7175852-7175980)
chr7 (189-306)||(7275360-7275478)
chr7 (184-306)||(27009442-27009566)
chr7 (184-306)||(18044190-18044313)
chr7 (184-306)||(22119971-22120094)
chr7 (184-306)||(40542905-40543028)
chr7 (179-310)||(22703565-22703697)
chr7 (184-306)||(2751354-2751477)
chr7 (184-306)||(3851840-3851963)
chr7 (184-306)||(17196945-17197068)
chr7 (184-306)||(21835234-21835357)
chr7 (184-306)||(23092179-23092302)
chr7 (184-306)||(36772298-36772421)
chr7 (184-306)||(654700-654822)
chr7 (189-306)||(23330739-23330857)
chr7 (179-306)||(16374077-16374205)
chr7 (179-314)||(27312227-27312363)
chr7 (184-306)||(11997932-11998055)
chr7 (212-311)||(21373788-21373888)
chr7 (184-306)||(2344382-2344505)
chr7 (204-306)||(17212136-17212239)
chr7 (184-306)||(29861753-29861876)
chr7 (184-310)||(31197669-31197796)
chr7 (184-314)||(32849666-32849797)
chr7 (189-306)||(21217833-21217951)
chr7 (179-306)||(28647052-28647180)
chr7 (184-292)||(42913508-42913616)
chr7 (212-306)||(2103138-2103232)
chr7 (184-310)||(19421310-19421437)
chr7 (184-302)||(21574097-21574216)
chr7 (184-314)||(23012503-23012634)
chr7 (184-306)||(41907509-41907631)
chr7 (184-310)||(28089895-28090025)
chr7 (208-310)||(47541463-47541565)
chr7 (184-249)||(11909949-11910014)
chr7 (184-306)||(22696403-22696527)
chr7 (189-309)||(9769666-9769785)
chr7 (207-306)||(10091271-10091371)
chr7 (179-306)||(27704085-27704212)
chr7 (184-314)||(9683901-9684032)
chr7 (189-292)||(31712902-31713005)
chr7 (189-240)||(36395496-36395547)
chr7 (184-274)||(25333519-25333608)
chr7 (178-306)||(28950954-28951083)
chr7 (266-310)||(42814943-42814988)
chr7 (266-309)||(22643419-22643463)
chr7 (184-306)||(39145647-39145770)
chr7 (184-306)||(35476424-35476547)
chr7 (180-245)||(17279676-17279741)
chr7 (184-256)||(674431-674503)
chr7 (184-292)||(43785294-43785402)
[»] chr8 (42 HSPs)
chr8 (184-306)||(6953003-6953125)
chr8 (179-306)||(4718728-4718856)
chr8 (179-306)||(21603313-21603441)
chr8 (184-306)||(20305991-20306114)
chr8 (184-306)||(21092624-21092747)
chr8 (61-182)||(8953665-8953802)
chr8 (184-306)||(18128596-18128719)
chr8 (184-306)||(32879362-32879485)
chr8 (184-306)||(34237650-34237773)
chr8 (179-306)||(8765516-8765644)
chr8 (184-306)||(3734618-3734741)
chr8 (184-306)||(15259401-15259524)
chr8 (184-314)||(33746957-33747088)
chr8 (184-306)||(39349339-39349462)
chr8 (184-306)||(42328087-42328210)
chr8 (188-314)||(42643117-42643244)
chr8 (184-306)||(2618269-2618392)
chr8 (184-306)||(28193557-28193680)
chr8 (355-425)||(8954057-8954126)
chr8 (179-310)||(4698713-4698845)
chr8 (184-292)||(20470015-20470122)
chr8 (185-292)||(2166795-2166901)
chr8 (204-310)||(28088365-28088472)
chr8 (184-306)||(34610682-34610805)
chr8 (184-277)||(2639406-2639499)
chr8 (184-292)||(19471707-19471816)
chr8 (184-292)||(19542631-19542740)
chr8 (184-292)||(19589956-19590065)
chr8 (184-306)||(27746330-27746453)
chr8 (212-305)||(21667634-21667727)
chr8 (204-306)||(13749138-13749242)
chr8 (184-259)||(7557946-7558021)
chr8 (184-283)||(10292161-10292260)
chr8 (184-310)||(25248428-25248552)
chr8 (189-306)||(34639208-34639325)
chr8 (270-314)||(24018457-24018502)
chr8 (179-248)||(34694565-34694634)
chr8 (184-307)||(1219431-1219555)
chr8 (228-292)||(9047317-9047381)
chr8 (270-309)||(18532187-18532227)
chr8 (270-306)||(26168930-26168966)
chr8 (184-310)||(28908902-28909030)
[»] chr5 (39 HSPs)
chr5 (189-314)||(7085626-7085752)
chr5 (184-306)||(32059435-32059558)
chr5 (184-306)||(34310221-34310344)
chr5 (184-314)||(35425084-35425215)
chr5 (184-306)||(8484656-8484779)
chr5 (184-306)||(27498726-27498849)
chr5 (184-307)||(9659306-9659430)
chr5 (184-306)||(11926496-11926620)
chr5 (184-306)||(4603856-4603979)
chr5 (184-306)||(15641101-15641223)
chr5 (184-306)||(18207286-18207409)
chr5 (184-306)||(19145407-19145529)
chr5 (184-306)||(19456206-19456328)
chr5 (184-306)||(23270517-23270640)
chr5 (184-310)||(30485903-30486030)
chr5 (184-306)||(10399852-10399976)
chr5 (184-306)||(38684287-38684409)
chr5 (189-314)||(21236362-21236488)
chr5 (184-310)||(12398443-12398570)
chr5 (179-256)||(22693065-22693142)
chr5 (238-309)||(15971171-15971243)
chr5 (184-306)||(33709498-33709619)
chr5 (184-306)||(930481-930602)
chr5 (184-278)||(22392796-22392890)
chr5 (184-306)||(25750608-25750727)
chr5 (184-292)||(34049905-34050013)
chr5 (189-292)||(5049231-5049333)
chr5 (184-306)||(6014275-6014398)
chr5 (184-310)||(24158161-24158288)
chr5 (252-306)||(25587011-25587066)
chr5 (185-306)||(27487550-27487673)
chr5 (184-306)||(31287941-31288064)
chr5 (184-254)||(37495186-37495256)
chr5 (184-249)||(41351099-41351164)
chr5 (184-256)||(38630974-38631046)
chr5 (204-255)||(5067392-5067443)
chr5 (179-242)||(25548524-25548587)
chr5 (204-306)||(42193564-42193665)
chr5 (184-240)||(10631284-10631340)
[»] chr2 (46 HSPs)
chr2 (184-292)||(11941205-11941313)
chr2 (184-306)||(30466825-30466948)
chr2 (184-306)||(35171879-35172002)
chr2 (184-306)||(44946048-44946171)
chr2 (184-306)||(15038038-15038161)
chr2 (184-306)||(18708556-18708679)
chr2 (184-306)||(33827568-33827691)
chr2 (189-310)||(27269344-27269466)
chr2 (189-310)||(41314067-41314188)
chr2 (184-306)||(714120-714243)
chr2 (184-306)||(8192347-8192469)
chr2 (184-306)||(19174842-19174964)
chr2 (184-305)||(24196084-24196204)
chr2 (184-306)||(28668952-28669075)
chr2 (179-310)||(2140476-2140605)
chr2 (184-305)||(34516409-34516530)
chr2 (189-306)||(36390569-36390686)
chr2 (184-312)||(19849906-19850034)
chr2 (184-310)||(5394092-5394219)
chr2 (180-310)||(29698222-29698352)
chr2 (204-310)||(36242327-36242434)
chr2 (184-259)||(44929841-44929916)
chr2 (189-306)||(1191592-1191710)
chr2 (186-244)||(3675642-3675700)
chr2 (184-266)||(18692080-18692162)
chr2 (184-302)||(19054108-19054228)
chr2 (184-256)||(25293289-25293361)
chr2 (184-255)||(4852660-4852731)
chr2 (184-306)||(17324845-17324966)
chr2 (189-259)||(6714295-6714365)
chr2 (184-249)||(14486962-14487027)
chr2 (184-306)||(3943819-3943942)
chr2 (184-314)||(12543215-12543345)
chr2 (189-256)||(31778161-31778228)
chr2 (184-305)||(19605841-19605962)
chr2 (245-306)||(27290667-27290729)
chr2 (179-249)||(39957895-39957965)
chr2 (266-310)||(5608111-5608156)
chr2 (184-249)||(13747495-13747560)
chr2 (212-292)||(4769260-4769340)
chr2 (177-249)||(8024659-8024730)
chr2 (271-306)||(10582072-10582108)
chr2 (278-306)||(28194223-28194251)
chr2 (278-306)||(40591262-40591290)
chr2 (184-292)||(41329937-41330044)
chr2 (184-256)||(43374325-43374397)
[»] scaffold0026 (2 HSPs)
scaffold0026 (184-306)||(97361-97484)
scaffold0026 (184-249)||(5968-6033)
[»] chr4 (43 HSPs)
chr4 (184-306)||(34844753-34844876)
chr4 (184-306)||(45787699-45787822)
chr4 (189-306)||(40058852-40058970)
chr4 (184-312)||(32990508-32990637)
chr4 (184-306)||(5609197-5609320)
chr4 (184-306)||(32986276-32986399)
chr4 (184-306)||(34723878-34724001)
chr4 (184-305)||(19660527-19660649)
chr4 (190-306)||(52983698-52983815)
chr4 (191-306)||(20077986-20078102)
chr4 (184-306)||(20566429-20566552)
chr4 (184-306)||(27528790-27528913)
chr4 (184-306)||(33696274-33696397)
chr4 (212-306)||(36131533-36131628)
chr4 (184-305)||(44343594-44343716)
chr4 (184-306)||(25852293-25852417)
chr4 (184-306)||(54127337-54127460)
chr4 (189-306)||(46714472-46714590)
chr4 (184-306)||(35229246-35229370)
chr4 (265-309)||(39288935-39288979)
chr4 (204-306)||(9517656-9517759)
chr4 (184-306)||(32942449-32942572)
chr4 (184-306)||(7391960-7392081)
chr4 (184-306)||(25969498-25969618)
chr4 (184-278)||(51595130-51595224)
chr4 (189-312)||(21387487-21387609)
chr4 (189-249)||(23639761-23639821)
chr4 (189-249)||(23645419-23645479)
chr4 (184-314)||(13550279-13550410)
chr4 (184-306)||(55961749-55961871)
chr4 (180-249)||(52494625-52494694)
chr4 (184-292)||(12500054-12500161)
chr4 (270-309)||(18875597-18875637)
chr4 (239-306)||(35674791-35674859)
chr4 (184-256)||(43719082-43719154)
chr4 (212-306)||(13873318-13873413)
chr4 (322-352)||(19660699-19660729)
chr4 (184-253)||(7093504-7093573)
chr4 (225-313)||(13716486-13716575)
chr4 (266-306)||(29875852-29875893)
chr4 (184-249)||(33289191-33289256)
chr4 (179-255)||(20527024-20527100)
chr4 (239-306)||(33992705-33992773)
[»] chr1 (48 HSPs)
chr1 (185-306)||(24122102-24122224)
chr1 (170-314)||(17935840-17935985)
chr1 (179-306)||(4621227-4621355)
chr1 (179-305)||(7766717-7766844)
chr1 (184-306)||(24674472-24674595)
chr1 (208-314)||(25237008-25237115)
chr1 (189-306)||(1486497-1486617)
chr1 (184-310)||(1378973-1379100)
chr1 (184-292)||(26820281-26820389)
chr1 (184-306)||(46607889-46608012)
chr1 (184-306)||(15059397-15059520)
chr1 (184-306)||(32729624-32729746)
chr1 (191-306)||(8077726-8077841)
chr1 (228-314)||(1138650-1138737)
chr1 (184-306)||(30677255-30677378)
chr1 (184-286)||(26513143-26513244)
chr1 (184-289)||(34778436-34778541)
chr1 (179-306)||(45331611-45331740)
chr1 (184-306)||(7578488-7578611)
chr1 (184-310)||(8254747-8254874)
chr1 (204-306)||(16899582-16899685)
chr1 (184-306)||(36155883-36156006)
chr1 (184-306)||(7197242-7197364)
chr1 (184-306)||(27454859-27454984)
chr1 (184-294)||(40802064-40802173)
chr1 (184-306)||(23734195-23734319)
chr1 (184-306)||(23741387-23741511)
chr1 (216-306)||(168280-168371)
chr1 (212-314)||(8779759-8779862)
chr1 (189-256)||(27159215-27159282)
chr1 (184-259)||(35138115-35138190)
chr1 (189-306)||(9500355-9500473)
chr1 (184-282)||(22909975-22910073)
chr1 (218-291)||(12876965-12877038)
chr1 (180-249)||(23041659-23041728)
chr1 (184-249)||(37351448-37351513)
chr1 (184-307)||(33905505-33905629)
chr1 (282-313)||(809294-809325)
chr1 (184-310)||(9926141-9926268)
chr1 (184-235)||(31162901-31162952)
chr1 (184-306)||(45859038-45859161)
chr1 (322-352)||(168201-168231)
chr1 (189-306)||(16539687-16539804)
chr1 (276-306)||(19034474-19034504)
chr1 (184-304)||(32930830-32930951)
chr1 (270-306)||(37351542-37351579)
chr1 (266-314)||(40145963-40146012)
chr1 (179-235)||(14603947-14604003)
[»] scaffold0576 (1 HSPs)
scaffold0576 (184-306)||(5077-5200)
[»] scaffold0217 (1 HSPs)
scaffold0217 (184-306)||(7304-7427)
[»] scaffold0070 (1 HSPs)
scaffold0070 (184-306)||(40404-40526)
[»] scaffold0019 (1 HSPs)
scaffold0019 (184-306)||(161888-162011)
[»] scaffold1175 (1 HSPs)
scaffold1175 (184-292)||(2421-2529)
[»] scaffold0623 (1 HSPs)
scaffold0623 (184-306)||(1052-1174)
[»] scaffold0366 (2 HSPs)
scaffold0366 (184-306)||(9295-9417)
scaffold0366 (215-306)||(12027-12118)
[»] scaffold0051 (1 HSPs)
scaffold0051 (184-306)||(52866-52989)
[»] scaffold0328 (1 HSPs)
scaffold0328 (184-306)||(13042-13162)
[»] scaffold0160 (1 HSPs)
scaffold0160 (184-303)||(29138-29257)
[»] scaffold0102 (1 HSPs)
scaffold0102 (184-306)||(39171-39294)
[»] scaffold0049 (1 HSPs)
scaffold0049 (184-279)||(66861-66956)
[»] scaffold0016 (1 HSPs)
scaffold0016 (184-306)||(32367-32489)
[»] scaffold0459 (1 HSPs)
scaffold0459 (184-306)||(10690-10811)
[»] scaffold0157 (1 HSPs)
scaffold0157 (184-292)||(20316-20423)
[»] scaffold0199 (1 HSPs)
scaffold0199 (184-249)||(8446-8511)
[»] scaffold0068 (1 HSPs)
scaffold0068 (207-292)||(41662-41747)


Alignment Details
Target: chr6 (Bit Score: 72; Significance: 1e-32; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 9690633 - 9690764
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||||||| ||||||||||| |||||||||||| |||||||||||||  | ||| || |||  ||| ||||||||||||||    
T  9690633 tttttaaaactcggtatccgatccaagaatcgactaatccgagaggaccaatcccaccgtccacttgtgagggccccgtttaaagccagagcaagctctg 9690732  T
Q  284 tatggactt-gcccaccgaaattgacactaga 314  Q
    ||||||||| ||||||||||||||||||||||    
T  9690733 tatggacttagcccaccgaaattgacactaga 9690764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 34147548 - 34147425
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  34147548 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagctctg 34147449  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  34147448 tatggacttagcccaccgaaattg 34147425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 34160164 - 34160041
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  34160164 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagctctg 34160065  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  34160064 tatggacttagcccaccgaaattg 34160041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 15360093 - 15360216
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| ||| || |||||| || |||  ||| ||||||||||||||    
T  15360093 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaagctctg 15360192  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  15360193 tatggacttagcccaccgaaattg 15360216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 654141 - 654264
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||  ||||||||||| ||| |||||||| |||||| |||||| |||| | || |||  ||| ||||||||||||||    
T  654141 ttttaaaaactcggtatccgatccaataatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagcaagctctg 654240  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  654241 tatggacttagcccaccgaaattg 654264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 1345137 - 1345014
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| |||||||||||  || |||||||| ||||||||||||| |||||| || |||  ||| ||||||||||| ||    
T  1345137 ttttgaaaactcggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgtccacttgcggggggcccgtttaaagccagagcaagctttg 1345038  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| |||||| |||||||    
T  1345037 tatggacttagcccactgaaattg 1345014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 3222631 - 3222753
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| | |||| || |||  ||| ||||||||||||||    
T  3222631 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgc-ggggccccgtttaaagacagagcaagctctg 3222729  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  3222730 tatggacttagcccaccgaaattg 3222753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 5360066 - 5360189
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||| ||| ||||||||||  ||| |||||||| |||||| ||||||  |||||| | |||  ||||||||||||||||||    
T  5360066 ttttcaaaactcggtatccgatctaagaatcgactaattcgaggggaccaatcccaccgcccacttgtgggggttccgtttaaagtcagagcaagctctg 5360165  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  5360166 tatggacttagcccaccgaaattg 5360189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 12390599 - 12390504
Alignment:
Q  212 atcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaaattg 306  Q
    ||||||||||| ||| |||||||| |||||| |||||| |||||| ||||||  ||| ||||||||||||||||||||||| ||||||||||||||    
T  12390599 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatggacttagcccaccgaaattg 12390504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 310
Target Start/End: Original strand, 17081049 - 17081176
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||||| ||||||| | | ||| ||  ||| |||||||| |||||| |||||| |||||| ||  ||  ||||||||||||||||||    
T  17081049 ttttgaaaactcggtattcgatccaagaaacaacttattcgaggggaccaatcccaccgcccacttgcgggggccccatttaaagtcagagcaagctctg 17081148  T
Q  284 tatggactt-gcccaccgaaattgacac 310  Q
    ||||||||| ||||||||||||||||||    
T  17081149 tatggacttagcccaccgaaattgacac 17081176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 21148506 - 21148636
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | || |||| ||||||||||| ||| |||||||| |||||| |||||| | |||| || |||  ||||||||||||||||||    
T  21148506 ttttgaaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgc-ggggccccgtttaaagtcagagcaagctctg 21148604  T
Q  284 tatggactt-gcccaccgaaattgacactaga 314  Q
    ||||||||| ||||| |||||||| |||||||    
T  21148605 tatggacttagcccatcgaaattggcactaga 21148636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 21982316 - 21982438
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  21982316 ttttgaaaactcggtatccgatccaagaatcgactaatccgag-ggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 21982414  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| |||||| |||||||    
T  21982415 tatggacttagcccactgaaattg 21982438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 189 - 306
Target Start/End: Complemental strand, 11449068 - 11448950
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatgg 288  Q
    |||||||| ||| | || |||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| |||||||||||||||||||    
T  11449068 aaaactcgatatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgg 11448969  T
Q  289 actt-gcccaccgaaattg 306  Q
    |||| ||||||||||||||    
T  11448968 acttagcccaccgaaattg 11448950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 306
Target Start/End: Complemental strand, 10377911 - 10377794
Alignment:
Q  191 aactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccactt-acgggggtcctgttataagtcagagc-aagctctgtatgg 288  Q
    |||||||||| ||||||||||| |||||| || ||| |||||||| |||||| ||||||   ||||| || ||| ||||||||||| ||||| |||||||    
T  10377911 aactcggtatccaatccaaggaccgactactccgaggggaccaatgccaccgcccacttgtggggggccccgttttaagtcagagcaaagctatgtatgg 10377812  T
Q  289 acttgcccaccgaaattg 306  Q
    ||||||||||||||||||    
T  10377811 acttgcccaccgaaattg 10377794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 9208454 - 9208331
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaa-gctct 282  Q
    ||||||||||||||||||  ||||||| |||||||| || |||  ||||||| |||||| |||||| |||||| ||  ||  ||| || ||||| |||||    
T  9208454 tttttaaaactcggtatttgatccaagaatcgactattctgaggagaccaatcccaccgcccacttgcgggggccccatttaaagccaaagcaaggctct 9208355  T
Q  283 gtatggacttgcccaccgaaattg 306  Q
    ||||||||||||||||||||||||    
T  9208354 gtatggacttgcccaccgaaattg 9208331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 9239177 - 9239054
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||| ||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| ||  ||  ||| || ||||||||||     
T  9239177 ttttttaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagccaaagcaagctcta 9239078  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    |||||||||  |||||||||||||    
T  9239077 tatggacttaacccaccgaaattg 9239054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 310
Target Start/End: Complemental strand, 28672269 - 28672142
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| ||||||||||||   ||||||| ||||||||||| ||| |||||||| |||||| |||||| || ||| || |||  ||| || | |||||||||    
T  28672269 ttttaaaaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgaggggcccgtttaaagccaaaacaagctctg 28672170  T
Q  284 tatggactt-gcccaccgaaattgacac 310  Q
    ||||||||| ||||||| ||||||||||    
T  28672169 tatggacttagcccaccaaaattgacac 28672142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 307
Target Start/End: Complemental strand, 11007367 - 11007243
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||| ||||| | ||| ||| ||||||||||| ||| || ||||| |||||| |||||| |||||| || | |  |||  |||||||||| ||    
T  11007367 ttttgaaaactaggtatccgatcaaagaatcgactaatccgagggggccaatcccaccgcccacttgcgggggccccgcttaaagctagagcaagctttg 11007268  T
Q  284 tatggactt-gcccaccgaaattga 307  Q
    ||||||||| |||||||||||||||    
T  11007267 tatggacttagcccaccgaaattga 11007243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 310
Target Start/End: Complemental strand, 9844135 - 9844013
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatgg 288  Q
    |||||||| ||| | ||||||| ||||||||||| ||  ||||||||  ||||| ||||||  ||||| || |||  ||| |||| ||||||||||||||    
T  9844135 aaaactcgatatccgatccaagaatcgactaatccgaagggaccaatctcaccgcccacttgagggggccccgtttaaagccagaacaagctctgtatgg 9844036  T
Q  289 actt-gcccaccgaaattgacac 310  Q
    ||||  |||||| ||||||||||    
T  9844035 acttaacccaccaaaattgacac 9844013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 14213084 - 14213013
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggg 255  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||  |||||| |||||    
T  14213084 ttttgaaaactcggtatccgatccaagaatcgactaatccgagtggaccaatcccaccacccacttgcgggg 14213013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 14504077 - 14504148
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggg 255  Q
    |||| |||||||||||| | || |||||||||||||||  ||||||| |||| |||||| |||||| |||||    
T  14504077 ttttaaaaactcggtatccgatacaaggatcgactaattcgagaggatcaatcccaccgcccacttgcgggg 14504148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 305
Target Start/End: Original strand, 17149474 - 17149573
Alignment:
Q  207 caaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag-ctctgtatggacttgcccaccgaaatt 305  Q
    |||||| ||||||||  ||| |||||||| ||||||| ||||| |||||| ||  ||  ||| || |||||| ||||||||||||||||| |||||||||    
T  17149474 caaggaccgactaattcgaggggaccaatcccaccgttcacttgcgggggccccatttaaagccaaagcaaggctctgtatggacttgccaaccgaaatt 17149573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 352
Target Start/End: Original strand, 21148677 - 21148707
Alignment:
Q  322 atcccaagccaaccactaggccaactccaaa 352  Q
    |||||||||||||||||||||||||||||||    
T  21148677 atcccaagccaaccactaggccaactccaaa 21148707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 35493113 - 35492990
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||||||||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  35493113 tttttaaaactcggtattcaatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 35493014  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  35493013 tatggacttagcccaccgaaattg 35492990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 10190737 - 10190868
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| ||||||||||||| |||||| || |||  ||| ||||||||||||||    
T  10190737 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccagagcaagctctg 10190836  T
Q  284 tatggactt-gcccaccgaaattgacactaga 314  Q
    ||||||||| |||||||||||||| |||||||    
T  10190837 tatggacttagcccaccgaaattggcactaga 10190868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 10083814 - 10083945
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||||||||||  ||||| || |||  ||| ||||||||||||||    
T  10083814 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgtgggggccccgtttaaagccagagcaagctctg 10083913  T
Q  284 tatggactt-gcccaccgaaattgacactaga 314  Q
    ||||||||| |||||||||||||| |||||||    
T  10083914 tatggacttagcccaccgaaattggcactaga 10083945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 49258257 - 49258388
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| ||||||  ||||| || |||  ||| ||||||||||||||    
T  49258257 tttttaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccagagcaagctctg 49258356  T
Q  284 tatggactt-gcccaccgaaattgacactaga 314  Q
    ||||||||| |||||||||||||| |||||||    
T  49258357 tatggacttagcccaccgaaattggcactaga 49258388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 15566495 - 15566625
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  15566495 ttttgaaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcggggg-cccgtttaaagccagagcaagctctg 15566593  T
Q  284 tatggactt-gcccaccgaaattgacactaga 314  Q
    ||||||||| |||||||||||||| |||||||    
T  15566594 tatggacttagcccaccgaaattggcactaga 15566625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 310
Target Start/End: Original strand, 40133444 - 40133571
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||  ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  40133444 ttttgaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 40133543  T
Q  284 tatggactt-gcccaccgaaattgacac 310  Q
    ||||||||| ||||||||||||||||||    
T  40133544 tatggacttagcccaccgaaattgacac 40133571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 25289710 - 25289840
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||  ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  25289710 ttttgaaaactcggtatccgatccaagaatcgactaattcgag-ggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 25289808  T
Q  284 tatggactt-gcccaccgaaattgacactaga 314  Q
    ||||||||| |||||||||||||| |||||||    
T  25289809 tatggacttagcccaccgaaattggcactaga 25289840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 26174315 - 26174192
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| ||| ||  ||| ||||||||||||||    
T  26174315 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctatttaaagccagagcaagctctg 26174216  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    |||||||||  |||||||||||||    
T  26174215 tatggacttaacccaccgaaattg 26174192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 39041847 - 39041970
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||  |||||| |||||| || |||  ||| ||||||||||||||    
T  39041847 tttttaaaactcggtatccgatccaagaatcgactaatccgagtggaccaatcccaccacccacttgcgggggccccgtttaaagccagagcaagctctg 39041946  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
     |||||||| ||||||||||||||    
T  39041947 catggacttagcccaccgaaattg 39041970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 52821631 - 52821753
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||||| |||| || |||  ||| ||||||||||||||    
T  52821631 tttttaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttac-ggggccccgtttaaagccagagcaagctctg 52821729  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| || |||||||||||    
T  52821730 tatggacttagctcaccgaaattg 52821753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 8456145 - 8456268
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | || |||| ||||||||||| ||| |||||||| |||| | |||||| |||||| || |||  ||| ||||||||||||||    
T  8456145 ttttgaaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccactgcccacttgcgggggccccgtttaaagccagagcaagctctg 8456244  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  8456245 tatggacttagcccaccgaaattg 8456268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 18176882 - 18177005
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||||||||||| |||| | ||||||| ||||||||||| ||  |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  18176882 tttttaaaactctgtatccgatccaagaatcgactaatccgatgggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 18176981  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| | ||||||||||||    
T  18176982 tatggacttagtccaccgaaattg 18177005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 310
Target Start/End: Complemental strand, 21363145 - 21363018
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||||||| ||||| ||||| ||| | |||||| |||||| |||||| ||||||  | |||  ||| ||||||||||||||    
T  21363145 tttttaaaactcggtatccgatccaagaatcgattaatccgagggaaccaatcccaccgcccacttgcgggggctccgtttaaagccagagcaagctctg 21363046  T
Q  284 tatggactt-gcccaccgaaattgacac 310  Q
    ||||||||| ||| ||||||||||||||    
T  21363045 tatggacttagcctaccgaaattgacac 21363018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 25379963 - 25379832
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||| |||||| |||| | ||||||| ||||||||||| ||| |||||||| |||||| || ||| |||||| || |||  ||| ||||||||||||||    
T  25379963 ttttttaaactcagtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccgcttgcgggggccccgtttaaagccagagcaagctctg 25379864  T
Q  284 tatggactt-gcccaccgaaattgacactaga 314  Q
    ||||||||| |||| ||||||||| |||||||    
T  25379863 tatggacttagccctccgaaattggcactaga 25379832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 48977590 - 48977467
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||||| ||||||||| ||| |||||||| |||||| |||||| | |||| || |||  ||| ||||||||||||||    
T  48977590 ttttgaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcaggggccccgtttaaagccagagcaagctctg 48977491  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    |||||||||  |||||||||||||    
T  48977490 tatggacttaacccaccgaaattg 48977467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 51532991 - 51532868
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| ||||||||||||||    |||| | ||||||||| ||| |||||||| ||||||||||||| |||||||||  ||  |||| |||||||||||||    
T  51532991 ttttgaaaactcggtattcggatcaagaaccgactaatctgaggggaccaatcccaccgtccacttgcgggggtcccatttaaagttagagcaagctctg 51532892  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  51532891 tatggacttagcccaccgaaattg 51532868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 184 - 305
Target Start/End: Original strand, 8097274 - 8097396
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||| ||||||    
T  8097274 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcatgctctg 8097373  T
Q  284 tatggactt-gcccaccgaaatt 305  Q
    ||||||||| ||||| |||||||    
T  8097374 tatggacttagcccatcgaaatt 8097396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 314
Target Start/End: Complemental strand, 32151631 - 32151495
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag 278  Q
    |||| |||| |||||||||||| | ||||||| ||||||||||  ||| ||||||||  ||||| |||||| |||||| || |||  ||| |||||||||    
T  32151631 attttttttaaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcgggggccccgtttaaagccagagcaag 32151532  T
Q  279 ctctgtatggactt-gcccaccgaaattgacactaga 314  Q
    |||||||||  ||| |||||||||||||| |||||||    
T  32151531 ctctgtatgagcttagcccaccgaaattggcactaga 32151495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 45272411 - 45272534
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | |||||||  || ||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| |||||||||||| |    
T  45272411 ttttgaaaactcggtatccgatccaagagtcaactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctccg 45272510  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  45272511 tatggacttagcccaccgaaattg 45272534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 45529750 - 45529872
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||| ||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  45529750 ttttgaaaactcggtatccgatc-aagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagctctg 45529848  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||| ||||||||    
T  45529849 tatggacttagcccatcgaaattg 45529872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 46576550 - 46576427
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| |||||||||||  || |||||||| | |||| |||||| |||||| || |||  ||| ||||||||||||||    
T  46576550 ttttgaaaactcggtatccgatccaagaatcgactaatccaaggggaccaatccgaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 46576451  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| |||||| |||||||    
T  46576450 tatggacttagcccactgaaattg 46576427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 187 - 306
Target Start/End: Original strand, 50731235 - 50731352
Alignment:
Q  187 ttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtat 286  Q
    |||||||||||||| | ||||||||||||||||||| ||| |||||||| |||||| ||||||  | ||| ||  ||||||||||||||  ||||| |||    
T  50731235 ttaaaactcggtatccgatccaaggatcgactaatctgaggggaccaatcccaccgcccacttgtgtggg-ccccttataagtcagagc-tgctctatat 50731332  T
Q  287 ggacttgcccaccgaaattg 306  Q
    ||||||| ||||||||||||    
T  50731333 ggacttgtccaccgaaattg 50731352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 187 - 306
Target Start/End: Complemental strand, 50781619 - 50781502
Alignment:
Q  187 ttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtat 286  Q
    |||||||||||||| | ||||||||||||||||||| ||| |||||||| |||||| ||||||  | ||| ||  ||||||||||||||  ||||| |||    
T  50781619 ttaaaactcggtatccgatccaaggatcgactaatctgaggggaccaatcccaccgcccacttgtgtggg-ccccttataagtcagagc-tgctctatat 50781522  T
Q  287 ggacttgcccaccgaaattg 306  Q
    ||||||| ||||||||||||    
T  50781521 ggacttgtccaccgaaattg 50781502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 53233906 - 53234028
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||| ||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||   || ||||||||||||||    
T  53233906 ttttgaaaactcggtatccgatc-aagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttagagccagagcaagctctg 53234004  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  53234005 tatggacttagcccaccgaaattg 53234028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 292
Target Start/End: Complemental strand, 30257826 - 30257718
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||| ||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| ||  ||  ||| ||||||||||||||    
T  30257826 ttttgaaaattcggtatccgatccaagaatcgactaatccgaggggaccaatgccaccgcccacttgcgggggccccatttaaagccagagcaagctctg 30257727  T
Q  284 tatggactt 292  Q
    |||||||||    
T  30257726 tatggactt 30257718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 30807148 - 30807271
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttac-gggggtcctgttataagtcagagcaagctct 282  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| | |||| |||||| | ||||| || |||  ||| |||||||||||||    
T  30807148 ttttgaaaactcggtatccgatccaagaatcgactaatccgag-ggaccaatcctaccgcccacttgcggggggccccgtttaaagccagagcaagctct 30807246  T
Q  283 gtatggactt-gcccaccgaaattg 306  Q
    |||||||||| ||||||||||||||    
T  30807247 gtatggacttagcccaccgaaattg 30807271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 284
Target Start/End: Original strand, 52455644 - 52455744
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| ||||||||| ||||||||||| ||| |||||||| |||||   ||||| |||||| || |||  ||||||||||||||||||    
T  52455644 ttttgaaaactcggtatccaatccaagaatcgactaatccgaggggaccaatcccaccagtcacttgcgggggccccgtttaaagtcagagcaagctctg 52455743  T
Q  284 t 284  Q
    |    
T  52455744 t 52455744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 34492570 - 34492693
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| ||||||||||||   ||||||| ||| ||||||| ||  |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  34492570 ttttaaaaactcggtatcagatccaagaatcaactaatctgaatggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 34492669  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||| ||||||||    
T  34492670 tatggacttagcccaacgaaattg 34492693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 53424172 - 53424294
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| ||||||  ||||| |||||| || |||  ||| || ||||| |||||    
T  53424172 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcggggg-cccgtttaaagccatagcaaactctg 53424270  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  53424271 tatggacttagcccaccgaaattg 53424294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 312
Target Start/End: Complemental strand, 1693034 - 1692907
Alignment:
Q  185 ttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgt 284  Q
    |||||||||||||||| | || |||| ||||||||||| ||| || | ||| |||||| |||||| |||||| |||||   ||| ||||||||| |||||    
T  1693034 ttttaaaactcggtatccgattcaagaatcgactaatctgagggggcaaatcccaccgcccacttgcggggg-cctgtctaaagccagagcaagttctgt 1692936  T
Q  285 atggactt-gcccaccgaaattgacacta 312  Q
    || ||||| | ||||||||||||||||||    
T  1692935 atagacttagtccaccgaaattgacacta 1692907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 310
Target Start/End: Original strand, 8958030 - 8958158
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttat-aagtcagagcaagctct 282  Q
    |||| ||||||||||||   ||||||| ||||| ||||||||| |||||||| |||||| |||||| |||||| ||  || | |||  |||||||||| |    
T  8958030 ttttgaaaactcggtatctgatccaagaatcgattaatcagaggggaccaatcccaccgcccacttgcgggggccccattttaaagctagagcaagcttt 8958129  T
Q  283 gtatggactt-gcccaccgaaattgacac 310  Q
    |||||||||| ||||||| ||||||||||    
T  8958130 gtatggacttagcccaccaaaattgacac 8958158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 292
Target Start/End: Original strand, 24165710 - 24165817
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| ||| |||| |||||| |||||| | |||| || |||  ||| ||||||||||||||    
T  24165710 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaacaatcccaccgcccacttgc-ggggccccgtttaaagccagagcaagctctg 24165808  T
Q  284 tatggactt 292  Q
    |||||||||    
T  24165809 tatggactt 24165817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 17579135 - 17579262
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgg-gggtcctgttataagtcagagcaagctctgtatg 287  Q
    |||||||| ||||| ||||||  ||||||||||| ||| ||||||||  ||||| |||||| ||| |||||| |||  |||  | |||||||||||||||    
T  17579135 aaaactcgatattcgatccaaaaatcgactaatctgaggggaccaatctcaccgcccacttgcggagggtcccgtttaaagctaaagcaagctctgtatg 17579234  T
Q  288 gactt-gcccaccgaaattgacactaga 314  Q
    ||||| ||||||| ||||| ||||||||    
T  17579235 gacttagcccaccaaaattaacactaga 17579262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 24407468 - 24407361
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag 278  Q
    |||| ||||||||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| ||  || || |||  ||||||||||||     
T  24407468 atttttttttaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgatggccccgtttaaagtcagagcaaa 24407369  T
Q  279 ctctgtat 286  Q
     |||||||    
T  24407368 ttctgtat 24407361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 33398463 - 33398594
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||| ||||||| | ||||||| ||||||||||  ||| | |||||| |||||| |||||| |||||| || |||  |||  |||||||||||||    
T  33398463 tttttaaaattcggtatccgatccaagaatcgactaattcgagggaaccaatcccaccgcccacttgcgggggccccgtttaaagctagagcaagctctg 33398562  T
Q  284 tatggac-ttgcccaccgaaattgacactaga 314  Q
    ||||||| |  |||||| |||||| |||||||    
T  33398563 tatggacataacccaccaaaattggcactaga 33398594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 179 - 257
Target Start/End: Original strand, 53848424 - 53848502
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggt 257  Q
    |||| |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||||    
T  53848424 attttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggt 53848502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 184 - 290
Target Start/End: Complemental strand, 54475883 - 54475777
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||||||||||||||||   ||||||| |||||||||||  || |||||||| |||||| |||||| ||| || || |||  ||| || |||||||||||    
T  54475883 tttttaaaactcggtatctgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttgcggtggccccgtttaaagccaaagcaagctctg 54475784  T
Q  284 tatggac 290  Q
    |||||||    
T  54475783 tatggac 54475777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 4048152 - 4048087
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccactt 249  Q
    ||||||||||||||||| | ||||||| ||| ||||||| ||| |||||||| |||||||||||||    
T  4048152 tttttaaaactcggtatccgatccaagaatcaactaatccgaggggaccaatcccaccgtccactt 4048087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 306
Target Start/End: Original strand, 2511287 - 2511415
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag 278  Q
    |||| |||| |||||| ||||| | || |||| ||| ||||||  |||  ||||||| |||||| |||||| ||| ||||| |||  |||||||||| ||    
T  2511287 attttttttgaaaacttggtatccgattcaagaatctactaattcgaggagaccaatcccaccgcccacttgcggaggtcccgtttaaagtcagagcgag 2511386  T
Q  279 ctctgtatggactt-gcccaccgaaattg 306  Q
    ||||||||| |||| ||||||||||||||    
T  2511387 ctctgtatgaacttagcccaccgaaattg 2511415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 249
Target Start/End: Original strand, 4252411 - 4252456
Alignment:
Q  204 atccaaggatcgactaatcagagaggaccaattccaccgtccactt 249  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||||    
T  4252411 atccaaggatcgactaatccgaggggaccaatcccaccgtccactt 4252456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 4462832 - 4462763
Alignment:
Q  186 tttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggg 255  Q
    ||||||||||||||| ||||||||| ||  ||||||| ||| ||| |||| ||||||||||||| |||||    
T  4462832 tttaaaactcggtatccaatccaagaataaactaatccgagtggatcaatcccaccgtccacttgcgggg 4462763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 7485526 - 7485590
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccactt 249  Q
    ||||||||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| ||||||    
T  7485526 tttttaaaactcggtatccgatccaagaatcgactaatccgag-ggaccaatcccaccggccactt 7485590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 292
Target Start/End: Original strand, 25344053 - 25344160
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||||| ||| ||| ||||||||||| ||| | |||||| ||| || |||||  |||||| || |||  ||| |||||||| |||||    
T  25344053 ttttgaaaactcggtattcgatctaagaatcgactaatccgag-gaaccaatcccatcgcccactagcgggggccccgtttaaagccagagcaaactctg 25344151  T
Q  284 tatggactt 292  Q
    |||||||||    
T  25344152 tatggactt 25344160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 25017690 - 25017620
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggg 255  Q
    ||||||||||||||||||| ||||||| |||||||||||  || | |||||| |||||| |||||| |||||    
T  25017690 tttttaaaactcggtattcgatccaagaatcgactaatccaag-gaaccaatcccaccgcccacttgcgggg 25017620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 306
Target Start/End: Complemental strand, 26108434 - 26108371
Alignment:
Q  244 ccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaaattg 306  Q
    |||||| |||||| || |||  ||| ||||||||||||||||||||||| ||||||||||||||    
T  26108434 ccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattg 26108371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 275
Target Start/End: Original strand, 55371309 - 55371380
Alignment:
Q  204 atccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagc 275  Q
    ||||||||||||||||||| ||| |||||||| |||||| |||||| || ||| || ||| |||| ||||||    
T  55371309 atccaaggatcgactaatccgaggggaccaatcccaccgcccacttgcgagggccccgttttaagccagagc 55371380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 48105079 - 48104985
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag 278  Q
    ||||| ||||||||||| | ||||||| ||||||||||| ||  ||||||||  ||||| ||||||  ||||| ||||||  ||| |||||||||    
T  48105079 ttttttaaactcggtatccgatccaagaatcgactaatccgaagggaccaatctcaccgcccacttgtgggggccctgtttaaagccagagcaag 48104985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 310
Target Start/End: Complemental strand, 11390718 - 11390677
Alignment:
Q  270 cagagcaagctctgtatggactt-gcccaccgaaattgacac 310  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  11390718 cagagcaagctctgtatggacttagcccaccaaaattgacac 11390677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 351
Target Start/End: Complemental strand, 26174143 - 26174114
Alignment:
Q  322 atcccaagccaaccactaggccaactccaa 351  Q
    ||||||||||||||||||||||||||||||    
T  26174143 atcccaagccaaccactaggccaactccaa 26174114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 40940945 - 40940904
Alignment:
Q  266 aagtcagagcaagctctgtatggactt-gcccaccgaaattg 306  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  40940945 aagtcagagcaagctctgtatggacttagtccaccgaaattg 40940904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 21776611 - 21776556
Alignment:
Q  190 aaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtcca 246  Q
    ||||||||||| || ||||||||||||||||||   | |||||||||||||||||||    
T  21776611 aaactcggtatccattccaaggatcgactaatc-ccggggaccaattccaccgtcca 21776556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 179 - 306
Target Start/End: Original strand, 7175852 - 7175980
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag 278  Q
    |||| |||| ||||||| |||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||||||||||  ||| |||||||||    
T  7175852 atttattttgaaaactcagtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcctgtttaaagccagagcaag 7175951  T
Q  279 ctctgtatggactt-gcccaccgaaattg 306  Q
    |||||||||||||| ||||||||||||||    
T  7175952 ctctgtatggacttagcccaccgaaattg 7175980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 189 - 306
Target Start/End: Complemental strand, 7275478 - 7275360
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatgg 288  Q
    |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| ||||||  ||| |||||||||||||||||||    
T  7275478 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatgg 7275379  T
Q  289 actt-gcccaccgaaattg 306  Q
    |||| ||||||||||||||    
T  7275378 acttagcccaccgaaattg 7275360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 27009566 - 27009442
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccac-ttacgggggtcctgttataagtcagagcaagctct 282  Q
    ||||||||||||||||| ||||||||| ||||||||||  ||| |||||||| ||||||||||| || | |||| || |||  |||||||||||||||||    
T  27009566 tttttaaaactcggtatccaatccaagaatcgactaatttgaggggaccaatcccaccgtccactttgcaggggccccgtttaaagtcagagcaagctct 27009467  T
Q  283 gtatggactt-gcccaccgaaattg 306  Q
    |||||||||| ||||||||||||||    
T  27009466 gtatggacttagcccaccgaaattg 27009442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 18044313 - 18044190
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||||||| ||||||||||| ||| ||||||||||||||  ||||||  ||||| || |||  ||| ||||||||||||||    
T  18044313 tttttaaaactcggtatccgatccaagaatcgactaatctgaggggaccaattccaccacccacttgtgggggccccgtttaaagccagagcaagctctg 18044214  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  18044213 tatggacttagcccaccgaaattg 18044190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 22120094 - 22119971
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  22120094 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 22119995  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  22119994 tatggacttagcccaccgaaattg 22119971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 40542905 - 40543028
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  40542905 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 40543004  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  40543005 tatggacttagcccaccgaaattg 40543028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 22703697 - 22703565
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag 278  Q
    |||| |||| |||||| ||||| | ||| ||| ||||||||||| ||| |||||||| |||||| |||||| ||||||||| |||  ||| |||||||||    
T  22703697 attttttttgaaaactgggtatccgatcaaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaag 22703598  T
Q  279 ctctgtatggactt-gcccaccgaaattgacac 310  Q
    || ||||||||||| ||||||||||||||||||    
T  22703597 ctttgtatggacttagcccaccgaaattgacac 22703565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 2751477 - 2751354
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| ||| || |||||| || |||  ||| ||||||||||||||    
T  2751477 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaagctctg 2751378  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  2751377 tatggacttagcccaccgaaattg 2751354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 3851963 - 3851840
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||||||| ||||||||||| ||| ||| |||| |||||| |||||| |||||| || |||  ||| |||||||||||||     
T  3851963 tttttaaaactcggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctcta 3851864  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  3851863 tatggacttagcccaccgaaattg 3851840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 17196945 - 17197068
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||||||| ||||||||||  ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  17196945 tttttaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 17197044  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| || |||||||||||    
T  17197045 tatggacttagctcaccgaaattg 17197068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 21835357 - 21835234
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||| ||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  21835357 ttttgaaaactcgatatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 21835258  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  21835257 tatggacttagcccaccgaaattg 21835234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 23092302 - 23092179
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||| | ||||||||||| ||| |||||||| |||||||||| || |||||| || |||  ||| ||||||||||||||    
T  23092302 ttttgaaaactcggtatccgatccatgaatcgactaatccgaggggaccaatcccaccgtccatttgcgggggccccgtttaaagccagagcaagctctg 23092203  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  23092202 tatggacttagcccaccgaaattg 23092179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 36772298 - 36772421
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||| ||| ||||||||||| |||||||| |||||||||| |||||  |||||| || |||  ||| ||||||||||||||    
T  36772298 tttttaaaactcggtatccgatcaaagaatcgactaatccgagaggactaattccaccgcccactcccgggggccccgtttaaagccagagcaagctctg 36772397  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    |||| |||| ||||||||||||||    
T  36772398 tatgaacttagcccaccgaaattg 36772421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 654700 - 654822
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| | ||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  654700 ttttgaaaactcggtatccgatccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcggggg-cccgtttaaagccagagcaagctctg 654798  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  654799 tatggacttagcccaccgaaattg 654822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 23330739 - 23330857
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaa-gctctgtatg 287  Q
    |||||||||||| | |||||||||| |||||||  ||| ||||||||   |||| |||||| ||| ||||| ||| |||| |||||||| ||||||||||    
T  23330739 aaaactcggtatccgatccaaggattgactaatttgaggggaccaatcttaccgcccacttgcggaggtcccgttttaagccagagcaaagctctgtatg 23330838  T
Q  288 gacttgcccaccgaaattg 306  Q
    |||||||||||||||||||    
T  23330839 gacttgcccaccgaaattg 23330857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 306
Target Start/End: Complemental strand, 16374205 - 16374077
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag 278  Q
    |||| |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||||||| || ||||||||| |||  ||| || |||||     
T  16374205 attttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccatttgcgggggtcccgtttaaagccatagcaaa 16374106  T
Q  279 ctctgtatggactt-gcccaccgaaattg 306  Q
     |||||||||||||  |||||||||||||    
T  16374105 ttctgtatggacttaacccaccgaaattg 16374077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 314
Target Start/End: Complemental strand, 27312363 - 27312227
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag 278  Q
    |||| |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| ||||||  | |||  |||||||||  ||    
T  27312363 attttttttgaaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagtcagaggtag 27312264  T
Q  279 ctctgtatggactt-gcccaccgaaattgacactaga 314  Q
    |||||||||||||| || || |||||||| |||||||    
T  27312263 ctctgtatggacttggcacatcgaaattggcactaga 27312227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 11998055 - 11997932
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||  ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||| ||    
T  11998055 ttttgaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggcccagtttaaagccagagcaagctatg 11997956  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||| ||||||||||    
T  11997955 tatggacttagccaaccgaaattg 11997932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 311
Target Start/End: Complemental strand, 21373888 - 21373788
Alignment:
Q  212 atcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaaattgacac 310  Q
    ||||||||||| | ||||||||||  |||||||||||| |||||| || |||  ||| ||||||||||||||||| ||||| |||||||||||||| |||    
T  21373888 atcgactaatccgtgaggaccaatctcaccgtccacttgcgggggccccgtttaaagccagagcaagctctgtatagacttagcccaccgaaattggcac 21373789  T
Q  311 t 311  Q
    |    
T  21373788 t 21373788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 2344505 - 2344382
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||||| ||||||||| ||| |||||||| ||||||  ||||| ||||||||| |||  ||| || |  ||||||||    
T  2344505 ttttgaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgctcacttgcgggggtcccgtttaaagccaaaaaaagctctg 2344406  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||| ||||||    
T  2344405 tatggacttagcccaccaaaattg 2344382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 17212239 - 17212136
Alignment:
Q  204 atccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaa 302  Q
    ||||||| ||||||||||| ||| |||||||| |||||   ||||| | ||||||| ||| |||| |||||||| |||||||||||||| ||||||||||    
T  17212239 atccaagaatcgactaatccgaggggaccaatcccaccactcacttgcaggggtcccgttttaagccagagcaatctctgtatggacttagcccaccgaa 17212140  T
Q  303 attg 306  Q
    ||||    
T  17212139 attg 17212136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 29861876 - 29861753
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||| ||| ||||||||||  ||| ||| |||| |||||| |||||| |||||| || |||  ||| ||||||||| ||||    
T  29861876 ttttgaaaactcggtatccgatctaagaatcgactaattcgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagttctg 29861777  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  29861776 tatggacttagcccaccgaaattg 29861753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 310
Target Start/End: Complemental strand, 31197796 - 31197669
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||| ||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  |||  |||||||| ||||    
T  31197796 ttttgaaaactcgatatccgatccaagaatcgactaatctgaggggaccaatcccaccgaccacttgcgggggccccgtttaaagcaagagcaagatctg 31197697  T
Q  284 tatggactt-gcccaccgaaattgacac 310  Q
    |||||||||   ||||||||||||||||    
T  31197696 tatggacttaatccaccgaaattgacac 31197669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 32849797 - 32849666
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||| ||||||||||| | ||||||| ||||||||||| ||| |||||||| |||| | ||||||| ||| ||||  ||  ||| |||||||||||| |    
T  32849797 ttttttaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccactgcccacttatgggagtcccatttaaagccagagcaagctcag 32849698  T
Q  284 tatggactt-gcccaccgaaattgacactaga 314  Q
    | ||||||| ||||||| ||||||| ||||||    
T  32849697 tgtggacttagcccaccaaaattgagactaga 32849666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 21217833 - 21217951
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatgg 288  Q
    |||||||||||| | ||||||| ||| ||||||| ||| ||| |||| |||||| ||||||  ||||| || |||  |||  ||||||||||||||||||    
T  21217833 aaaactcggtatccgatccaagaatcaactaatccgaggggatcaatcccaccgcccacttgtggggggcccgtttaaagctagagcaagctctgtatgg 21217932  T
Q  289 actt-gcccaccgaaattg 306  Q
    |||| ||||||||||||||    
T  21217933 acttagcccaccgaaattg 21217951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 306
Target Start/End: Complemental strand, 28647180 - 28647052
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag 278  Q
    |||| |||| |||||||| ||| | |||||||||  |||||||  ||| | |||||| |||||| ||||||  ||||| || |||||||| ||||||||     
T  28647180 attttttttaaaaactcgatatccgatccaaggacagactaattcgagggaaccaatcccaccgcccacttgtgggggccccgttataagccagagcaaa 28647081  T
Q  279 -ctctgtatggacttgcccaccgaaattg 306  Q
     |||||||| |||||||||||||||||||    
T  28647080 actctgtattgacttgcccaccgaaattg 28647052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 292
Target Start/End: Original strand, 42913508 - 42913616
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||| ||| ||| ||||||| ||| |||||||| ||||||||||||| |||||| || |||  ||| ||||||||| || |    
T  42913508 ttttgaaaactcggtatccgatctaagaatcaactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccagagcaagttccg 42913607  T
Q  284 tatggactt 292  Q
    |||||||||    
T  42913608 tatggactt 42913616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 2103232 - 2103138
Alignment:
Q  212 atcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaaattg 306  Q
    ||||||||||| ||| |||||||| |||||| |||||| |||||| ||  ||  ||| ||||||||||||||||||||||| ||||||||||||||    
T  2103232 atcgactaatccgag-ggaccaatcccaccgcccacttgcgggggccccatttaaagccagagcaagctctgtatggacttagcccaccgaaattg 2103138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 310
Target Start/End: Complemental strand, 19421437 - 19421310
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||| |||||||||||   || |||| ||||||||||| |||  ||||||| |||||| ||||||  ||| | ||  ||  ||||||||||||||||||    
T  19421437 ttttttaaactcggtatctgattcaagaatcgactaatccgaggagaccaatcccaccgcccacttgtgggcgccccatttaaagtcagagcaagctctg 19421338  T
Q  284 tatggactt-gcccaccgaaattgacac 310  Q
    ||||||||| ||||| ||||||||||||    
T  19421337 tatggacttagcccatcgaaattgacac 19421310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 302
Target Start/End: Original strand, 21574097 - 21574216
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagc-aagctct 282  Q
    |||| |||||||||||| | ||||||||| ||||||||| ||| ||||||||  ||||| | ||||  ||||| || ||| |||| | | || |||||||    
T  21574097 ttttgaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatctcaccgcctacttgtgggggccccgttctaagcctgggcaaagctct 21574196  T
Q  283 gtatggacttgcccaccgaa 302  Q
    ||||||||||||||||||||    
T  21574197 gtatggacttgcccaccgaa 21574216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 314
Target Start/End: Original strand, 23012503 - 23012634
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||| | | || |||||||  ||| |||||||| |||||| ||||||  ||||| ||  ||  ||| ||||||||||||||    
T  23012503 ttttgaaaactcggtatccgatcaatgaattgactaatacgaggggaccaatcccaccgcccacttgtgggggccccatttaaagccagagcaagctctg 23012602  T
Q  284 tatggactt-gcccaccgaaattgacactaga 314  Q
    ||||||||| |||||||||||||| |||||||    
T  23012603 tatggacttagcccaccgaaattggcactaga 23012634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 41907509 - 41907631
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||||||| ||||||||||| | | |||||||| |||||  |||||| |||||| |  |||  ||| |||||||| |||||    
T  41907509 tttttaaaactcggtatccgatccaagaatcgactaatctg-ggggaccaatcccaccacccacttgcgggggccacgtttaaagccagagcaacctctg 41907607  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| |||||| |||||||    
T  41907608 tatggacttagcccactgaaattg 41907631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 184 - 310
Target Start/End: Complemental strand, 28090025 - 28089895
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctc-- 281  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| ||||||||  || || |||||| |||||| ||  ||| ||| ||||||||||||      
T  28090025 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatctcatcgcccacttgcgggggcccattta-aagccagagcaagctcac 28089927  T
Q  282 --tgtatggactt-gcccaccgaaattgacac 310  Q
      ||||||||||| ||||||||||||||||||    
T  28089926 tttgtatggacttagcccaccgaaattgacac 28089895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 47541565 - 47541463
Alignment:
Q  208 aaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggacttgcccaccgaaattga 307  Q
    |||||||||||||||  || ||||||||||||| |||||||| |||||| || ||| |||| || |||||   ||| ||| ||||| |||||||||||||    
T  47541565 aaggatcgactaatctaaggggaccaattccactgtccacttgcggggggcccgttctaagccaaagcaaagcctggatgaacttgtccaccgaaattga 47541466  T
Q  308 cac 310  Q
    |||    
T  47541465 cac 47541463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 11909949 - 11910014
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccactt 249  Q
    ||||||||||||| |||  ||| |||||||||||||||  |||||||||||| |||||||||||||    
T  11909949 tttttaaaactcgatatctaattcaaggatcgactaattcgagaggaccaatcccaccgtccactt 11910014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 22696527 - 22696403
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacg-ggggtcct-gttataagtcagagc-aagct 280  Q
    ||||||||||||||||| | ||||||||| ||||||||| |||||||||||| || ||| | |||| || |||| ||| ||| |||| |||||| |||||    
T  22696527 tttttaaaactcggtatccgatccaaggaccgactaatccgagaggaccaatcccgccgcctacttgcgcgggggcctcgttctaagccagagcaaagct 22696428  T
Q  281 ctgtatggacttgcccaccgaaattg 306  Q
    |||||||||  | |||||||||||||    
T  22696427 ctgtatgga-gtccccaccgaaattg 22696403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 309
Target Start/End: Complemental strand, 9769785 - 9769666
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatgg 288  Q
    ||||||||||||||  | |||||| ||||||||   || |||||||| ||||||| || || |||||| || ||| |||| |||| ||||||||| |||     
T  9769785 aaaactcggtattcggttcaaggaccgactaattcaaggggaccaatcccaccgt-catttgcgggggccccgttctaagacagaacaagctctgaatga 9769687  T
Q  289 acttgcccaccgaaattgaca 309  Q
    |||||||||| ||||||||||    
T  9769686 acttgcccactgaaattgaca 9769666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 306
Target Start/End: Complemental strand, 10091371 - 10091271
Alignment:
Q  207 caaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaaatt 305  Q
    |||| ||||||||||| ||| ||| |||| |||||| |||||| |||||  ||  ||  ||| ||||||||||||||||||||||| |||||||||||||    
T  10091371 caagaatcgactaatccgaggggatcaatcccaccgcccacttgcggggaccccatttaaagccagagcaagctctgtatggacttagcccaccgaaatt 10091272  T
Q  306 g 306  Q
    |    
T  10091271 g 10091271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 306
Target Start/End: Complemental strand, 27704212 - 27704085
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag 278  Q
    |||| |||||||||||||||||   || |||| ||||||||||| ||| ||| ||||  ||||  |||||| |||||||||  ||| ||| || ||||||    
T  27704212 atttttttttaaaactcggtatctgattcaagaatcgactaatctgaggggatcaatcacaccacccacttgcgggggtccattta-aagccaaagcaag 27704114  T
Q  279 ctctgtatggactt-gcccaccgaaattg 306  Q
    |||| ||||||||| ||||||||||||||    
T  27704113 ctctctatggacttagcccaccgaaattg 27704085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 9684032 - 9683901
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||| |||||||||| || ||||||| ||||| ||||| ||| ||||| || | |||| ||||||  ||||  || |||  ||| ||||| |||||| |    
T  9684032 ttttttaaactcggtaatcgatccaagaatcgattaatccgaggggacctatcctaccgcccacttgtggggaccccgtttaaagccagagtaagctcgg 9683933  T
Q  284 tatggactt-gcccaccgaaattgacactaga 314  Q
    ||||||||| |||||||||||||| |||||||    
T  9683932 tatggacttagcccaccgaaattggcactaga 9683901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 292
Target Start/End: Original strand, 31712902 - 31713005
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatgg 288  Q
    |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| || |||||| | |  ||| ||||| ||||  |||||||    
T  31712902 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgagggtcccgcttaaagccagagtaagcgttgtatgg 31713001  T
Q  289 actt 292  Q
    ||||    
T  31713002 actt 31713005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 36395547 - 36395496
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccac 240  Q
    |||| ||||||| ||||||||| ||||||||||| |||||||||||||||||    
T  36395547 aaaattcggtatccaatccaagaatcgactaatccgagaggaccaattccac 36395496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 25333608 - 25333519
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagag 274  Q
    ||||||||||||||| | | ||||||| ||||||||||| ||| |||||||| |||| | |||||| |||||| ||||||  |||||||||    
T  25333608 tttttaaaactcggt-tccgatccaagaatcgactaatccgaggggaccaatcccactgcccacttgcggggggcctgtttaaagtcagag 25333519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 306
Target Start/End: Complemental strand, 28951083 - 28950954
Alignment:
Q  178 gatttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaa 277  Q
    ||||| ||||||||||||||||| | ||||||| || | ||| |  ||| |||||||| |||||| | |||| || ||| || |||  ||| ||||||||    
T  28951083 gatttttttttaaaactcggtatccgatccaagaattgtctagttcgaggggaccaatcccaccgccgacttgcgagggacccgtttaaagccagagcaa 28950984  T
Q  278 gctctgtatggactt-gcccaccgaaattg 306  Q
    ||||| |||| |||| ||||||||||||||    
T  28950983 gctctatatgaacttagcccaccgaaattg 28950954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 266 - 310
Target Start/End: Complemental strand, 42814988 - 42814943
Alignment:
Q  266 aagtcagagcaagctctgtatggactt-gcccaccgaaattgacac 310  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  42814988 aagtcagagcaagctttgtatggacttagcccaccgaaattgacac 42814943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 309
Target Start/End: Original strand, 22643419 - 22643463
Alignment:
Q  266 aagtcagagcaagctctgtatggactt-gcccaccgaaattgaca 309  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||    
T  22643419 aagtcagagcaagctctgtatggacttagcctaccgaaattgaca 22643463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 39145647 - 39145770
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||| |||||   || |||| ||||||||||  ||| |||||||| ||||||||||||| | |||| || |||  ||| ||||||||||||||    
T  39145647 tttttaaaacttggtatctgattcaagaatcgactaattcgaggggaccaatcccaccgtccacttgcagggg-cccgtttaaagccagagcaagctctg 39145745  T
Q  284 -tatggactt-gcccaccgaaattg 306  Q
     ||| ||||| ||||||||||||||    
T  39145746 ttattgacttagcccaccgaaattg 39145770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 35476547 - 35476424
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagc-aagctct 282  Q
    ||||| ||||||||||| | ||| || || |||||||||  ||  ||||||||||||||  || || | ||||||| ||| |||| |||||| |||||||    
T  35476547 ttttttaaactcggtatccgatctaaagaccgactaatccaaggagaccaattccaccggtcatttgcaggggtcccgttctaagccagagcaaagctct 35476448  T
Q  283 gtatggacttgcccaccgaaattg 306  Q
    ||||| |||| |||||| ||||||    
T  35476447 gtatgaacttacccaccaaaattg 35476424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 17279741 - 17279676
Alignment:
Q  180 tttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtcc 245  Q
    |||||||| |||||||||||| | |||||| || ||||||||  ||| |||||||| |||||||||    
T  17279741 tttcttttgaaaactcggtatccgatccaaagaccgactaatttgaggggaccaatcccaccgtcc 17279676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 256
Target Start/End: Original strand, 674431 - 674503
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacggggg 256  Q
    ||||||||| ||||| | | ||| ||||| ||||||||| ||| ||| |||| ||||||||||||||| ||||    
T  674431 tttttaaaattcggtgtccgatctaaggaccgactaatctgaggggatcaatcccaccgtccacttacagggg 674503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 292
Target Start/End: Original strand, 43785294 - 43785402
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| ||| |||||||| | ||||||  |||||||||||  || ||||||||  |||||||||||| ||| || || |||  ||  ||||| ||||||||    
T  43785294 ttttgaaagctcggtatccgatccaaaaatcgactaatccaaggggaccaatctcaccgtccacttgcggaggccccgtttaaaaccagagtaagctctg 43785393  T
Q  284 tatggactt 292  Q
    |||||||||    
T  43785394 tatggactt 43785402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 8e-28; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 6953003 - 6953125
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||||| ||||||| ||||||||||| ||| |||||||| |||||| | |||| |||||| ||||||  ||| ||||||||||||||    
T  6953003 tttttaaaactcggtattcgatccaagaatcgactaatccgag-ggaccaatcccaccgccaacttgcgggggccctgtttaaagccagagcaagctctg 6953101  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  6953102 tatggacttagcccaccgaaattg 6953125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 179 - 306
Target Start/End: Complemental strand, 4718856 - 4718728
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag 278  Q
    |||| |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| |||||||||    
T  4718856 attttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 4718757  T
Q  279 ctctgtatggactt-gcccaccgaaattg 306  Q
    |||||||||||||| ||||||||||||||    
T  4718756 ctctgtatggacttagcccaccgaaattg 4718728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 179 - 306
Target Start/End: Complemental strand, 21603441 - 21603313
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag 278  Q
    |||| ||||||||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| |||||||||    
T  21603441 atttttttttaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaag 21603342  T
Q  279 ctctgtatggactt-gcccaccgaaattg 306  Q
    |||||||||| ||| ||||||||||||||    
T  21603341 ctctgtatgggcttagcccaccgaaattg 21603313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 20306114 - 20305991
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||||||||||||||  ||| |||||||| |||||| |||||| ||||||||| |||  ||| ||||||||||||||    
T  20306114 ttttgaaaactcggtatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctctg 20306015  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||| ||||||||    
T  20306014 tatggacttagcccatcgaaattg 20305991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 21092747 - 21092624
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||||||||||||||  ||| |||||||| |||||| |||||| ||||||||| |||  ||| ||||||||||||||    
T  21092747 ttttgaaaactcggtatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctctg 21092648  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||| ||||||||    
T  21092647 tatggacttagcccatcgaaattg 21092624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 182
Target Start/End: Original strand, 8953665 - 8953802
Alignment:
Q  61 agaaaatgtgccttcttcaacttgcttcactaccaagtagccattaagaac----------------ttggggtttacatttttgtctctattcacttaa 144  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||                |||||||   |||||||||||||||||||||||    
T  8953665 agaaaatgtgccttcttcaacttgcttcactagcaagtagcaattaagaacaaattataaccacaacttggggtcctcatttttgtctctattcacttaa 8953764  T
Q  145 attgtccaaccatgcttgataacgacataattagattt 182  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  8953765 attgtccaaccatgctcgataatgacataattagattt 8953802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 18128719 - 18128596
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagc-aagctct 282  Q
    ||||||||||||||||||| ||||||| | ||||||||| |||||||||||| |||||| |||||| |||||| || |||  ||| |||||| |||||||    
T  18128719 tttttaaaactcggtattcgatccaagaaccgactaatctgagaggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaaagctct 18128620  T
Q  283 gtatggacttgcccaccgaaattg 306  Q
     |||||| | ||||||||||||||    
T  18128619 ttatggattcgcccaccgaaattg 18128596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 32879485 - 32879362
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| ||||||||| ||||||||||| ||| |||||||| |||||| ||||||  ||||| || |||  | ||||||||||||||||    
T  32879485 ttttgaaaactcggtatccaatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaatgtcagagcaagctctg 32879386  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    |||| |||| ||||||||||||||    
T  32879385 tatgaacttagcccaccgaaattg 32879362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 34237650 - 34237773
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| ||||||  ||||| |||||| || |||  ||| ||||||||||||||    
T  34237650 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggccccgtttaaagccagagcaagctctg 34237749  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  34237750 tatggacttagcccaccgaaattg 34237773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 306
Target Start/End: Original strand, 8765516 - 8765644
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag 278  Q
    |||| |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||| | || |||  ||| |||||||||    
T  8765516 attttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagcaag 8765615  T
Q  279 ctctgtatggactt-gcccaccgaaattg 306  Q
    |||||||||||||| ||||| ||||||||    
T  8765616 ctctgtatggacttagcccatcgaaattg 8765644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 3734618 - 3734741
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||| | ||| || |||||| || |||  ||| ||||||||||||||    
T  3734618 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccactgcccatttgcgggggccccgtttaaagccagagcaagctctg 3734717  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  3734718 tatggacttagcccaccgaaattg 3734741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 15259401 - 15259524
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||| |||||||| || | ||||||| ||||||||||  ||| ||||||||| ||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  15259401 ttttttaaactcggcatccgatccaagaatcgactaattcgaggggaccaattacaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 15259500  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  15259501 tatggacttagcccaccgaaattg 15259524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 33747088 - 33746957
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagc-aagctct 282  Q
    |||| |||||||||||| | ||||||||||||||||||| ||||| |||||||||||||||||||| ||||||  | ||| |||  |||| | ||||| |    
T  33747088 ttttgaaaactcggtatccgatccaaggatcgactaatccgagagaaccaattccaccgtccacttgcgggggctccgttctaaaccagaacaaagcttt 33746989  T
Q  283 gtatggacttgcccaccgaaattgacactaga 314  Q
     |||| | ||||||||||||||| ||||||||    
T  33746988 atatgaatttgcccaccgaaattaacactaga 33746957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 39349462 - 39349339
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||| ||||| | ||||||| ||||||||||| ||| ||| |||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  39349462 ttttgaaaacttggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 39349363  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  39349362 tatggacttagcccaccgaaattg 39349339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 42328210 - 42328087
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||  ||| |||||||| ||| |||||||||  ||||| || |||  ||| ||||||||||||||    
T  42328210 ttttgaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccatcgtccacttgtgggggccccgtttaaagccagagcaagctctg 42328111  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  42328110 tatggacttagcccaccgaaattg 42328087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 188 - 314
Target Start/End: Original strand, 42643117 - 42643244
Alignment:
Q  188 taaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatg 287  Q
    ||||||||||||| | ||||||| ||| ||||||  ||| |||||||| |||||| |||||| |||||  || |||  ||| ||||||||||||||||||    
T  42643117 taaaactcggtatccgatccaagaatcaactaatgcgaggggaccaatcccaccgcccacttgcggggcccccgtttcaagacagagcaagctctgtatg 42643216  T
Q  288 gactt-gcccaccgaaattgacactaga 314  Q
    ||||| |||||||||||||| |||||||    
T  42643217 gacttagcccaccgaaattggcactaga 42643244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 2618392 - 2618269
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| ||||||||| || | ||||||| ||||||||||| ||| |||||||| |||||| |||||| ||||||  | |||  ||| ||||||||||||||    
T  2618392 ttttgaaaactcggaatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccagagcaagctctg 2618293  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| |||||| |||||||    
T  2618292 tatggacttagcccactgaaattg 2618269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 28193680 - 28193557
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||| ||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| ||||||   |||| || |||  ||| ||||||||||||||    
T  28193680 ttttttaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtaggggccccgtttaaagccagagcaagctctg 28193581  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    |||||||||  |||||||||||||    
T  28193580 tatggacttaacccaccgaaattg 28193557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 355 - 425
Target Start/End: Original strand, 8954057 - 8954126
Alignment:
Q  355 gtgacataattagatcttaatgatacataggcttaatgtggctcgtttattattttgtctttacatggaac 425  Q
    |||| |||||||||| |||||||| ||||||||| |||||||||||||||| |||||||||||||||||||    
T  8954057 gtgatataattagat-ttaatgatgcataggctttatgtggctcgtttatttttttgtctttacatggaac 8954126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 4698713 - 4698845
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag 278  Q
    |||| |||| |||||||||||| ||||||| | ||||||||||| ||| |||||||| ||||||  ||||| ||||||  | |||  ||| |||||||||    
T  4698713 attttttttgaaaactcggtatccaatccatgaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggctccgtttaaagccagagcaag 4698812  T
Q  279 ctctgtatggactt-gcccaccgaaattgacac 310  Q
     |||  |||||||| ||||||||||||||||||    
T  4698813 ttcttcatggacttagcccaccgaaattgacac 4698845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 292
Target Start/End: Complemental strand, 20470122 - 20470015
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||||||  ||||||||||| ||| | |||||| |||||| |||||| ||||||  |||||  ||| ||||||||||||||    
T  20470122 tttttaaaactcggtatccgatccaaaaatcgactaatccgag-gaaccaatcccaccgcccacttgcgggggctctgtttaaagccagagcaagctctg 20470024  T
Q  284 tatggactt 292  Q
    |||||||||    
T  20470023 tatggactt 20470015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 185 - 292
Target Start/End: Complemental strand, 2166901 - 2166795
Alignment:
Q  185 ttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgt 284  Q
    |||||||||||||||| ||||| ||  ||||||||||| ||| |||||||| |||||| |||||| | |||||| | ||  ||| |||||||||||||||    
T  2166901 ttttaaaactcggtatccaatcaaaaaatcgactaatctgaggggaccaatcccaccgcccacttgc-ggggtcttatttaaagccagagcaagctctgt 2166803  T
Q  285 atggactt 292  Q
    ||||||||    
T  2166802 atggactt 2166795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 310
Target Start/End: Complemental strand, 28088472 - 28088365
Alignment:
Q  204 atccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaa 302  Q
    ||||||| |||||||| || ||| ||| |||| |||||| |||||| ||| || ||  ||  |||||||||||||||||||||||||||  |||||||||    
T  28088472 atccaagaatcgactattctgaggggatcaatcccaccgcccacttgcggaggccccatttaaagtcagagcaagctctgtatggacttaacccaccgaa 28088373  T
Q  303 attgacac 310  Q
    ||||||||    
T  28088372 attgacac 28088365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 34610682 - 34610805
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||  ||| |||||||||| |||| |||||| || ||| |  |||  ||| ||||||||||||||    
T  34610682 ttttgaaaactcggtatccgatccaagaatcgactaattcgaggggaccaattctaccgcccacttgcgaggggctcgtttaaagccagagcaagctctg 34610781  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||| ||||| | ||||||||||||    
T  34610782 tatagacttagaccaccgaaattg 34610805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 277
Target Start/End: Original strand, 2639406 - 2639499
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaa 277  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||    
T  2639406 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa 2639499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 292
Target Start/End: Complemental strand, 19471816 - 19471707
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttac-gggggtcctgttataagtcagagcaagctct 282  Q
    |||| |||||||||||| | ||||||| ||||||||||  ||| |||||||| ||| || |||||| | ||||| || |||  ||| |||||||||||||    
T  19471816 ttttgaaaactcggtatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcaagctct 19471717  T
Q  283 gtatggactt 292  Q
    ||||||||||    
T  19471716 gtatggactt 19471707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 292
Target Start/End: Complemental strand, 19542740 - 19542631
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttac-gggggtcctgttataagtcagagcaagctct 282  Q
    |||| |||||||||||| | ||||||| ||||||||||  ||| |||||||| ||| || |||||| | ||||| || |||  ||| |||||||||||||    
T  19542740 ttttgaaaactcggtatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcaagctct 19542641  T
Q  283 gtatggactt 292  Q
    ||||||||||    
T  19542640 gtatggactt 19542631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 292
Target Start/End: Original strand, 19589956 - 19590065
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttac-gggggtcctgttataagtcagagcaagctct 282  Q
    |||| |||||||||||| | ||||||| ||||||||||  ||| |||||||| ||| || |||||| | ||||| || |||  ||| |||||||||||||    
T  19589956 ttttgaaaactcggtatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcaagctct 19590055  T
Q  283 gtatggactt 292  Q
    ||||||||||    
T  19590056 gtatggactt 19590065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 27746330 - 27746453
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtcc-acttacgggggtcctgttataagtcagagcaagctct 282  Q
    |||| |||| ||| ||||| ||||||| ||||||||||| ||| |||| ||||||| || || ||||  ||||  ||| ||| ||| |||||||||||||    
T  27746330 ttttgaaaaatcgatattcgatccaagaatcgactaatccgaggggactaattccatcgccccacttgtggggcccctttta-aagccagagcaagctct 27746428  T
Q  283 gtatggactt-gcccaccgaaattg 306  Q
    |||||||||| ||||||||||||||    
T  27746429 gtatggacttagcccaccgaaattg 27746453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 305
Target Start/End: Complemental strand, 21667727 - 21667634
Alignment:
Q  212 atcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaaatt 305  Q
    ||||||||||| ||| ||||||||||||||| |||||| |||  |  | |||  ||| ||||||||||||||||||||||| |||||||||||||    
T  21667727 atcgactaatctgag-ggaccaattccaccgcccacttgcggatgctccgtttaaaggcagagcaagctctgtatggacttagcccaccgaaatt 21667634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 13749242 - 13749138
Alignment:
Q  204 atccaaggatcgactaatcagagaggaccaattccaccgtccacttac-gggggtcctgttataagtcagagc-aagctctgtatggacttgcccaccga 301  Q
    |||||||||  |||||||| ||| ||||||||||||| | |||||| | ||||| || ||| |||| |||||| ||||| |||||| ||||||||||| |    
T  13749242 atccaaggactgactaatccgaggggaccaattccactgcccacttgcggggggccccgttctaagccagagcaaagctttgtatgaacttgcccaccaa 13749143  T
Q  302 aattg 306  Q
    |||||    
T  13749142 aattg 13749138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 7557946 - 7558021
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcc 259  Q
    ||||| ||||||||||| | || |||  ||||||||||  ||| |||||||| ||||||||||||| |||||||||    
T  7557946 ttttttaaactcggtatccgatgcaaaaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggtcc 7558021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 283
Target Start/End: Complemental strand, 10292260 - 10292161
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||||| ||||||| ||| ||||||| ||  |||||||| |||||| ||||||  ||||| || |||  ||| |||||||| |||||    
T  10292260 ttttaaaaactcggtattcgatccaagaatcaactaatccgaagggaccaatcccaccgcccacttgtgggggccccgtttaaagccagagcaatctctg 10292161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 310
Target Start/End: Complemental strand, 25248552 - 25248428
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||| ||  ||||||||||| ||| |||||||| |||||| |||||| || ||| || |||  ||| |||||||| |||||    
T  25248552 tttttaaaactcggtatccgatcaaaa-atcgactaatccgaggggaccaatcccaccgcccacttgcgaggg-cccgtttaaagccagagcaaactctg 25248455  T
Q  284 tatggactt-gcccaccgaaattgacac 310  Q
    ||| ||||| ||| ||||||||||||||    
T  25248454 tat-gacttagcctaccgaaattgacac 25248428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 34639208 - 34639325
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaa-gctctgtatg 287  Q
    |||||| ||||| |||| |||||| ||| ||||  ||  |||||||| | ||||||||||| | | || || ||| |||| |||||||| ||||||||||    
T  34639208 aaaacttggtatccaattcaaggaccgattaattcgaagggaccaatcctaccgtccacttgcagaggccc-gttctaagccagagcaaagctctgtatg 34639306  T
Q  288 gacttgcccaccgaaattg 306  Q
    ||||| |||||||||||||    
T  34639307 gacttacccaccgaaattg 34639325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 24018502 - 24018457
Alignment:
Q  270 cagagcaagctctgtatggactt-gcccaccgaaattgacactaga 314  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  24018502 cagagcaagctctgtatggacttagcccactgaaattgacattaga 24018457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 34694565 - 34694634
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccact 248  Q
    |||| |||| |||||||| ||| | |||||||||  |||||||| ||| |||||||| ||||||||||||    
T  34694565 attttttttgaaaactcgttatccgatccaaggacagactaatctgaggggaccaatcccaccgtccact 34694634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 307
Target Start/End: Complemental strand, 1219555 - 1219431
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||| ||||||||| ||| ||| ||||||||||| ||  ||||| || | |||| ||||||| ||||| || |||  ||| |||| |||  ||||    
T  1219555 ttttgaaaattcggtattcgatctaagaatcgactaatccgaagggaccgatcctaccgcccacttatgggggccccgtttaaagccagaacaaattctg 1219456  T
Q  284 tatggactt-gcccaccgaaattga 307  Q
    ||||||||| |||||| ||||||||    
T  1219455 tatggacttagcccactgaaattga 1219431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 9047317 - 9047381
Alignment:
Q  228 ggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt 292  Q
    ||||||||||||| |||||| | ||||||| | |||  ||||||||| ||||| |||||||||||    
T  9047317 ggaccaattccactgtccacatgcgggggttccgtttaaagtcagagtaagctttgtatggactt 9047381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 18532227 - 18532187
Alignment:
Q  270 cagagcaagctctgtatggactt-gcccaccgaaattgaca 309  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  18532227 cagagcaagttctgtatggacttagcccaccgaaattgaca 18532187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 26168930 - 26168966
Alignment:
Q  270 cagagcaagctctgtatggacttgcccaccgaaattg 306  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  26168930 cagaacaagctctgtatgaacttgcccaccgaaattg 26168966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 310
Target Start/End: Complemental strand, 28909030 - 28908902
Alignment:
Q  184 tttttaaaactcggtattca-atccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaa-gctc 281  Q
    ||||||||||||||| | |  ||||||||| ||||||||| ||| ||| ||||  || || |||||| |||| | || |||  ||| |||| ||| ||||    
T  28909030 tttttaaaactcggtgtcccgatccaaggaccgactaatctgaggggatcaatcacatcgcccacttgcgggagccccgtttaaagccagaacaaagctc 28908931  T
Q  282 tgtatggacttgcccaccgaaattgacac 310  Q
    ||||||||||||||||| | |||||||||    
T  28908930 tgtatggacttgcccactgtaattgacac 28908902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 7085626 - 7085752
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatgg 288  Q
    |||||||||||| | || |||| ||||||||||| ||| |||||||| |||||| |||||| |||||  || |||  |||||||||||||||||||||||    
T  7085626 aaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagtcagagcaagctctgtatgg 7085725  T
Q  289 actt-gcccaccgaaattgacactaga 314  Q
    |||| ||||||||||||||||||||||    
T  7085726 acttagcccaccgaaattgacactaga 7085752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 32059435 - 32059558
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||||| ||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  32059435 ttttgaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 32059534  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  32059535 tatggacttagcccaccgaaattg 32059558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 34310344 - 34310221
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||||||| ||||| ||||  ||| |||||||| |||||||||||||| |||||||| |||  ||| ||||||||||||||    
T  34310344 tttttaaaactcggtatccgatccaagaatcgattaattcgaggggaccaatcccaccgtccacttatgggggtcccgtttaaagccagagcaagctctg 34310245  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||| ||||||    
T  34310244 tatggacttagcccaccaaaattg 34310221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 35425215 - 35425084
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||| ||||||| | ||||||| ||||||||||| |||||||||||| |||||| |||||| |||||| || |||  ||| |||||| |||||||    
T  35425215 ttttgaaaattcggtatccgatccaagaatcgactaatccgagaggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcgagctctg 35425116  T
Q  284 tatggactt-gcccaccgaaattgacactaga 314  Q
    ||||||||| |||||||||||||| |||||||    
T  35425115 tatggacttagcccaccgaaattggcactaga 35425084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 8484656 - 8484779
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  8484656 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 8484755  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    |||| |||| ||||||||||||||    
T  8484756 tatgaacttagcccaccgaaattg 8484779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 27498726 - 27498849
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||| ||    
T  27498726 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctatg 27498825  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  27498826 tatggacttagcccaccgaaattg 27498849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 307
Target Start/End: Original strand, 9659306 - 9659430
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||||||| ||| ||||||| ||  |||||||| ||||||||||||| |||||| ||  ||  ||| ||||||||||| ||    
T  9659306 tttttaaaactcggtatcccatccaagaatcaactaatccgaagggaccaatcccaccgtccacttgcggggggcccatttaaagccagagcaagctgtg 9659405  T
Q  284 tatggactt-gcccaccgaaattga 307  Q
    ||||||||| |||||||||||||||    
T  9659406 tatggacttagcccaccgaaattga 9659430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 11926496 - 11926620
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttac-gggggtcctgttataagtcagagcaagctct 282  Q
    ||||||||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||  |||||| | ||||| || |||  ||| |||||||||||||    
T  11926496 tttttaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccacccacttgcggggggccccgtttaaagccagagcaagctct 11926595  T
Q  283 gtatggactt-gcccaccgaaattg 306  Q
    |||||||||| ||||||||||||||    
T  11926596 gtatggacttagcccaccgaaattg 11926620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 4603979 - 4603856
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||||| ||||||||| ||| |||||||| ||||||||||||| | |||| || |||  ||| |||||| |||||||    
T  4603979 ttttgaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgtccacttgcaggggccccgtttaaagccagagcgagctctg 4603880  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||| ||||||||    
T  4603879 tatggacttagcccatcgaaattg 4603856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 15641101 - 15641223
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||| ||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  15641101 ttttgaaaactcggtatccgatc-aagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 15641199  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  15641200 tatggacttagcccaccgaaattg 15641223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 18207409 - 18207286
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| |  |||  ||| |||| |||||||||    
T  18207409 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggcctcgtttaaagccagaacaagctctg 18207310  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  18207309 tatggacttagcccaccgaaattg 18207286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 19145407 - 19145529
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagc-aagctct 282  Q
    ||||||||||||||||| | ||||||| | | ||||||| ||| |||||||| |||||| |||||| |||||| ||  ||| ||| |||||| |||||||    
T  19145407 tttttaaaactcggtatccgatccaagaaccaactaatccgaggggaccaatcccaccgcccacttgcgggggaccattta-aagccagagcaaagctct 19145505  T
Q  283 gtatggacttgcccaccgaaattg 306  Q
    ||||||||||||||||||||||||    
T  19145506 gtatggacttgcccaccgaaattg 19145529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 19456206 - 19456328
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| | |||| || |||  ||| ||||||||||||||    
T  19456206 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgc-ggggccccgtttaaagccagagcaagctctg 19456304  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  19456305 tatggacttagcccaccgaaattg 19456328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 23270517 - 23270640
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||| ||||| ||||||||| ||| ||||||| ||| |||||||| |||||||||| || ||||||  | |||  ||| || |||||||||||    
T  23270517 tttttaaaacttggtatccaatccaagaatcaactaatccgaggggaccaatcccaccgtccatttgcgggggctccgtttaaagccaaagcaagctctg 23270616  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  23270617 tatggacttagcccaccgaaattg 23270640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 310
Target Start/End: Complemental strand, 30486030 - 30485903
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| || |||||||| ||| |||||||| |||||| |||||| ||||||    |||  ||| ||||||||||||||    
T  30486030 ttttgaaaactcggtatccgatccaagaattgactaatccgaggggaccaatcccaccgcccacttgcgggggcatcgtttaaagccagagcaagctctg 30485931  T
Q  284 tatggactt-gcccaccgaaattgacac 310  Q
    ||||||||| ||||||||||||||||||    
T  30485930 tatggacttagcccaccgaaattgacac 30485903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 10399976 - 10399852
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagag-gaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctct 282  Q
    ||||||||||||| ||||  ||||||| ||||||||||  ||| | ||||||| |||||||||||||||||||| || |||  ||||||||||| ||||     
T  10399976 tttttaaaactcgctatttgatccaagaatcgactaattcgagggtgaccaatcccaccgtccacttacgggggccccgtttaaagtcagagcatgctcc 10399877  T
Q  283 gtatggactt-gcccaccgaaattg 306  Q
    |||||||||| ||||| ||||||||    
T  10399876 gtatggacttagcccatcgaaattg 10399852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 38684409 - 38684287
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||| ||||||| | ||||||| ||||||||||| ||| |||||||| ||||||  ||||| |||||| || |||  ||| ||||||||||||||    
T  38684409 ttttgaaaaatcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcggggg-cccgtttaaagccagagcaagctctg 38684311  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  38684310 tatggacttagcccaccgaaattg 38684287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 21236362 - 21236488
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatgg 288  Q
    |||||||||||| | || |||| ||||||||||| ||| |||| ||| |||||| |||||| |||||| || |||  ||||||||| || ||||||||||    
T  21236362 aaaactcggtatccgattcaagaatcgactaatctgaggggactaatcccaccgcccacttgcgggggccccgtttaaagtcagagaaaactctgtatgg 21236461  T
Q  289 actt-gcccaccgaaattgacactaga 314  Q
    |||| |||||  |||||||||||||||    
T  21236462 acttagcccattgaaattgacactaga 21236488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 310
Target Start/End: Original strand, 12398443 - 12398570
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| ||||||||| | ||||||||  ||||||| ||||  ||||||||| || |||||| ||  ||  ||| ||||||||||||||    
T  12398443 ttttgaaaactcggtatccaatccaagaaccgactaatttgagaggatcaatctcaccgtccatttgcgggggccccatttaaagccagagcaagctctg 12398542  T
Q  284 tatggactt-gcccaccgaaattgacac 310  Q
    |||| |||| | ||||||||||||||||    
T  12398543 tatgaacttaggccaccgaaattgacac 12398570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 256
Target Start/End: Complemental strand, 22693142 - 22693065
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacggggg 256  Q
    |||| ||||||||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| ||||||    
T  22693142 atttttttttaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggg 22693065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 15971171 - 15971243
Alignment:
Q  238 caccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaaattgaca 309  Q
    ||||| |||||| ||||||||| |||  ||||||||||||||| ||||||||||| |||||||||||||||||    
T  15971171 caccgcccacttgcgggggtcccgtttaaagtcagagcaagctatgtatggacttagcccaccgaaattgaca 15971243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 33709498 - 33709619
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| ||||| |||||| | ||||||| ||||||||||| ||| |||||||| |||||| ||||||  |||||||| |||  ||| ||||||   |||||    
T  33709498 ttttgaaaacacggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggtcccgtttaaagccagagc--tctctg 33709595  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  33709596 tatggacttagcccaccgaaattg 33709619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 930481 - 930602
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||| ||| | ||||||||| ||||||||| ||| ||||||||  ||| |||||||| || ||| | |||| |||| | ||||||||| ||    
T  930481 tttttaaaactcgatatccgatccaaggaccgactaatccgaggggaccaatcacactgtccacttgcgaggg-cttgttctaagccggagcaagctatg 930579  T
Q  284 tatggacttgcccaccgaaattg 306  Q
    |||| | ||| ||||||||||||    
T  930580 tatgaatttgtccaccgaaattg 930602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 22392890 - 22392796
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag 278  Q
    |||| |||||||||||| | ||||||  ||||||||||| ||| ||||||||||||||| |||||| |||||| || |||  ||| |||||||||    
T  22392890 ttttgaaaactcggtatccgatccaaaaatcgactaatctgaggggaccaattccaccgcccacttgcgggggccccgtttaaagccagagcaag 22392796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 25750608 - 25750727
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||||||| ||||||||||| ||  ||||||||  ||||  ||||||  |||||||| ||  |||| |||||||||||||     
T  25750608 tttttaaaactcggtatccgatccaagaatcgactaatctgaagggaccaatctcaccccccactt--gggggtcccgt--taagccagagcaagctcta 25750703  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    |||||||||  |||||||||||||    
T  25750704 tatggacttaacccaccgaaattg 25750727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 292
Target Start/End: Complemental strand, 34050013 - 34049905
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||   || ||| ||||||| ||| |||||||| | |||| |||||| |||||| || |||  ||| ||||||||||||||    
T  34050013 tttttaaaactcggtatccgatttgagaatcaactaatccgaggggaccaatcctaccgaccacttgcgggggccccgtttaaagccagagcaagctctg 34049914  T
Q  284 tatggactt 292  Q
    |||||||||    
T  34049913 tatggactt 34049905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 292
Target Start/End: Complemental strand, 5049333 - 5049231
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatgg 288  Q
    |||||| ||||||| ||||||| ||||||||||  ||  |||||||| |||||||||| || |||||| ||  ||| ||| ||||||||||||||||||     
T  5049333 aaaacttggtattcgatccaagaatcgactaattcgatgggaccaatcccaccgtccatttgcgggggcccgttta-aagccagagcaagctctgtatga 5049235  T
Q  289 actt 292  Q
    ||||    
T  5049234 actt 5049231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 6014275 - 6014398
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||| ||| | ||||||| ||||||||||  ||| |||| |||  ||||| |||||| || ||  || |||  ||| ||||||||||||||    
T  6014275 tttttaaaactcgatatccgatccaagaatcgactaattcgaggggactaatctcaccgcccacttgcgtggaccccgtttaaagccagagcaagctctg 6014374  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    |||||||||  |||||||||||||    
T  6014375 tatggacttaacccaccgaaattg 6014398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 310
Target Start/End: Original strand, 24158161 - 24158288
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaa-gctct 282  Q
    ||||||||| ||||||| | || |||||| ||||||||| ||| ||||||||  ||||| |||||| | | || || ||| |||| ||||| || ||| |    
T  24158161 tttttaaaattcggtatccgattcaaggaccgactaatctgaggggaccaatctcaccgcccacttgcagaggccccgttctaagccagagtaaagctat 24158260  T
Q  283 gtatggacttgcccaccgaaattgacac 310  Q
    |||||||||| |||| ||||||||||||    
T  24158261 gtatggacttacccatcgaaattgacac 24158288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 25587066 - 25587011
Alignment:
Q  252 gggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaaattg 306  Q
    ||||||||||||  ||| ||||||||||||||||||||||| ||||||||||||||    
T  25587066 gggggtcctgtttaaagccagagcaagctctgtatggacttagcccaccgaaattg 25587011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 306
Target Start/End: Original strand, 27487550 - 27487673
Alignment:
Q  185 ttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttac-gggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||| |||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |  |||  || |||  |||  |||||||||||||    
T  27487550 ttttaaaactctgtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcaagggcccccgtttaaagctagagcaagctctg 27487649  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| | ||||||||||||    
T  27487650 tatggacttagtccaccgaaattg 27487673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 31287941 - 31288064
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| |  |||||| | ||||||||  |||  ||||||| |||||| |||||| |||||| || |||  |||||| |||||||| ||    
T  31287941 ttttgaaaactcggtatccggtccaagaaccgactaattcgaggagaccaatcccaccgcccacttgcgggggccccgtttaaagtcaaagcaagctttg 31288040  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    |||||||||  |||||||||||||    
T  31288041 tatggacttaacccaccgaaattg 31288064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 37495256 - 37495186
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacggg 254  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| ||||    
T  37495256 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggg 37495186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 41351099 - 41351164
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccactt 249  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| ||||||    
T  41351099 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccactt 41351164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 256
Target Start/End: Original strand, 38630974 - 38631046
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacggggg 256  Q
    |||| |||||||||||| | ||||||| ||||| ||||| ||| |||||||| |||||| |||||| ||||||    
T  38630974 ttttgaaaactcggtatccgatccaagaatcgattaatccgaggggaccaatcccaccgcccacttgcggggg 38631046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 255
Target Start/End: Complemental strand, 5067443 - 5067392
Alignment:
Q  204 atccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggg 255  Q
    ||||||| ||||||||||||||| |||||||| |||||| |||||| |||||    
T  5067443 atccaagaatcgactaatcagaggggaccaatcccaccgcccacttgcgggg 5067392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 25548524 - 25548587
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccg 242  Q
    |||| |||| |||||||||||||| ||||||| ||||||||||  |||| ||||||| ||||||    
T  25548524 attttttttgaaaactcggtattcgatccaagaatcgactaattcgagatgaccaatcccaccg 25548587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 42193665 - 42193564
Alignment:
Q  204 atccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaa 302  Q
    ||||||| ||||||||||| |||||||||||  |||||| |||||| | |||||||  ||| ||| || ||||| |||||||| ||||| ||||||||||    
T  42193665 atccaagaatcgactaatccgagaggaccaaccccaccgcccacttgc-ggggtccattta-aagccaaagcaaactctgtatagacttagcccaccgaa 42193568  T
Q  303 attg 306  Q
    ||||    
T  42193567 attg 42193564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 10631284 - 10631340
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccac 240  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| ||||    
T  10631284 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccac 10631340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 5e-26; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 184 - 292
Target Start/End: Original strand, 11941205 - 11941313
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| ||||||||| |||  ||| ||||||||||||||    
T  11941205 tttttaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctctg 11941304  T
Q  284 tatggactt 292  Q
    |||||||||    
T  11941305 tatggactt 11941313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 30466825 - 30466948
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||||||| ||||||||||| ||  |||||||| |||| | |||||| |||||| || |||  ||| ||||||||||||||    
T  30466825 tttttaaaactcggtatccgatccaagaatcgactaatccgaagggaccaatcccactgcccacttgcgggggcccggtttaaagccagagcaagctctg 30466924  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  30466925 tatggacttagcccaccgaaattg 30466948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 35172002 - 35171879
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | || |||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  35172002 ttttgaaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 35171903  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  35171902 tatggacttagcccaccgaaattg 35171879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 44946048 - 44946171
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||| ||||    
T  44946048 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagttctg 44946147  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  44946148 tatggacttagcccaccgaaattg 44946171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 15038161 - 15038038
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| ||||||  | |||  ||| || |||||||||||    
T  15038161 ttttgaaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccaaagcaagctctg 15038062  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  15038061 tatggacttagcccaccgaaattg 15038038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 18708679 - 18708556
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagc-aagctct 282  Q
    ||||||||| | ||||||||||| ||| | ||||||||| ||| ||| |||| |||||||||| || ||||||||| ||| ||||||||||| |||||||    
T  18708679 tttttaaaatttggtattcaatctaagtaccgactaatctgaggggatcaatcccaccgtccatttgcgggggtcccgttttaagtcagagcaaagctct 18708580  T
Q  283 gtatggacttgcccaccgaaattg 306  Q
    ||||| || ||||||| |||||||    
T  18708579 gtatgaacatgcccactgaaattg 18708556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 33827568 - 33827691
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| |||||||||||  || |||||||| |||||| |||||| | ||||||| |||  ||| ||||||||||||||    
T  33827568 ttttgaaaactcggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttgcaggggtcccgtttaaagccagagcaagctctg 33827667  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||| ||||||||    
T  33827668 tatggacttagcccaacgaaattg 33827691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 310
Target Start/End: Original strand, 27269344 - 27269466
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatgg 288  Q
    |||||||||||| | ||||||| ||||||||||| ||| ||| |||| |||||| |||||| |||| |  |||||  ||| ||||||||| ||| |||||    
T  27269344 aaaactcggtatcctatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggagggctgtttaaagccagagcaagttctatatgg 27269443  T
Q  289 actt-gcccaccgaaattgacac 310  Q
    |||| ||||||||||||||||||    
T  27269444 acttagcccaccgaaattgacac 27269466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 310
Target Start/End: Complemental strand, 41314188 - 41314067
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatgg 288  Q
    |||||| ||||| | ||| ||| ||||| ||||| ||| |||||||| ||||||||||||| | ||| ||| |||  ||||||||||||||||||||| |    
T  41314188 aaaacttggtatccgatcgaagaatcgattaatctgaggggaccaatcccaccgtccacttgc-gggatcccgtttaaagtcagagcaagctctgtatag 41314090  T
Q  289 actt-gcccaccgaaattgacac 310  Q
    |||| ||||||||||||||||||    
T  41314089 acttagcccaccgaaattgacac 41314067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 714120 - 714243
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| ||||| ||| ||||||||||| ||| |||| ||  |||||| ||| || ||||||  | |||  |||||||||||| ||||     
T  714120 tttttaaaactcggtatccaatctaagaatcgactaatctgaggggacgaaacccaccgcccatttgcgggggctccgtttaaagtcagagcaaactctc 714219  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  714220 tatggacttagcccaccgaaattg 714243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 8192347 - 8192469
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagc-aagctct 282  Q
    |||| |||||||||||| | ||||||||| ||||||||| ||| || ||||| |||||| |||||| || ||| || ||| |||| |||||| |||||||    
T  8192347 ttttgaaaactcggtatccgatccaaggaccgactaatccgaggggcccaatcccaccgcccacttgcgaggggcc-gttctaagccagagcaaagctct 8192445  T
Q  283 gtatggacttgcccaccgaaattg 306  Q
     |||||||||||||||||| ||||    
T  8192446 atatggacttgcccaccgacattg 8192469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 19174964 - 19174842
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaa-gctct 282  Q
    ||||||||| ||||||| | ||||||||| ||| ||||| ||| ||| |||| |||||| ||| |||||||| ||| ||| |||| |||||||| |||||    
T  19174964 tttttaaaattcggtatccgatccaaggaccgattaatccgaggggatcaatcccaccgcccatttacggggctcc-gttctaagccagagcaaagctct 19174866  T
Q  283 gtatggacttgcccaccgaaattg 306  Q
    |||||||| | |||||||||||||    
T  19174865 gtatggacctacccaccgaaattg 19174842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 305
Target Start/End: Complemental strand, 24196204 - 24196084
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| ||||| ||  ||||||||||| ||| |||||||| |||||| |||||| |||||  || |||  ||| ||||||||| ||||    
T  24196204 ttttgaaaactcggtatccaatcaaaaaatcgactaatccgaggggaccaatcccaccgcccacttgcgggg--cccgtttaaagccagagcaagttctg 24196107  T
Q  284 tatggactt-gcccaccgaaatt 305  Q
    ||||||||| |||||||||||||    
T  24196106 tatggacttagcccaccgaaatt 24196084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 28669075 - 28668952
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||  ||||||||||| ||| |||||||| |||||| ||||||  ||||| || |||  ||| || |||||||||||    
T  28669075 ttttgaaaactcggtatccgatccaaaaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccaaagcaagctctg 28668976  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| | ||||||||||||    
T  28668975 tatggacttagtccaccgaaattg 28668952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 2140476 - 2140605
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggt-cctgttataagtcagagcaa 277  Q
    |||| |||| |||||||||||| | ||||||  ||||||||||| ||| |||||||| |||||| |||||| ||||||  ||  ||  ||| ||||||||    
T  2140476 attttttttgaaaactcggtatccgatccaataatcgactaatccgaggggaccaatcccaccgcccacttgcgggggggcccatttaaagccagagcaa 2140575  T
Q  278 gctctgtatggacttgcccaccgaaattgacac 310  Q
    ||||||||||||||   ||||||||||||||||    
T  2140576 gctctgtatggact---ccaccgaaattgacac 2140605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 184 - 305
Target Start/End: Original strand, 34516409 - 34516530
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||| ||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| | |||| || |||  |||  |||||||||||||    
T  34516409 ttttgaaaacttggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcagggg-cccgtttaaagcgagagcaagctctg 34516507  T
Q  284 tatggactt-gcccaccgaaatt 305  Q
    ||||||||| |||||||||||||    
T  34516508 tatggacttagcccaccgaaatt 34516530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 36390569 - 36390686
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatgg 288  Q
    |||||||||||| | || |||| ||||||| ||| ||| |||||||| |||||| |||||| |||||||||  ||  ||||||||||||||| |||||||    
T  36390569 aaaactcggtatccgattcaagtatcgactgatccgag-ggaccaatcccaccgcccacttgcgggggtcccatttaaagtcagagcaagctttgtatgg 36390667  T
Q  289 actt-gcccaccgaaattg 306  Q
    |||| | ||||||||||||    
T  36390668 acttagtccaccgaaattg 36390686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 312
Target Start/End: Complemental strand, 19850034 - 19849906
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||||||||||| |||| | ||||||| ||||| ||||  ||||||||||||  ||||| |||||| |||||| ||||||  ||| ||||||||||||||    
T  19850034 tttttaaaactcagtat-cgatccaagaatcgattaatttgagaggaccaatctcaccgcccacttgcgggggccctgtttaaagccagagcaagctctg 19849936  T
Q  284 tatggactt-gcccaccgaaattgacacta 312  Q
    ||| ||||| | ||| | ||||||||||||    
T  19849935 tatagacttagtccatcaaaattgacacta 19849906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 310
Target Start/End: Complemental strand, 5394219 - 5394092
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||| ||||||| | ||| ||||| ||||||||| ||  |||||||| |||||| |||||| ||| || ||  ||  |||||||||||| |||||    
T  5394219 ttttgaaaattcggtatccgatctaaggaccgactaatccgaacggaccaatcccaccgcccacttgcggcggccccatttaaagtcagagcaaactctg 5394120  T
Q  284 tatggactt-gcccaccgaaattgacac 310  Q
    ||||||||| ||||| ||||||||||||    
T  5394119 tatggacttagcccatcgaaattgacac 5394092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 29698352 - 29698222
Alignment:
Q  180 tttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagag-caag 278  Q
    |||||| |||||||||||||| | ||| ||||| | ||| ||  ||| ||||||||  || || ||| || | ||||||||||| ||||||||||  |||    
T  29698352 tttcttcttaaaactcggtatacgatctaaggaccaacttattcgaggggaccaatctcatcgcccatttgc-ggggtcctgttttaagtcagagtaaag 29698254  T
Q  279 ctctgtatggacttgcccaccgaaattgacac 310  Q
    ||||||||| ||||||||||||||||||||||    
T  29698253 ctctgtatgaacttgcccaccgaaattgacac 29698222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 310
Target Start/End: Original strand, 36242327 - 36242434
Alignment:
Q  204 atccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaa 302  Q
    ||||||| ||||| ||||| ||| |||||||| |||||| |||||| |||||  || |||  ||| ||||||||||||||  ||||||| ||||||||||    
T  36242327 atccaagaatcgattaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagccagagcaagctctggctggacttagcccaccgaa 36242426  T
Q  303 attgacac 310  Q
    ||||||||    
T  36242427 attgacac 36242434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 44929841 - 44929916
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcc 259  Q
    ||||||||||||||||| | ||||||| ||||||||||   || |||||||| ||||||||||||| |||||||||    
T  44929841 tttttaaaactcggtatccgatccaagaatcgactaattcaaggggaccaatcccaccgtccacttgcgggggtcc 44929916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 189 - 306
Target Start/End: Complemental strand, 1191710 - 1191592
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatgg 288  Q
    |||| |||||||||  |||||| ||||||||||  ||| ||| |||||||||||| ||||| |||||   | |||  ||| |||||||| ||||||||||    
T  1191710 aaaattcggtattcggtccaagaatcgactaattcgaggggaacaattccaccgttcactttcggggacaccgtttaaagccagagcaaactctgtatgg 1191611  T
Q  289 actt-gcccaccgaaattg 306  Q
    |||| ||||||||||||||    
T  1191610 acttagcccaccgaaattg 1191592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 3675700 - 3675642
Alignment:
Q  186 tttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtc 244  Q
    ||||||||| ||||||||||||||||||||||||||| |||| | ||||| ||||||||    
T  3675700 tttaaaacttggtattcaatccaaggatcgactaatccgagaagtccaatcccaccgtc 3675642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 18692162 - 18692080
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttata 266  Q
    |||| |||||||||||| | ||||||| ||||||||||  ||| |||||||| |||||| ||||||  |||||||||||||||    
T  18692162 ttttgaaaactcggtatccgatccaagaatcgactaatacgaggggaccaatcccaccgcccacttgtgggggtcctgttata 18692080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 184 - 302
Target Start/End: Complemental strand, 19054228 - 19054108
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacggggg--tcctgttataagtcagagcaagctc 281  Q
    |||| ||||||||||||   ||||||| ||||||||||| ||| |||||||| |||||| |||||| ||||||  |||  ||| ||| || |||||||||    
T  19054228 ttttgaaaactcggtatctgatccaagaatcgactaatccgagcggaccaatcccaccgcccacttgcggggggttccattta-aagccaaagcaagctc 19054130  T
Q  282 tgtatggactt-gcccaccgaa 302  Q
    ||||||||||| ||||||||||    
T  19054129 tgtatggacttagcccaccgaa 19054108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 256
Target Start/End: Complemental strand, 25293361 - 25293289
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacggggg 256  Q
    ||||||||||||||||| | ||||||| ||||||||||| ||| |||||||| ||| || |||||| ||||||    
T  25293361 tttttaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccatcgcccacttgcggggg 25293289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 4852731 - 4852660
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggg 255  Q
    ||||||||||| || || | ||||||| ||||| ||||| ||| |||||||||||||||||||||| |||||    
T  4852731 tttttaaaacttggcatccgatccaagaatcgattaatccgaggggaccaattccaccgtccacttgcgggg 4852660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 17324966 - 17324845
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||| ||| | ||| ||| ||||||||||  ||| |||| ||| |||||| ||||||  ||||| ||  ||| ||| ||||||||||||||    
T  17324966 tttttaaaactcgatatccgatc-aagaatcgactaatttgaggggactaatcccaccgcccacttgtgggggcccattta-aagccagagcaagctctg 17324869  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  17324868 tatggacttagcccaccgaaattg 17324845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 6714295 - 6714365
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcc 259  Q
    |||||||||||| ||||||||| ||||||||||  ||| ||||||||  |||||||||||| |||| ||||    
T  6714295 aaaactcggtatccaatccaagaatcgactaatttgaggggaccaatctcaccgtccacttgcgggagtcc 6714365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 14487027 - 14486962
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccactt 249  Q
    |||| |||||||||||| | ||||||||| ||||||||| ||| |||||||| |||||| ||||||    
T  14487027 ttttgaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccactt 14486962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 3943942 - 3943819
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||| ||||| | ||||||  | |||||||||  || |||||||| |||||  |||||| |||| | || |||  ||| ||||||||||||||    
T  3943942 ttttgaaaacttggtatccgatccaataaccgactaatccaaggggaccaatcccaccacccacttgcgggagccccgtttaaagccagagcaagctctg 3943843  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||| ||||||||||    
T  3943842 tatggacttagccaaccgaaattg 3943819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 12543345 - 12543215
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaa-gctct 282  Q
    ||||| ||||||||| | | || |||||| ||||||||   || ||| |||| ||||| ||||||| |||||| ||| || |||   ||||||| |||||    
T  12543345 ttttttaaactcggtctccgattcaaggaccgactaattcaaggggagcaatcccaccatccacttgcgggggccct-ttctaaactagagcaaagctct 12543247  T
Q  283 gtatggacttgcccaccgaaattgacactaga 314  Q
    ||||||||||||||||| |||||| |||||||    
T  12543246 gtatggacttgcccaccaaaattggcactaga 12543215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 31778228 - 31778161
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacggggg 256  Q
    |||||||||||| | ||||||| |  |||||||| ||||||||||||  |||||||||||| ||||||    
T  31778228 aaaactcggtatccgatccaagaactgactaatctgagaggaccaatctcaccgtccacttgcggggg 31778161  T

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Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 305
Target Start/End: Original strand, 19605841 - 19605962
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag-ctct 282  Q
    ||||||||||||| ||| | |||||||  || ||||||  ||| ||||||||  ||||| ||||||  |||   ||| || ||||| |||||||| ||||    
T  19605841 tttttaaaactcgatatccgatccaagtgtcaactaattcgaggggaccaatctcaccgcccacttgtgggccccct-ttctaagtgagagcaagactct 19605939  T
Q  283 gtatggacttgcccaccgaaatt 305  Q
    |||||||||||||||||||||||    
T  19605940 gtatggacttgcccaccgaaatt 19605962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 306
Target Start/End: Complemental strand, 27290729 - 27290667
Alignment:
Q  245 cacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaaattg 306  Q
    ||||| |||||| || |||  ||| ||||||||||||||||||||||| ||||||||||||||    
T  27290729 cacttgcggggggcccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattg 27290667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 39957965 - 39957895
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccactt 249  Q
    |||| |||| |||||||||||| ||||||||| ||||||||||| ||| | |||||| ||| || ||||||    
T  39957965 attttttttgaaaactcggtatccaatccaagaatcgactaatccgagggaaccaatcccatcgcccactt 39957895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 5608111 - 5608156
Alignment:
Q  266 aagtcagagcaagctctgtatggactt-gcccaccgaaattgacac 310  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  5608111 aagtcagagcaagctctatatggacttagcccaccaaaattgacac 5608156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 13747495 - 13747560
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccactt 249  Q
    |||| |||| ||||||| | |||||||||||||| |||| ||| || ||||| |||||||||||||    
T  13747495 ttttgaaaattcggtatccgatccaaggatcgacaaatctgaggggcccaatcccaccgtccactt 13747560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 292
Target Start/End: Complemental strand, 4769340 - 4769260
Alignment:
Q  212 atcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt 292  Q
    ||||||||||  ||| |||||||   |||||||||||| |||||  || |||  ||| |||||||||||||||||||||||    
T  4769340 atcgactaatttgaggggaccaacctcaccgtccacttgcggggcccccgtttaaagccagagcaagctctgtatggactt 4769260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 8024659 - 8024730
Alignment:
Q  177 agatttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccactt 249  Q
    |||||| ||||||||| ||| ||| ||||||||||| ||||||||  ||||||||||||  |||| |||||||    
T  8024659 agatttttttttaaaa-tcgatatccaatccaaggaccgactaatttgagaggaccaatctcaccatccactt 8024730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 306
Target Start/End: Original strand, 10582072 - 10582108
Alignment:
Q  271 agagcaagctctgtatggactt-gcccaccgaaattg 306  Q
    |||||||||||||||||||||| ||||||||||||||    
T  10582072 agagcaagctctgtatggacttagcccaccgaaattg 10582108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 306
Target Start/End: Original strand, 28194223 - 28194251
Alignment:
Q  278 gctctgtatggacttgcccaccgaaattg 306  Q
    |||||||||||||||||||||||||||||    
T  28194223 gctctgtatggacttgcccaccgaaattg 28194251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 306
Target Start/End: Complemental strand, 40591290 - 40591262
Alignment:
Q  278 gctctgtatggacttgcccaccgaaattg 306  Q
    |||||||||||||||||||||||||||||    
T  40591290 gctctgtatggacttgcccaccgaaattg 40591262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 292
Target Start/End: Complemental strand, 41330044 - 41329937
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| |  |||||| | ||||||||| ||| ||||||||  ||||| ||||||  ||||| ||  ||  ||| |||||||||||||     
T  41330044 tttttaaaactcggtatccggtccaagaaccgactaatctgaggggaccaatctcaccgcccacttgtgggggccccatttaaagccagagcaagctct- 41329946  T
Q  284 tatggactt 292  Q
    |||||||||    
T  41329945 tatggactt 41329937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 256
Target Start/End: Original strand, 43374325 - 43374397
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacggggg 256  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||  |||||||| ||||||  ||||| ||||||    
T  43374325 ttttgaaaactcggtatccgatccaagaatcgactaatccgaagggaccaatcccaccgctcacttgcggggg 43374397  T

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Target: scaffold0026 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 97361 - 97484
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| |  |||||  | ||||||||  |||||||||||| |||||| |||||| ||||||||| |||  ||||||||||||||||||    
T  97361 tttttaaaactcggtatccggtccaaaaaccgactaatacgagaggaccaatcccaccgcccacttgcgggggtcccgtttaaagtcagagcaagctctg 97460  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  97461 tatggacttagcccaccgaaattg 97484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 6033 - 5968
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccactt 249  Q
    ||||||||| ||| |||  |||||||||| ||||||||| |||  ||||||| |||||||||||||    
T  6033 tttttaaaattcgatatctaatccaaggaccgactaatctgaggtgaccaatcccaccgtccactt 5968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 34844753 - 34844876
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  34844753 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 34844852  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  34844853 tatggacttagcccaccgaaattg 34844876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 45787699 - 45787822
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||  ||| |||||||| ||||||||||||| |||||| ||||||  ||| ||||||||||||||    
T  45787699 ttttgaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccctgtttaaagccagagcaagctctg 45787798  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| |||||| |||||||    
T  45787799 tatggacttagcccactgaaattg 45787822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 40058852 - 40058970
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatgg 288  Q
    |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| |||||||||||||||||||    
T  40058852 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgg 40058951  T
Q  289 actt-gcccaccgaaattg 306  Q
    |||| ||||||||||||||    
T  40058952 acttagcccaccgaaattg 40058970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 184 - 312
Target Start/End: Complemental strand, 32990637 - 32990508
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| ||||||| |||||| ||||||| |||||||| || ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  32990637 ttttgaaaactcagtattcgatccaagaatcgactagtccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 32990538  T
Q  284 tatggactt-gcccaccgaaattgacacta 312  Q
    ||||||||| |||||||||||||| |||||    
T  32990537 tatggacttagcccaccgaaattggcacta 32990508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 5609197 - 5609320
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| ||| |||| ||||||||||||| |||||| ||  ||  ||| ||||||||||||||    
T  5609197 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgtccacttgcgggggccccatttaaagccagagcaagctctg 5609296  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  5609297 tatggacttagcccaccgaaattg 5609320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 32986399 - 32986276
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| |||||||| || ||| |||||||| |||||| |||||| |||||| ||  ||  ||||||||||||||||||    
T  32986399 ttttgaaaactcggtatccgatccaagaatcgactattccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagtcagagcaagctctg 32986300  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  32986299 tatggacttagcccaccgaaattg 32986276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 34724001 - 34723878
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| |||||||||||| |||||  |||||| |||||| || |||  ||| ||||||||||| ||    
T  34724001 ttttaaaaactcggtatccgatccaagaatcgactaatccgagaggaccaatcccaccacccacttgcgggggccccgtttaaagccagagcaagctttg 34723902  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  34723901 tatggacttagcccaccgaaattg 34723878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 305
Target Start/End: Original strand, 19660527 - 19660649
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| ||| |||| |||||| |||||| |||||| ||||||  ||| ||||||||||||||    
T  19660527 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctg 19660626  T
Q  284 tatggactt-gcccaccgaaatt 305  Q
    |||||||||  ||||||||||||    
T  19660627 tatggacttatcccaccgaaatt 19660649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 190 - 306
Target Start/End: Complemental strand, 52983815 - 52983698
Alignment:
Q  190 aaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatgga 289  Q
    ||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||||||||    
T  52983815 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 52983716  T
Q  290 ctt-gcccaccgaaattg 306  Q
    ||| |||||| |||||||    
T  52983715 cttagcccactgaaattg 52983698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 306
Target Start/End: Original strand, 20077986 - 20078102
Alignment:
Q  191 aactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggac 290  Q
    |||||||||| | ||||||| ||||||||||| ||| | || ||| |||||| ||||||||||||| || |||  ||| |||||||||||||||||||||    
T  20077986 aactcggtatccgatccaagaatcgactaatccgagggaactaatcccaccgcccacttacgggggccccgtttaaagccagagcaagctctgtatggac 20078085  T
Q  291 tt-gcccaccgaaattg 306  Q
    || ||||||||||||||    
T  20078086 ttagcccaccgaaattg 20078102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 20566552 - 20566429
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||| ||| | ||||||| ||||||||||| ||| |||||||| ||| || |||||| ||||||  | |||  ||| ||||||||||||||    
T  20566552 tttttaaaactcgatatccgatccaagaatcgactaatctgaggggaccaatcccagcgcccacttgcgggggctccgtttaaagccagagcaagctctg 20566453  T
Q  284 tatggac-ttgcccaccgaaattg 306  Q
    ||||||| ||||||||||||||||    
T  20566452 tatggactttgcccaccgaaattg 20566429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 27528790 - 27528913
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| ||||||||  ||||| |||||| |||||| || ||   ||| ||||||||||||||    
T  27528790 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatctcaccgcccacttgcgggggccccgtataaagccagagcaagctctg 27528889  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  27528890 tatggacttagcccaccgaaattg 27528913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 33696274 - 33696397
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||| ||| | ||||||| || |||||||| ||||||||||||  ||||| |||||| |||||| ||  ||  ||| ||||||||||||||    
T  33696274 tttttaaaactcgatatccgatccaagaattgactaatccgagaggaccaatctcaccgcccacttgcgggggccccatttaaagccagagcaagctctg 33696373  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  33696374 tatggacttagcccaccgaaattg 33696397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 36131533 - 36131628
Alignment:
Q  212 atcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaaattg 306  Q
    ||||||||||| ||| |||||||| |||||| |||||||||||||||| |||  |||||| |||||||||||||||||||| | ||||||||||||    
T  36131533 atcgactaatccgaggggaccaatcccaccgcccacttacgggggtcccgtttaaagtcatagcaagctctgtatggacttaggccaccgaaattg 36131628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 305
Target Start/End: Complemental strand, 44343716 - 44343594
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | || |||| ||||||||||  ||| |||||||| |||||| |||||| |||| | || |||  ||||||||||||||||||    
T  44343716 ttttgaaaactcggtatccgattcaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagtcagagcaagctctg 44343617  T
Q  284 tatggactt-gcccaccgaaatt 305  Q
    ||||||||| ||||||| |||||    
T  44343616 tatggacttagcccaccaaaatt 44343594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 25852417 - 25852293
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttat-aagtcagagcaagctct 282  Q
    ||||||||||||||||| |  |||||| | ||||||||| ||| |||||||| |||  | |||||| || |||||| ||| | ||| |||||||||||||    
T  25852417 tttttaaaactcggtatccggtccaagaaccgactaatccgaggggaccaatcccattgcccacttgcgagggtcccgttttaaagccagagcaagctct 25852318  T
Q  283 gtatggactt-gcccaccgaaattg 306  Q
    |||||||||| ||||||||||||||    
T  25852317 gtatggacttagcccaccgaaattg 25852293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 54127337 - 54127460
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| ||||||| |||| |  |||||| | ||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  54127337 ttttgaaaactcagtatccggtccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 54127436  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||| ||||| ||||||||||||||    
T  54127437 tatagacttagcccaccgaaattg 54127460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 306
Target Start/End: Complemental strand, 46714590 - 46714472
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatgg 288  Q
    |||||||||||| | || |||| || |||||||| ||| |||||||| |||||| |||||| |||||| || |||  |||  || |||||||||||||||    
T  46714590 aaaactcggtatccgattcaagaattgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcaagggcaagctctgtatgg 46714491  T
Q  289 actt-gcccaccgaaattg 306  Q
    |||| ||||||||||||||    
T  46714490 acttagcccaccgaaattg 46714472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 35229370 - 35229246
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggt-cctgttataagtcagagcaagctct 282  Q
    ||||||||| ||||||| | ||||||| ||||||||||  ||| |||||||| ||||||  |||||  |||||  || |||  ||||||||||||||| |    
T  35229370 tttttaaaattcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgctcacttgtggggggacccgtttaaagtcagagcaagctat 35229271  T
Q  283 gtatggactt-gcccaccgaaattg 306  Q
    |||||||||| ||||||||||||||    
T  35229270 gtatggacttagcccaccgaaattg 35229246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 39288979 - 39288935
Alignment:
Q  265 taagtcagagcaagctctgtatggacttgcccaccgaaattgaca 309  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  39288979 taagccagagcaagctctgtatggacttgcccaccgaaattgaca 39288935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 9517656 - 9517759
Alignment:
Q  204 atccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaa 302  Q
    ||||||| ||||||||||| ||| ||||||||  ||||  |||| | |||||| || |||  ||||||||||||||||||||||||||| |||||| |||    
T  9517656 atccaagaatcgactaatccgaggggaccaatctcaccacccacctgcgggggccccgtttaaagtcagagcaagctctgtatggacttagcccactgaa 9517755  T
Q  303 attg 306  Q
    ||||    
T  9517756 attg 9517759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 32942572 - 32942449
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||| ||| ||||| | ||||||||| ||||| | ||| ||| |||||||| |||||||||||||  |||||  | |||  ||| ||||| ||||||||    
T  32942572 ttttttaaattcggtttccaatccaagaatcgatttatccgaggggaccaatcccaccgtccacttgtgggggggccgtttaaagccagagtaagctctg 32942473  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  32942472 tatggacttagcccaccgaaattg 32942449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 7391960 - 7392081
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| ||||| ||| | ||||||||| ||| ||| |||| |||||| |||| || ||||||||  ||  ||| |||||||| |||||    
T  7391960 ttttgaaaactcggtatccaatcgaagaaccgactaatccgaggggaacaatcccaccgcccac-tatgggggtcccatttaaagccagagcaaactctg 7392058  T
Q  284 tatggacttgcccaccgaaattg 306  Q
    |||||||||  ||||||||||||    
T  7392059 tatggacttaaccaccgaaattg 7392081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 25969498 - 25969618
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||| |||||| |||| | || |||| ||||||||||  ||| |||||||| ||||||  |||||||||||| ||  ||| ||| ||||||||| ||||    
T  25969498 ttttttaaactcagtatccgattcaagaatcgactaattcgag-ggaccaatcccaccgctcacttacgggggcccgttta-aagccagagcaagttctg 25969595  T
Q  284 tatggacttgcccaccgaaattg 306  Q
    |||||||||| ||||||||||||    
T  25969596 tatggacttggccaccgaaattg 25969618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 51595224 - 51595130
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag 278  Q
    ||||||||||||||||| | ||||||| ||||| ||||| ||   || |||||||||||||||||| ||||| ||| |||  |||||||||||||    
T  51595224 tttttaaaactcggtatccgatccaagaatcgattaatccgaagagatcaattccaccgtccacttgcggggatcccgtttaaagtcagagcaag 51595130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 21387487 - 21387609
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatgg 288  Q
    |||||| ||||| | ||||||  ||||||||||| ||| ||||||   |||||| |||||| ||||| ||| |||  ||| ||||||||||||||||| |    
T  21387487 aaaacttggtatccgatccaataatcgactaatccgaggggaccac--ccaccgcccacttgcggggatcccgtttaaagccagagcaagctctgtatag 21387584  T
Q  289 actt-gcccaccgaaattgacacta 312  Q
    |||| ||||||| ||||||||||||    
T  21387585 acttagcccaccaaaattgacacta 21387609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 23639821 - 23639761
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccactt 249  Q
    |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||||||||||    
T  23639821 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccactt 23639761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 23645479 - 23645419
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccactt 249  Q
    |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||||||||||    
T  23645479 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccactt 23645419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 314
Target Start/End: Complemental strand, 13550410 - 13550279
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||| |||||||||| || ||||||| ||||| ||||| ||| ||||| || | |||| ||||||  ||||  || |||  ||| ||||| |||||| |    
T  13550410 ttttttaaactcggtaatcgatccaagaatcgattaatccgaggggacctatcctaccgcccacttgtggggaccccgtttaaagccagagtaagctcgg 13550311  T
Q  284 tatggactt-gcccaccgaaattgacactaga 314  Q
    ||||||||| |||||||||||||| |||||||    
T  13550310 tatggacttagcccaccgaaattggcactaga 13550279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 55961749 - 55961871
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||| ||||||||| || |||| ||||| ||||| ||  | |||||| |||||| ||||||  ||||  ||  ||| ||||||||||||||||||    
T  55961749 ttttgaaaattcggtattcgattcaagaatcgattaatccgaaggaaccaatcccaccgcccacttgtggggccccgttta-aagtcagagcaagctctg 55961847  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  55961848 tatggacttagcccaccgaaattg 55961871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 52494694 - 52494625
Alignment:
Q  180 tttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccactt 249  Q
    |||||| |||||||||||||| | ||||||| ||||||||||  ||| |||||||| |||||| ||||||    
T  52494694 tttcttcttaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccactt 52494625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 292
Target Start/End: Original strand, 12500054 - 12500161
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| |  |||||| || |||||||| ||||| | |||||  |||| |||||| ||||||||| |||  ||| ||||||||||| ||    
T  12500054 ttttaaaaactcggtatccggtccaagaattgactaatccgagag-atcaattttaccgcccacttgcgggggtcccgtttaaagccagagcaagctatg 12500152  T
Q  284 tatggactt 292  Q
    |||||||||    
T  12500153 tatggactt 12500161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 18875597 - 18875637
Alignment:
Q  270 cagagcaagctctgtatggactt-gcccaccgaaattgaca 309  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  18875597 cagagcaagctctgtatggacttagcccaccgaaattgaca 18875637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 35674791 - 35674859
Alignment:
Q  239 accgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaaattg 306  Q
    |||| |||||| |||||| || |||  ||| ||||||||||||||||||||||| ||||||||||||||    
T  35674791 accgcccacttgcgggggccccgtttaaaggcagagcaagctctgtatggacttagcccaccgaaattg 35674859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 256
Target Start/End: Original strand, 43719082 - 43719154
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacggggg 256  Q
    |||| |||| ||||||| | ||||||| ||||||||||| |||| ||||||| |||||| |||||| ||||||    
T  43719082 ttttgaaaattcggtatccgatccaagaatcgactaatccgagatgaccaatcccaccgcccactttcggggg 43719154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 13873318 - 13873413
Alignment:
Q  212 atcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaaattg 306  Q
    |||||||||||  |||||| ||||||||||  |||||| |||||| ||||||  |||  ||||||| ||||||||| |||| ||| ||||||||||    
T  13873318 atcgactaatcccagaggatcaattccaccacccacttgcgggggccctgtttgaagctagagcaaactctgtatgaacttagcctaccgaaattg 13873413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 352
Target Start/End: Original strand, 19660699 - 19660729
Alignment:
Q  322 atcccaagccaaccactaggccaactccaaa 352  Q
    |||||||||||||||||||||||||||||||    
T  19660699 atcccaagccaaccactaggccaactccaaa 19660729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 7093573 - 7093504
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgg 253  Q
    ||||||||||||| ||| | ||||||||| ||||||||  ||  |||||||| |||||| ||||||||||    
T  7093573 tttttaaaactcgatatccgatccaaggaccgactaattcgaagggaccaatcccaccgcccacttacgg 7093504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 313
Target Start/End: Original strand, 13716486 - 13716575
Alignment:
Q  225 agaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaa-gctctgtatggacttgcccaccgaaattgacactag 313  Q
    ||||||||||| |||||| |||||| || ||| ||||||  ||| || ||||| | || |||||||||||||||| ||||||| ||||||    
T  13716486 agaggaccaatcccaccgcccacttgcgagggccctgtttaaagacatagcaaagttccgtatggacttgcccactgaaattggcactag 13716575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 29875852 - 29875893
Alignment:
Q  266 aagtcagagcaagctctgtatggactt-gcccaccgaaattg 306  Q
    |||||||| |||||||||||||||||| ||||||||||||||    
T  29875852 aagtcagaacaagctctgtatggacttagcccaccgaaattg 29875893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 33289256 - 33289191
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccactt 249  Q
    |||||||||| |||||| | ||||||| ||||||||||| ||| |||| |||  ||||||||||||    
T  33289256 tttttaaaacccggtatccgatccaagaatcgactaatccgaggggactaatctcaccgtccactt 33289191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 255
Target Start/End: Original strand, 20527024 - 20527100
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggg 255  Q
    |||| ||||| ||||||||||||  ||||||  ||||||||||| |||  ||||||| | |||| ||||||||||||    
T  20527024 attttttttttaaactcggtatttgatccaaaaatcgactaatccgaggagaccaatcctaccgcccacttacgggg 20527100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 33992773 - 33992705
Alignment:
Q  239 accgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaaattg 306  Q
    |||| |||||| |||||| || |||  ||| ||||||||||| ||||||||||| ||||||||||||||    
T  33992773 accgcccacttgcgggggccccgtttaaagccagagcaagctatgtatggacttagcccaccgaaattg 33992705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 8e-25; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 185 - 306
Target Start/End: Complemental strand, 24122224 - 24122102
Alignment:
Q  185 ttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgt 284  Q
    |||||||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||| | || |||  ||| |||||||||||||||    
T  24122224 ttttaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagcaagctctgt 24122125  T
Q  285 atggactt-gcccaccgaaattg 306  Q
    |||||||| ||||||||||||||    
T  24122124 atggacttagcccaccgaaattg 24122102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 170 - 314
Target Start/End: Complemental strand, 17935985 - 17935840
Alignment:
Q  170 cataattagatttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagt 269  Q
    |||||||  |||| ||||| ||||||||||| | ||||||| ||||||||||| ||| |||||||| ||| || |||||| |||||| || |||  |||     
T  17935985 cataattttattttttttttaaactcggtatccgatccaagaatcgactaatccgagtggaccaatcccatcgcccacttgcgggggccccgtttaaagc 17935886  T
Q  270 cagagcaagctctgtatggactt-gcccaccgaaattgacactaga 314  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||    
T  17935885 cagagcaaactctgtatggacttagcccaccgaaattggcactaga 17935840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 179 - 306
Target Start/End: Original strand, 4621227 - 4621355
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag 278  Q
    |||| |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||  || |||  ||| |||||||||    
T  4621227 attttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagccagagcaag 4621326  T
Q  279 ctctgtatggactt-gcccaccgaaattg 306  Q
    |||||||||||||| ||||||||||||||    
T  4621327 ctctgtatggacttagcccaccgaaattg 4621355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 179 - 305
Target Start/End: Original strand, 7766717 - 7766844
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag 278  Q
    |||| |||| |||||||| ||| | || |||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  |||||||||||||    
T  7766717 attttttttgaaaactcgatatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagtcagagcaag 7766816  T
Q  279 ctctgtatggactt-gcccaccgaaatt 305  Q
    |||||||||||||| |||||||||||||    
T  7766817 ctctgtatggacttagcccaccgaaatt 7766844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 24674595 - 24674472
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||| ||||||| | ||||||| ||||||||||  ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  24674595 tttttaaaattcggtatccgatccaagaatcgactaatacgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 24674496  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  24674495 tatggacttagcccaccgaaattg 24674472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 314
Target Start/End: Original strand, 25237008 - 25237115
Alignment:
Q  208 aaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaag-ctctgtatggacttgcccaccgaaattg 306  Q
    ||||| ||||||||  |||||||||||||||||||||||||| ||| ||  |  || |||||||||||||  ||||||||||||||||||||||||||||    
T  25237008 aaggaccgactaatatgagaggaccaattccaccgtccacttgcggaggcaccattctaagtcagagcaaaactctgtatggacttgcccaccgaaattg 25237107  T
Q  307 acactaga 314  Q
     |||||||    
T  25237108 gcactaga 25237115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 306
Target Start/End: Complemental strand, 1486617 - 1486497
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttac--gggggtcctgttataagtcagagc-aagctctgta 285  Q
    |||||||||||| | ||||||||| ||||||||| ||| ||||| || ||||||||||||| |  ||||| || ||| ||||||||||| ||||||||||    
T  1486617 aaaactcggtatccgatccaaggaccgactaatcggaggggaccgatcccaccgtccacttgcgggggggccccgttctaagtcagagcaaagctctgta 1486518  T
Q  286 tggacttgcccaccgaaattg 306  Q
    ||||||| |||| ||||||||    
T  1486517 tggacttacccatcgaaattg 1486497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 184 - 310
Target Start/End: Complemental strand, 1379100 - 1378973
Alignment:
Q  184 tttttaaaa-ctcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctct 282  Q
    ||||||||| |||||||| | ||| ||| ||||||||||| ||| ||||||||  |||||||||||| |||||| || |||  ||| ||||||||| |||    
T  1379100 tttttaaaagctcggtatccgatctaagaatcgactaatctgaggggaccaatctcaccgtccacttgcggggg-cccgtttaaagccagagcaagttct 1379002  T
Q  283 gtatggactt-gcccaccgaaattgacac 310  Q
    |||||||||| ||||||||||||||||||    
T  1379001 gtatggacttagcccaccgaaattgacac 1378973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 184 - 292
Target Start/End: Complemental strand, 26820389 - 26820281
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||||||||||||| ||||||||||| ||   || |||||||||| ||||||| | |||||||  ||  ||| ||||||||| ||||    
T  26820389 tttttaaaactcggtattcaatccaagaatcgactaatccgaagcgatcaattccaccatccacttgcaggggtcccatttaaaggcagagcaagttctg 26820290  T
Q  284 tatggactt 292  Q
    |||||||||    
T  26820289 tatggactt 26820281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 46608012 - 46607889
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggt-cctgttataagtcagagcaagctct 282  Q
    |||| |||||||| ||| | ||||||||| ||||||||| ||| ||| |||| |||||| |||||| ||||||  ||| ||| |||||||||||||||||    
T  46608012 ttttgaaaactcgatatccgatccaaggaccgactaatccgaggggatcaatcccaccgcccacttgcgggggggcctttta-aagtcagagcaagctct 46607914  T
Q  283 gtatggactt-gcccaccgaaattg 306  Q
    |||||||||| ||||||||||||||    
T  46607913 gtatggacttagcccaccgaaattg 46607889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 15059397 - 15059520
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||  ||| ||||||||  ||||| |||||| |||||  || |||  ||| ||||||||||||||    
T  15059397 ttttgaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcggggaccccgtttaaagccagagcaagctctg 15059496  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  15059497 tatggacttagcccaccgaaattg 15059520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 32729746 - 32729624
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | |||||| || |||||||||  || ||| |||| |||||| |||||| |||||  ||  ||  ||| ||||||||||||||    
T  32729746 ttttgaaaactcggtatccgatccaaagaccgactaatccaaggggatcaatcccaccgcccacttgcggggaccccatttaaagccagagcaagctctg 32729647  T
Q  284 tatggacttgcccaccgaaattg 306  Q
    |||||||||||||||||||||||    
T  32729646 tatggacttgcccaccgaaattg 32729624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 306
Target Start/End: Complemental strand, 8077841 - 8077726
Alignment:
Q  191 aactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggac 290  Q
    |||||||| | | ||||||  ||||| ||||| ||| |||||||| |||||| |||||| |||||| ||||||  ||| |||||||||||||||||||||    
T  8077841 aactcggtctccgatccaataatcgattaatc-gaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatggac 8077743  T
Q  291 tt-gcccaccgaaattg 306  Q
    || ||||||||||||||    
T  8077742 ttagcccaccgaaattg 8077726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 228 - 314
Target Start/End: Complemental strand, 1138737 - 1138650
Alignment:
Q  228 ggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaa-gctctgtatggacttgcccaccgaaattgacactaga 314  Q
    ||||||||||||| | |||||| |  ||| |||||| ||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  1138737 ggaccaattccactgcccacttgcaagggccctgttctaagtcagagcaaagctctgtatggacttgtccaccgaaattggcactaga 1138650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 30677378 - 30677255
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||| ||| |  |||||| | ||||||||| ||| |||||||| |||||| |||||| |||||||||  ||  ||| || |||||||||||    
T  30677378 ttttgaaaactcgatatccggtccaagaaccgactaatctgaggggaccaatcccaccgcccacttgcgggggtcccatttaaagccaaagcaagctctg 30677279  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  30677278 tatggacttagcccaccgaaattg 30677255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 26513143 - 26513244
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||||| ||||||| ||||||||||| ||| |||||| | |||||| ||||||  ||||| || |||  ||||||||||||||| ||    
T  26513143 tttttaaaactcggtattcgatccaagaatcgactaatccgaggggaccattcccaccgcccacttgtggggg-cccgtttaaagtcagagcaagctttg 26513241  T
Q  284 tat 286  Q
    |||    
T  26513242 tat 26513244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 289
Target Start/End: Complemental strand, 34778541 - 34778436
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||| ||||||||||| | ||||||| |||||||||||  || |||||||| ||||||||||||| |||||| || |||  ||| || ||||| |||||    
T  34778541 ttttttaaactcggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccaaagcaaactctg 34778442  T
Q  284 tatgga 289  Q
    ||||||    
T  34778441 tatgga 34778436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 306
Target Start/End: Original strand, 45331611 - 45331740
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggg-gtcctgttataagtcagagcaa 277  Q
    |||| ||||||||||||||||| | || |||| ||||| ||||| ||| |||  ||| ||||||||||||| ||||| | || |||  ||| || |||||    
T  45331611 atttttttttaaaactcggtatccgattcaagaatcgattaatctgaggggattaatcccaccgtccacttgcggggagccccgtttaaagccaaagcaa 45331710  T
Q  278 gctctgtatggactt-gcccaccgaaattg 306  Q
    ||||||||||||||| ||||||||||||||    
T  45331711 gctctgtatggacttagcccaccgaaattg 45331740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 7578611 - 7578488
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||  ||| ||||||| ||| | |||||| |||||  |||||| || ||| || |||  ||||||||||||||| ||    
T  7578611 ttttgaaaactcggtatccgatccaaaaatcaactaatccgagggaaccaatcccaccacccacttgcgagggccccgtttaaagtcagagcaagctttg 7578512  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  7578511 tatggacttagcccaccgaaattg 7578488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 310
Target Start/End: Original strand, 8254747 - 8254874
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | || |||| ||||||||||   || ||| |||| |||||| |||||| |||||| || |||  ||| ||||||||| ||||    
T  8254747 ttttgaaaactcggtatccgattcaagaatcgactaattcaaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagttctg 8254846  T
Q  284 tatggactt-gcccaccgaaattgacac 310  Q
    |||| |||| ||||||||||||||||||    
T  8254847 tatgaacttagcccaccgaaattgacac 8254874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 16899685 - 16899582
Alignment:
Q  204 atccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagc-aagctctgtatggacttgcccaccgaa 302  Q
    ||||||||| ||||||||| ||| ||||||||  |||||||||||| | |||| || ||| |||  |||||| ||||| |||||||||| ||||||||||    
T  16899685 atccaaggaccgactaatccgaggggaccaatctcaccgtccacttgcaggggccccgttctaaaccagagcaaagctttgtatggactggcccaccgaa 16899586  T
Q  303 attg 306  Q
    ||||    
T  16899585 attg 16899582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 36155883 - 36156006
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||||||| ||||||||||  ||  |||||||| |||||| |||| | |||||| ||||||  ||   | |||||||||||    
T  36155883 tttttaaaactcggtatccgatccaagaatcgactaatttgaagggaccaatcccaccgcccacctgcgggggccctgtttaaaactaaagcaagctctg 36155982  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
     |||||||| ||||||||||||||    
T  36155983 catggacttggcccaccgaaattg 36156006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 7197242 - 7197364
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||| | ||||||||||| ||| ||||||||  ||||| |||||| | |||| |  |||  ||| ||||||||| ||||    
T  7197242 ttttaaaaactcggtatccgatccatgaatcgactaatccgaggggaccaatctcaccgcccacttgcaggggcctcgtttaaagccagagcaaggtctg 7197341  T
Q  284 tatggacttgcccaccgaaattg 306  Q
    ||| ||||| |||||||||||||    
T  7197342 tattgacttacccaccgaaattg 7197364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 27454859 - 27454984
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggt--cctgttataagtcagagcaagctc 281  Q
    |||| |||||| ||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||| | ||||||   || |||  ||| ||||||||||||    
T  27454859 ttttgaaaactaggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacatgcggggggggcccgtttaaagccagagcaagctc 27454958  T
Q  282 tgtatggactt-gcccaccgaaattg 306  Q
    ||||||||||| || |||||||||||    
T  27454959 tgtatggacttagctcaccgaaattg 27454984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 184 - 294
Target Start/End: Original strand, 40802064 - 40802173
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||||| || |||| ||||||||||   |||||||||||  ||||  |||||| |||||  ||  ||| ||||||||||||||||||    
T  40802064 ttttaaaaactcggtattcgattcaagaatcgactaattctagaggaccaatctcaccacccacttgcggggacccgttta-aagtcagagcaagctctg 40802162  T
Q  284 tatggacttgc 294  Q
    |||||||||||    
T  40802163 tatggacttgc 40802173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 23734319 - 23734195
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttac-gggggtcctgttataagtcagagcaagctct 282  Q
    |||| |||||| ||||| | || |||| ||||||||||| ||| ||||||||| ||||| |||||| | ||||| || |||  ||| || ||||| ||||    
T  23734319 ttttgaaaacttggtatccgattcaagaatcgactaatctgaggggaccaatttcaccgcccacttgcggggggccccgtttaaaggcatagcaaactct 23734220  T
Q  283 gtatggactt-gcccaccgaaattg 306  Q
    |||||||||| ||||||||||||||    
T  23734219 gtatggacttagcccaccgaaattg 23734195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 23741511 - 23741387
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttac-gggggtcctgttataagtcagagcaagctct 282  Q
    |||| |||||| ||||| | || |||| ||||||||||| ||| ||||||||| ||||| |||||| | ||||| || |||  ||| || ||||| ||||    
T  23741511 ttttgaaaacttggtatccgattcaagaatcgactaatctgaggggaccaatttcaccgcccacttgcggggggccccgtttaaaggcatagcaaactct 23741412  T
Q  283 gtatggactt-gcccaccgaaattg 306  Q
    |||||||||| ||||||||||||||    
T  23741411 gtatggacttagcccaccgaaattg 23741387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 306
Target Start/End: Complemental strand, 168371 - 168280
Alignment:
Q  216 actaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaaattg 306  Q
    ||||||| ||| |||||||| |||||| |||||  |||| |||| |||  |||||||| ||||||||||||| |||| ||||||||||||||    
T  168371 actaatccgaggggaccaatcccaccggccactagcgggagtcccgtttaaagtcagaacaagctctgtatgaacttagcccaccgaaattg 168280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 8779759 - 8779862
Alignment:
Q  212 atcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaaattgacac 310  Q
    ||||||||||| ||| |||||||| |||||| | ||||  ||||| || |||  |||  |||| ||||| ||||||||||| ||||||||||||||||||    
T  8779759 atcgactaatccgaggggaccaatcccaccgcctacttgtgggggccccgtttaaagctagagtaagctgtgtatggacttagcccaccgaaattgacac 8779858  T
Q  311 taga 314  Q
    ||||    
T  8779859 taga 8779862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 27159282 - 27159215
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacggggg 256  Q
    |||||||| ||| | |||||| |||||||||||| ||| |||||||| ||||||||||||| ||||||    
T  27159282 aaaactcgatatccgatccaaagatcgactaatctgaggggaccaatcccaccgtccacttgcggggg 27159215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 259
Target Start/End: Complemental strand, 35138190 - 35138115
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcc 259  Q
    ||||||||||||||||| | ||||||||| ||||||||| ||| | | |||| |||||| |||||| |||||||||    
T  35138190 tttttaaaactcggtatccgatccaaggaccgactaatccgagggaatcaatcccaccgcccacttgcgggggtcc 35138115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 9500355 - 9500473
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatgg 288  Q
    |||||||| ||| | ||||||| ||||||||||| ||   |||||||  ||||| ||||||  |||||  | |||  ||| |||||||||||||||||||    
T  9500355 aaaactcgatatccgatccaagaatcgactaatccgaagagaccaatctcaccgcccacttgtgggggctccgtttaaagccagagcaagctctgtatgg 9500454  T
Q  289 actt-gcccaccgaaattg 306  Q
    |||| ||||||||||||||    
T  9500455 acttagcccaccgaaattg 9500473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 282
Target Start/End: Complemental strand, 22910073 - 22909975
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctct 282  Q
    |||| |||||||||||| | ||| ||| ||||||||||| ||| |||| ||| |||||| |||||| ||||||  | |||  |||||||||||||||||    
T  22910073 ttttgaaaactcggtatccgatcgaagtatcgactaatccgaggggacaaatcccaccgcccacttgcgggggctccgtttaaagtcagagcaagctct 22909975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 291
Target Start/End: Original strand, 12876965 - 12877038
Alignment:
Q  218 taatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggact 291  Q
    ||||| ||| |||||||| ||||||||||||| |||||| || |||  |||  |||||||||||||||||||||    
T  12876965 taatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagctagagcaagctctgtatggact 12877038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 23041728 - 23041659
Alignment:
Q  180 tttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccactt 249  Q
    |||||| |||||||||||||| | ||||||| ||||||||||  ||| |||||||| |||| ||||||||    
T  23041728 tttcttcttaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccactgtccactt 23041659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 37351448 - 37351513
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccactt 249  Q
    ||||| ||||||||||| | ||||||||| ||||||||| ||| |||||||| |||||| ||||||    
T  37351448 ttttttaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccactt 37351513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 307
Target Start/End: Original strand, 33905505 - 33905629
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||| ||| |||||  |||  ||| ||| |||| ||||||||||||||||| || || |||  ||| |||| ||| |||||    
T  33905505 ttttgaaaactcggtatccgatcaaagaatcgataaatttgaggggatcaatcccaccgtccacttacggaggccccgtttaaagccagaacaaactctg 33905604  T
Q  284 tatggactt-gcccaccgaaattga 307  Q
    |||||||||  ||||||||||||||    
T  33905605 tatggacttaacccaccgaaattga 33905629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 313
Target Start/End: Complemental strand, 809325 - 809294
Alignment:
Q  282 tgtatggacttgcccaccgaaattgacactag 313  Q
    ||||||||||||||||||||||||||||||||    
T  809325 tgtatggacttgcccaccgaaattgacactag 809294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 310
Target Start/End: Original strand, 9926141 - 9926268
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagc-aagctct 282  Q
    ||||||||||||||||| | ||| ||||| |||||||||  |  ||| |||| |||||| ||| || ||||||  | ||| |||| |||||| || || |    
T  9926141 tttttaaaactcggtatccgatcgaaggaccgactaatctaaagggatcaatcccaccgcccagttgcgggggctccgttctaagccagagcaaaacttt 9926240  T
Q  283 gtatggacttgcccaccgaaattgacac 310  Q
    ||||||| ||||||||| ||||||||||    
T  9926241 gtatggatttgcccaccaaaattgacac 9926268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 31162952 - 31162901
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaat 235  Q
    ||||||||||||||||| | || ||||||||||||||| ||||| |||||||    
T  31162952 tttttaaaactcggtatccgattcaaggatcgactaattagagatgaccaat 31162901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 45859038 - 45859161
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||| ||||||| | ||||||  ||| ||||||| ||| |||||||| | |||  |||||| |||||| ||||||  |||  |||||||||  ||    
T  45859038 ttttaaaaattcggtatccgatccaataatcaactaatccgaggggaccaatcctaccacccacttgcgggggccctgtttaaagcaagagcaagcgatg 45859137  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  45859138 tatggacttagcccaccgaaattg 45859161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 352
Target Start/End: Complemental strand, 168231 - 168201
Alignment:
Q  322 atcccaagccaaccactaggccaactccaaa 352  Q
    |||||||||||||||||||||||||||||||    
T  168231 atcccaagccaaccactaggccaactccaaa 168201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 306
Target Start/End: Complemental strand, 16539804 - 16539687
Alignment:
Q  189 aaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaa-gctctgtatg 287  Q
    |||| ||||||| | || |||| ||||||||||  ||| |||||||| |||||  |||||||| |||  || ||| |||| ||| |||| ||||||||||    
T  16539804 aaaattcggtatccgatacaagtatcgactaatttgaggggaccaatcccaccacccacttacagggcccc-gttctaagccagcgcaaagctctgtatg 16539706  T
Q  288 gacttgcccaccgaaattg 306  Q
    |||||||||||| ||||||    
T  16539705 gacttgcccaccaaaattg 16539687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 306
Target Start/End: Original strand, 19034474 - 19034504
Alignment:
Q  276 aagctctgtatggacttgcccaccgaaattg 306  Q
    |||||||||||||||||||||||||||||||    
T  19034474 aagctctgtatggacttgcccaccgaaattg 19034504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 32930951 - 32930830
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||| ||| ||||||| ||||| ||| ||||| ||||| ||| ||| |||| ||||| ||||||| | |||  || |||  ||| ||||||||||||||    
T  32930951 ttttttaaattcggtatccaatctaagaatcgattaatctgaggggatcaatcccaccatccacttgcagggaccccgtttaaagccagagcaagctctg 32930852  T
Q  284 tatggactt-gcccaccgaaat 304  Q
     |||||||| ||||||| ||||    
T  32930851 catggacttagcccaccaaaat 32930830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 37351542 - 37351579
Alignment:
Q  270 cagagcaagctctgtatggactt-gcccaccgaaattg 306  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  37351542 cagagcaagctctgtatggacttagcccaccgaaattg 37351579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 40145963 - 40146012
Alignment:
Q  266 aagtcagagcaagctctgtatggactt-gcccaccgaaattgacactaga 314  Q
    ||||||||||||||||||||||||||| ||||||  |||||| |||||||    
T  40145963 aagtcagagcaagctctgtatggacttagcccacataaattggcactaga 40146012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 14604003 - 14603947
Alignment:
Q  179 atttctttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaat 235  Q
    |||| |||| |||||||||||| | ||||||| ||||||||||| ||| ||||||||    
T  14604003 attttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 14603947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 5077 - 5200
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| ||| || |||||| || |||  ||| ||||||||||||||    
T  5077 ttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaagctctg 5176  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  5177 tatggacttagcccaccgaaattg 5200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 7304 - 7427
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||| ||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||| ||||||||    
T  7304 tttttaaaacttggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagaaagctctg 7403  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  7404 tatggacttagcccaccgaaattg 7427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 40526 - 40404
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  40526 ttttgaaaactcggtatccgatccaagaatcgactaatccgag-ggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 40428  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  40427 tatggacttagcccaccgaaattg 40404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 162011 - 161888
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| ||||||||||||   ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| ||  ||| ||| ||||||||||||||    
T  162011 ttttgaaaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccattaaaagccagagcaagctctg 161912  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  161911 tatggacttagcccaccgaaattg 161888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 184 - 292
Target Start/End: Original strand, 2421 - 2529
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | || ||||||  |||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||||||    
T  2421 tttttaaaactcggtatccgattcaaggacggactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctg 2520  T
Q  284 tatggactt 292  Q
    |||||||||    
T  2521 tatggactt 2529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 1052 - 1174
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||| ||| ||||||||||  ||| |||||||| ||||||||||||| |||||| ||  ||  ||| ||||||||||||||    
T  1052 ttttaaaaactcggtatccgatc-aagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagcaagctctg 1150  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  1151 tatggacttagcccaccgaaattg 1174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 9295 - 9417
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||| ||| ||||||||||  ||| |||||||| ||||||||||||| |||||| ||  ||  ||| ||||||||||||||    
T  9295 ttttgaaaactcggtatccgatc-aagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagcaagctctg 9393  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  9394 tatggacttagcccaccgaaattg 9417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 306
Target Start/End: Original strand, 12027 - 12118
Alignment:
Q  215 gactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt-gcccaccgaaattg 306  Q
    |||||||  ||| |||||||| |||||||||||||  ||||  ||  ||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  12027 gactaattcgaggggaccaatcccaccgtccacttgtggggccccattta-aagccagagcaagctctgtatggacttagcccaccgaaattg 12118  T

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Target: scaffold0051 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 52866 - 52989
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | || |||| ||||||||||| |||||||||||| | |||| |||| | |||||| || |||  ||| ||||||||||||||    
T  52866 ttttgaaaactcggtatccgattcaagaatcgactaatccgagaggaccaatcctaccgcccacctgcgggggccccgtttaaagccagagcaagctctg 52965  T
Q  284 tatgga-cttgcccaccgaaattg 306  Q
    ||||||  ||||||||||||||||    
T  52966 tatggattttgcccaccgaaattg 52989  T

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Target: scaffold0328 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 13042 - 13162
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    ||||||||||||||||| | ||||||| ||| ||||||| ||| ||| |||| ||||||||||||| |||||| || |||  ||||   |||||||||||    
T  13042 tttttaaaactcggtatccgatccaagaatcaactaatctgaggggatcaatcccaccgtccacttgcgggggccccgtttaaagt---agcaagctctg 13138  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    |||||||||  |||||||||||||    
T  13139 tatggacttaacccaccgaaattg 13162  T

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Target: scaffold0160 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 303
Target Start/End: Original strand, 29138 - 29257
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagc-aagctct 282  Q
    ||||||||||||||||| | |||||||||  |||||||| ||| |||||||| |||| ||||| || |||||||||  || |||| |||||| |||||||    
T  29138 tttttaaaactcggtatccgatccaaggactgactaatctgaggggaccaatcccactgtccatttgcgggggtcc-attttaagccagagcaaagctct 29236  T
Q  283 gtatggacttgcccaccgaaa 303  Q
    |||||||||| || |||||||    
T  29237 gtatggacttaccgaccgaaa 29257  T

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Target: scaffold0102 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 39294 - 39171
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| ||||||||||||   ||||||| ||||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| |||| |||| ||||    
T  39294 ttttgaaaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagaacaagttctg 39195  T
Q  284 tatggac-ttgcccaccgaaattg 306  Q
    ||||||| | ||||||||||||||    
T  39194 tatggacatagcccaccgaaattg 39171  T

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Target: scaffold0049 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 279
Target Start/End: Complemental strand, 66956 - 66861
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagc 279  Q
    ||||||||||||||||| | ||||||||| ||||||||| ||| |||||||| |||||| |||||| |||||| || |||  ||| ||||||||||    
T  66956 tttttaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagc 66861  T

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Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 32489 - 32367
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||| ||| ||||||||||| ||| |||||||| |||||  |||||| |||||| |   ||  ||| ||||||||||||||    
T  32489 ttttgaaaactcggtatccgatc-aagaatcgactaatccgaggggaccaatcccaccacccacttgcgggggccacatttaaagccagagcaagctctg 32391  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  32390 tatggacttagcccaccgaaattg 32367  T

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Target: scaffold0459 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 10690 - 10811
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| | ||| ||| || |||||||  ||| |||||||| |||||||||||||  ||||  ||  ||| ||| ||||||||||||||    
T  10690 ttttgaaaactcggtatccgatc-aagaattgactaattcgaggggaccaatcccaccgtccacttgtggggccccattta-aagccagagcaagctctg 10787  T
Q  284 tatggactt-gcccaccgaaattg 306  Q
    ||||||||| ||||||||||||||    
T  10788 tatggacttagcccaccgaaattg 10811  T

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Target: scaffold0157 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 292
Target Start/End: Complemental strand, 20423 - 20316
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctg 283  Q
    |||| |||||||||||| |  |||||| || |||||||| ||||| | |||||  |||| |||||| ||||||||| |||  ||| ||||||||||| ||    
T  20423 ttttaaaaactcggtatccggtccaagaattgactaatccgagag-atcaattttaccgcccacttgcgggggtcccgtttaaagccagagcaagctatg 20325  T
Q  284 tatggactt 292  Q
    |||||||||    
T  20324 tatggactt 20316  T

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Target: scaffold0199 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 8446 - 8511
Alignment:
Q  184 tttttaaaactcggtattcaatccaaggatcgactaatcagagaggaccaattccaccgtccactt 249  Q
    |||| |||||||||||| | ||| ||| ||||||||||| ||| |||||||| |||||| ||||||    
T  8446 ttttaaaaactcggtatccgatctaagaatcgactaatccgagcggaccaatcccaccgcccactt 8511  T

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Target: scaffold0068 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 292
Target Start/End: Original strand, 41662 - 41747
Alignment:
Q  207 caaggatcgactaatcagagaggaccaattccaccgtccacttacgggggtcctgttataagtcagagcaagctctgtatggactt 292  Q
    |||| ||||||||||| ||| |||||||| |||  | |||||| | |||| || |||  ||| |||||||||||||||||||||||    
T  41662 caagaatcgactaatccgaggggaccaatcccattgcccacttgcaggggccccgtttaaagccagagcaagctctgtatggactt 41747  T

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