View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13060_low_7 (Length: 441)

Name: NF13060_low_7
Description: NF13060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13060_low_7
NF13060_low_7
[»] chr1 (49 HSPs)
chr1 (14-427)||(48125524-48125939)
chr1 (112-265)||(39219191-39219344)
chr1 (110-284)||(8880379-8880553)
chr1 (111-275)||(2581505-2581666)
chr1 (113-266)||(33293533-33293675)
chr1 (110-214)||(23719534-23719637)
chr1 (110-249)||(16903446-16903593)
chr1 (169-259)||(36187229-36187319)
chr1 (111-217)||(36421698-36421804)
chr1 (111-188)||(5293490-5293567)
chr1 (111-244)||(41476976-41477109)
chr1 (110-274)||(47644854-47645017)
chr1 (163-266)||(9982892-9982995)
chr1 (165-264)||(16237308-16237407)
chr1 (163-266)||(29871287-29871390)
chr1 (164-262)||(28297919-28298017)
chr1 (164-262)||(49250779-49250877)
chr1 (110-259)||(42728953-42729102)
chr1 (163-259)||(29936400-29936496)
chr1 (178-266)||(44615477-44615565)
chr1 (178-266)||(44793004-44793092)
chr1 (112-274)||(5283587-5283749)
chr1 (164-266)||(10778569-10778671)
chr1 (183-265)||(23058470-23058552)
chr1 (178-259)||(17134946-17135027)
chr1 (110-209)||(25181134-25181234)
chr1 (164-259)||(12494995-12495090)
chr1 (183-284)||(16433151-16433249)
chr1 (164-243)||(23490796-23490875)
chr1 (110-193)||(43513104-43513187)
chr1 (189-259)||(3627994-3628064)
chr1 (187-257)||(50426672-50426742)
chr1 (165-266)||(35069891-35069992)
chr1 (163-244)||(51421842-51421923)
chr1 (165-249)||(10450078-10450162)
chr1 (163-259)||(18354089-18354185)
chr1 (163-259)||(19572521-19572617)
chr1 (163-259)||(24236770-24236866)
chr1 (110-250)||(25154845-25154985)
chr1 (178-266)||(34085234-34085322)
chr1 (226-286)||(38686709-38686769)
chr1 (206-261)||(27867230-27867285)
chr1 (183-249)||(34673301-34673367)
chr1 (110-174)||(13692575-13692640)
chr1 (190-259)||(16408953-16409022)
chr1 (178-259)||(44632150-44632231)
chr1 (187-259)||(5181047-5181119)
chr1 (207-259)||(24710875-24710927)
chr1 (105-261)||(48576125-48576281)
[»] chr4 (77 HSPs)
chr4 (110-266)||(36919059-36919215)
chr4 (110-262)||(42907823-42907974)
chr4 (111-250)||(21956833-21956971)
chr4 (110-265)||(35304520-35304675)
chr4 (156-266)||(19883059-19883169)
chr4 (110-274)||(25298828-25298991)
chr4 (110-265)||(8843809-8843963)
chr4 (110-265)||(8856773-8856927)
chr4 (131-265)||(25941095-25941229)
chr4 (105-250)||(21713994-21714139)
chr4 (110-244)||(33516097-33516231)
chr4 (110-262)||(9929174-9929326)
chr4 (126-285)||(16575064-16575223)
chr4 (110-266)||(39086092-39086249)
chr4 (132-250)||(36306743-36306861)
chr4 (118-266)||(4741219-4741366)
chr4 (110-266)||(12075634-12075790)
chr4 (164-265)||(1724314-1724415)
chr4 (183-275)||(12825455-12825547)
chr4 (178-262)||(15987269-15987353)
chr4 (110-262)||(37384209-37384360)
chr4 (163-262)||(47550360-47550459)
chr4 (165-259)||(1866559-1866653)
chr4 (111-265)||(3505205-3505359)
chr4 (164-266)||(26564821-26564923)
chr4 (183-265)||(29527821-29527903)
chr4 (110-194)||(7334260-7334342)
chr4 (169-250)||(32585484-32585565)
chr4 (111-284)||(43351360-43351533)
chr4 (164-244)||(6382297-6382377)
chr4 (163-259)||(32596194-32596290)
chr4 (186-250)||(47239404-47239468)
chr4 (110-250)||(55783440-55783580)
chr4 (110-250)||(55847622-55847762)
chr4 (164-243)||(5902640-5902719)
chr4 (164-243)||(7608960-7609039)
chr4 (110-181)||(30034610-30034681)
chr4 (164-243)||(44317525-44317604)
chr4 (113-187)||(25265229-25265302)
chr4 (183-265)||(47103747-47103829)
chr4 (111-228)||(12505571-12505688)
chr4 (136-265)||(23927645-23927773)
chr4 (163-228)||(37349112-37349177)
chr4 (183-259)||(11028082-11028158)
chr4 (165-265)||(14605929-14606029)
chr4 (183-239)||(30266360-30266416)
chr4 (183-239)||(30285772-30285828)
chr4 (163-259)||(31752445-31752541)
chr4 (164-243)||(11122895-11122974)
chr4 (163-262)||(19534444-19534543)
chr4 (113-200)||(37926498-37926585)
chr4 (131-198)||(40420656-40420723)
chr4 (164-243)||(43893218-43893297)
chr4 (113-176)||(50376444-50376507)
chr4 (140-250)||(43553412-43553522)
chr4 (165-274)||(10574414-10574523)
chr4 (110-175)||(33616209-33616274)
chr4 (178-265)||(6482039-6482126)
chr4 (183-250)||(21544588-21544655)
chr4 (183-274)||(31782622-31782713)
chr4 (141-216)||(54270583-54270658)
chr4 (164-243)||(55826649-55826728)
chr4 (187-249)||(3737789-3737851)
chr4 (128-186)||(24474524-24474582)
chr4 (131-259)||(10302040-10302169)
chr4 (63-104)||(17113178-17113219)
chr4 (69-102)||(25941022-25941055)
chr4 (186-259)||(48459493-48459566)
chr4 (178-242)||(4652679-4652743)
chr4 (281-341)||(7334113-7334173)
chr4 (63-99)||(8843985-8844021)
chr4 (63-99)||(8856949-8856985)
chr4 (163-247)||(9230271-9230355)
chr4 (207-259)||(25265174-25265226)
chr4 (163-263)||(33916146-33916246)
chr4 (178-230)||(42299794-42299846)
chr4 (183-259)||(50684476-50684552)
[»] chr3 (41 HSPs)
chr3 (110-252)||(30904832-30904973)
chr3 (111-217)||(40890278-40890383)
chr3 (163-265)||(53631887-53631989)
chr3 (164-265)||(4016047-4016148)
chr3 (164-341)||(23546863-23547046)
chr3 (163-259)||(48390826-48390922)
chr3 (136-249)||(3385875-3385988)
chr3 (184-265)||(4557308-4557389)
chr3 (163-259)||(34025937-34026033)
chr3 (163-259)||(44106801-44106897)
chr3 (163-259)||(44172609-44172705)
chr3 (163-259)||(44179309-44179405)
chr3 (163-259)||(49580047-49580143)
chr3 (110-265)||(27937669-27937823)
chr3 (139-266)||(42243346-42243473)
chr3 (163-266)||(42758357-42758460)
chr3 (169-259)||(7469787-7469877)
chr3 (184-266)||(34119660-34119742)
chr3 (163-244)||(830992-831072)
chr3 (23-243)||(27252391-27252628)
chr3 (110-175)||(37032191-37032256)
chr3 (183-244)||(44639277-44639338)
chr3 (125-265)||(4553136-4553275)
chr3 (163-259)||(29842291-29842386)
chr3 (183-266)||(19111737-19111820)
chr3 (186-265)||(30616284-30616363)
chr3 (164-259)||(39655282-39655377)
chr3 (178-265)||(54317142-54317229)
chr3 (178-243)||(29284334-29284399)
chr3 (164-237)||(31126826-31126899)
chr3 (183-244)||(52198158-52198219)
chr3 (163-275)||(49025664-49025775)
chr3 (186-265)||(10043285-10043364)
chr3 (164-259)||(34154398-34154493)
chr3 (14-57)||(40890180-40890223)
chr3 (164-259)||(44953444-44953539)
chr3 (125-170)||(772892-772936)
chr3 (163-244)||(39728654-39728735)
chr3 (178-243)||(44252745-44252810)
chr3 (178-262)||(22535847-22535931)
chr3 (190-262)||(43582588-43582659)
[»] chr7 (59 HSPs)
chr7 (110-258)||(29292637-29292787)
chr7 (110-306)||(19439972-19440169)
chr7 (125-265)||(3774019-3774159)
chr7 (110-295)||(23475236-23475422)
chr7 (110-265)||(4101477-4101632)
chr7 (110-274)||(23533598-23533763)
chr7 (165-274)||(28309482-28309591)
chr7 (110-307)||(43550378-43550574)
chr7 (163-259)||(27850335-27850431)
chr7 (183-266)||(30839136-30839219)
chr7 (191-341)||(24425396-24425546)
chr7 (110-176)||(31345461-31345527)
chr7 (126-259)||(3157034-3157167)
chr7 (164-259)||(35074459-35074554)
chr7 (183-265)||(18825875-18825957)
chr7 (179-265)||(26622955-26623041)
chr7 (163-275)||(3920526-3920638)
chr7 (163-295)||(16811718-16811849)
chr7 (163-259)||(16866157-16866253)
chr7 (163-259)||(17885453-17885549)
chr7 (183-259)||(18683982-18684058)
chr7 (165-265)||(31425998-31426098)
chr7 (163-266)||(5377073-5377176)
chr7 (163-262)||(30650619-30650718)
chr7 (110-189)||(36251009-36251088)
chr7 (164-259)||(45380096-45380191)
chr7 (163-262)||(45885771-45885870)
chr7 (186-259)||(10072477-10072550)
chr7 (178-259)||(12980380-12980461)
chr7 (165-250)||(32546182-32546267)
chr7 (211-268)||(37103127-37103184)
chr7 (163-268)||(43507433-43507538)
chr7 (164-243)||(18125253-18125332)
chr7 (164-243)||(21702648-21702727)
chr7 (171-265)||(2630577-2630670)
chr7 (189-259)||(3226955-3227025)
chr7 (196-258)||(10990871-10990933)
chr7 (178-268)||(16079016-16079106)
chr7 (164-266)||(27063127-27063229)
chr7 (127-266)||(37217956-37218096)
chr7 (110-266)||(11472716-11472870)
chr7 (165-265)||(22973378-22973478)
chr7 (220-264)||(33841123-33841167)
chr7 (186-262)||(39317006-39317082)
chr7 (165-265)||(44845138-44845238)
chr7 (163-250)||(30999964-31000050)
chr7 (164-259)||(38139801-38139896)
chr7 (211-266)||(42908043-42908098)
chr7 (169-259)||(7780002-7780092)
chr7 (165-259)||(27063324-27063418)
chr7 (163-265)||(27896478-27896580)
chr7 (189-259)||(41103670-41103740)
chr7 (194-259)||(39456024-39456089)
chr7 (183-244)||(44794052-44794112)
chr7 (186-266)||(10995836-10995916)
chr7 (64-104)||(11472887-11472927)
chr7 (183-239)||(29157357-29157413)
chr7 (36-72)||(37217847-37217883)
chr7 (163-259)||(38152875-38152971)
[»] chr5 (38 HSPs)
chr5 (18-250)||(29664789-29665041)
chr5 (110-266)||(6810088-6810244)
chr5 (111-265)||(27900405-27900559)
chr5 (110-286)||(17153099-17153275)
chr5 (135-266)||(40187660-40187790)
chr5 (113-266)||(16311296-16311448)
chr5 (136-265)||(32574942-32575071)
chr5 (156-305)||(38006433-38006582)
chr5 (163-259)||(4920809-4920905)
chr5 (110-198)||(12457447-12457535)
chr5 (113-266)||(38972855-38973008)
chr5 (138-261)||(8020573-8020696)
chr5 (184-258)||(28569032-28569106)
chr5 (135-228)||(7350448-7350541)
chr5 (165-294)||(12712532-12712661)
chr5 (163-248)||(35194010-35194095)
chr5 (164-283)||(12447365-12447484)
chr5 (184-259)||(20973506-20973581)
chr5 (113-176)||(35584050-35584112)
chr5 (164-274)||(34259239-34259349)
chr5 (163-259)||(4583102-4583198)
chr5 (163-259)||(15890190-15890285)
chr5 (183-266)||(2681219-2681302)
chr5 (187-286)||(10822509-10822608)
chr5 (126-336)||(16366382-16366591)
chr5 (132-259)||(18451895-18452022)
chr5 (165-259)||(23045001-23045095)
chr5 (165-294)||(12773796-12773925)
chr5 (156-249)||(12834594-12834687)
chr5 (163-259)||(30996579-30996675)
chr5 (111-171)||(39887199-39887259)
chr5 (163-262)||(5908695-5908794)
chr5 (163-262)||(12866558-12866657)
chr5 (163-258)||(42987490-42987585)
chr5 (105-175)||(457466-457536)
chr5 (268-340)||(12866468-12866540)
chr5 (163-203)||(27088418-27088458)
chr5 (64-104)||(40187832-40187872)
[»] chr2 (38 HSPs)
chr2 (110-247)||(25210308-25210445)
chr2 (110-265)||(13954676-13954831)
chr2 (110-265)||(14095883-14096038)
chr2 (126-235)||(11958962-11959071)
chr2 (165-265)||(38342522-38342622)
chr2 (110-265)||(35248388-35248539)
chr2 (18-306)||(35965153-35965461)
chr2 (110-266)||(13531880-13532035)
chr2 (165-265)||(43371539-43371639)
chr2 (14-163)||(31600873-31601040)
chr2 (118-251)||(30696863-30696996)
chr2 (118-240)||(4961479-4961598)
chr2 (110-265)||(17845394-17845550)
chr2 (164-243)||(9632371-9632450)
chr2 (183-250)||(18485652-18485719)
chr2 (164-259)||(24414141-24414236)
chr2 (111-174)||(40359276-40359339)
chr2 (164-306)||(6027851-6027993)
chr2 (111-193)||(34544386-34544468)
chr2 (178-243)||(30846945-30847010)
chr2 (163-259)||(7314657-7314753)
chr2 (178-262)||(13705367-13705451)
chr2 (187-259)||(37106700-37106772)
chr2 (186-265)||(15546751-15546830)
chr2 (165-258)||(44057868-44057962)
chr2 (165-250)||(3547152-3547237)
chr2 (163-244)||(8915961-8916042)
chr2 (183-259)||(10208439-10208515)
chr2 (183-266)||(30978931-30979012)
chr2 (163-259)||(37999467-37999563)
chr2 (187-250)||(24051642-24051705)
chr2 (164-243)||(36128131-36128210)
chr2 (163-262)||(45256807-45256906)
chr2 (165-259)||(14331513-14331607)
chr2 (163-265)||(35337763-35337864)
chr2 (156-274)||(34320600-34320720)
chr2 (207-259)||(33175257-33175309)
chr2 (119-187)||(37309812-37309880)
[»] chr6 (39 HSPs)
chr6 (110-264)||(9402519-9402672)
chr6 (116-266)||(256494-256645)
chr6 (104-265)||(32959785-32959945)
chr6 (111-259)||(13769003-13769151)
chr6 (178-305)||(14410819-14410945)
chr6 (165-258)||(29199895-29199988)
chr6 (105-274)||(8320789-8320958)
chr6 (118-258)||(20349001-20349142)
chr6 (184-265)||(28079699-28079780)
chr6 (163-259)||(32853827-32853923)
chr6 (163-266)||(12678096-12678199)
chr6 (164-295)||(14506070-14506201)
chr6 (163-275)||(24602849-24602961)
chr6 (164-259)||(5863392-5863487)
chr6 (110-244)||(10925467-10925601)
chr6 (164-262)||(27534668-27534766)
chr6 (137-259)||(34346014-34346136)
chr6 (136-197)||(1947862-1947923)
chr6 (178-259)||(2367324-2367405)
chr6 (163-259)||(27738755-27738851)
chr6 (163-259)||(32532523-32532619)
chr6 (207-259)||(34178338-34178390)
chr6 (164-243)||(3483948-3484027)
chr6 (178-265)||(14254956-14255042)
chr6 (163-258)||(24225681-24225776)
chr6 (113-175)||(34179101-34179164)
chr6 (181-302)||(7393853-7393974)
chr6 (163-244)||(12141368-12141449)
chr6 (163-256)||(12309555-12309648)
chr6 (126-175)||(14321813-14321862)
chr6 (161-266)||(29341237-29341342)
chr6 (105-200)||(2126688-2126784)
chr6 (163-243)||(11762428-11762508)
chr6 (183-266)||(18908896-18908979)
chr6 (111-176)||(252860-252926)
chr6 (165-259)||(9458843-9458937)
chr6 (178-259)||(32053086-32053167)
chr6 (183-259)||(10142527-10142603)
chr6 (207-275)||(14034529-14034597)
[»] chr8 (40 HSPs)
chr8 (110-268)||(8545349-8545507)
chr8 (110-244)||(28345421-28345555)
chr8 (110-266)||(29918537-29918693)
chr8 (110-306)||(5700286-5700482)
chr8 (153-266)||(30481423-30481536)
chr8 (110-250)||(9476031-9476171)
chr8 (156-286)||(14186296-14186426)
chr8 (178-306)||(17469253-17469381)
chr8 (156-262)||(45236041-45236147)
chr8 (159-264)||(14687378-14687483)
chr8 (114-264)||(17084111-17084263)
chr8 (110-250)||(30903976-30904116)
chr8 (156-244)||(39379604-39379691)
chr8 (163-262)||(24870030-24870129)
chr8 (110-264)||(12468223-12468376)
chr8 (110-265)||(6388519-6388663)
chr8 (183-264)||(10297461-10297542)
chr8 (110-203)||(36274973-36275065)
chr8 (131-274)||(9642345-9642489)
chr8 (171-266)||(1012610-1012704)
chr8 (139-266)||(14155491-14155618)
chr8 (164-259)||(24927933-24928028)
chr8 (164-243)||(32303045-32303124)
chr8 (165-259)||(15068597-15068690)
chr8 (110-192)||(17108306-17108388)
chr8 (171-265)||(20399583-20399677)
chr8 (113-265)||(27777201-27777354)
chr8 (163-259)||(29108831-29108927)
chr8 (110-193)||(5793515-5793598)
chr8 (189-259)||(27932422-27932492)
chr8 (178-266)||(37960964-37961052)
chr8 (164-259)||(43113635-43113730)
chr8 (205-251)||(24189533-24189579)
chr8 (110-192)||(35747265-35747345)
chr8 (207-264)||(35215563-35215619)
chr8 (165-306)||(36131879-36132020)
chr8 (186-259)||(40248380-40248453)
chr8 (221-265)||(15173883-15173927)
chr8 (64-104)||(28345364-28345404)
chr8 (163-259)||(39445585-39445681)
[»] scaffold0036 (1 HSPs)
scaffold0036 (164-265)||(33377-33478)
[»] scaffold0059 (1 HSPs)
scaffold0059 (183-258)||(70098-70173)
[»] scaffold0157 (1 HSPs)
scaffold0157 (111-228)||(14789-14906)
[»] scaffold0264 (1 HSPs)
scaffold0264 (110-250)||(17473-17613)
[»] scaffold0005 (1 HSPs)
scaffold0005 (165-265)||(211349-211449)
[»] scaffold1322 (1 HSPs)
scaffold1322 (126-189)||(1057-1120)
[»] scaffold0244 (1 HSPs)
scaffold0244 (110-175)||(4673-4738)
[»] scaffold0184 (1 HSPs)
scaffold0184 (165-266)||(2954-3055)
[»] scaffold0013 (2 HSPs)
scaffold0013 (183-239)||(105498-105554)
scaffold0013 (183-239)||(128150-128206)
[»] scaffold0294 (1 HSPs)
scaffold0294 (163-266)||(14758-14861)
[»] scaffold0135 (1 HSPs)
scaffold0135 (163-247)||(36137-36221)
[»] scaffold0022 (1 HSPs)
scaffold0022 (163-259)||(90580-90676)


Alignment Details
Target: chr1 (Bit Score: 365; Significance: 0; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 14 - 427
Target Start/End: Complemental strand, 48125939 - 48125524
Alignment:
Q  14 atcaatgactatgatgattgagaagagag--gccgagagtgtgagatattgaaagagagaactatgacaagtgaatgtcatctgaaagactgatgtatgt 111  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48125939 atcaatgactatgatgattgagaagagagaggccgagagtgtgagatattgaaagagagaactatgacaagtgaatgtcatctgaaagactgatgtatgt 48125840  T
Q  112 gaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacct 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  48125839 gaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcggggtggatacct 48125740  T
Q  212 atatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaatggagaaaacctgttaaattagatttggttcaaccg 311  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||  |||||| |||||||| | |||||||||||||||||| ||||||||||||||    
T  48125739 atatcctcgttacccgtcccgtacccgtgttttaaaatcaggaaaaatccaaactcagtcaaaacgaagaaaacctgttaaattaaatttggttcaaccg 48125640  T
Q  312 gataccctcatgtatgagttttgttgccataaggtgggggagaaaaatggagcattgtgtaacttgcgtgttctcccccacctcttattcatattcatgt 411  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48125639 gataccctcgtgtatgagttttgttgccataaggtgggggagaaaaatggagcattgtgtaacttgcgtgttctcccccacctcttattcatattcatgt 48125540  T
Q  412 gtaacttgcccttatt 427  Q
    ||||||||||||||||    
T  48125539 gtaacttgcccttatt 48125524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 112 - 265
Target Start/End: Original strand, 39219191 - 39219344
Alignment:
Q  112 gaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacct 211  Q
    ||||| |||||| ||||||||||||||||||||||||| |||| |||||| ||||||||||||    |||||||||||||||||||| |||| | ||| |    
T  39219191 gaaatgatttagggtttgagtttctatttatataaaagaggtaataaattaattttctacatttagaacgagtttgggtatgggttcggggtgggtacat 39219290  T
Q  212 atatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
     ||||| ||||||  || ||||||||||||||||||||| |||||||| |||||    
T  39219291 gtatccccgttacttgttccgtacccgtgttttaaaatcggggaaaacccaaac 39219344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 110 - 284
Target Start/End: Original strand, 8880379 - 8880553
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| ||||| |||||||||||||||||||| ||||| |||| |||||| |||||   |||| | |||| |||||||||||||| |||||| |||||    
T  8880379 gtgaaatgatttaaagtttgagtttctatttataaaaaaggggtaataaatttatttttagcatttgggacgggtttgggtatgggtccagggtggatac 8880478  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaatggagaaaa 284  Q
    || ||||| | ||||| |||| |||| |||||||| |||||   |||||| |||||  ||||||| |||| ||||    
T  8880479 ctttatccccattacctgtcctgtactcgtgtttttaaatcgaagaaaacccaaaccaagtcaaagtggaaaaaa 8880553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 111 - 275
Target Start/End: Original strand, 2581505 - 2581666
Alignment:
Q  111 tgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacc 210  Q
    |||||| |||||||||||||||||||||||||||||||| | || |||||||||||||||| || |  ||  ||||  |||||||||   ||| |  | |    
T  2581505 tgaaatgatttagagtttgagtttctatttatataaaag-gatattaaattgattttctacttt-gaaacaggtttaagtatgggttgtaggtgggcatc 2581602  T
Q  211 tatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaa 275  Q
    ||||||| ||||||||||||| ||||| |||||||||||||| ||||||||||||| ||||||||    
T  2581603 tatatcc-cgttacccgtcccttacccatgttttaaaatcagagaaaactcaaactcagtcaaaa 2581666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 113 - 266
Target Start/End: Complemental strand, 33293675 - 33293533
Alignment:
Q  113 aaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagataccta 212  Q
    |||| |||||| ||||||||||||||| ||||||||  |||| |||||||||||||||||||||  |||||||||||||||||||           ||||    
T  33293675 aaatgatttagggtttgagtttctattgatataaaatgggtactaaattgattttctacattcggaacgagtttgggtatgggtt-----------ccta 33293587  T
Q  213 tatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    ||||| | ||||||||||| |||||||||||| ||||| || ||||| ||||||    
T  33293586 tatccccattacccgtcccatacccgtgttttgaaatcgggaaaaacccaaact 33293533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 23719534 - 23719637
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| ||||| |||||||||||||||||||||||||  ||||||||||||| ||| |||||||| |||||||||| ||||| |||| || | |||||    
T  23719534 gtgaaatgatttatagtttgagtttctatttatataaaaagggtagtaaattga-tttgtacattcgggacgagtttgagtatgagttcgggatggatac 23719632  T
Q  210 ctata 214  Q
    |||||    
T  23719633 ctata 23719637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 249
Target Start/End: Original strand, 16903446 - 16903593
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttct--------acattcgcgacgagtttgggtatgggttcagg 201  Q
    |||||||||||||| |||||||||| |||||||||||||  || | |||||||||||| |        ||||||| |||| ||||||||||| |||| ||    
T  16903446 gtgaaataatttagggtttgagtttatatttatataaaaagggcaataaattgattttttttttttttacattcgggacgggtttgggtatgagttcggg 16903545  T
Q  202 gtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaat 249  Q
    || | ||||||||||| | |||||  |||||||| |||||||||||||    
T  16903546 gtgggtacctatatccccattacctatcccgtactcgtgttttaaaat 16903593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 36187319 - 36187229
Alignment:
Q  169 tacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||| | |||| ||||||||||||||||||||| | ||||||||| | ||||||||||||| |||||||||||| | ||| ||||||||    
T  36187319 tacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaac 36187229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 111 - 217
Target Start/End: Original strand, 36421698 - 36421804
Alignment:
Q  111 tgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacc 210  Q
    |||||| |||||||||| |||||| ||||||||||| || | || ||||||||||||||| ||||| |||||||||||||||  |||| ||||   ||||    
T  36421698 tgaaatgatttagagttcgagtttttatttatataagagggataataaattgattttctatattcgagacgagtttgggtataagttcggggtgagtacc 36421797  T
Q  211 tatatcc 217  Q
    |||||||    
T  36421798 tatatcc 36421804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 111 - 188
Target Start/End: Complemental strand, 5293567 - 5293490
Alignment:
Q  111 tgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgg 188  Q
    ||||||| ||| ||||||||||||||||||||||||||| | || |||||||| |||| ||||||| |||||||||||    
T  5293567 tgaaatagttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacgagtttgg 5293490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 41477109 - 41476976
Alignment:
Q  111 tgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacc 210  Q
    ||||||||||||| ||||   ||||| |||||||||||  ||||  ||||||||||||| | |||| |||| |||||||||||| ||| |||| | |||     
T  41477109 tgaaataatttagggtttccatttctctttatataaaaagggtaacaaattgattttctgctttcgggacgggtttgggtatggattcggggtgggtaca 41477010  T
Q  211 tatatcctcgttacccgtcccgtacccgtgtttt 244  Q
    ||||||| ||||| ||||||||||| ||| ||||    
T  41477009 tatatccacgttatccgtcccgtactcgtatttt 41476976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 274
Target Start/End: Complemental strand, 47645017 - 47644854
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| ||||||  | |||||||||||||||||||||| | || ||||||  | || |||||||| ||||||| ||| |||| |||| |||||| |||    
T  47645017 gtgaaatgatttaggatctgagtttctatttatataaaagggataataaattattattttacattcgggacgagtatggatatgagttcggggtaggtac 47644918  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaa 274  Q
     | ||||| | ||| |||||||||||| ||||||| | ||| |||||||| ||||| || |||||    
T  47644917 ttctatcc-cattatccgtcccgtacctgtgttttgagatcggggaaaacccaaacctaatcaaa 47644854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 163 - 266
Target Start/End: Complemental strand, 9982995 - 9982892
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||||| |||||| || | |||||||||||||||| |||| | ||||||||| |||||||||| |||| | |||||||||| ||||  ||||||| |||    
T  9982995 attttctgcattcgggatgggtttgggtatgggttcggggtgggtacctatatactcgttacccatcccattcccgtgttttgaaattggggaaaattca 9982896  T
Q  263 aact 266  Q
    ||||    
T  9982895 aact 9982892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 165 - 264
Target Start/End: Complemental strand, 16237407 - 16237308
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    |||||||||||| |  | |||||||||||||||| ||||   ||| ||||||||||||||||||||| ||||||| |||| ||||| |||||||| ||||    
T  16237407 tttctacattcgggtagggtttgggtatgggttcggggttagtacatatatcctcgttacccgtcccttacccgtattttgaaatcggggaaaacccaaa 16237308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 163 - 266
Target Start/End: Complemental strand, 29871390 - 29871287
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    |||||||||||||| |||| ||||||||||| ||||||||| | ||||||||| |  |||||| ||||| ||||| |||||| ||||| | |||||| ||    
T  29871390 attttctacattcgggacgggtttgggtatgagttcagggtgggtacctatataccagttacctgtcccatacccatgttttgaaatcggagaaaaccca 29871291  T
Q  263 aact 266  Q
    ||||    
T  29871290 aact 29871287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 262
Target Start/End: Original strand, 28297919 - 28298017
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    |||| |||||| | |||| |||||||||||||||| |||| | ||||||||| | ||||||||||||| |||||||||||  | ||| |||||||||||    
T  28297919 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactca 28298017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 262
Target Start/End: Complemental strand, 49250877 - 49250779
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    |||| |||||| | |||| ||||||||||||||||  ||| ||||||||||| | | ||||||||||| |||||||||||| | ||| |||||||||||    
T  49250877 ttttttacatttgggacgggtttgggtatgggttcgaggtggatacctatatacccattacccgtcccatacccgtgttttgagatcggggaaaactca 49250779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 259
Target Start/End: Complemental strand, 42729102 - 42728953
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||| || | |||||||||||||||||||| | |  |||||| |||||||||||||   ||| ||||||||||| |||| |||||| |||    
T  42729102 gtgaaatgatttagtgtataagtttctatttatataaaagggatgataaatttattttctacattcagaacgtgtttgggtatgagttcggggtagttac 42729003  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    | |||||| | | || ||||  |||||| |||||| ||||| || |||||    
T  42729002 ccatatccccatcactcgtcttgtacccatgttttgaaatcgggaaaaac 42728953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 29936400 - 29936496
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| |||||||||||||||| |||| | ||||||||| | ||||||||||||| ||||||| |||| | ||| ||||||||    
T  29936400 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgagatcggggaaaac 29936496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 44615565 - 44615477
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    |||| ||||||||||| |||  |||| | ||||||||| |  |||||||||||| |||||||||||| |||||||||||||| ||||||    
T  44615565 gacgggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaaact 44615477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 44793004 - 44793092
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    |||| ||||||||||| |||  |||| | ||||||||| |  |||||||||||| |||||||||||| |||||||||||||| ||||||    
T  44793004 gacgggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaaact 44793092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 112 - 274
Target Start/End: Complemental strand, 5283749 - 5283587
Alignment:
Q  112 gaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacct 211  Q
    ||||| ||||| |||||||||| ||||||||| ||||| | |  ||||||||||||||||| ||  |||| |||| |||||| ||||  ||| | ||| |    
T  5283749 gaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttctacaatccagacgggtttaggtatgagttcgaggtgggtactt 5283650  T
Q  212 atatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaa 274  Q
     ||||| | ||||||||||||||| | |||||| | ||||  ||| || |||||| |||||||    
T  5283649 ctatccccattacccgtcccgtactcatgttttgagatcaaagaatacccaaactcagtcaaa 5283587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 164 - 266
Target Start/End: Complemental strand, 10778671 - 10778569
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaa 263  Q
    |||| |||||| | |||| || || |||||||||| |||| |||| ||||| || ||||||||||||| |||||||||||| ||||| || |||||| ||    
T  10778671 ttttttacatttgagacgggtatgagtatgggttcggggtggatatctataaccccgttacccgtcccatacccgtgttttgaaatcgggaaaaacttaa 10778572  T
Q  264 act 266  Q
    |||    
T  10778571 act 10778569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 23058470 - 23058552
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    |||||||||||||||| |||| | ||||||||||| ||||||||||| ||||| ||  |||| ||||| | ||||||||||||    
T  23058470 gtttgggtatgggttcggggtgggtacctatatccccgttacccgtctcgtactcgcattttgaaatcggagaaaactcaaac 23058552  T

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Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 17134946 - 17135027
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||||| ||||||||||||| |||  | ||||||||| | ||||||||||| | |||||||||||| ||||| ||||||||    
T  17134946 gacgagtatgggtatgggttcggggatggtacctatatacccgttacccgtctcatacccgtgttttgaaatcggggaaaac 17135027  T

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Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 209
Target Start/End: Original strand, 25181134 - 25181234
Alignment:
Q  110 gtgaaataattta-gagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagata 208  Q
    ||||||| ||||| ||||||  ||||||||||||||| ||| | ||||||||||| ||| |||| | | |||||||||| ||||| ||||||||| ||||    
T  25181134 gtgaaattatttaagagtttaggtttctatttatatagaagggatagtaaattgactttttacaattgggacgagtttgagtatgagttcagggtggata 25181233  T
Q  209 c 209  Q
    |    
T  25181234 c 25181234  T

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Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 259
Target Start/End: Original strand, 12494995 - 12495090
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||||||||| | |||| ||||||||||||||||  ||| | ||||||||| | |||||| |||||| || ||||||||| ||||| || |||||    
T  12494995 ttttctacatttgggacgggtttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatccgtgttttgaaatcgggaaaaac 12495090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 284
Target Start/End: Complemental strand, 16433249 - 16433151
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaatggagaa 282  Q
    |||||||||||||||| |||    |||||||||   ||||||||||||| |||||||||||| ||||| | ||||||||||||  | ||||||||| |||    
T  16433249 gtttgggtatgggttcggggg---tacctatatatccgttacccgtcccatacccgtgttttgaaatcggagaaaactcaaacccaatcaaaatggggaa 16433153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 23490875 - 23490796
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttt 243  Q
    |||| |||||| | |||| |||| ||||||||||| |||| | ||||||||| | ||||||||||||| |||||||||||    
T  23490875 ttttttacatttgggacgggttttggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttt 23490796  T

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Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 43513187 - 43513104
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatg 193  Q
    ||||||| |||||| ||||||||||||||||||||||||   ||  |||||||||||| ||||||||  ||| ||||| |||||    
T  43513187 gtgaaattatttagggtttgagtttctatttatataaaaagagttataaattgattttttacattcgaaacgggtttgagtatg 43513104  T

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Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 3628064 - 3627994
Alignment:
Q  189 gtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||||||| |||| | |||||| || | ||||||||||||| |||||||||||| ||||| ||||||||    
T  3628064 gtatgggttcggggtgggtacctacatacccgttacccgtcccatacccgtgttttgaaatcggggaaaac 3627994  T

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Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 257
Target Start/End: Complemental strand, 50426742 - 50426672
Alignment:
Q  187 gggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaa 257  Q
    |||||||||||| |||| | ||||||||| | ||||| ||||| | |||||||||||| ||||||||||||    
T  50426742 gggtatgggttcggggtgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcagggaaa 50426672  T

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Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 266
Target Start/End: Complemental strand, 35069992 - 35069891
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    |||||||||||| |  | ||||| |||||||||| |||| | ||| |||||||  ||||||||||  |||||||| || | ||||| |||||||||||||    
T  35069992 tttctacattcgggtagggtttgagtatgggttcggggtgggtacatatatccctgttacccgtcttgtacccgtattatgaaatcggggaaaactcaaa 35069893  T
Q  265 ct 266  Q
    ||    
T  35069892 ct 35069891  T

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Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 51421842 - 51421923
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgtttt 244  Q
    ||||| |||||| | |||| |||||||||||||||| |||| | ||| ||||| |  |||||||||||| ||||||||||||    
T  51421842 attttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatacatgttacccgtcccatacccgtgtttt 51421923  T

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Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 10450162 - 10450078
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaat 249  Q
    |||||||||||| |  | ||||||||||| |||| |||| | ||| |||||||  |||||||| ||||||||||| |||||||||    
T  10450162 tttctacattcgggtagggtttgggtatgagttcggggtgggtacatatatccctgttacccgccccgtacccgtattttaaaat 10450078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 18354185 - 18354089
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | ||||||| ||||||| ||||| |||| |  || ||||| | ||||||||||||| ||||| |||||| ||||| ||||||||    
T  18354185 attttttacatttgggacgagtatgggtatcggttcggggtgggaacttatatacccgttacccgtcccatacccatgttttgaaatcggggaaaac 18354089  T

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Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 19572617 - 19572521
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| || || |||||||||| |||| | ||||||||| | ||||||| ||||| |||||||||||| ||||| || |||||    
T  19572617 attttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcgggaaaaac 19572521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 24236866 - 24236770
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| ||||| |||||||||| |||| | ||||||||| | |||| ||||| || |||||||||||| | ||| ||||||||    
T  24236866 attttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttccccgttccatacccgtgttttgagatcggggaaaac 24236770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 250
Target Start/End: Complemental strand, 25154985 - 25154845
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    |||||||||||||  |||||  ||||  |||  ||||||| |||||| ||||||||||||| ||||  |||| ||||||| ||| ||||   || | |||    
T  25154985 gtgaaataatttaaggtttggatttccctttgaataaaaggggtagtgaattgattttctaaattcaggacgggtttgggcatgagttcgaagtgggtac 25154886  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatc 250  Q
     ||||||| | |||| |||||||||| |||||||| |||||    
T  25154885 ttatatccccattactcgtcccgtactcgtgttttgaaatc 25154845  T

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Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 34085234 - 34085322
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    ||||||| ||||||||||||| |||| | ||| |||| || |||||||| |||| ||| |||||||| ||||| || ||||| ||||||    
T  34085234 gacgagtatgggtatgggttcggggtgggtacatataaccccgttacccatcccatactcgtgttttgaaatcgggaaaaacccaaact 34085322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 286
Target Start/End: Original strand, 38686709 - 38686769
Alignment:
Q  226 cgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaatggagaaaacc 286  Q
    |||||| ||||||| |||||||||| |||||||  |||||| | |||||||||||||||||    
T  38686709 cgtcccatacccgtattttaaaatcggggaaaatccaaactcaatcaaaatggagaaaacc 38686769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 27867230 - 27867285
Alignment:
Q  206 atacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactc 261  Q
    ||||||||||| ||||||| |||| ||||||| |||||| |||||||| |||||||    
T  27867230 atacctatatcttcgttactcgtctcgtacccatgttttgaaatcaggaaaaactc 27867285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 34673367 - 34673301
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaat 249  Q
    |||||||||||||||| |||| | ||||||||| | ||||||| ||| | |||||||||||| ||||    
T  34673367 gtttgggtatgggttcggggtgggtacctatatacccgttaccagtctcatacccgtgttttgaaat 34673301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 13692575 - 13692640
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagt-aaattgattttctacatt 174  Q
    ||||||| |||||| ||||  ||||||||||||||||||| | || | ||||||||||||||||||    
T  13692575 gtgaaatgatttagggttttggtttctatttatataaaagggataataaaattgattttctacatt 13692640  T

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Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 16408953 - 16409022
Alignment:
Q  190 tatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||||||| |||| | ||||||||| |  |||||||||||| |||||||||||| ||||  ||||||||    
T  16408953 tatgggttcggggtcggtacctatatacctgttacccgtcccatacccgtgttttgaaattggggaaaac 16409022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 44632231 - 44632150
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||||||||| ||||| |||| ||| |||||| |||  |  |||||||||||| |||||||||||| ||||| | ||||||    
T  44632231 gacgagtttggatatggattcacggtggatacccatacacctgttacccgtcccatacccgtgttttgaaatcggagaaaac 44632150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 5181047 - 5181119
Alignment:
Q  187 gggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||||||||  |||| | | ||||||| | ||||||||||||| ||||||| |||| ||||| ||||||||    
T  5181047 gggtatgggtttggggtgggtgcctatatacccgttacccgtcccatacccgtattttgaaatcggggaaaac 5181119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 24710875 - 24710927
Alignment:
Q  207 tacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||||||| | ||||||||||||| |||||||||||| | ||| ||||||||    
T  24710875 tacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaac 24710927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 261
Target Start/End: Complemental strand, 48576281 - 48576125
Alignment:
Q  105 tgtatgtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggta 204  Q
    |||| ||||||| |||||| ||||||| || |||||||| ||||  | |  |||||||||||||| |||||| ||| ||||| ||  ||||||||| ||     
T  48576281 tgtaagtgaaatgatttagggtttgagattttatttatacaaaaaggattataaattgattttcttcattcgggacaagtttaggcgtgggttcagagtg 48576182  T
Q  205 gatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactc 261  Q
    |  || | ||||| | ||||||||| | |||| ||||||| | ||  ||||||||||    
T  48576181 ggcacttttatccccattacccgtctcatacctgtgttttgagattggggaaaactc 48576125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 110 - 266
Target Start/End: Original strand, 36919059 - 36919215
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| |||| ||||||||||||| ||  ||||||||||||||||||| ||| | |||||    
T  36919059 gtgaaatgatttagagtttgagtttctatttatataaaagtggtaataaactgattttctacatccggaacgagtttgggtatgggttaaggatggatac 36919158  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    |||||||| |||||| |||||  ||| | ||||||||| || |||||||||||||||    
T  36919159 ctatatccacgttactcgtcctatacacatgttttaaagtcggggaaaactcaaact 36919215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 110 - 262
Target Start/End: Original strand, 42907823 - 42907974
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||| || |||| | |||    
T  42907823 gtgaaatgatttagggtttgagtttctatttatataaaagag-tagtaaattgattttctacattcgggacgagtttgggtatgggctcggggtgggtac 42907921  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    |||||||| | |||| ||||||||| ||||||||| || || | |||||||||    
T  42907922 ctatatccccattactcgtcccgtatccgtgttttgaattcggagaaaactca 42907974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 111 - 250
Target Start/End: Complemental strand, 21956971 - 21956833
Alignment:
Q  111 tgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacc 210  Q
    |||||| |||||| ||||| |||| |||||||||||||| |||| |||||||||||||||||||||  |||||||||||||||||||| |||| |  |||    
T  21956971 tgaaatgatttagggtttgggtttttatttatataaaag-ggtaataaattgattttctacattcgtaacgagtttgggtatgggttcggggtgggcacc 21956873  T
Q  211 tatatcctcgttacccgtcccgtacccgtgttttaaaatc 250  Q
    ||||||| |||||| | | |||||||||||||||||||||    
T  21956872 tatatccccgttactcattccgtacccgtgttttaaaatc 21956833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 110 - 265
Target Start/End: Complemental strand, 35304675 - 35304520
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgc-gacgagtttgggtatgggttcagggtagata 208  Q
    ||||||| ||||||||||||||||||| |||||||||||| |||| ||||||||||| ||||||||   || ||||||||||||| |||  |||||| ||    
T  35304675 gtgaaatgatttagagtttgagtttctttttatataaaag-ggtaataaattgatttcctacattctttgatgagtttgggtatgagtttggggtaggta 35304577  T
Q  209 cctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    ||||||||| |||||||||||||||||   ||||||||||| || |||||| |||||    
T  35304576 cctatatccccgttacccgtcccgtacttatgttttaaaattagagaaaacccaaac 35304520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 156 - 266
Target Start/End: Complemental strand, 19883169 - 19883059
Alignment:
Q  156 taaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcaggga 255  Q
    |||||||||||| |||||||| |||||||||| |||| ||||| |||| ||||||||||||| |||||||| ||||||| ||||||||||||||| ||||    
T  19883169 taaattgattttatacattcgggacgagtttgtgtatcggttcggggtggatacctatatccccgttacccttcccgtatccgtgttttaaaatcgggga 19883070  T
Q  256 aaactcaaact 266  Q
    |||| ||||||    
T  19883069 aaacccaaact 19883059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 274
Target Start/End: Complemental strand, 25298991 - 25298828
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||||||||||||| ||||||||| ||||| |||  ||||||||||||| ||||| |  ||| |||||||||||||||| |||| || |     
T  25298991 gtgaaatgatttagagtttgagtt-ctatttataaaaaaggggtgataaattgattttcaacatttggtacgggtttgggtatgggttcggggtggacag 25298893  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaa 274  Q
    |||||||| | |||||| ||||||||||||||||| ||||| || ||||| |||||  |||||||    
T  25298892 ctatatccccattacccatcccgtacccgtgttttgaaatccggaaaaacccaaacccagtcaaa 25298828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 110 - 265
Target Start/End: Complemental strand, 8843963 - 8843809
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| ||||||  ||| ||||||||||||||| |||| |||| |||||| ||||||||||||| ||||| ||||||||||| |||| |||| | ||     
T  8843963 gtgaaatgatttaggatttaagtttctatttatatgaaaggggtaataaattaattttctacattcacgacgggtttgggtatgagttc-gggtgggtat 8843865  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    |||||||| || ||||||||||| ||| ||||||||||||| || |||| ||||||    
T  8843864 ctatatccccgctacccgtcccgcacctgtgttttaaaatcgggaaaaattcaaac 8843809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 110 - 265
Target Start/End: Complemental strand, 8856927 - 8856773
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| ||||||  ||| ||||||||||||||| |||| |||| |||||| ||||||||||||| ||||| ||||||||||| |||| |||| | ||     
T  8856927 gtgaaatgatttaggatttaagtttctatttatatgaaaggggtaataaattaattttctacattcacgacgggtttgggtatgagttc-gggtgggtat 8856829  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    |||||||| || ||||||||||| ||| ||||||||||||| || |||| ||||||    
T  8856828 ctatatccccgctacccgtcccgcacctgtgttttaaaatcgggaaaaattcaaac 8856773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 265
Target Start/End: Original strand, 25941095 - 25941229
Alignment:
Q  131 gtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcc 230  Q
    ||||||||||||||||||| |||  |||||||||||||||||| || |||  |||||||||||||||| |||| | ||||||| | | ||||||| ||||    
T  25941095 gtttctatttatataaaaggggttataaattgattttctacatccgagacatgtttgggtatgggttcggggtgggtacctatcttcccgttacctgtcc 25941194  T
Q  231 cgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    |||||||||||||| ||||| || ||||| |||||    
T  25941195 cgtacccgtgttttgaaatcgggaaaaacccaaac 25941229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 105 - 250
Target Start/End: Complemental strand, 21714139 - 21713994
Alignment:
Q  105 tgtatgtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggta 204  Q
    |||| ||||||| |||||| ||||||||||||||||||||||||| |||| |||||| |||||||||||| | ||||||||| |||||| ||| |||||     
T  21714139 tgtaagtgaaatgatttagggtttgagtttctatttatataaaagaggtaataaattaattttctacatttgagacgagtttaggtatgagtttagggtg 21714040  T
Q  205 gatacctatatcctcg-ttacccgtcccgtacccgtgttttaaaatc 250  Q
    | ||| |||| ||||| |||||| || ||||| | ||||||||||||    
T  21714039 ggtacatata-cctcgattacccatcacgtactcatgttttaaaatc 21713994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 110 - 244
Target Start/End: Complemental strand, 33516231 - 33516097
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||| |||||||||| |||||||||||||| |||| || ||||||||| |||||| | |||| |||||||||| ||||| |||| | |||    
T  33516231 gtgaaatgatttagggtttgagtttttatttatataaaaggggtaatacattgattttttacatttgagacgggtttgggtataggttcggggtgggtac 33516132  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgtttt 244  Q
     |||||||  ||||||| || ||||||||||||||    
T  33516131 ttatatccctgttacccatctcgtacccgtgtttt 33516097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 110 - 262
Target Start/End: Complemental strand, 9929326 - 9929174
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| ||||||||||| ||||| |||||||||  ||| |||| |||||||||||||||| |||  ||||| |||||||| | |||| |||| | |||    
T  9929326 gtgaaattatttagagtttcagtttatatttatatggaagaggtaataaattgattttctactttcaggacgattttgggtaagagttcggggtgggtac 9929227  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||||||  ||||||||| |  ||||||| |||| |||||||| ||||||||    
T  9929226 ctatatccatgttacccgtactatacccgtattttgaaatcaggaaaaactca 9929174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 126 - 285
Target Start/End: Original strand, 16575064 - 16575223
Alignment:
Q  126 tttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacc 225  Q
    ||||||||||||||||||| |||  |||| |||||| ||||| ||||||   ||||||||||||||| ||||| | || | ||| ||||||||||||| |    
T  16575064 tttgagtttctatttatattaaaagggtaataaattaattttttacatttaagacgagtttgggtataggttcggagtgggtacttatatcctcgttatc 16575163  T
Q  226 cgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaatggagaaaac 285  Q
    | ||||||||||| |||||||||||  |||| || |||||| | |||||  |||||||||    
T  16575164 catcccgtacccgcgttttaaaatcgaggaatacccaaactcaatcaaagcggagaaaac 16575223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 110 - 266
Target Start/End: Original strand, 39086092 - 39086249
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcga--cgagtttgggtatgggttcagggtagat 207  Q
    ||||||| |||||| |||| |||||||||||||||||||  ||||||||||||||||||||| || | ||   ||||||| ||||| |||||  |||| |    
T  39086092 gtgaaatgatttagggtttaagtttctatttatataaaa-aggtagtaaattgattttctacttttgtgatgagagtttgagtatgagttcactgtaggt 39086190  T
Q  208 acctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    |||||||||| |||||||||| ||| |||| |||| | ||||| | |||||||||||||    
T  39086191 acctatatccccgttacccgtaccgcacccatgttgtgaaatcggagaaaactcaaact 39086249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 250
Target Start/End: Original strand, 36306743 - 36306861
Alignment:
Q  132 tttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtccc 231  Q
    |||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||| || | | ||| || ||| ||||||||||| ||||| ||||| |    
T  36306743 tttctatttatataaaaggggtaataaattgattttctacattcgggacgggtttgagtgtagcttcgggttaggtacctatatccccgttaaccgtctc 36306842  T
Q  232 gtacccgtgttttaaaatc 250  Q
     |||||||||||| |||||    
T  36306843 atacccgtgttttgaaatc 36306861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 118 - 266
Target Start/End: Complemental strand, 4741366 - 4741219
Alignment:
Q  118 atttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcc 217  Q
    |||||| ||||||||||||||||||||||||  | || |||||||||||  ||||||||  ||| ||||  |||||||||| |||| | ||| |||||||    
T  4741366 atttagggtttgagtttctatttatataaaatggataataaattgattta-tacattcggaacgggtttttgtatgggttcggggtgggtacttatatcc 4741268  T
Q  218 tcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
      |||| ||||||| ||||| ||||||||||||  ||||||||||||||    
T  4741267 ctgttatccgtcccatacccatgttttaaaatcgaggaaaactcaaact 4741219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 110 - 266
Target Start/End: Complemental strand, 12075790 - 12075634
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| ||| ||||||| |||||||||||||||||||  |||| ||||||||||||||||||||  |||||||||| ||| | |||  |||| | |||    
T  12075790 gtgaaatgattcagagttttagtttctatttatataaaatgggtaataaattgattttctacattccggacgagtttgagtacgagtttggggtgggtac 12075691  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
     ||| |||   ||||| ||| |||||||||||||| ||||  |  ||||||||||||    
T  12075690 atatctccctattacctgtcacgtacccgtgttttgaaattggaaaaaactcaaact 12075634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 1724415 - 1724314
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaa 263  Q
    |||||| |||||| |||| |||||||||||||||| |||| | |||||||||   ||||||||||||| ||||| |||||| ||||| |||||||| |||    
T  1724415 ttttctgcattcgggacgggtttgggtatgggttcggggtgggtacctatataaccgttacccgtcccatacccatgttttgaaatcggggaaaacccaa 1724316  T
Q  264 ac 265  Q
    ||    
T  1724315 ac 1724314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 275
Target Start/End: Complemental strand, 12825547 - 12825455
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaa 275  Q
    |||||||||| |||||||||| | ||| |||||   ||||||||||||| |||||||||||| ||||| |||||||| |||||| ||||||||    
T  12825547 gtttgggtataggttcagggtgggtacgtatatatccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaactcagtcaaaa 12825455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 15987353 - 15987269
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    |||| |||||||||||||||| |||| | || |||||| | |||||||| |||| |||||||||||||||||| |||||||||||    
T  15987353 gacgggtttgggtatgggttcggggtgggtatctatatacccgttacccatcccatacccgtgttttaaaatctgggaaaactca 15987269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 262
Target Start/End: Original strand, 37384209 - 37384360
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||| ||||||  ||||||||||||||||| | || |||||||| |||||| ||| | |||| ||||| |||||||||  |||| |||      
T  37384209 gtgaaatgatttagggtttgaacttctatttatataaaagggataataaattga-tttctatatttgggacgggtttgtgtatgggtttggggtggatga 37384307  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
     |||||||||||| |  ||| |||||||||||||||||||  | |||||||||    
T  37384308 atatatcctcgttgcatgtcacgtacccgtgttttaaaattggagaaaactca 37384360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 47550459 - 47550360
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||| |||||| | |||| |||||||||||||||| |||| | ||||||||| |  |||||||||||| |||||||||||| | ||| |||||||||||    
T  47550459 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaactca 47550360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 1866653 - 1866559
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||||||||| |  |||||||||||||||||| |||| ||||| ||||||| | ||||||||| ||||||||| |||| ||||| || |||||    
T  1866653 tttctacattcgggtagagtttgggtatgggttcggggtggatacatatatccgcattacccgtctcgtacccgtattttgaaatcgggaaaaac 1866559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 111 - 265
Target Start/End: Original strand, 3505205 - 3505359
Alignment:
Q  111 tgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacc 210  Q
    |||||| || |||||||||| |||||||||| |||||||  ||| ||||||||||||||| || ||  ||  ||||| ||||   ||||||||   ||||    
T  3505205 tgaaatgatctagagtttgaatttctatttagataaaaggagtaataaattgattttctatatgcggaacaggtttgtgtatatattcagggtgagtacc 3505304  T
Q  211 tatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    ||||||| ||| ||||||  ||||||| | |||||||||  ||||||||||||||    
T  3505305 tatatccccgtaacccgtttcgtacccatattttaaaattggggaaaactcaaac 3505359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 266
Target Start/End: Original strand, 26564821 - 26564923
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaa 263  Q
    |||||| |||| | |||| |||||||||||| ||| |||| | ||||||||| | ||||||||||||| |||||| ||||| ||||| |||||| |||||    
T  26564821 ttttctgcatttgggacgggtttgggtatggtttcggggtgggtacctatatacccgttacccgtcccatacccgcgttttgaaatcggggaaagctcaa 26564920  T
Q  264 act 266  Q
    |||    
T  26564921 act 26564923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 29527821 - 29527903
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    |||||||||||||||| |||| | ||| ||||||| ||||||||||| ||||||||| |||| ||||| |||||||| |||||    
T  29527821 gtttgggtatgggttcggggtgggtacatatatccccgttacccgtcacgtacccgtattttgaaatcggggaaaacccaaac 29527903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 7334342 - 7334260
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgg 194  Q
    ||||||| ||||||||||||||||||||||  ||||||| || || ||||||||||||| ||||| | ||||||||||| |||||    
T  7334342 gtgaaatgatttagagtttgagtttctatt--tataaaaacgataataaattgattttcaacatttgggacgagtttggatatgg 7334260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 169 - 250
Target Start/End: Original strand, 32585484 - 32585565
Alignment:
Q  169 tacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatc 250  Q
    |||||| | |||| ||||||||||||||||||||| | ||||||||| | ||||||| ||||| |||||||||||| |||||    
T  32585484 tacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatc 32585565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 284
Target Start/End: Complemental strand, 43351533 - 43351360
Alignment:
Q  111 tgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacc 210  Q
    |||||| ||| || |||||||||| ||||||| |||||| |||| ||||||||||||  ||||| | || || ||||| ||||||||| |||||| || |    
T  43351533 tgaaatgattcagggtttgagtttttatttatgtaaaagaggtaataaattgatttttcacatttgagatgaatttggatatgggttcggggtaggtatc 43351434  T
Q  211 tatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaatggagaaaa 284  Q
    ||||||   ||||| ||||||  || ||| ||||||||||    |||||||||||| | |||||| ||| ||||    
T  43351433 tatatctctgttactcgtcccaaactcgtattttaaaatcgaaaaaaactcaaactcaatcaaaacggaaaaaa 43351360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 6382377 - 6382297
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgtttt 244  Q
    |||| |||||| | |||| |||||||||||||||| |||| | ||||||||| | ||||||||||||| ||||||||||||    
T  6382377 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttt 6382297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 32596290 - 32596194
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||||||||||| ||| |||||||||||| |||   ||| |  |||||||| | ||||||||||||| |||||||||||| ||||| ||||||||    
T  32596290 attttctacattcgagacaagtttgggtatgagtttgaggtggggacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaac 32596194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 47239468 - 47239404
Alignment:
Q  186 tgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatc 250  Q
    |||||||||||||||||| |  |||||||| | ||||||||||||| ||||||||||||||||||    
T  47239468 tgggtatgggttcagggtgggaacctatatacccgttacccgtcccatacccgtgttttaaaatc 47239404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 250
Target Start/End: Original strand, 55783440 - 55783580
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| ||||||  |||||||||||||| ||||||||| |||| | || |||||||||| ||| | ||| |||||  |||||||||| | |||  |||    
T  55783440 gtgaaatgatttaggatttgagtttctattcatataaaagaggtaatgaagtgattttctatatttgggacaagtttaagtatgggttcggagtacgtac 55783539  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatc 250  Q
    ||||  |||| ||| ||||| | ||||| ||||||||||||    
T  55783540 ctattacctcattaaccgtctcatacccttgttttaaaatc 55783580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 250
Target Start/End: Original strand, 55847622 - 55847762
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| ||||||  |||||||||||||| ||||||||| |||| | || |||||||||| ||| | ||| |||||  |||||||||| | |||  |||    
T  55847622 gtgaaatgatttaggatttgagtttctattcatataaaagaggtaatgaagtgattttctatatttgggacaagtttaagtatgggttcggagtacgtac 55847721  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatc 250  Q
    ||||  |||| ||| ||||| | ||||| ||||||||||||    
T  55847722 ctattacctcattaaccgtctcatacccttgttttaaaatc 55847762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 5902719 - 5902640
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttt 243  Q
    |||| |||||| | |||| |||||||||||||||| |||| | ||||||||| | ||||||||||||| |||||||||||    
T  5902719 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttt 5902640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 7608960 - 7609039
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttt 243  Q
    |||| |||||| | |||| |||||||||||||||| |||| | ||||||||| | ||||||||||||| |||||||||||    
T  7608960 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttt 7609039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 30034610 - 30034681
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacg 181  Q
    ||||||| |||||| ||||| ||||||||||||||||| | |||||||||||||||||  ||||||| ||||    
T  30034610 gtgaaatgatttagggtttgggtttctatttatataaatgaggtagtaaattgatttttaacattcgagacg 30034681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 44317525 - 44317604
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttt 243  Q
    |||| |||||| | |||| |||||||||||||||| |||| | ||||||||| | ||||||||||||| |||||||||||    
T  44317525 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttt 44317604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 25265302 - 25265229
Alignment:
Q  113 aaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttg 187  Q
    |||| ||||||| |||||||||||||||||||| ||| | || ||||||||||||||||||||| || |||||||    
T  25265302 aaatgatttagaatttgagtttctatttatatagaag-gataataaattgattttctacattcgagatgagtttg 25265229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 47103747 - 47103829
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    |||||||||||||||| |||| | ||| ||||||| ||||||||| ||||||||||| |||| ||||  |||||||| |||||    
T  47103747 gtttgggtatgggttcggggtgggtacatatatccgcgttacccgccccgtacccgtattttgaaattggggaaaacccaaac 47103829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 228
Target Start/End: Complemental strand, 12505688 - 12505571
Alignment:
Q  111 tgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacc 210  Q
    |||||| |||||  |||| |||||||||||||||||||| || | ||||||||| || ||| |||  |||| ||||||||||| ||||||||| | |||     
T  12505688 tgaaatgatttaatgtttaagtttctatttatataaaaggggaaataaattgatgttttaccttcaggacgggtttgggtatgagttcagggtgggtact 12505589  T
Q  211 tatatcctcgttacccgt 228  Q
     |||||| | ||||||||    
T  12505588 aatatccccattacccgt 12505571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 265
Target Start/End: Complemental strand, 23927773 - 23927645
Alignment:
Q  136 tatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtac 235  Q
    ||||||||  |||| |||| |||||| |||||||| ||||| || ||||||||||| |||||| |||| |||||||||||||  |||| |||||  ||||    
T  23927773 tatttataataaagaggtaataaattaattttcta-attcgagatgagtttgggtaggggttcggggtggatacctatatccatgttaaccgtcttgtac 23927675  T
Q  236 ccgtgttttaaaatcagggaaaactcaaac 265  Q
      ||||||| |||||  | |||||||||||    
T  23927674 ttgtgttttgaaatcgagcaaaactcaaac 23927645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 37349112 - 37349177
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgt 228  Q
    ||||||| |||||| |||| ||||||||||||||||||||| ||||||||||| | | ||||||||    
T  37349112 attttctgcattcgggacgggtttgggtatgggttcagggtggatacctatatacccattacccgt 37349177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 11028082 - 11028158
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||||||||| |||| |||| | ||||||||| | ||||||||||||| |||||||||||| | ||| ||||||||    
T  11028082 gtttgggtatgagttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaac 11028158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 265
Target Start/End: Complemental strand, 14606029 - 14605929
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    |||||||||||  |  |||||||||||||||||| |||| | ||| |||||||  |||||||||| ||||||||| |||| ||||| | |||||| ||||    
T  14606029 tttctacattcaggtagagtttgggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaa 14605930  T
Q  265 c 265  Q
    |    
T  14605929 c 14605929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 30266416 - 30266360
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgt 239  Q
    |||||||||||||||| |||| ||||| ||||||| |||||||||||| ||||||||    
T  30266416 gtttgggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgt 30266360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 30285772 - 30285828
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgt 239  Q
    |||||||||||||||| |||| ||||| ||||||| |||||||||||| ||||||||    
T  30285772 gtttgggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgt 30285828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 31752445 - 31752541
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| || ||||||||||||| |||| |  |||||||| |||||||| |||| | |||||||||||| ||||| ||||||||    
T  31752445 attttttacatttgggacgggtatgggtatgggttcggggtgggaacctatatactcgttactcgtctcatacccgtgttttgaaatcggggaaaac 31752541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 11122974 - 11122895
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttt 243  Q
    |||| |||||| | |||| ||||| |||||||||| |||| | ||||||||| | ||||||||||||| |||||||||||    
T  11122974 ttttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttt 11122895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 19534444 - 19534543
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    |||||||||||||| |||| ||||||||||| ||||  ||| | ||||||||| |  |||||||||||| |||||   |||||||||| | |||||||||    
T  19534444 attttctacattcgtgacgggtttgggtatgagttcgaggtgggtacctatatacctgttacccgtcccatacccagattttaaaatcggagaaaactca 19534543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 37926498 - 37926585
Alignment:
Q  113 aaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcag 200  Q
    |||| ||||| |||||||||||| ||| |||| |||| | || |||||| |||| ||||||||  || ||||||||||||||||||||    
T  37926498 aaatgatttaaagtttgagtttcaattgatatgaaagggataataaattaatttactacattcaggatgagtttgggtatgggttcag 37926585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 40420723 - 40420656
Alignment:
Q  131 gtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttc 198  Q
    ||||||||||||||||||| |||| |||| |||||||||||||||| |  | |||||||||| |||||    
T  40420723 gtttctatttatataaaaggggtaataaagtgattttctacattcggggtgggtttgggtataggttc 40420656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 43893218 - 43893297
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttt 243  Q
    |||| |||||| | |||| |||||||||||  ||| |||| ||||||||||| | ||||||||||||| |||||||||||    
T  43893218 ttttttacatttgggacgggtttgggtatgaattcggggtggatacctatatacccgttacccgtcccatacccgtgttt 43893297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 176
Target Start/End: Complemental strand, 50376507 - 50376444
Alignment:
Q  113 aaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcg 176  Q
    ||||||||||| |||| |||||||||||||||||||  |  | |||||||||||||||||||||    
T  50376507 aaataatttagcgttttagtttctatttatataaaatggaaaataaattgattttctacattcg 50376444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 250
Target Start/End: Original strand, 43553412 - 43553522
Alignment:
Q  140 tatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgt 239  Q
    |||||||||| |||| ||||||||||||| ||||||| ||||||||| | |||| |||| |||| |||  |||||| |   || | |||||| |||||||    
T  43553412 tatataaaaggggtaataaattgattttcaacattcgggacgagtttcgatatgagttcggggtggatgtctatattcatattgctcgtcccatacccgt 43553511  T
Q  240 gttttaaaatc 250  Q
    ||||| |||||    
T  43553512 gttttgaaatc 43553522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 274
Target Start/End: Complemental strand, 10574523 - 10574414
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    |||||||||||| |  | ||||||||||| |||| |||  | ||| ||||||| |||||||||||||||||| || || | ||||| ||||||| |||||    
T  10574523 tttctacattcgggtagggtttgggtatgagttcggggcgggtacatatatccccgttacccgtcccgtacctgtattatgaaatcggggaaaattcaaa 10574424  T
Q  265 cttagtcaaa 274  Q
    |  |||||||    
T  10574423 cccagtcaaa 10574414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 33616274 - 33616209
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattc 175  Q
    ||||||| |||||| ||||   ||| |||||||||||||| |||| ||||||||||||||||||||    
T  33616274 gtgaaatgatttagggttttgatttttatttatataaaaggggtaataaattgattttctacattc 33616209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 6482126 - 6482039
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    |||| |||||||||||||||| |||| | ||| ||||| | | |||| |||||| |||||||||||| ||||  |||||||| |||||    
T  6482126 gacgggtttgggtatgggttcggggtgggtacatatataccctttactcgtcccatacccgtgtttttaaattggggaaaacccaaac 6482039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 21544588 - 21544655
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatc 250  Q
    |||||||||||||||| |||| | ||| ||||||| | ||||| ||||||||||||| |||| |||||    
T  21544588 gtttgggtatgggttcggggtgggtacatatatccccattacctgtcccgtacccgtattttgaaatc 21544655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 31782622 - 31782713
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaa 274  Q
    ||||||||||| |||  |||| | ||| ||||||| ||||||| || |||||||||| |||| ||||| |||||||| |||||  |||||||    
T  31782622 gtttgggtatgagtttggggtgggtacatatatccccgttacctgtaccgtacccgtattttgaaatcggggaaaacccaaacccagtcaaa 31782713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 54270583 - 54270658
Alignment:
Q  141 atataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatc 216  Q
    ||||||||| |||| ||||||||||||||||||||  || |||||||  |||||||||| |||  |||| ||||||    
T  54270583 atataaaagaggtaataaattgattttctacattctagaagagtttgaatatgggttcaaggtgaatacatatatc 54270658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 55826728 - 55826649
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttt 243  Q
    |||| |||||| | |||| |||||| ||||||||| |||| | ||||||||| | ||||||||||||| |||| ||||||    
T  55826728 ttttttacatttgggacgggtttggatatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgttt 55826649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 3737789 - 3737851
Alignment:
Q  187 gggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaat 249  Q
    |||||||||||| || | | ||| |||| |||||||||||||||| |||||||||||| ||||    
T  3737789 gggtatgggttcgggatgggtacatataacctcgttacccgtcccatacccgtgttttgaaat 3737851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 24474582 - 24474524
Alignment:
Q  128 tgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagttt 186  Q
    |||||||||||||||||||||| | ||  || |||||||| |||||||| |||||||||    
T  24474582 tgagtttctatttatataaaagggataaaaatttgattttttacattcgggacgagttt 24474524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 10302040 - 10302169
Alignment:
Q  131 gtttctatttatataaaagc-ggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtc 229  Q
    |||||||||||||||||||  ||||  ||| | ||||| |||||| | ||||  | ||||||||||||| |||| | ||| |||| || |||||||||||    
T  10302040 gtttctatttatataaaaggtggtaaaaaagtaattttttacatttgggacggatatgggtatgggttcggggtgggtacatataaccccgttacccgtc 10302139  T
Q  230 ccgtacccgtgttttaaaatcagggaaaac 259  Q
     | |||||||  ||| ||||| ||||||||    
T  10302140 tcatacccgtactttgaaatcggggaaaac 10302169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 17113219 - 17113178
Alignment:
Q  63 aaagagagaactatgacaagtgaatgtcatctgaaagactga 104  Q
    ||||||| |||||||| |||||| ||||||||||||||||||    
T  17113219 aaagagataactatgataagtgagtgtcatctgaaagactga 17113178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 102
Target Start/End: Original strand, 25941022 - 25941055
Alignment:
Q  69 agaactatgacaagtgaatgtcatctgaaagact 102  Q
    |||||||||| |||||||||||||||||||||||    
T  25941022 agaactatgataagtgaatgtcatctgaaagact 25941055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 48459493 - 48459566
Alignment:
Q  186 tgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||||||||||| |||| | ||||||||| |  ||||||||| || ||||| |||||| ||||| ||||||||    
T  48459493 tgggtatgggttcggggtgggtacctatatacctgttacccgttccatacccatgttttgaaatcggggaaaac 48459566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 4652679 - 4652743
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgtt 242  Q
    |||| ||||||||||| |||||  ||   ||||||||||| ||||||||||| ||||||||||||    
T  4652679 gacgggtttgggtatgagttcaaagtgcgtacctatatccccgttacccgtctcgtacccgtgtt 4652743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 7334173 - 7334113
Alignment:
Q  281 aaaacctgttaaattagatttggttcaaccggataccctcatgtatgagttttgttgccat 341  Q
    |||||| || ||||||| |||||||||  ||||||||| || ||||| |||||||||||||    
T  7334173 aaaacccgtcaaattaggtttggttcaggcggatacccgcaagtatgggttttgttgccat 7334113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 8844021 - 8843985
Alignment:
Q  63 aaagagagaactatgacaagtgaatgtcatctgaaag 99  Q
    |||||||||||||||| |||||| |||||||||||||    
T  8844021 aaagagagaactatgataagtgagtgtcatctgaaag 8843985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 8856985 - 8856949
Alignment:
Q  63 aaagagagaactatgacaagtgaatgtcatctgaaag 99  Q
    |||||||||||||||| |||||| |||||||||||||    
T  8856985 aaagagagaactatgataagtgagtgtcatctgaaag 8856949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 9230271 - 9230355
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaa 247  Q
    ||||||| |||||| |||| |||||| |||| |||  || | ||||||||||| ||||||| ||||||  |||||||||| ||||    
T  9230271 attttctgcattcgggacgggtttggttatgagtttgggatggatacctatatactcgttatccgtcctatacccgtgttataaa 9230355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 25265226 - 25265174
Alignment:
Q  207 tacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||| |||| |||||||  |||||||||| |||||||||||| ||||||||    
T  25265226 tacctacatccacgttacctatcccgtacccatgttttaaaatcggggaaaac 25265174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 33916146 - 33916246
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||| |||||| | || ||||||||||||| |||  |||||| ||| |||||||   ||| ||||| |||| ||||| ||| ||||| |||||||||||    
T  33916146 attttttacatttgggatgagtttgggtatgagttttgggtaggtacttatatccctattatccgtctcgtatccgtgatttgaaatccgggaaaactca 33916245  T
Q  263 a 263  Q
    |    
T  33916246 a 33916246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 42299794 - 42299846
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcc 230  Q
    |||| ||||| ||||||||||||||| | ||||||||| | ||||||||||||    
T  42299794 gacgtgtttgagtatgggttcagggtgggtacctatatacccgttacccgtcc 42299846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 50684476 - 50684552
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||||||||| |||| || | | || |||||||  |||||||||||||||| |||| |||||||||| ||| ||||    
T  50684476 gtttgggtatgagttccggatgggtatctatatctccgttacccgtcccgtatccgtattttaaaatcggggtaaac 50684552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 9e-37; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 110 - 252
Target Start/End: Complemental strand, 30904973 - 30904832
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| ||| || ||||| ||||||||||||||||||| |||||||||||||||| ||||||||| ||||  ||||||||||||||| |||| | |||    
T  30904973 gtgaaatgattaagggtttgggtttctatttatataaaaggggtagtaaattgatttcctacattcgagacggatttgggtatgggttcggggtgggtac 30904874  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcag 252  Q
    |||||||| || ||||||||||||||||||||||| |||||||    
T  30904873 ctatatccccg-tacccgtcccgtacccgtgttttgaaatcag 30904832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 111 - 217
Target Start/End: Original strand, 40890278 - 40890383
Alignment:
Q  111 tgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacc 210  Q
    |||||| || ||||||||||||||||||||||||| ||| | || ||||||||||||||||||| | || ||| |||||||||||||| | ||||||||     
T  40890278 tgaaatgatctagagtttgagtttctatttatatagaag-gataataaattgattttctacatttgagatgagcttgggtatgggttcggcgtagatact 40890376  T
Q  211 tatatcc 217  Q
    |||||||    
T  40890377 tatatcc 40890383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 53631887 - 53631989
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    |||||||| ||||| |||||||||| |||||||||| |||| | ||||||||| | ||||||||||| | ||| |||||||||||||  |||||||||||    
T  53631887 attttctagattcgggacgagtttgagtatgggttcggggtgggtacctatatacccgttacccgtctcatacacgtgttttaaaatttgggaaaactca 53631986  T
Q  263 aac 265  Q
    |||    
T  53631987 aac 53631989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 4016148 - 4016047
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaa 263  Q
    |||||| |||||| ||||||||||||||||||||| | || | ||||||||| | ||||| ||||||| ||||| |||||| ||||| |||||||| |||    
T  4016148 ttttctgcattcgggacgagtttgggtatgggttcggagtgggtacctatatacccgttatccgtcccatacccatgttttgaaatcggggaaaacccaa 4016049  T
Q  264 ac 265  Q
    ||    
T  4016048 ac 4016047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 164 - 341
Target Start/End: Complemental strand, 23547046 - 23546863
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaa------ 257  Q
    |||| |||||| | ||||||||||||||||||||| |||| | ||||||||| | ||||||||||||| |||||||||||  | ||| ||||||          
T  23547046 ttttttacatttgggacgagtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccat 23546947  T
Q  258 actcaaacttagtcaaaatggagaaaacctgttaaattagatttggttcaaccggataccctcatgtatgagttttgttgccat 341  Q
    || |||||  |||||||| || ||||||| |||||||| | |||||||||  ||| || || |  ||||| |||||||||||||    
T  23546946 acccaaacccagtcaaaacggggaaaacccgttaaattgggtttggttcatgcgggtaaccacgggtatgggttttgttgccat 23546863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 48390922 - 48390826
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| ||| |||| |||| || |||||||||||||||| | | ||||||||| | ||||||||||||| |||||||||||| ||||| ||||||||    
T  48390922 attttttacgttcgggacgggtatgggtatgggttcaggatgggtacctatattcccgttacccgtcccatacccgtgttttgaaatcggggaaaac 48390826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 249
Target Start/End: Complemental strand, 3385988 - 3385875
Alignment:
Q  136 tatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtac 235  Q
    |||||||| ||||| | || |||| ||||||| |||||| |  ||| |||| ||||||| |||  ||| | ||||||||||||||||||| |||||||||    
T  3385988 tatttatagaaaagggttactaaaatgattttttacattaggtacgggttttggtatggattcgtggtggctacctatatcctcgttacctgtcccgtac 3385889  T
Q  236 ccgtgttttaaaat 249  Q
    ||||||||| ||||    
T  3385888 ccgtgttttgaaat 3385875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 4557389 - 4557308
Alignment:
Q  184 tttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    ||||||||||||||| |||| | ||||||||| ||||||||||||||| ||||| |||||| ||| | |||||||| |||||    
T  4557389 tttgggtatgggttcggggtgggtacctatatactcgttacccgtcccatacccatgttttgaaaacggggaaaacccaaac 4557308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 34025937 - 34026033
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| || |||||||| |||| |||| || |||||||| ||||||||||||||| |||| ||||||| ||||| ||||||||    
T  34025937 attttttacatttgggacgggtatgggtatgagttcggggtggaaacctatatactcgttacccgtcccatacctgtgttttgaaatcggggaaaac 34026033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 44106897 - 44106801
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| ||||| |||||||||| ||||||||||||||||   |||||| |||||| |||||||||||||| ||  ||||||||    
T  44106897 attttttacatttgggacgggtttgagtatgggttcggggtagatacctatatatccgttacgcgtcccatacccgtgttttaagattggggaaaac 44106801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 44172609 - 44172705
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| |||||||||||||||| |||| | ||| ||||| | ||||||||||||| |||||||||||| | ||| ||||||||    
T  44172609 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaac 44172705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 44179309 - 44179405
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| |||||||||||||||| |||| | ||| ||||| | ||||||||||||| |||||||||||| | ||| ||||||||    
T  44179309 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaac 44179405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 49580047 - 49580143
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| ||||| ||||||||||  ||| | ||||||||| ||||||||||||||| |||||||||||| | ||| ||||||||    
T  49580047 attttttacatttgggacgggtttgagtatgggttcgaggtgggtacctatatactcgttacccgtcccatacccgtgttttgagatcggggaaaac 49580143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 265
Target Start/End: Original strand, 27937669 - 27937823
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||| ||||  |||||||||||||||||||| ||| |||||| |||| ||||||||  |  | ||||||||||| ||||  |||   |||    
T  27937669 gtgaaatgatttagggtttaggtttctatttatataaaagctgtaataaattaatttcctacattcaggtag-gtttgggtatgagttcgtggtgtgtac 27937767  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    || |||||  |||||| ||||  ||| | ||||||||||||| |||||||||||||    
T  27937768 ctctatccctgttacctgtcctatacacatgttttaaaatcaaggaaaactcaaac 27937823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 266
Target Start/End: Original strand, 42243346 - 42243473
Alignment:
Q  139 ttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccg 238  Q
    ||||||||||| |||| |||||||||||||||||||   || | |||||||||||  ||  |||| ||||  |||||||||||||||| || | ||||||    
T  42243346 ttatataaaaggggtaataaattgattttctacatttaggatgggtttgggtatgaatttggggtggataaatatatcctcgttacccatctcatacccg 42243445  T
Q  239 tgttttaaaatcagggaaaactcaaact 266  Q
    ||| || ||||| || ||||| ||||||    
T  42243446 tgtattgaaatcgggaaaaacccaaact 42243473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 266
Target Start/End: Original strand, 42758357 - 42758460
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||||| | |||| |||| |||||||||||||||| ||||  |||||||||| |  |||||||||||| |||| ||||||| ||||| ||| |||| ||    
T  42758357 attttcttcgttcgggacgggtttgggtatgggttcggggtgcatacctatatacctgttacccgtcccatacctgtgttttgaaatcgggggaaaccca 42758456  T
Q  263 aact 266  Q
    ||||    
T  42758457 aact 42758460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 7469877 - 7469787
Alignment:
Q  169 tacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||| | |||| ||||| |||||||||| |||| | ||||||||| | ||||||||||||| |||||||||||  | ||||||||||||    
T  7469877 tacatttgggacgggtttgtgtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcagggaaaac 7469787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 34119660 - 34119742
Alignment:
Q  184 tttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    ||||||||||||||| |||| | ||||||||| |  |||| ||||| | |||||||||||||||||| || ||||||||||||    
T  34119660 tttgggtatgggttcggggtgggtacctatatacctgttatccgtctcatacccgtgttttaaaatcgggaaaaactcaaact 34119742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 830992 - 831072
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgtttt 244  Q
    ||||||| |||||| ||||| |||||||||||||||||||| | |||| |||| ||||||| ||||| | ||||||||||||    
T  830992 attttctgcattcgggacgaatttgggtatgggttcagggtgggtacc-atatactcgttatccgtctcatacccgtgtttt 831072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 243
Target Start/End: Original strand, 27252391 - 27252628
Alignment:
Q  23 tatgatgattgagaagagag--gccgagagtgtgagatattgaa------agagagaactatgacaagtgaatgtcatctgaaagactgat--------- 105  Q
    |||| |||||||||||||||  |||||||||||||||||| |||      ||||||||||| || |||||| |||||||||||||||||||             
T  27252391 tatggtgattgagaagagagaggccgagagtgtgagatatggaaggagaaagagagaactaagataagtgagtgtcatctgaaagactgatactctaact 27252490  T
Q  106 --gtatgtgaaataattta-gagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcaggg 202  Q
      ||  ||||||| ||||| || |||| ||||||||||||||||||  |||| ||||||||  ||||||||||  |  |||||||||||||||||||       
T  27252491 gtgtgagtgaaatgatttatgattttg-gtttctatttatataaaatgggtaataaattgaaattctacattcagggtgagtttgggtatgggttca--a 27252587  T
Q  203 tagatacctatatcctcgttacccgtcccgtacccgtgttt 243  Q
    | | ||||||||||   |||| ||||||||||||| |||||    
T  27252588 tgggtacctatatcactgttatccgtcccgtacccatgttt 27252628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 37032256 - 37032191
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattc 175  Q
    ||||||| |||||| |||||||||| |||||||||||||  |||| |||||| |||||||||||||    
T  37032256 gtgaaatgatttagggtttgagtttttatttatataaaatgggtaataaattaattttctacattc 37032191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 44639277 - 44639338
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgtttt 244  Q
    |||||||||||||||| |||| | ||||||||| | ||||||||||||| ||||||||||||    
T  44639277 gtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttt 44639338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 265
Target Start/End: Original strand, 4553136 - 4553275
Alignment:
Q  125 gtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttac 224  Q
    |||||||||| |||||||||||||    || |||||||||||| |||||||| |||| ||||| |||||||||| ||||   ||  |||||||   ||||    
T  4553136 gtttgagtttttatttatataaaaaaa-taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtatttatatccctattac 4553234  T
Q  225 ccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    |||| ||| |||| |||||| ||||| || |||||||||||    
T  4553235 ccgttccgcacccatgttttgaaatcgggaaaaactcaaac 4553275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 29842291 - 29842386
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| || || |||||||||| |||| | ||||||||| | ||||||| ||||| |||||||||||||||||| ||||||||    
T  29842291 attttttacatttgagacgggtatgagtatgggttcggggtgggtacctatattcccgttaccagtcccatacccgtgttttaaaatc-gggaaaac 29842386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 19111737 - 19111820
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    ||||||| ||||||| ||||| | ||| ||||| | ||||| || ||||||||||||||||| ||||| || ||||||||||||    
T  19111737 gtttgggcatgggtttagggtgggtacttatatacccgttatccatcccgtacccgtgttttgaaatcgggaaaaactcaaact 19111820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 30616363 - 30616284
Alignment:
Q  186 tgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    ||||||||||||| |||| | ||  |||| |||||||||||||||| || ||||||||| ||||| |||||||| |||||    
T  30616363 tgggtatgggttcggggtggttatatataacctcgttacccgtcccatatccgtgttttgaaatcggggaaaacccaaac 30616284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 39655377 - 39655282
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||| |||||| | |||| |||||||||||||||  |||| | ||||||||| |  |||||||||||| |||||||||||| | ||| ||||||||    
T  39655377 ttttttacatttgagacgggtttgggtatgggtttggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaac 39655282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 54317142 - 54317229
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    |||| ||||||| |||||||| |||| | ||||||||| | ||||||||||||  |||  ||||||| ||||| ||||||||||||||    
T  54317142 gacgggtttgggaatgggttcggggtgggtacctatatacccgttacccgtcctatacttgtgttttgaaatcggggaaaactcaaac 54317229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 29284334 - 29284399
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttt 243  Q
    |||| |||||||||||||||| || | | ||||||||| | ||||||||||||| |||||||||||    
T  29284334 gacgggtttgggtatgggttcgggctgggtacctatatacccgttacccgtcccatacccgtgttt 29284399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 31126899 - 31126826
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtaccc 237  Q
    |||||| |||| | |||||||||||||||| |||| |||| ||||||||||| |  |||||||||||| |||||    
T  31126899 ttttctgcatttgggacgagtttgggtatgagttcggggtggatacctatatacatgttacccgtcccataccc 31126826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 52198158 - 52198219
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgtttt 244  Q
    |||||||||||||||| |||| | ||||||||| | ||||||||||||| |||| |||||||    
T  52198158 gtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgtttt 52198219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 275
Target Start/End: Original strand, 49025664 - 49025775
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||| |||||| | |||| |||||||||||||||| || |   ||||||||| |  |||||||||||| |||||||||||| | ||| |||||||| ||    
T  49025664 attttttacatttgggacgggtttgggtatgggttc-ggatgtgtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaaccca 49025762  T
Q  263 aacttagtcaaaa 275  Q
    |||  ||||||||    
T  49025763 aacccagtcaaaa 49025775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 10043364 - 10043285
Alignment:
Q  186 tgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    ||||||||||||| |||| | | | |||| || ||||||||||||| ||||| |||||| ||| |||||||||| |||||    
T  10043364 tgggtatgggttcggggtgggtgcatataaccccgttacccgtcccatacccatgttttgaaaccagggaaaacccaaac 10043285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 259
Target Start/End: Original strand, 34154398 - 34154493
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||| |||||| | |||| || ||||||||||||| |||| | ||||||||| || |||||||||  | ||||| |||||| ||||| ||||||||    
T  34154398 ttttttacatttgggacgggtatgggtatgggttcggggtgggtacctatattcttgttacccgtttcatacccatgttttgaaatcggggaaaac 34154493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 40890180 - 40890223
Alignment:
Q  14 atcaatgactatgatgattgagaagagaggccgagagtgtgaga 57  Q
    |||||||||||||||||| ||||||||||| || ||||||||||    
T  40890180 atcaatgactatgatgatggagaagagaggtcgggagtgtgaga 40890223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 44953539 - 44953444
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||| |||||| | |||| ||||| ||||| |||| ||||   ||||||||| | ||||||||||||| |||||||||||| | ||| ||||||||    
T  44953539 ttttttacatttgggacgggtttgagtatgagttcggggtgagtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaac 44953444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 772936 - 772892
Alignment:
Q  125 gtttgagtttctatttatataaaagcggtagtaaattgattttcta 170  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||||    
T  772936 gtttgagtttctatttatacaaaag-ggtaataaattgattttcta 772892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 39728654 - 39728735
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgtttt 244  Q
    ||||| |||||| | |||| |||||||||||||||| |||| | ||| ||||| | |||||||| |||| ||||||| ||||    
T  39728654 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccatcccatacccgtatttt 39728735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 44252745 - 44252810
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttt 243  Q
    |||| |||||||||||||||| |||| | ||||||||| |  ||||| |||||| |||||||||||    
T  44252745 gacgggtttgggtatgggttcggggtgggtacctatatacctgttacacgtcccatacccgtgttt 44252810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 22535931 - 22535847
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||||| || |||||||||| |||| | | ||| ||| | ||||||||||||| || ||||||||| ||||  |||||||||||    
T  22535931 gacgagtatgtgtatgggttcggggtgggtgcctgtatacccgttacccgtcccatatccgtgttttgaaattggggaaaactca 22535847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 262
Target Start/End: Original strand, 43582588 - 43582659
Alignment:
Q  190 tatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||||||| |||| | |||||| || | ||||||||||| | |||||||||||| ||||| |||||||||||    
T  43582588 tatgggttc-gggtgggtacctacatacacgttacccgtctcatacccgtgttttgaaatcggggaaaactca 43582659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 5e-35; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 110 - 258
Target Start/End: Original strand, 29292637 - 29292787
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtag--at 207  Q
    |||||||||||||| |||||  ||||| |||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||| ||||| |   |    
T  29292637 gtgaaataatttagggtttggatttctctttatataaaaggggtagtaaattgattttctacattcgagacgagtttaggtatgggtttagggtgggcgt 29292736  T
Q  208 acctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaa 258  Q
    ||||||||||  ||||||| || |||||||||||||| ||||| |||||||    
T  29292737 acctatatccatgttacccatctcgtacccgtgttttgaaatcggggaaaa 29292787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 110 - 306
Target Start/End: Complemental strand, 19440169 - 19439972
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttct-acattcgcgacgagtttgggtatgggttcagggtagata 208  Q
    ||||||| |||||||||||| |||||||||||||  |||| ||| ||||||||||||| | ||||||| |||| ||||||||||||||||   || | ||    
T  19440169 gtgaaatgatttagagtttgggtttctatttataccaaaggggtggtaaattgatttttttacattcgggacgggtttgggtatgggttcgaagtgggta 19440070  T
Q  209 cctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaatggagaaaacctgttaaattagatttggttc 306  Q
    | ||||||| | |||||| ||||  ||||||||||| ||||||||||||||||||||  |||||||  || ||||||| || ||||| | ||||||||    
T  19440069 catatatccccattacccatcccaaacccgtgttttcaaatcagggaaaactcaaacccagtcaaagcggggaaaacccgtcaaattgggtttggttc 19439972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 125 - 265
Target Start/End: Original strand, 3774019 - 3774159
Alignment:
Q  125 gtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttac 224  Q
    ||||| ||| ||| ||||||||||| |||| ||||||||||||||| ||||| ||||  |||| ||||||||||||||| | ||||||||||||||||||    
T  3774019 gtttgggttcctaattatataaaaggggtaataaattgattttctaaattcgggacggatttgagtatgggttcagggtgggtacctatatcctcgttac 3774118  T
Q  225 ccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    ||||| ||| ||| | || |||| |  ||||||||||||||    
T  3774119 ccgtctcgtgcccattttataaagttggggaaaactcaaac 3774159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 110 - 295
Target Start/End: Complemental strand, 23475422 - 23475236
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattga-ttttctacattcgcgacgagtttgggtatgggttcagggtagata 208  Q
    ||||||| |||||||||||| |||| |||||||| ||||  ||||||||||||| |||| |||||||| |||| ||||||||||||||||   || | ||    
T  23475422 gtgaaatgatttagagtttgggtttttatttatacaaaacgggtagtaaattgatttttttacattcgggacgggtttgggtatgggttcgaagtgggta 23475323  T
Q  209 cctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaatggagaaaacctgttaaatt 295  Q
    | ||||||| | |||||| ||||  ||||||||||| ||||| || ||||| |||||  |||||||  || ||||||| || |||||    
T  23475322 catatatccccattacccatcccaaacccgtgttttgaaatcgggaaaaacccaaacccagtcaaagcggggaaaacccgtcaaatt 23475236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 265
Target Start/End: Original strand, 4101477 - 4101632
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| ||| || |||||||||| |||||| ||||||  |||| ||||||||||||| ||||||  |||| ||| ||||||||||||||| | | |||    
T  4101477 gtgaaatgattaagggtttgagtttttatttaaataaaattggtaataaattgattttcaacattcaggacgggttagggtatgggttcaggatgggtac 4101576  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
     |||||||  || |||| ||| ||||| ||||||| |||||| ||||||| |||||    
T  4101577 atatatccctgtaacccatcctgtacctgtgttttgaaatcatggaaaacccaaac 4101632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 110 - 274
Target Start/End: Complemental strand, 23533763 - 23533598
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggt-agtaaattgattttct-acattcgcgacgagtttgggtatgggttcagggtagat 207  Q
    ||||||| |||||||||||| ||||||| ||||| ||||| ||| |||||||||||||| | ||||||| |||||||||||||||||||||   || | |    
T  23533763 gtgaaatgatttagagtttgggtttctaattatacaaaaggggttagtaaattgatttttttacattcgggacgagtttgggtatgggttcgaagtgggt 23533664  T
Q  208 acctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaa 274  Q
    || ||||||| | |||||| || | ||||||| |||| ||||| |||||||| |||||  |||||||    
T  23533663 acatatatcc-cattacccatcgcatacccgtattttcaaatcggggaaaacccaaacccagtcaaa 23533598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 274
Target Start/End: Original strand, 28309482 - 28309591
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    |||||||||||| |  | ||||||||||| |||| |||||||||| ||||| | ||||||||||||||||||||| |||| |||||||||| ||| ||||    
T  28309482 tttctacattcgggtagggtttgggtatgagttcggggtagatacatatattcccgttacccgtcccgtacccgtattttgaaatcagggagaacccaaa 28309581  T
Q  265 cttagtcaaa 274  Q
    | ||| ||||    
T  28309582 cctagacaaa 28309591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 307
Target Start/End: Complemental strand, 43550574 - 43550378
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||| ||||| ||||||||||||||| ||| |||| ||||| || |||| ||||||  |||| ||||| ||||| |||| ||||   |||    
T  43550574 gtgaaatgatttagggtttgggtttctatttatatagaaggggtaataaatagactttccacattcaggacgggtttgtgtatgagttc-gggtgagtac 43550476  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaatggagaaaacctgttaaattagatttggttca 307  Q
     |||||||   ||||| ||| |||| | ||||||||||| | ||||||||||||||  | ||||||||| ||||||| || ||||||| |||| ||||    
T  43550475 atatatccctattaccagtctcgtatctgtgttttaaaaacggggaaaactcaaacccaatcaaaatggggaaaacccgtcaaattaggtttgattca 43550378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 27850431 - 27850335
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||||||||||| |||| |||||||||||||||| || | | ||||||||  | ||||||||||||| |||||||||||| ||||| ||||||||    
T  27850431 attttctacattcgggacgggtttgggtatgggttcgggatgggtacctatacacccgttacccgtcccatacccgtgttttgaaatcggggaaaac 27850335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 266
Target Start/End: Complemental strand, 30839219 - 30839136
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    ||||||| ||| |||| |||||||||| ||||||| |||||| |||||| ||||||| |||| |||||||||||||||||||||    
T  30839219 gtttgggcatgagttcggggtagatacatatatccacgttactcgtcccatacccgtattttgaaatcagggaaaactcaaact 30839136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 191 - 341
Target Start/End: Original strand, 24425396 - 24425546
Alignment:
Q  191 atgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaatggagaaaacctgtt 290  Q
    ||||| ||||||| | ||||||||| | ||||||||||||| |||||||||||| ||||||| ||||| ||||||  | |||||| |||||||| | ||     
T  24425396 atggggtcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcagagaaaattcaaacccaatcaaaacggagaaaatccgtc 24425495  T
Q  291 aaattagatttggttcaaccggataccctcatgtatgagttttgttgccat 341  Q
    ||||| | ||||||||   | | || || | ||||||||||||||||||||    
T  24425496 aaattgggtttggttcgggctggtaaccacgtgtatgagttttgttgccat 24425546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 31345461 - 31345527
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcg 176  Q
    ||||||| || ||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  31345461 gtgaaatgatatagagtttgagtttctatttatataaaaatggtagtaaattgattttttacattcg 31345527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 126 - 259
Target Start/End: Original strand, 3157034 - 3157167
Alignment:
Q  126 tttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacc 225  Q
    |||| |||||||||||||||  || |||| |||||||||||||||  || | |||| |||||||||| ||||| | || | ||||||||||| ||||| |    
T  3157034 tttgggtttctatttatatagtaggggtaataaattgattttctatgtttgggacgggtttgggtataggttcggtgtgggtacctatatccccgttatc 3157133  T
Q  226 cgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||| ||||| | |||| ||||| ||||||||    
T  3157134 cgtcccatacccatattttgaaatcggggaaaac 3157167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 259
Target Start/End: Original strand, 35074459 - 35074554
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||| |||||| | |||| |||||||||||||||| || | | ||||||||| | ||||||||||||| |||||||||||||| ||| ||||||||    
T  35074459 ttttttacatttgggacgggtttgggtatgggttcgggttgggtacctatatacccgttacccgtcccatacccgtgttttaagatcggggaaaac 35074554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 18825957 - 18825875
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    ||||||||| |||||| |||| | ||||||||| | ||||||||||||| |||||||||||| ||||| |||||||| |||||    
T  18825957 gtttgggtacgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaac 18825875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 265
Target Start/End: Original strand, 26622955 - 26623041
Alignment:
Q  179 acgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    |||||||||||||||||||| |||| | ||| ||||| | | |||||| |||| |||||||||||| |||||||||||||| |||||    
T  26622955 acgagtttgggtatgggttcggggtgggtacttatatacccattacccatcccatacccgtgttttgaaatcagggaaaacccaaac 26623041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 275
Target Start/End: Original strand, 3920526 - 3920638
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    |||||||||||||| |||   ||||||||||||||| |||| | ||||||||| |  |||| ||||||| |||| ||||||| ||||| |||||||| ||    
T  3920526 attttctacattcgggacagttttgggtatgggttcggggtgggtacctatatacctgttatccgtcccataccagtgttttgaaatcggggaaaaccca 3920625  T
Q  263 aacttagtcaaaa 275  Q
    |||  ||||||||    
T  3920626 aacccagtcaaaa 3920638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 295
Target Start/End: Original strand, 16811718 - 16811849
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||| |||||| | ||||  ||||||||||||||| |||| | || |||||| | | ||| ||||| | |||||||||||| | ||| |||||||  ||    
T  16811718 attttttacatttgggacggctttgggtatgggttc-gggtgggtatctatatacccattatccgtctcatacccgtgttttgagatcggggaaaatcca 16811816  T
Q  263 aacttagtcaaaatggagaaaacctgttaaatt 295  Q
    |||| |||||||||||||||||||||| |||||    
T  16811817 aactcagtcaaaatggagaaaacctgtcaaatt 16811849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 16866157 - 16866253
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| |||||||||||||||| |||| | ||||||||| | |||||| |||||| |||||||||||| | ||| ||||||||    
T  16866157 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgagatcggggaaaac 16866253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 17885453 - 17885549
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| || ||||||||||||| |||| |  |||||||| | ||||||||||||| ||||| |||||||||||| ||||||||    
T  17885453 attttttacatttgggacgggtatgggtatgggttcggggttggaacctatatacccgttacccgtcccatacccatgttttaaaatcggggaaaac 17885549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 18683982 - 18684058
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||||||||||||||  ||| ||||| |||||||  |||||||||||||||||||| |||| ||||| ||||||||    
T  18683982 gtttgggtatgggttcgaggtggatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaac 18684058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 165 - 265
Target Start/End: Original strand, 31425998 - 31426098
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    |||||||||||| |  | ||||||||||| |||| |||| ||||| ||||||| ||||||||||| | ||||||| |||| ||||| |||||||| ||||    
T  31425998 tttctacattcgggtagggtttgggtatgcgttcggggtggatacatatatccccgttacccgtctcatacccgtatttttaaatcggggaaaacccaaa 31426097  T
Q  265 c 265  Q
    |    
T  31426098 c 31426098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 266
Target Start/End: Original strand, 5377073 - 5377176
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||||| |||||| |||   ||||||||||||||| |||| | ||||||||| | | ||||||||||| |||| ||||||| ||||| |||||||| ||    
T  5377073 attttctgcattcgggacagatttgggtatgggttcggggtgggtacctatataccctttacccgtcccatacctgtgttttgaaatcggggaaaaccca 5377172  T
Q  263 aact 266  Q
    ||||    
T  5377173 aact 5377176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 30650619 - 30650718
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||| |||||| | ||||  ||||||||||||||| |||| | ||||||||| | ||||||||||||| |||||||||||| | ||  |||||||||||    
T  30650619 attttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagattggggaaaactca 30650718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 36251088 - 36251009
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttggg 189  Q
    |||||||  |||||||||| ||||| |||||||||||||   ||| ||||||||||||||||||||| |||| |||||||    
T  36251088 gtgaaatggtttagagttttagtttttatttatataaaatatgtaataaattgattttctacattcgggacgggtttggg 36251009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 259
Target Start/End: Original strand, 45380096 - 45380191
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||| |||||| | ||||||||| ||||||||||| |||| | ||||||||| | ||||||||||||| ||||||| |||| ||||| || |||||    
T  45380096 ttttttacatttgggacgagtttaggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgaaatcgggaaaaac 45380191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 45885870 - 45885771
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||| |||||| | ||||  ||| ||||||||||| |||| | ||||||||| || |||||||||||| |||||||||||| | ||| |||||||||||    
T  45885870 attttttacatttgggacggattttggtatgggttcggggtgggtacctatatacttgttacccgtcccatacccgtgttttgagatcggggaaaactca 45885771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 10072477 - 10072550
Alignment:
Q  186 tgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||||||||||| |||| | ||||||||| | |||||||||| || |||||||||||| ||||| ||||||||    
T  10072477 tgggtatgggttcggggtgggtacctatatacccgttacccgttccatacccgtgttttgaaatcggggaaaac 10072550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 12980380 - 12980461
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||| |||||||||||||||| |||| | ||| ||||| | | ||||||||||| |||||||||||| ||||| ||||||||    
T  12980380 gacgggtttgggtatgggttcggggtgggtacttatatacccattacccgtcccatacccgtgttttgaaatcggggaaaac 12980461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 32546182 - 32546267
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatc 250  Q
    |||||||||||| |  | |||||||||||||||| |||| | ||| ||||||| |||||||||| |||||||||| |||| |||||    
T  32546182 tttctacattcgggtagggtttgggtatgggttcggggtgggtacatatatccccgttacccgttccgtacccgtattttgaaatc 32546267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 37103184 - 37103127
Alignment:
Q  211 tatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaactta 268  Q
    |||||||||||||||| |||||||||||| |||| |||||||| ||||| ||||||||    
T  37103184 tatatcctcgttacccttcccgtacccgtattttgaaatcaggaaaaacacaaactta 37103127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 43507433 - 43507538
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||| |||||| | ||||||| | |||||||||||||||| | | ||||||| | ||||||||||| | ||||| |||||| ||||| |||||||| ||    
T  43507433 attttttacatttgggacgagtataggtatgggttcagggtgggtgcctatatacccgttacccgtctcatacccatgttttgaaatcggggaaaaccca 43507532  T
Q  263 aactta 268  Q
     |||||    
T  43507533 tactta 43507538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 18125332 - 18125253
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttt 243  Q
    |||| |||||| | |||| ||||||||||| |||| |||| | ||||||||| | ||||||||||||| |||||||||||    
T  18125332 ttttttacatttgggacgggtttgggtatgcgttcggggtgggtacctatatacccgttacccgtcccatacccgtgttt 18125253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 21702648 - 21702727
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttt 243  Q
    |||| |||||| | |||| ||| |||||||||||| |||| | ||||||||| | ||||||||||||| |||||||||||    
T  21702648 ttttttacatttgggacgggttggggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttt 21702727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 265
Target Start/End: Complemental strand, 2630670 - 2630577
Alignment:
Q  171 cattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    |||||| |||| |||||||||||||||| |||| | || |||||| | ||| ||||||||| ||||| |||||| ||||| |||||||| |||||    
T  2630670 cattcgggacgggtttgggtatgggttcggggtgggtatctatatacccgtcacccgtcccatacccatgtttt-aaatcggggaaaacccaaac 2630577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 3227025 - 3226955
Alignment:
Q  189 gtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||||||| |||| | ||||||||| |  |||||||||||| |||||||||||| ||||| ||||||||    
T  3227025 gtatgggttcggggtgggtacctatattcctgttacccgtcccatacccgtgttttgaaatcggggaaaac 3226955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 258
Target Start/End: Complemental strand, 10990933 - 10990871
Alignment:
Q  196 ttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaa 258  Q
    |||||||| |||||||||||||   ||||||||||||||||||| |||| ||||| |||||||    
T  10990933 ttcagggtggatacctatatccctattacccgtcccgtacccgtattttgaaatcggggaaaa 10990871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 16079016 - 16079106
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaactta 268  Q
    ||||||||||||||| ||||  |||| |  |||||||| | ||||||||||||| |||||||||||| | ||| | |||||| ||||||||    
T  16079016 gacgagtttgggtataggtttggggtgggcacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaacccaaactta 16079106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 266
Target Start/End: Original strand, 27063127 - 27063229
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaa 263  Q
    ||||||||||||| |  | ||||||||||| |||| ||||   ||| ||||||| ||||| |||||| |||||||| |||| |||||  |||||||||||    
T  27063127 ttttctacattcgggtagggtttgggtatgagttcggggtgagtacatatatccccgttatccgtcctgtacccgtattttgaaatcgaggaaaactcaa 27063226  T
Q  264 act 266  Q
    |||    
T  27063227 act 27063229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 266
Target Start/End: Original strand, 37217956 - 37218096
Alignment:
Q  127 ttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttggg-tatgggttcagggtagatacctatatcctc-gttac 224  Q
    ||||||||||||||||| ||||| | || ||| ||||||||||| ||||  |||| ||||||| |||| |||| || | | ||| ||||||| | |||||    
T  37217956 ttgagtttctatttatacaaaagagataataa-ttgattttctatattcaggacgggtttggggtatgagttcgggcttggtacttatatcccccgttac 37218054  T
Q  225 ccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    |||||||||||| ||||||| ||||  |  ||||||||||||    
T  37218055 ccgtcccgtacctgtgttttgaaataggataaaactcaaact 37218096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 266
Target Start/End: Complemental strand, 11472870 - 11472716
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||| ||||  |||||||||||||||||||   || |||||||||||||| |||| | ||||  |||||||||| |||||||  || |||    
T  11472870 gtgaaatgatttagggttttggtttctatttatataaaaggtataataaattgattttct-catttgggacggatttgggtatgagttcaggtgag-tac 11472773  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    |||||| | ||||| || ||   ||||  |||||| ||||| || ||||||||||||    
T  11472772 ctatattcccgttatccatcttatacctctgttttgaaatcgggaaaaactcaaact 11472716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 265
Target Start/End: Original strand, 22973378 - 22973478
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    |||||||||||| |  | ||||||||||||||||  ||| | |||  |||||| | ||||||||||||||||||| |||| |||||  ||||||| ||||    
T  22973378 tttctacattcgagtagggtttgggtatgggttcgaggtgggtacagatatccccattacccgtcccgtacccgtattttgaaatcgtggaaaacccaaa 22973477  T
Q  265 c 265  Q
    |    
T  22973478 c 22973478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 33841123 - 33841167
Alignment:
Q  220 gttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    |||||||||||| |||||||||||| ||||| |||||||||||||    
T  33841123 gttacccgtcccatacccgtgttttgaaatcggggaaaactcaaa 33841167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 39317006 - 39317082
Alignment:
Q  186 tgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    |||||||| ||||||| | ||||| ||||| | || |||||||||| |||||||||||| |||||  ||||||||||    
T  39317006 tgggtatgagttcaggatggatacatatatacccgctacccgtcccatacccgtgttttgaaatcgaggaaaactca 39317082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 265
Target Start/End: Complemental strand, 44845238 - 44845138
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    |||||||||||| |  | ||||| |||||||||| |||| | ||  ||||||||| ||| ||||||||||||||| || | ||||| |||||||| ||||    
T  44845238 tttctacattcgggcagggtttgtgtatgggttcggggtgggtaaatatatcctcattaaccgtcccgtacccgtattatgaaatcggggaaaacccaaa 44845139  T
Q  265 c 265  Q
    |    
T  44845138 c 44845138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 250
Target Start/End: Original strand, 30999964 - 31000050
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatc 250  Q
    |||||||||||| | |||||||||  ||||||||||| ||| | ||| |||||||||||||| ||| | || |||||||||| |||||    
T  30999964 attttctacatttgagacgagtttatgtatgggttcaaggtgggtacatatatcctcgttactcgt-ctgtgcccgtgttttgaaatc 31000050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 38139896 - 38139801
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||| |||||| | |||| |||||| ||||||||| |||| | ||| ||||| ||| ||||||||||| ||| |||||||| ||||  ||||||||    
T  38139896 ttttttacatttgagacgggtttggttatgggttcggggtgggtacttatatactcattacccgtcccatactcgtgttttgaaattggggaaaac 38139801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 42908098 - 42908043
Alignment:
Q  211 tatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    ||||||| | ||||||||||||||||||| |||| ||||| |||||||| ||||||    
T  42908098 tatatccccattacccgtcccgtacccgtattttgaaatcggggaaaacccaaact 42908043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 7780002 - 7780092
Alignment:
Q  169 tacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||| | |||| |||||||||| ||||| |||| | ||||||||| | | ||| ||||||| |||||||||||| | ||| ||||||||    
T  7780002 tacatttgggacgggtttgggtataggttcggggtgggtacctatatacccattatccgtcccatacccgtgttttgagatcggggaaaac 7780092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 259
Target Start/End: Original strand, 27063324 - 27063418
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||||||||| |  | ||| ||||||| |||| |||| | ||| ||||| | ||||||||||||||||||||| || | ||||| ||||||||    
T  27063324 tttctacattcgggtagggttggggtatgagttcggggtgggtacatatattcccgttacccgtcccgtacccgtattattaaatcggggaaaac 27063418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 265
Target Start/End: Complemental strand, 27896580 - 27896478
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||| || ||||| |||| || |||||||| |||| |||| | | | |||| || ||||||||||||| ||||| |||||| |||| ||||||||| ||    
T  27896580 attttttatattcgggacgggtatgggtatgagttcggggttggtgcatataaccccgttacccgtcccatacccatgttttgaaataagggaaaaccca 27896481  T
Q  263 aac 265  Q
    |||    
T  27896480 aac 27896478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 41103670 - 41103740
Alignment:
Q  189 gtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||||||| |||| | ||| ||||| | ||||| ||||||| |||||||||||| ||||| ||||||||    
T  41103670 gtatgggttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcggggaaaac 41103740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 39456089 - 39456024
Alignment:
Q  194 ggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||| | ||||||||| | ||||||||||||| ||||| |||||| ||||| ||||||||    
T  39456089 ggttcggggtgggtacctatatacccgttacccgtcccatacccatgttttgaaatcggggaaaac 39456024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 44794112 - 44794052
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgtttt 244  Q
    |||||||||||||||| |||| | ||||| ||| ||||||||||||| | ||||||||||||    
T  44794112 gtttgggtatgggttcggggtgggtacct-tatactcgttacccgtctcatacccgtgtttt 44794052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 266
Target Start/End: Complemental strand, 10995916 - 10995836
Alignment:
Q  186 tgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    ||||||||||||| |||| | ||  |||| ||  |||||||||||| ||||||||| || ||||| |||||||| ||||||    
T  10995916 tgggtatgggttcggggtgggtatatataaccctgttacccgtcccatacccgtgtcttgaaatcggggaaaacccaaact 10995836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 11472927 - 11472887
Alignment:
Q  64 aagagagaactatgacaagtgaatgtcatctgaaagactga 104  Q
    ||||||||||||||| |||||| |||||||| |||||||||    
T  11472927 aagagagaactatgataagtgagtgtcatctaaaagactga 11472887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 29157357 - 29157413
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgt 239  Q
    ||||||||| ||||| ||||| ||||| ||||||| ||||||||||| | |||||||    
T  29157357 gtttgggtacgggtttagggtggatacatatatccccgttacccgtctcatacccgt 29157413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 37217847 - 37217883
Alignment:
Q  36 aagagaggccgagagtgtgagatattgaaagagagaa 72  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  37217847 aagagaggccgagagtgtgagatatggaaggagagaa 37217883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 38152875 - 38152971
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| |||| ||||||||||| |||| | |||||||||   ||||| |||| || ||||| |||||| ||||| ||||||||    
T  38152875 attttttacatttgggacgggtttaggtatgggttcggggtgggtacctatatagccgttatccgttccatacccatgttttgaaatcggggaaaac 38152971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 9e-34; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 29664789 - 29665041
Alignment:
Q  18 atgactatgatgattgagaagagag--gccgagagtgtgagatattgaaagaga-------gaactatgacaagtgaatgtcatctgaaagactga---- 104  Q
    ||||||||| |||||||||||||||  ||| ||||||| |||||||||||||||       ||| ||||| |||||| |||||||||||| |||||        
T  29664789 atgactatggtgattgagaagagagaggccaagagtgttagatattgaaagagaaaagagagaattatgataagtgagtgtcatctgaaatactgagact 29664888  T
Q  105 -------tgtatgtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggtt 197  Q
           ||||  |||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||| |||| ||||||||||| |||    
T  29664889 ctgacaatgtaaatgaaatgatttagagtttgagtttctatttaaataaaaggggtagtaaattgattttgtacattcgggacgggtttgggtatgagtt 29664988  T
Q  198 cagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatc 250  Q
    |   || | ||||||||||| |||||||| ||  ||||||||||||| |||||    
T  29664989 cgaagtgggtacctatatccccgttacccatcatgtacccgtgttttgaaatc 29665041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 110 - 266
Target Start/End: Original strand, 6810088 - 6810244
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||  ||||| ||||||||| ||||||||| || | |||||||||||||  |||||| || | |||||||||||||||| ||||   |||    
T  6810088 gtgaaatcatttaaggtttgggtttctattgatataaaaggggcaataaattgattttcaccattcgggatgggtttgggtatgggttcggggtgagtac 6810187  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
     |||||||||||||||||| ||||||||||||| ||||||| |||||||| ||||||    
T  6810188 ttatatcctcgttacccgttccgtacccgtgttctaaaatcggggaaaacccaaact 6810244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 111 - 265
Target Start/End: Complemental strand, 27900559 - 27900405
Alignment:
Q  111 tgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacc 210  Q
    |||||| |||||| |||| |||||||||||||||||||| || | |||||||||||| |||||||| | ||  |||||||||||||||  | | | ||||    
T  27900559 tgaaatgatttagggtttcagtttctatttatataaaagaggaaataaattgattttatacattcggggcggatttgggtatgggttcgagatgggtacc 27900460  T
Q  211 tatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    ||||||| | ||||||||||| ||||| |||||| ||||| || |||||||||||    
T  27900459 tatatccacattacccgtcccatacccatgttttgaaatcgggaaaaactcaaac 27900405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 110 - 286
Target Start/End: Original strand, 17153099 - 17153275
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| ||||||  ||||  ||||||||||| || ||| |||| ||||||||||||||||||||| |||| |||||||||||||||  || |   |||    
T  17153099 gtgaaattatttaggttttggatttctatttatctagaaggggtaataaattgattttctacattcgggacgggtttgggtatgggtttgggatgagtac 17153198  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaatggagaaaacc 286  Q
     |||||| | |||| ||||||||||||| |||||||||||| |  |||||||||||| ||| ||||  |||||||||    
T  17153199 atatatcatagttatccgtcccgtacccatgttttaaaatcggaaaaaactcaaactcagttaaaacagagaaaacc 17153275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 40187790 - 40187660
Alignment:
Q  135 ctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgta 234  Q
    ||||||||||||||| |||| |||||| |||||||| ||||| |||||||||||||||| |||  ||||  |||||||||||  ||||||||||| || |    
T  40187790 ctatttatataaaagaggtaataaattaattttctatattcgggacgagtttgggtatgagtt-tgggtgaatacctatatctccgttacccgtctcgca 40187692  T
Q  235 cccgtgttttaaaatcagggaaaactcaaact 266  Q
    |||||||||| ||||  |||||||| ||||||    
T  40187691 cccgtgttttgaaattggggaaaacccaaact 40187660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 113 - 266
Target Start/End: Complemental strand, 16311448 - 16311296
Alignment:
Q  113 aaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagataccta 212  Q
    |||| |||||| ||||| ||||||||||||||||||| | || ||||||||||||| ||||||| |||  |||||  ||||||||| |||| | ||||||    
T  16311448 aaatgatttagggtttg-gtttctatttatataaaagggataataaattgattttcaacattcgagacaggtttgaatatgggttcggggtgggtaccta 16311350  T
Q  213 tatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    |||||  |||| ||||| ||||| |||||||| ||||| |  ||||||||||||    
T  16311349 tatccctgttatccgtctcgtactcgtgttttgaaatcggaaaaaactcaaact 16311296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 136 - 265
Target Start/End: Complemental strand, 32575071 - 32574942
Alignment:
Q  136 tatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtac 235  Q
    |||||||||||||| |||| ||||||||| ||||||||||| | || |||||||| ||||||| || | | ||| |||||||  ||||||| |||||||     
T  32575071 tatttatataaaaggggtaataaattgatattctacattcggggcgggtttgggtttgggttcgggatgggtacatatatccatgttacccatcccgtat 32574972  T
Q  236 ccgtgttttaaaatcagggaaaactcaaac 265  Q
    | ||||||| ||||| |||||||| |||||    
T  32574971 ctgtgttttgaaatcggggaaaacccaaac 32574942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 305
Target Start/End: Complemental strand, 38006582 - 38006433
Alignment:
Q  156 taaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcaggga 255  Q
    |||||| |||||| ||||||| ||||  ||||||||||||||| |||| | |||||||||    ||||| |||||| ||||||| |||| ||||  ||||    
T  38006582 taaattaattttcaacattcgggacggatttgggtatgggttcggggtgggtacctatatatctgttacgcgtcccatacccgtattttgaaattgggga 38006483  T
Q  256 aaactcaaacttagtcaaaatggagaaaacctgttaaattagatttggtt 305  Q
    |||| |||||  ||||||||||||||||||| || ||||  |||||||||    
T  38006482 aaacccaaacccagtcaaaatggagaaaacccgtcaaatcggatttggtt 38006433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 4920809 - 4920905
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| |||||||||||||||| |||| ||||||||||| | ||||||||||||| |||||||||||| | ||| ||||||||    
T  4920809 attttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaac 4920905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 110 - 198
Target Start/End: Original strand, 12457447 - 12457535
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttc 198  Q
    ||||||| ||||||| |||  |||||||||||||| |||| |||| ||||||||||||||||||||| |||| ||||||||||| ||||    
T  12457447 gtgaaatgatttagactttaggtttctatttatattaaaggggtaataaattgattttctacattcgggacgggtttgggtatgagttc 12457535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 113 - 266
Target Start/End: Original strand, 38972855 - 38973008
Alignment:
Q  113 aaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagataccta 212  Q
    |||| |||||| |||| |||||| ||||||||||||| | || |||||||||||| | |||| | || | ||||| |||||||||| |||| | ||||||    
T  38972855 aaatgatttagggtttcagtttcgatttatataaaagggttaataaattgattttatgcatttgagatgggtttgagtatgggttcggggtgggtaccta 38972954  T
Q  213 tatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    ||| | |||||||  |||| ||||| |||||| ||||| || ||||| ||||||    
T  38972955 tattcccgttacctatcccatacccatgttttgaaatcgggaaaaacccaaact 38973008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 138 - 261
Target Start/End: Original strand, 8020573 - 8020696
Alignment:
Q  138 tttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtaccc 237  Q
    |||||||||||| |||||||||||||||||||||||||   ||| ||||| ||||| ||||  | |   |||||||||||  ||||||| | | ||||||    
T  8020573 tttatataaaaggggtagtaaattgattttctacattcagaacgggtttgcgtatgagttcgagatgagtacctatatccctgttacccattcagtaccc 8020672  T
Q  238 gtgttttaaaatcagggaaaactc 261  Q
    ||||||| ||||| ||||||||||    
T  8020673 gtgttttgaaatcggggaaaactc 8020696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 184 - 258
Target Start/End: Complemental strand, 28569106 - 28569032
Alignment:
Q  184 tttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaa 258  Q
    ||||||||||||||| |||| | ||||||||||| ||||||||||||||||||||  |||| ||||| |||||||    
T  28569106 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccgcattttgaaatcggggaaaa 28569032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 7350541 - 7350448
Alignment:
Q  135 ctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgt 228  Q
    ||||||||||||||||| || |||||| |||||||||||| | |||| ||||  |||||||||| |||| ||| ||||||||| | ||||||||    
T  7350541 ctatttatataaaagcgataataaattaattttctacatttgagacgggtttaagtatgggttcggggtggatgcctatatccccattacccgt 7350448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 294
Target Start/End: Complemental strand, 12712661 - 12712532
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    |||||||||||| |  | ||||||||||||||||  ||| | ||| ||||||  ||||| ||||||||||||||| |||| ||||| | |||||| ||||    
T  12712661 tttctacattcgggtagggtttgggtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaacccaaa 12712562  T
Q  265 cttagtcaaaatggagaaaacctgttaaat 294  Q
    || |||||||  || |||||||||| ||||    
T  12712561 ctcagtcaaatcggggaaaacctgtcaaat 12712532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 35194095 - 35194010
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaa 248  Q
    |||||||||||||| |||| ||||| ||||| |||  |||| | ||||||||| | ||||||||||||| ||||||||||||||||    
T  35194095 attttctacattcgggacgggtttgagtatgagtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttaaaa 35194010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 283
Target Start/End: Original strand, 12447365 - 12447484
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaa 263  Q
    ||||||| ||| | |||| |||||||||| ||||| |||| | ||||||||| | | ||||| ||||| |||| |||||||| ||||| ||||||| |||    
T  12447365 ttttctatatttgggacgggtttgggtataggttcggggtgggtacctatatacccattacctgtcccatacctgtgttttacaatcaaggaaaacccaa 12447464  T
Q  264 acttagtcaaaatggagaaa 283  Q
    ||  ||||||||||| ||||    
T  12447465 acccagtcaaaatggggaaa 12447484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 259
Target Start/End: Complemental strand, 20973581 - 20973506
Alignment:
Q  184 tttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||||||||||||| |||| | ||||||||| | |||||||| |||| ||||||||||| |||||| ||||||||    
T  20973581 tttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttgaaaatcggggaaaac 20973506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 176
Target Start/End: Original strand, 35584050 - 35584112
Alignment:
Q  113 aaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcg 176  Q
    |||| |||||| ||||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  35584050 aaatgatttagggtttgagtttctatttatataaaag-ggtaataaattgattttgtacattcg 35584112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 164 - 274
Target Start/End: Original strand, 34259239 - 34259349
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaa 263  Q
    ||||||||||||| |  | |||||| ||| |||||||||| | ||| |||||||||||||||||||| |||||| | |||| |||||  |||||| ||||    
T  34259239 ttttctacattcggggagggtttggatataggttcagggtgggtacatatatcctcgttacccgtccggtacccatattttgaaatcgaggaaaattcaa 34259338  T
Q  264 acttagtcaaa 274  Q
    ||  |||||||    
T  34259339 acccagtcaaa 34259349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 4583102 - 4583198
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| || ||||||||||||  |||| |  |||||||| | ||||||||||||| |||||||||||| ||||| ||||||||    
T  4583102 attttttacatttgggacgggtatgggtatgggtttggggtgggaacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaac 4583198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 15890190 - 15890285
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| || ||||||||||||| |||| | ||||||||| | ||||||||||||| |||||||||||| ||||| | ||||||    
T  15890190 attttttacatttgggacgggtatgggtatgggttc-gggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaac 15890285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 2681219 - 2681302
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    |||||||||||||||| |||| |||||  |||||| | |||||| ||||||||| || |||| ||||| |||||||| ||||||    
T  2681219 gtttgggtatgggttcggggtggatactcatatccccattacccatcccgtacctgtattttgaaatcggggaaaacccaaact 2681302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 10822608 - 10822509
Alignment:
Q  187 gggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaatggagaaaacc 286  Q
    |||||||||||| |||| | ||| |||| || ||||||||||||  |||||||||||| ||||| | |||||| ||||   ||||||||||| |||||||    
T  10822608 gggtatgggttcggggtgggtacatataaccccgttacccgtcctatacccgtgttttgaaatcggagaaaacccaaatccagtcaaaatggggaaaacc 10822509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 336
Target Start/End: Complemental strand, 16366591 - 16366382
Alignment:
Q  126 tttgagtttctatttatataaaagcg-gtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttac 224  Q
    ||||||||||| |||||||||||| | ||| |||| | |||||||||||||| |||||||||||||  |||   |||||  |||| ||||||   |||||    
T  16366591 tttgagtttctttttatataaaagggagtaataaaataattttctacattcgggacgagtttgggttcggg--aagggt--atacatatatctctgttac 16366496  T
Q  225 ccgtcccgtacccgtgttttaaaatcaggga-aaactcaaacttagtcaaaatg-gagaaaacctgttaaattagatttggttcaaccggataccctcat 322  Q
     | |||||||||||| |||| ||||| || | ||||||||||  |||||||| | || ||||| |||||||||   |||||||||   || ||| | |||    
T  16366495 tcatcccgtacccgtattttgaaatcgggaagaaactcaaaccgagtcaaaacgagaaaaaacttgttaaattgagtttggttcagatgggtactcgcat 16366396  T
Q  323 gtatgagttttgtt 336  Q
    ||||||||||||||    
T  16366395 gtatgagttttgtt 16366382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 259
Target Start/End: Complemental strand, 18452022 - 18451895
Alignment:
Q  132 tttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtccc 231  Q
    |||||||| ||||||||| | || ||||||||||||||||| ||| ||||||||||  |||| |||| |||| | ||| ||||||   |||||  ||| |    
T  18452022 tttctattaatataaaagggataataaattgattttctacaatcgggacgagtttgattatgagttcggggtgggtacttatatctgtgttacatgtctc 18451923  T
Q  232 gtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| || |||| ||||| ||||||||    
T  18451922 gtacctgtattttcaaatcggggaaaac 18451895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 23045095 - 23045001
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||||||||| |  | |||| ||||||||||| |||| | ||| ||||||  |||||||| |||||||||||| |||| ||||| ||||||||    
T  23045095 tttctacattcgggtagggttttggtatgggttcggggtgggtacatatatctccgttacccatcccgtacccgtattttgaaatcggggaaaac 23045001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 294
Target Start/End: Complemental strand, 12773925 - 12773796
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    |||||||||||| |  | ||||| ||||||||||  ||| | ||| ||||||  ||||| ||||||||||||||| |||| ||||| | |||||| ||||    
T  12773925 tttctacattcgggtagggtttgagtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaacccaaa 12773826  T
Q  265 cttagtcaaaatggagaaaacctgttaaat 294  Q
    || | |||||  || |||||||||| ||||    
T  12773825 ctcaatcaaatcggggaaaacctgtcaaat 12773796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 12834687 - 12834594
Alignment:
Q  156 taaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaat 249  Q
    |||||| ||||| |||||| | |||| || ||||||||||||| |||||| ||||||||| |  |||||||||||| || || |||||| ||||    
T  12834687 taaattaattttttacatttgggacgggtatgggtatgggttcggggtaggtacctatatacctgttacccgtcccatatccatgttttgaaat 12834594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 30996579 - 30996675
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| |||||||| || |||| |||| | ||||||||| | ||||||| ||||| ||| |||||||||||||| | ||||||    
T  30996579 attttttacatttgggacgggtttgggtgtgtgttcggggtgggtacctatatacccgttacctgtcccatactcgtgttttaaaatcggagaaaac 30996675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 39887259 - 39887199
Alignment:
Q  111 tgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctac 171  Q
    |||||| ||||||| || ||||||||||||||||||||| |  | ||||||||||||||||    
T  39887259 tgaaatgatttagatttcgagtttctatttatataaaagagagaataaattgattttctac 39887199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 5908794 - 5908695
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||| |||||| | |||| |||||||||||||||  ||||   ||| ||||| | ||||||||||||| |||||||||||  | ||| |||||||||||    
T  5908794 attttttacatttgggacgggtttgggtatgggtttggggtgtgtacatatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactca 5908695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 12866657 - 12866558
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||| |||||| | |||| || |||||||||||||  ||| | ||||||||| |  |||||||||||| ||||| |||||| ||||| | |||||||||    
T  12866657 attttttacatttgggacgggtatgggtatgggttcgcggtgggtacctatatacctgttacccgtcccatacccatgttttgaaatcggagaaaactca 12866558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 42987585 - 42987490
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaa 258  Q
    ||||| |||||| | |||| |||||||||||||||| || | | |||||||||   |||||| |||||| |||||||||||| | ||| |||||||    
T  42987585 attttttacatttgggacgggtttgggtatgggttcgggatgggtacctatatatccgttacacgtcccatacccgtgttttgagatcggggaaaa 42987490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 457536 - 457466
Alignment:
Q  105 tgtatgtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattc 175  Q
    |||| ||||||| ||||||  |||  |||||||||||||||||||  ||| |||||||||||| |||||||    
T  457536 tgtaagtgaaatgatttaggattttggtttctatttatataaaaggtgtaataaattgattttatacattc 457466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 340
Target Start/End: Complemental strand, 12866540 - 12866468
Alignment:
Q  268 agtcaaaatggagaaaacctgttaaattagatttggttcaaccggataccctcatgtatgagttttgttgcca 340  Q
    ||||||||||| ||||||| || ||||| ||||||||||   ||| || || |||||||| ||||||||||||    
T  12866540 agtcaaaatggggaaaacccgtcaaattggatttggttcggacgggtaaccacatgtatgggttttgttgcca 12866468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 27088458 - 27088418
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggt 203  Q
    |||||||||||||| |||| |||||||||||||||| ||||    
T  27088458 attttctacattcgagacgggtttgggtatgggttcggggt 27088418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 40187872 - 40187832
Alignment:
Q  64 aagagagaactatgacaagtgaatgtcatctgaaagactga 104  Q
    ||||||||||||||| |||||| |||||||||||||| |||    
T  40187872 aagagagaactatgataagtgagtgtcatctgaaagattga 40187832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 9e-34; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 110 - 247
Target Start/End: Original strand, 25210308 - 25210445
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||| ||||||||||||||||||||||||  ||||  |||||||||||||||||||| || | |||| ||||||||||  |||| | |||    
T  25210308 gtgaaatgatttagggtttgagtttctatttatataaaatgggtaacaaattgattttctacattcgggaggggttttggtatgggtttggggtgggtac 25210407  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaa 247  Q
     ||||||||||||||||||||| |||||||||||||||    
T  25210408 atatatcctcgttacccgtcccatacccgtgttttaaa 25210445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 110 - 265
Target Start/End: Original strand, 13954676 - 13954831
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtat-gggttcagggtagata 208  Q
    ||||||| |||||| ||| ||||||||||||||||||||| |||| ||| |||||||||||| |||| |||| ||||| |||| |||||||  || |  |    
T  13954676 gtgaaatgatttagggttcgagtttctatttatataaaagtggtaataagttgattttctacgttcgagacgggtttgagtatggggttcaatgtgggca 13954775  T
Q  209 cctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    |  ||||||| |||||| |||||||| ||||||||||||||| ||||||| ||||||    
T  13954776 ctaatatccttgttacctgtcccgta-ccgtgttttaaaatcggggaaaattcaaac 13954831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 110 - 265
Target Start/End: Original strand, 14095883 - 14096038
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtat-gggttcagggtagata 208  Q
    ||||||| |||||| ||| ||||||||||||||||||||| |||| ||| |||||||||||| |||| |||| ||||| |||| |||||||  || |  |    
T  14095883 gtgaaatgatttagggttcgagtttctatttatataaaagtggtaataagttgattttctacgttcgagacgggtttgagtatggggttcaatgtgggca 14095982  T
Q  209 cctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    |  ||||||| |||||| |||||||| ||||||||||||||| ||||||| ||||||    
T  14095983 ctaatatccttgttacctgtcccgta-ccgtgttttaaaatcggggaaaattcaaac 14096038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 11958962 - 11959071
Alignment:
Q  126 tttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacc 225  Q
    |||||||||||  ||||||||||| |||| |||||||||||| |||||||  || ||||||||||||| |||| ||| |  ||| |||||||||||||||    
T  11958962 tttgagtttctgcttatataaaagaggtaataaattgattttatacattcatgatgagtttgggtatgagttcggggcatgtacatatatcctcgttacc 11959061  T
Q  226 cgtcccgtac 235  Q
    ||||||||||    
T  11959062 cgtcccgtac 11959071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 165 - 265
Target Start/End: Complemental strand, 38342622 - 38342522
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    |||||||||||| |  | |||||||||||||||| |||| | ||| ||||||| |||||||||||||||| |||| |||||||||| |||||||||||||    
T  38342622 tttctacattcgggtagggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcccgtatccgtattttaaaatcggggaaaactcaaa 38342523  T
Q  265 c 265  Q
    |    
T  38342522 c 38342522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 265
Target Start/End: Complemental strand, 35248539 - 35248388
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||| |||| | |||||||||||||||||| |||| || |||   |||||||||||  |||| |||||||||||||||| |||| | |||    
T  35248539 gtgaaatgatttagggtttcattttctatttatataaaaggggta-tatatt---tttctacattcaggacgggtttgggtatgggttcggggtgggtac 35248444  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    || ||||| | ||||||||||| ||||||||||||  ||||  ||||||| |||||    
T  35248443 ctttatcccctttacccgtcccatacccgtgttttgtaatcgtggaaaacccaaac 35248388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 306
Target Start/End: Original strand, 35965153 - 35965461
Alignment:
Q  18 atgactatgatgattgagaagagag--gccgagagtgtgagatattgaaagaga-------gaactatgacaagtgaatgtcatctgaaagactga---- 104  Q
    |||||||||||||| ||||||||||  | |||||||||||||||| ||| ||||       ||||||||| |||||||||| |||||||| |||||        
T  35965153 atgactatgatgatggagaagagagatgacgagagtgtgagatatggaaggagataaaagagaactatgataagtgaatgttatctgaaaaactgagatc 35965252  T
Q  105 -----tgtatg--tgaaataatttagagtttgagtttctattta-tataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggt 196  Q
         ||||||  |||||| |||||  | || | || ||||||| |||||||| || | ||||||||||||||||||||| |||| ||||||||||||||    
T  35965253 ctcactgtatgagtgaaatgatttatggattcaattcctatttagtataaaaggggcaataaattgattttctacattcgggacgggtttgggtatgggt 35965352  T
Q  197 tcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaatggagaaaacctgttaaatta 296  Q
    || | || | ||| | ||||| | |||| | | || |||||||||||| ||||| ||||||||||||||  | |||||  |||||||||| || ||| ||    
T  35965353 tcggagtgggtacatgtatccccattacacat-ccatacccgtgttttgaaatcggggaaaactcaaacccaatcaaagcggagaaaaccagtcaaaata 35965451  T
Q  297 gatttggttc 306  Q
    | ||||||||    
T  35965452 ggtttggttc 35965461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 110 - 266
Target Start/End: Original strand, 13531880 - 13532035
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||| ||||||||||||||||||||||||  | || ||||||||||||||||||  | | || ||||| || ||||||| ||||  ||||    
T  13531880 gtgaaatgatttagggtttgagtttctatttatataaaatggataataaattgattttctacatgtggggcgggtttgagtgtgggttcggggtgaatac 13531979  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
     |||||||||||||||  ||| ||| || ||||||  ||||| |||||| |||||||    
T  13531980 atatatcctcgttacctatccagtatccatgtttt-gaatcatggaaaattcaaact 13532035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 165 - 265
Target Start/End: Original strand, 43371539 - 43371639
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    |||||||||||| |  | ||||||||||| |||  |||| | ||| ||||||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  43371539 tttctacattcgggtagggtttgggtatgagtttggggtgggtacatatatccccgttacccgtcccgtacccgtattttaaaatcggggaaaactcaaa 43371638  T
Q  265 c 265  Q
    |    
T  43371639 c 43371639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 163
Target Start/End: Complemental strand, 31601040 - 31600873
Alignment:
Q  14 atcaatgactatgatgattgagaagagaggccgagagtgtgagatattgaa-------agagagaactatgacaagtgaatgtcatctgaaagactga-- 104  Q
    ||||||||||||| |||||||||||||||||| | |||||||||||| |||       |||||||||||||| ||||||  ||||| ||||||||| |      
T  31601040 atcaatgactatggtgattgagaagagaggccaatagtgtgagatatggaaggatagaagagagaactatgataagtgagcgtcatatgaaagactaaga 31600941  T
Q  105 -------tgtatg--tgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattga 163  Q
           ||||||  |||||| ||||||||||||||||||||||||||||||||  ||| ||||||||    
T  31600940 ctctaactgtatgagtgaaatgatttagagtttgagtttctatttatataaaaggcgtattaaattga 31600873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 118 - 251
Target Start/End: Original strand, 30696863 - 30696996
Alignment:
Q  118 atttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcc 217  Q
    |||||| |||||| |||||||||||||||||  |||| |||||||||||| |||||| | ||   ||||||||||| |||| |||| | ||| ||||||     
T  30696863 atttagggtttgaatttctatttatataaaatgggtaataaattgattttttacatttgggataggtttgggtatgagttcggggtgggtacatatatct 30696962  T
Q  218 tcgttacccgtcccgtacccgtgttttaaaatca 251  Q
      |||||||||| |||| || |||||||||||||    
T  30696963 ctgttacccgtctcgtatccatgttttaaaatca 30696996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 118 - 240
Target Start/End: Complemental strand, 4961598 - 4961479
Alignment:
Q  118 atttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcc 217  Q
    |||||||| ||| |||||||||   ||||||| |||| |||||| |||||||| ||||| |||||||||||||||||||||  |||   |||||||||||    
T  4961598 atttagagcttgggtttctatt---ataaaagaggtaataaattcattttctatattcgggacgagtttgggtatgggttcgaggtgtgtacctatatcc 4961502  T
Q  218 tcgttacccgtcccgtacccgtg 240  Q
      ||||| |||||| ||||||||    
T  4961501 ctgttacacgtcccatacccgtg 4961479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 265
Target Start/End: Complemental strand, 17845550 - 17845394
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttct-acattcgcgacgagtttgggtatgggttcagggtagata 208  Q
    ||||||| ||||||  || ||||||||||||||||||||  | || |||||||||||| | ||||||| |||| ||||||||||||||| ||||| | ||    
T  17845550 gtgaaatgatttaggtttggagtttctatttatataaaaaggataataaattgatttttttacattcgagacgggtttgggtatgggttaagggtgggta 17845451  T
Q  209 cctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    | |||||   | ||||| ||| | ||| |||||||| |||||   ||||||||||||    
T  17845450 cttatatgtccattaccggtctcatactcgtgttttgaaatcgaagaaaactcaaac 17845394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 9632371 - 9632450
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttt 243  Q
    |||| |||||| | |||| |||||||||||||||| |||| ||||||||||| | | ||||||||||| |||||||||||    
T  9632371 ttttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccattacccgtcccatacccgtgttt 9632450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 18485652 - 18485719
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatc 250  Q
    ||||||||||||||||||||| | ||| ||||||| |||||||||| | |||||||| ||||||||||    
T  18485652 gtttgggtatgggttcagggtgggtacatatatccccgttacccgtactgtacccgtattttaaaatc 18485719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 24414236 - 24414141
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||| |||||| | |||| |||||||||||||||| |||| | ||||||||| |  |||||||||||| |||||||||||| | ||| ||||||||    
T  24414236 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaac 24414141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 40359276 - 40359339
Alignment:
Q  111 tgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacatt 174  Q
    |||||| ||||||| ||||||||||||||||||||||||  ||| |||||||||||| ||||||    
T  40359276 tgaaatgatttagactttgagtttctatttatataaaagatgtaataaattgattttttacatt 40359339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 164 - 306
Target Start/End: Complemental strand, 6027993 - 6027851
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaa 263  Q
    |||||| |||||  |||| || || |||||||||| |||| | ||||||||| |  |||||||||| | ||||| |||||||||||| |||||||| |||    
T  6027993 ttttctgcattcaggacgggtatgagtatgggttcggggtgggtacctatatacctgttacccgtctcatacccatgttttaaaatcggggaaaacccaa 6027894  T
Q  264 acttagtcaaaatggagaaaacctgttaaattagatttggttc 306  Q
    ||  | |||||| || ||||||| || ||||| | ||||||||    
T  6027893 acccaatcaaaacggggaaaacccgtcaaattgggtttggttc 6027851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 111 - 193
Target Start/End: Complemental strand, 34544468 - 34544386
Alignment:
Q  111 tgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatg 193  Q
    |||||| |||||| |||||||||| |||||||||||||  |||| ||||| ||||||||||||||| || | ||||| |||||    
T  34544468 tgaaattatttagggtttgagtttttatttatataaaatgggtaataaatagattttctacattcgggaggggtttgagtatg 34544386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 30846945 - 30847010
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttt 243  Q
    |||| |||||||||||||||| |||| | ||||||||| | ||||||||||||| |||||||||||    
T  30846945 gacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttt 30847010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 7314753 - 7314657
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| || ||||||||||||| |||| |  |||||||| | ||||||||||||| ||| ||| |||||||||| ||||||||    
T  7314753 attttttacatttgggacgggtgtgggtatgggttcggggtgggaacctatatacccgttacccgtcccatactcgtattttaaaatcggggaaaac 7314657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 13705451 - 13705367
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    |||| |||| ||||||||||| |||| | ||||||||| | ||||||| ||| | |||||||||||| ||||| |||||||||||    
T  13705451 gacgggtttaggtatgggttcggggtgggtacctatatacccgttacctgtctcatacccgtgttttgaaatcggggaaaactca 13705367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 37106700 - 37106772
Alignment:
Q  187 gggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||||||||| | || | ||||||||| | ||||||||||||| |||||||||||| ||||| ||||||||    
T  37106700 gggtatgggttcggagtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaac 37106772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 265
Target Start/End: Original strand, 15546751 - 15546830
Alignment:
Q  186 tgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    |||||||||||||||||| | ||  |||| ||  |||||||||||| |||||||||||| ||||| |||||||| |||||    
T  15546751 tgggtatgggttcagggtgggtatatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaac 15546830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 258
Target Start/End: Original strand, 44057868 - 44057962
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcaggg-tagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaa 258  Q
    |||||||||||| |  | |||||||||||||||| ||| | | ||| ||||||| | |||||||||||||||| || |||| |||||||||||||    
T  44057868 tttctacattcgggtagggtttgggtatgggttcgggggtgggtacatatatccccattacccgtcccgtaccggtattttgaaatcagggaaaa 44057962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 3547152 - 3547237
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatc 250  Q
    |||||||||||| |  | |||||| ||||||||| |||| | ||| ||||||  ||||||||||||||||||||| |||| |||||    
T  3547152 tttctacattcgggtagggtttggatatgggttcggggtgggtacatatatctccgttacccgtcccgtacccgtattttgaaatc 3547237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 8916042 - 8915961
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgtttt 244  Q
    ||||| |||||| | |||| ||||| |||||||||| |||| | ||||||||| |  |||||||||||| ||||||||||||    
T  8916042 attttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgtttt 8915961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 10208515 - 10208439
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||||||| |||||| |||||||||   | ||||||||||| |||||||||||||| ||  ||||||||    
T  10208515 gtttgagtatgggttcggggtaggtacctatatatccattacccgtcccatacccgtgttttaagattggggaaaac 10208439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 30978931 - 30979012
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    |||||||||||||||| |||| ||||| ||||||||||||| ||   |||||||||| |||| ||||| || ||||| ||||||    
T  30978931 gtttgggtatgggttcggggtggatacatatatcctcgttatcc--tccgtacccgtattttgaaatcgggaaaaacccaaact 30979012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 37999467 - 37999563
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| ||||||||||| |||| |||| | ||| ||||| | ||||||||||| | |||||||||||| | ||| ||||||||    
T  37999467 attttttacatttgggacgggtttgggtatgagttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttgagatcggggaaaac 37999563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 24051705 - 24051642
Alignment:
Q  187 gggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatc 250  Q
    |||||||||||| |||||| ||| |||||||  |||||||||||| ||| ||| ||||||||||    
T  24051705 gggtatgggttcggggtaggtacatatatccctgttacccgtcccatactcgtattttaaaatc 24051642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 36128210 - 36128131
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttt 243  Q
    |||| |||||| | |||| |||||||||||||||| ||||   ||||||||| | |||||||| |||| |||||||||||    
T  36128210 ttttttacatttgggacgggtttgggtatgggttcggggtgagtacctatatacccgttacccatcccatacccgtgttt 36128131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 45256807 - 45256906
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||| |||||| | |||| |||| ||||||||||| |||| | ||| ||||| | | ||| ||||| | |||||||||||| ||||| |||||||||||    
T  45256807 attttttacatttgggacgggtttaggtatgggttcggggtgggtacttatatacccattaaccgtctcatacccgtgttttgaaatcggggaaaactca 45256906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 259
Target Start/End: Original strand, 14331513 - 14331607
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||||||||| |  | |||||||||||||||| | || | ||| ||||||| ||||||||||||| |||| || |||| ||||  ||||||||    
T  14331513 tttctacattcgggtagggtttgggtatgggttcggagtgggtacatatatccccgttacccgtcccatacctgtatttttaaataggggaaaac 14331607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 35337763 - 35337864
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||||||||| || |||||||||||||| ||||||||||| ||||| | |||| |||| || | ||  ||||   |||||| |||||||| ||||||||    
T  35337763 attttctacatacgagacgagtttgggta-gggttcagggttgatacttgtatcttcgtaactcatcttgtacatatgttttgaaatcaggaaaaactca 35337861  T
Q  263 aac 265  Q
    |||    
T  35337862 aac 35337864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 274
Target Start/End: Original strand, 34320600 - 34320720
Alignment:
Q  156 taaattgattttctacattcgcgacgagtttgggtatgggttcagggtag--atacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagg 253  Q
    |||| |||||||| ||||||| |||| |||||||||||| ||| |||  |  |||| ||||||| |||||  | || | |||| |||||||||||||  |    
T  34320600 taaaatgattttcaacattcgggacgtgtttgggtatggattcggggagggtatacttatatccccgttagtcatctcatacctgtgttttaaaatcgag 34320699  T
Q  254 gaaaactcaaacttagtcaaa 274  Q
    ||||||||||||  |||||||    
T  34320700 gaaaactcaaaccgagtcaaa 34320720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 33175257 - 33175309
Alignment:
Q  207 tacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||||||| | || |||||| |||||||||||||||||||||| | ||||||    
T  33175257 tacctatatacacgctacccgacccgtacccgtgttttaaaatcggagaaaac 33175309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 37309880 - 37309812
Alignment:
Q  119 tttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttg 187  Q
    ||||| |||||| ||||||||||| |||||| | |  |||||||||||||||| |||| |||| |||||    
T  37309880 tttagggtttgaatttctatttatgtaaaagggatgataaattgattttctaccttcgggacgggtttg 37309812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 5e-32; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 110 - 264
Target Start/End: Original strand, 9402519 - 9402672
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||| ||||| ||||||||||||||||| | |||| ||||||||||||||||||||| |||  ||||| |||||||||| |||| || ||    
T  9402519 gtgaaatgatttagggtttgggtttctatttatataaatggggtactaaattgattttctacattcgagacaggtttgagtatgggttc-gggtggacac 9402617  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    ||||||||  ||||||||||| |||||| |||||| ||||| |||||||| ||||    
T  9402618 ctatatccatgttacccgtcctgtacccatgttttgaaatcggggaaaacccaaa 9402672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 116 - 266
Target Start/End: Complemental strand, 256645 - 256494
Alignment:
Q  116 taatttagagtttgagtttctattt-atataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctata 214  Q
    |||||||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||   || | |||||||||||||||  |||| | ||||||||    
T  256645 taatttagagtttgtgtttctattttaaataaaaggggtagtaaattgattttctacatttaggaggggtttgggtatgggtttggggtgggtacctata 256546  T
Q  215 tcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    | | | ||||||||| ||||||| |||||| ||||| |||||||||||||||    
T  256545 tgcccattacccgtctcgtacccatgttttgaaatcggggaaaactcaaact 256494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 104 - 265
Target Start/End: Original strand, 32959785 - 32959945
Alignment:
Q  104 atgtatgtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggt 203  Q
    ||||| || ||||||||||| ||||| ||| ||  |||||||| || |||| |||||||||||||||||||   ||||  ||||| ||||||||| ||||    
T  32959785 atgtaagtaaaataatttagggtttgggttactgcttatataataggggtaataaattgattttctacatttatgacggatttgg-tatgggttcggggt 32959883  T
Q  204 agatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
     ||||||||||||| |||||||||| ||||||||||||||| |||| ||||||||| |||||    
T  32959884 ggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaaac 32959945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 111 - 259
Target Start/End: Original strand, 13769003 - 13769151
Alignment:
Q  111 tgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacc 210  Q
    ||||||||||||  ||||||||||| |||||||||||||  ||| ||||||||||||||||||||  |||| |||||| ||||||||| |||| | ||||    
T  13769003 tgaaataatttatggtttgagtttcaatttatataaaaggagtaataaattgattttctacattcaggacgggtttggatatgggttctgggtgggtacc 13769102  T
Q  211 tatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||   ||||||||||||| ||||| |||||| || || ||||||||    
T  13769103 tatatgtccgttacccgtcccatacccatgttttgaagtcggggaaaac 13769151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 178 - 305
Target Start/End: Complemental strand, 14410945 - 14410819
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaatg 277  Q
    |||| |||||||||||||||| |||| | ||||||||| | ||||||||||||| |||||||||||| ||||| |||||||||||||| ||||||||| |    
T  14410945 gacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatctgggaaaactcaaacctagtcaaaacg 14410846  T
Q  278 gagaaaacctgttaaattagatttggtt 305  Q
    | ||||| | || |||||||||||||||    
T  14410845 g-gaaaatccgtcaaattagatttggtt 14410819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 165 - 258
Target Start/End: Complemental strand, 29199988 - 29199895
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaa 258  Q
    |||||||||||| |  |||||||||||||||||| |||||||||| |||||||  |||||||||||||||||||| |||| ||||| |||||||    
T  29199988 tttctacattcgggtagagtttgggtatgggttcggggtagatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaa 29199895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 274
Target Start/End: Complemental strand, 8320958 - 8320789
Alignment:
Q  105 tgtatgtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggta 204  Q
    |||| ||||||| |||||| |||| ||||||||||||  |||| |  ||| ||| |||||||| | |||||   ||| || ||||||||||||| ||||     
T  8320958 tgtaagtgaaatgatttagggtttaagtttctatttacgtaaatggagtaataagttgattttttgcattcagaacgggtctgggtatgggttcggggtc 8320859  T
Q  205 gatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaa 274  Q
    |||| ||||||||  |||||| || ||||||||||||||| ||||  |||||||| ||||| ||||||||    
T  8320858 gatatctatatccctgttacctgttccgtacccgtgttttgaaattggggaaaacccaaacctagtcaaa 8320789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 258
Target Start/End: Original strand, 20349001 - 20349142
Alignment:
Q  118 atttagagtttgagtttctattt-atataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatc 216  Q
    |||||| |||||||||| ||||| ||||||||   ||| |||||| ||||| |||||| || |||  |||||||||| |||| |||| | ||||||||||    
T  20349001 atttagggtttgagtttatattttatataaaaagtgtaataaattaattttttacatttgcaacggatttgggtatgagttcggggtgggtacctatatc 20349100  T
Q  217 ctcgttacccgtcccgtacccgtgttttaaaatcagggaaaa 258  Q
    | |||||| |||||| |||||||||||| ||||| |||||||    
T  20349101 cccgttactcgtcccatacccgtgttttgaaatcggggaaaa 20349142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 28079780 - 28079699
Alignment:
Q  184 tttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    ||||||||||||||| |||| | ||||||||||| ||||||||||||||||||| |||||| ||||| |||||||| |||||    
T  28079780 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaaac 28079699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 32853827 - 32853923
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| |||||||||||||||| |||| | ||||||||| | ||||||||||||| |||||||||||| | ||| ||||||||    
T  32853827 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaac 32853923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 163 - 266
Target Start/End: Complemental strand, 12678199 - 12678096
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    |||||||  ||||| |||| ||||||||||||||||||||| | ||||||||| | | ||||||||||| |||| |||| || ||||| |||||||| ||    
T  12678199 attttctcaattcgggacgggtttgggtatgggttcagggtgggtacctatataccctttacccgtcccatacctgtgtcttgaaatcggggaaaacgca 12678100  T
Q  263 aact 266  Q
    ||||    
T  12678099 aact 12678096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 295
Target Start/End: Original strand, 14506070 - 14506201
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaa 263  Q
    |||||| |||| | |||| ||||  |||||||||| |||| | |||||| || || |||||||||||| |||| ||||||| ||||| |||||||| |||    
T  14506070 ttttctgcatttgggacgggtttaagtatgggttcggggtgggtacctaaatacttgttacccgtcccatacctgtgttttgaaatcggggaaaacccaa 14506169  T
Q  264 acttagtcaaaatggagaaaacctgttaaatt 295  Q
    ||  ||||||||||| ||||||| || |||||    
T  14506170 acccagtcaaaatggggaaaacccgtcaaatt 14506201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 275
Target Start/End: Complemental strand, 24602961 - 24602849
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    |||||||||||||| || | |||||||||||||||| |||| | || |||||| |  |||||||||| | ||||| |||||| ||||| |||||||| ||    
T  24602961 attttctacattcgtgatgggtttgggtatgggttcggggtgggtatctatatacctgttacccgtcacatacccatgttttgaaatctgggaaaaccca 24602862  T
Q  263 aacttagtcaaaa 275  Q
    |||  ||||||||    
T  24602861 aacccagtcaaaa 24602849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 5863487 - 5863392
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||| |||||| | |||| ||||||||||||||||  ||| | || |||||| | ||||||||||||| |||||||||||| ||||| ||||||||    
T  5863487 ttttttacatttgggacgggtttgggtatgggttcgaggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaac 5863392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 110 - 244
Target Start/End: Complemental strand, 10925601 - 10925467
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||| |||| || |||||||||||||||||   || ||||||  |||| ||||||||  | |||||| ||||||||||| |||| |||||    
T  10925601 gtgaaatgatttagggtttcagattctatttatataaaaggaataataaattatttttttacattcggaatgagtttaggtatgggttcggggtggatac 10925502  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgtttt 244  Q
     ||||||  | |||||| || ||||||| ||||||    
T  10925501 ttatatctccattacccatctcgtacccatgtttt 10925467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 164 - 262
Target Start/End: Original strand, 27534668 - 27534766
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    |||| |||||| | |||| |||||||||||| ||| |||| | ||||||||| | ||||||||||||| |||||||||||  | ||| |||||||||||    
T  27534668 ttttttacatttgggacgggtttgggtatggattcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactca 27534766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 137 - 259
Target Start/End: Complemental strand, 34346136 - 34346014
Alignment:
Q  137 atttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacc 236  Q
    |||||||||||||  ||| |||||| ||||||||||||||  |||  ||||||||| | ||| |||| | ||||||||||| |||||| ||  ||| |||    
T  34346136 atttatataaaaggagtaataaattaattttctacattcggaacggatttgggtatagattcggggtgggtacctatatccccgttactcgctccgaacc 34346037  T
Q  237 cgtgttttaaaatcagggaaaac 259  Q
    ||| |||||||||| || |||||    
T  34346036 cgtattttaaaatcgggaaaaac 34346014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 1947923 - 1947862
Alignment:
Q  136 tatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggtt 197  Q
    |||||||||||||| |||| ||||||||||||||||||| |  ||||||||| |||||||||    
T  1947923 tatttatataaaaggggtaataaattgattttctacatttggaacgagtttgagtatgggtt 1947862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 2367324 - 2367405
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||| |||||||||||||||| |||| | ||| ||||| | ||||||||||||| |||||||||||| | ||| ||||||||    
T  2367324 gacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaac 2367405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 27738755 - 27738851
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| |||||||||||||||| |||| | ||| |||||    |||||||||||| |||||||||||| ||||| ||||||||    
T  27738755 attttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaac 27738851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 32532523 - 32532619
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| || || |||||||||| |||| | ||||||||| | | ||||||||||| |||||||||||| ||||| ||||||||    
T  32532523 attttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcggggaaaac 32532619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 34178390 - 34178338
Alignment:
Q  207 tacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||||| ||||    
T  34178390 tacctatatccttgttacccgtctcgtacccgtgttttgaaatcaggggaaac 34178338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 3484027 - 3483948
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttt 243  Q
    |||| |||||| | |||| |||||||||||||||| |||| | ||||||||| | |||||||| |||| |||||||||||    
T  3484027 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgttt 3483948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 14254956 - 14255042
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    ||||| |||||||||||||||| ||| | |||||||||   |||||| |||||| |||||||| ||| ||||||| ||||||||||||    
T  14254956 gacgaatttgggtatgggttcatggtgggtacctatatttccgttacacgtcccatacccgtg-tttgaaatcagagaaaactcaaac 14255042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 258
Target Start/End: Original strand, 24225681 - 24225776
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaa 258  Q
    ||||| |||||| | |||| ||||||| |||||||| |||| | ||||||||| | ||||||||||||| || ||||||||| | ||| |||||||    
T  24225681 attttttacatttgggacgggtttgggcatgggttcggggtgggtacctatatacccgttacccgtcccatatccgtgttttgagatcggggaaaa 24225776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 34179164 - 34179101
Alignment:
Q  113 aaataatttagagtttgagtttctatttatat-aaaagcggtagtaaattgattttctacattc 175  Q
    |||| |||||| |||||||||||||||||||| ||||| |||| ||||||||||||| ||||||    
T  34179164 aaatgatttagggtttgagtttctatttatataaaaagaggtaataaattgattttcaacattc 34179101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 7393974 - 7393853
Alignment:
Q  181 gagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaatggag 280  Q
    ||||||| |||||||||| |||| ||||||||||| | | ||| ||||| | ||| |||||||| ||||| |||||||  |||||  | ||||||||| |    
T  7393974 gagtttgagtatgggttcggggtggatacctatatacccattatccgtctcttactcgtgttttgaaatcggggaaaatccaaacccaatcaaaatgggg 7393875  T
Q  281 aaaacctgttaaattagatttg 302  Q
    |||| | || ||||| ||||||    
T  7393874 aaaatccgtcaaattggatttg 7393853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 12141368 - 12141449
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgtttt 244  Q
    ||||| |||||| | |||| |||||||||||||||| |||| | ||||||||| | ||| ||||||||| || |||||||||    
T  12141368 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgtcacccgtcccatatccgtgtttt 12141449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 12309555 - 12309648
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaa 256  Q
    ||||| |||||| | |||| |||||||||| ||||| |||| | ||| ||||| |  ||||||||| || |||||||||||| |||||||||||    
T  12309555 attttttacatttgggacgggtttgggtatcggttcggggtgggtacatatatacctgttacccgttccatacccgtgttttgaaatcagggaa 12309648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 14321813 - 14321862
Alignment:
Q  126 tttgagtttctatttatataaaagcggtagtaaattgattttctacattc 175  Q
    |||||||||||||||||||||||  |||| |||||| |||||||||||||    
T  14321813 tttgagtttctatttatataaaataggtaataaattaattttctacattc 14321862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 29341237 - 29341342
Alignment:
Q  161 tgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaact 260  Q
    |||||||||||||||| |||| ||||||||||| |||  || | | ||||||||||  ||||||||||| | | ||| ||||| |||||| || |||||     
T  29341237 tgattttctacattcgggacgggtttgggtatgagtttgggatgggtacctatatctccgttacccgtctcatgcccatgtttgaaaatcgggaaaaacc 29341336  T
Q  261 caaact 266  Q
    ||||||    
T  29341337 caaact 29341342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 200
Target Start/End: Complemental strand, 2126784 - 2126688
Alignment:
Q  105 tgtatgtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttggg-tatgggttcag 200  Q
    |||| ||||||| ||||| || |||||||||||| |||||||||| |||| |||| | ||||||| |||||| || |  |||||| |||||||||||    
T  2126784 tgtaagtgaaatgatttaaagcttgagtttctatctatataaaaggggtaataaacttattttcttcattcgagatggatttgggttatgggttcag 2126688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 11762428 - 11762508
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttt 243  Q
    |||||||||||| | || | ||||||||||| |||| |||| || |||||||| | ||||||||||||| ||||| |||||    
T  11762428 attttctacatttgggatgggtttgggtatgagttcggggtggacacctatatacccgttacccgtcccatacccttgttt 11762508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 18908896 - 18908979
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    ||||||||||| |||  |||| | ||| |||||||| |||||||||||| || |||| |||| ||||| |||||||| ||||||    
T  18908896 gtttgggtatgagtttggggtgggtacatatatccttgttacccgtcccatatccgtattttgaaatcggggaaaacccaaact 18908979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 252926 - 252860
Alignment:
Q  111 tgaaataatttagagtttgagtttctatttatataaaagcggt-agtaaattgattttctacattcg 176  Q
    ||||||||||| || |||||||||||||||| | ||||| ||| |  ||||||||||||||||||||    
T  252926 tgaaataatttcgattttgagtttctatttaaagaaaaggggtaaaaaaattgattttctacattcg 252860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 259
Target Start/End: Original strand, 9458843 - 9458937
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||||||||| |  ||||||||||||  |||| |||| | ||| ||||| | |||||||| |||||||||||| || | ||||| ||||||||    
T  9458843 tttctacattcgggtagagtttgggtataagttcggggtgggtacatatattcccgttacccatcccgtacccgtattattaaatcggggaaaac 9458937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 32053086 - 32053167
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||| |||||||||||||||  |||| | ||| ||||| | ||||||||||||| || || |||||| ||||| ||||||||    
T  32053086 gacgggtttgggtatgggtttggggtgggtacatatatacccgttacccgtcccatatccatgttttgaaatcggggaaaac 32053167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 10142603 - 10142527
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||||||||| |||| |||| | ||||||||| | ||||||| ||||| ||||||| |||| | ||| ||||||||    
T  10142603 gtttgggtatgagttcggggtgggtacctatatacccgttacctgtcccatacccgttttttgagatcggggaaaac 10142527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 275
Target Start/End: Original strand, 14034529 - 14034597
Alignment:
Q  207 tacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaa 275  Q
    ||||||||| | ||||||||||| | |||  |||| |||||||| ||||||||||||||  ||||||||    
T  14034529 tacctatatacccgttacccgtctcatacttgtgtcttaaaatcggggaaaactcaaacccagtcaaaa 14034597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 1e-29; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 110 - 268
Target Start/End: Complemental strand, 8545507 - 8545349
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||| |||||  ||||| ||||||||||||  || |||||||||||||||||||| | |||||||||| |||||||||| |||| | ||     
T  8545507 gtgaaatgatttagggtttggatttctgtttatataaaaggagttgtaaattgattttctacatttgggacgagtttgagtatgggttcggggtgggtat 8545408  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaactta 268  Q
    |||||||| |||||| ||| || |||||||||||| ||||| | |||||| ||||||||    
T  8545407 ctatatccccgttactcgttccatacccgtgttttgaaatcggagaaaacccaaactta 8545349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 110 - 244
Target Start/End: Original strand, 28345421 - 28345555
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| ||||||| |||  ||||||||||||||||||| |||| || ||| |||||||||||||  ||| ||||||||||||||||| |||| | | |    
T  28345421 gtgaaatgatttagaatttcggtttctatttatataaaaggggtaatatatttattttctacattcaggacaagtttgggtatgggttcggggtgggtgc 28345520  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgtttt 244  Q
    ||||||||||||||||| ||| |||||||||||||    
T  28345521 ctatatcctcgttacccatcctgtacccgtgtttt 28345555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 266
Target Start/End: Original strand, 29918537 - 29918693
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||| ||||||||||||||||||||||||| |||| |||||||||||| |||||| | |||| ||||| |||||| ||| |||| | |||    
T  29918537 gtgaaatgatttagggtttgagtttctatttatataaaagaggtaataaattgattttttacatttgggacgggtttgtgtatggtttcggggtgggtac 29918636  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
     |||||| | ||||||||| | ||||  ||||||| ||||| || ||||||||||||    
T  29918637 atatatctttgttacccgttctgtacatgtgttttgaaatcgggaaaaactcaaact 29918693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 110 - 306
Target Start/End: Original strand, 5700286 - 5700482
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||||||||  ||||| ||||||||||||| ||||  ||||| ||||| |||||||| || |  |||||||||||||||  ||| | ||     
T  5700286 gtgaaatgatttagagtttcggtttcaatttatataaaaggggtaaaaaattaattttatacattcgggatggatttgggtatgggttcgaggtgggtat 5700385  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaatggagaaaacctgttaaattagatttggttc 306  Q
    |||||||| ||||||| ||| | |||| ||||||| ||||| || |||||| ||||  |||||||| ||| |||||| || ||| ||| ||||||||    
T  5700386 ctatatccccgttaccagtctcatacctgtgttttgaaatcgggaaaaacttaaacccagtcaaaacggaaaaaacccgtcaaaataggtttggttc 5700482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 153 - 266
Target Start/End: Complemental strand, 30481536 - 30481423
Alignment:
Q  153 tagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcag 252  Q
    ||||||||| ||||| |||||||| ||||||||||||||||||||| |||| | ||||||||||||| |||| |||| | ||| ||| |||| |||||||    
T  30481536 tagtaaattaattttttacattcgggacgagtttgggtatgggttcggggtgggtacctatatcctcattactcgtctcatactcgtattttgaaatcag 30481437  T
Q  253 ggaaaactcaaact 266  Q
    | ||||| ||||||    
T  30481436 gaaaaacccaaact 30481423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 110 - 250
Target Start/End: Complemental strand, 9476171 - 9476031
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||||||||||||||| | |||||||||||||| ||| |||| ||| || |||||||||||||| || | ||||||||||||||||  ||| | ||     
T  9476171 gtgaaataatttagagtttcaatttctatttatatataaggggtaataatttaattttctacattcgggatgggtttgggtatgggttcgaggtgggtat 9476072  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatc 250  Q
     ||||||| ||||||  |||||||| |||| |||| |||||    
T  9476071 ttatatccccgttacttgtcccgtatccgttttttgaaatc 9476031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 156 - 286
Target Start/End: Original strand, 14186296 - 14186426
Alignment:
Q  156 taaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcaggga 255  Q
    |||||| |||||||||||||  |||| |||||||||||||||||||||   |||||||||   |||||||| |||| |||||||||||| |||||  | |    
T  14186296 taaattaattttctacattcaggacgggtttgggtatgggttcagggtgagtacctatatatccgttacccatcccatacccgtgttttgaaatcgagaa 14186395  T
Q  256 aaactcaaacttagtcaaaatggagaaaacc 286  Q
    ||||||||||  | |||||| ||||||||||    
T  14186396 aaactcaaacccaatcaaaacggagaaaacc 14186426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 178 - 306
Target Start/End: Original strand, 17469253 - 17469381
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaaatg 277  Q
    |||| |||||||||||||||  |||| | ||||||||| | ||||||||||||| |||||||||||| ||||| |||||||| |||||  |||||||| |    
T  17469253 gacgggtttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccagtcaaaacg 17469352  T
Q  278 gagaaaacctgttaaattagatttggttc 306  Q
    | ||||| | || ||||| | ||||||||    
T  17469353 gggaaaatccgtcaaattgggtttggttc 17469381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 156 - 262
Target Start/End: Original strand, 45236041 - 45236147
Alignment:
Q  156 taaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcaggga 255  Q
    |||||| ||||| |||||| | |||| || ||| ||||||||| |||| | ||||||||| | | ||||||||||| |||||||||||| ||||||||||    
T  45236041 taaattaattttttacatttgggacgggtatggatatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcaggga 45236140  T
Q  256 aaactca 262  Q
    |||||||    
T  45236141 aaactca 45236147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 264
Target Start/End: Original strand, 14687378 - 14687483
Alignment:
Q  159 attgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaa 258  Q
    |||||||||| ||||||  ||||||||||||||||||||| |||| ||||| |||||||  ||| | |||||| |||| ||||||| ||||| |||||||    
T  14687378 attgattttccacattcaggacgagtttgggtatgggttcggggtggatacatatatccctgtttctcgtcccatacctgtgttttgaaatcggggaaaa 14687477  T
Q  259 ctcaaa 264  Q
    | ||||    
T  14687478 cccaaa 14687483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 114 - 264
Target Start/End: Complemental strand, 17084263 - 17084111
Alignment:
Q  114 aataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttct--acattcgcgacgagtttgggtatgggttcagggtagatacct 211  Q
    |||||||||| | ||| |||| |||||||||||||  |  | |||||||||||| |  ||||||| || | |||||| |||| |||| |||| | || ||    
T  17084263 aataatttagggcttgggtttatatttatataaaaaggacaataaattgattttttttacattcgtgatgggtttggatatgagttcggggtgggtatct 17084164  T
Q  212 atatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    |||||| ||||||||||| |||||||||||||||||||| | |||||| ||||    
T  17084163 atatccccgttacccgtctcgtacccgtgttttaaaatcggagaaaacccaaa 17084111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 250
Target Start/End: Original strand, 30903976 - 30904116
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||  ||||  ||||||||||||||||||   ||| ||||||||||||||||||||| |||   |||||||||||||   |||| | |||    
T  30903976 gtgaaatgatttaaggttttggtttctatttatataaaatgtgtaataaattgattttctacattcgggactgatttgggtatgggtatggggtgggtac 30904075  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatc 250  Q
     ||||||  | ||||||||| |||||||||||||| |||||    
T  30904076 ttatatctccattacccgtctcgtacccgtgttttgaaatc 30904116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 39379691 - 39379604
Alignment:
Q  156 taaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgtttt 244  Q
    ||||||||||| ||||||||| |||||||||| ||||| |||| |||| | ||| | ||||||| ||||||||||||||||||||||||    
T  39379691 taaattgatttactacattcgggacgagtttgagtatgagttc-gggtgggtacttttatcctcattacccgtcccgtacccgtgtttt 39379604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 24870129 - 24870030
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    ||||| |||||| | |||| |||| |||||||| || |||| | ||||||||| | ||||||||||| | |||||||||||||||||| |||||||||||    
T  24870129 attttttacatttgggacgggtttaggtatgggctcggggtgggtacctatatacccgttacccgtcacatacccgtgttttaaaatcggggaaaactca 24870030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 110 - 264
Target Start/End: Complemental strand, 12468376 - 12468223
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||||||||||  |||| |||||| |||||||||||  |||| ||| |||||||||||||||||  |||| |||| ||||| |||| |||| | |||    
T  12468376 gtgaaataatttaggatttgcgtttctctttatataaaaagggtaataagttgattttctacattcggaacgaatttgagtatgagttcggggttggtac 12468277  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    ||| |||| | ||||  ||| |||||||||||||  |||||  ||||||| ||||    
T  12468276 ctacatcc-cattacatgtctcgtacccgtgtttcgaaatcgaggaaaacccaaa 12468223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 265
Target Start/End: Complemental strand, 6388663 - 6388519
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||| ||||| |||||| |||||||||||  |||| ||||||||||||||||||||  || | ||||| | |||||           |||    
T  6388663 gtgaaatgatttagggtttgggtttctgtttatataaaatgggtaataaattgattttctacattcaggatgggtttgagcatggg-----------tac 6388575  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    |||||||| |||||||||||  ||||||||||||||||||| ||||| || |||||    
T  6388574 ctatatccccgttacccgtcttgtacccgtgttttaaaatcggggaagacccaaac 6388519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 10297461 - 10297542
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    |||| |||||||||||||||||| ||| ||||||| ||||||| ||||||| ||||| |||| ||||| |||||||| ||||    
T  10297461 gttttggtatgggttcagggtaggtacatatatccccgttacctgtcccgtccccgtattttgaaatcggggaaaacccaaa 10297542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 203
Target Start/End: Original strand, 36274973 - 36275065
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggt 203  Q
    ||||||| |||||| ||| | ||||||||||||||||||| | ||||||||||||||| |||||||| |||  |||| ||||||||||| ||||    
T  36274973 gtgaaatgatttagggttgg-gtttctatttatataaaagggatagtaaattgattttttacattcgggacatgtttaggtatgggttcggggt 36275065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 274
Target Start/End: Complemental strand, 9642489 - 9642345
Alignment:
Q  131 gtttctatttatataaaa-gcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtc 229  Q
    |||||||||||||||||| | ||||  ||| | ||||| |||||| | |||| || || |||||||||| || | ||||  |||| || |||||||||||    
T  9642489 gtttctatttatataaaaaggggtaaaaaaataattttttacatttgggacgggtatgagtatgggttcgggatggatatatataaccccgttacccgtc 9642390  T
Q  230 ccgtacccgtgttttaaaatcagggaaaactcaaacttagtcaaa 274  Q
    || |||||||||||| ||||| |||||||| |||||  |||||||    
T  9642389 ccatacccgtgttttgaaatcggggaaaacccaaacccagtcaaa 9642345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 266
Target Start/End: Original strand, 1012610 - 1012704
Alignment:
Q  171 cattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    |||||| ||||||||||||||||||||| |||| | ||||||||| | | ||||||||||| ||| | |||||| ||||| |||||||| ||||||    
T  1012610 cattcgggacgagtttgggtatgggttcggggtgggtacctatatacccattacccgtcccatactcatgtttt-aaatcggggaaaacccaaact 1012704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 266
Target Start/End: Original strand, 14155491 - 14155618
Alignment:
Q  139 ttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccg 238  Q
    ||||||||||| |||| |||||||||||||||||||   || | |||||||||||  ||  |||| ||||  |||||||||||||||| ||   ||||||    
T  14155491 ttatataaaaggggtaataaattgattttctacatttaggatgggtttgggtatgaatttggggtggataaatatatcctcgttacccatcttatacccg 14155590  T
Q  239 tgttttaaaatcagggaaaactcaaact 266  Q
    |||||| ||||| || ||||| ||||||    
T  14155591 tgttttgaaatcgggaaaaacccaaact 14155618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 259
Target Start/End: Original strand, 24927933 - 24928028
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||| |||||| | |||| |||||||||||||||| |||| | ||||||||| | ||||||||||| | |||||||||||  | ||||||||||||    
T  24927933 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagatcagggaaaac 24928028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 32303045 - 32303124
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttt 243  Q
    |||| |||||| | |||| |||||||||||||||| |||| | ||||||||| | ||||||||||||| |||||||||||    
T  32303045 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttt 32303124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 15068690 - 15068597
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||||||||| |  | ||| |||||||||||| |||| ||||| ||||||| ||||||| ||||||||||||| |||| ||||| ||||||||    
T  15068690 tttctacattcgggtagggttcgggtatgggttcggggtggatacatatatcc-cgttacctgtcccgtacccgtattttgaaatcggggaaaac 15068597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 17108306 - 17108388
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtat 192  Q
    ||||||| |||||| |||| |||||||||||||||||||  | || |||||||||||| |||| ||| || ||||||||||||    
T  17108306 gtgaaattatttagggtttaagtttctatttatataaaatggataataaattgattttttacaatcgggatgagtttgggtat 17108388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 171 - 265
Target Start/End: Original strand, 20399583 - 20399677
Alignment:
Q  171 cattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    |||||| |||| ||||||| |||||||| |||| | || |||||| | ||||||||||||| |||||||||||| ||||| | |||||| |||||    
T  20399583 cattcgggacgggtttgggaatgggttcggggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaacccaaac 20399677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 265
Target Start/End: Complemental strand, 27777354 - 27777201
Alignment:
Q  113 aaataatttagagtttgagtttctatttatataaaa-gcggtagtaaattgattttctacat-tcgcgacgagtttgggtatgggttcagggtagatacc 210  Q
    |||| |||||||||||   |||||||||||| |||| | |||| |||||||||||| || || | | | ||||||||||||||||||| |||| | ||||    
T  27777354 aaatgatttagagtttagatttctatttatacaaaaaggggtaataaattgattttatatatgtagag-cgagtttgggtatgggttcggggtgggtacc 27777256  T
Q  211 tatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    | ||||   |||||| |||||||||| ||||||| ||||| || |||||||||||    
T  27777255 tgtatctctgttacctgtcccgtacctgtgttttgaaatcgggaaaaactcaaac 27777201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 29108927 - 29108831
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| || ||||||||||||| |||| | ||| ||||| | ||||||||||||| ||||| |||||||||||| || |||||    
T  29108927 attttttacatttgggacgggtatgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccatgttttaaaatcgggaaaaac 29108831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 193
Target Start/End: Original strand, 5793515 - 5793598
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatg 193  Q
    ||||||| |||||| ||||||||||||||||||||||||  | || | |||||||||| ||||||   |||||||||| |||||    
T  5793515 gtgaaatgatttagggtttgagtttctatttatataaaaatgataattaattgattttttacatttaggacgagtttgagtatg 5793598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 27932422 - 27932492
Alignment:
Q  189 gtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||||||| |||| | ||||||||| | |||||| |||||| |||||||||||| ||||| ||||||||    
T  27932422 gtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaaatcggggaaaac 27932492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 37961052 - 37960964
Alignment:
Q  178 gacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaact 266  Q
    |||| ||||||||||| |||| ||||   ||||||||| |  |||||| ||||| |||||||||||| ||||| |||||||| ||||||    
T  37961052 gacgggtttgggtatgagttcggggtgtgtacctatatacctgttacctgtcccatacccgtgtttttaaatcggggaaaacccaaact 37960964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 43113730 - 43113635
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    |||||| |||||| ||||  |||||||||| |||| |||| | ||||||||| |  |||||||||||| | |||||||||| ||||| || |||||    
T  43113730 ttttctgcattcgagacggatttgggtatgagttcggggtgggtacctatatacctgttacccgtcccatgcccgtgttttgaaatcgggaaaaac 43113635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 24189533 - 24189579
Alignment:
Q  205 gatacctatatcctcgttacccgtcccgtacccgtgttttaaaatca 251  Q
    ||||| ||||||||| ||| ||||| |||||||||||||||||||||    
T  24189533 gatacatatatcctcattatccgtctcgtacccgtgttttaaaatca 24189579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 35747345 - 35747265
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtat 192  Q
    ||||||| |||||| |||||||||||||||||||| |||| |||| || |||||||||| ||||||  || | ||||||||||    
T  35747345 gtgaaatgatttag-gtttgagtttctatttatat-aaaggggtaatagattgattttcaacattcatgatgggtttgggtat 35747265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 35215563 - 35215619
Alignment:
Q  207 tacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    ||||||||| ||||||||||||| | |||||||||||| ||||| |||||||| ||||    
T  35215563 tacctatatactcgttacccgtctcatacccgtgttttgaaatc-gggaaaacccaaa 35215619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 306
Target Start/End: Complemental strand, 36132020 - 36131879
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    ||||| |||||| ||||  |||| ||||| |||| |||| ||||||| ||| | | |||||| |||| ||| |||||||| ||||  |||||||||||||    
T  36132020 tttctgcattcgggacggatttgtgtatgagttcggggtggatacctgtatgccctttacccatcccatactcgtgttttgaaataggggaaaactcaaa 36131921  T
Q  265 cttagtcaaaatggagaaaacctgttaaattagatttggttc 306  Q
    |  | |||||| ||| |||| |  | ||||||| ||||||||    
T  36131920 cccaatcaaaacggaaaaaatccatcaaattaggtttggttc 36131879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 40248453 - 40248380
Alignment:
Q  186 tgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||||||||||| || | | ||||||||| | ||||| ||||| | |||||||||||| ||||| ||||||||    
T  40248453 tgggtatgggttcgggatgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcggggaaaac 40248380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 15173927 - 15173883
Alignment:
Q  221 ttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaac 265  Q
    ||||||||||||||||||| |||| ||||| || |||||||||||    
T  15173927 ttacccgtcccgtacccgtattttgaaatcgggaaaaactcaaac 15173883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 28345364 - 28345404
Alignment:
Q  64 aagagagaactatgacaagtgaatgtcatctgaaagactga 104  Q
    ||||||||||||||| |||||| |||||||||||| |||||    
T  28345364 aagagagaactatgataagtgagtgtcatctgaaatactga 28345404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 39445681 - 39445585
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||| |||||| | |||| || |||||||| |||| |||| | ||||||||  | ||||||| ||||| |||||||||||| ||||| || |||||    
T  39445681 attttttacatttgggacgggtatgggtatgagttcggggtgggtacctataaacccgttacctgtcccatacccgtgttttgaaatcgggaaaaac 39445585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 164 - 265
Target Start/End: Original strand, 33377 - 33478
Alignment:
Q  164 ttttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaa 263  Q
    |||||| |||||| ||||||||||||||||||||| |||| | ||| ||||| | ||||||||||||| |||||||||||| ||||| |||||||| |||    
T  33377 ttttctgcattcgggacgagtttgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaa 33476  T
Q  264 ac 265  Q
    ||    
T  33477 ac 33478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 70098 - 70173
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaa 258  Q
    |||||||||||||||  |||| | ||| ||||||||||||||||||||||||||||| || | |||||||| ||||    
T  70098 gtttgggtatgggtttggggtgggtacatatatcctcgttacccgtcccgtacccgtattatgaaatcaggaaaaa 70173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 228
Target Start/End: Original strand, 14789 - 14906
Alignment:
Q  111 tgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatacc 210  Q
    |||||| |||||  |||| |||||||||||||||||||| || | ||||||||| || ||| |||  |||| ||||||||||| ||||||||| | |||     
T  14789 tgaaatgatttaatgtttaagtttctatttatataaaaggggaaataaattgatgttttaccttcaggacgggtttgggtatgagttcagggtgggtact 14888  T
Q  211 tatatcctcgttacccgt 228  Q
     |||||| | ||||||||    
T  14889 aatatccccattacccgt 14906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 250
Target Start/End: Complemental strand, 17613 - 17473
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcagggtagatac 209  Q
    ||||||| |||||  ||||| ||||||||||||||||||  |||| ||||| | |||| ||||||||  ||  |||||| || |||||  || | |||||    
T  17613 gtgaaatgatttatggtttgcgtttctatttatataaaatgggtaataaatgggttttatacattcggtacatgtttggataagggtttgggatggatac 17514  T
Q  210 ctatatcctcgttacccgtcccgtacccgtgttttaaaatc 250  Q
    |||||||| |||||||| ||| ||| || |||||| |||||    
T  17513 ctatatccccgttacccttcctgtatccatgttttgaaatc 17473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 265
Target Start/End: Original strand, 211349 - 211449
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    |||||||||||  |  |||||||||||||||||| |||| | ||| |||||||  |||||||||| ||||||||| |||| ||||| | |||||| ||||    
T  211349 tttctacattcaggtagagtttgggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaa 211448  T
Q  265 c 265  Q
    |    
T  211449 c 211449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1322 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1322
Description:

Target: scaffold1322; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 1057 - 1120
Alignment:
Q  126 tttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttggg 189  Q
    |||||||||||||||||||||||  |||| |||||| |||||||||||||  |||| |||||||    
T  1057 tttgagtttctatttatataaaatgggtaataaattaattttctacattcatgacgggtttggg 1120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 4738 - 4673
Alignment:
Q  110 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattc 175  Q
    ||||||| |||||||||||   |||||||||||||||||| |||  ||| ||||||||||||||||    
T  4738 gtgaaatgatttagagttttgatttctatttatataaaaggggttataatttgattttctacattc 4673  T

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Target: scaffold0184 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 266
Target Start/End: Original strand, 2954 - 3055
Alignment:
Q  165 tttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactcaaa 264  Q
    |||||||||||| |  | ||||| |||||||||| |||| | ||| |||||||  |||| |||||| |||||||| |||| ||||| |||||||| ||||    
T  2954 tttctacattcgggtagggtttgagtatgggttcggggtgggtacatatatcccagttatccgtcctgtacccgtattttgaaatcggggaaaacccaaa 3053  T
Q  265 ct 266  Q
    ||    
T  3054 ct 3055  T

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Target: scaffold0013 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 105554 - 105498
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgt 239  Q
    |||||||||||||||| |||| | ||| |||||||  ||||||||||||||||||||    
T  105554 gtttgggtatgggttcggggtgggtacatatatccctgttacccgtcccgtacccgt 105498  T

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Target: scaffold0013; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 128206 - 128150
Alignment:
Q  183 gtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgt 239  Q
    |||||||||||||||| |||| | ||| ||||||| | |||||||||||||||||||    
T  128206 gtttgggtatgggttcggggtgggtacatatatccccattacccgtcccgtacccgt 128150  T

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Target: scaffold0294 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 266
Target Start/End: Original strand, 14758 - 14861
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaactca 262  Q
    |||||||||||| | |||||||||||||||| ||||| ||| | ||||||||| | | ||| ||||||| | |  ||||||| ||||| | |||||| ||    
T  14758 attttctacatttgggacgagtttgggtatgtgttcaaggtgggtacctatatacccattatccgtcccatgcatgtgttttgaaatcggagaaaaccca 14857  T
Q  263 aact 266  Q
    ||||    
T  14858 aact 14861  T

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Target: scaffold0135 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 36137 - 36221
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaa 247  Q
    ||||||| |||||| |||| |||||| |||| |||  || | ||||||||||| ||||||| ||||||  |||||||||| ||||    
T  36137 attttctgcattcgggacgggtttggttatgagtttgggatggatacctatatactcgttatccgtcctatacccgtgttataaa 36221  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 90580 - 90676
Alignment:
Q  163 attttctacattcgcgacgagtttgggtatgggttcagggtagatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcagggaaaac 259  Q
    ||||||| |||||  ||||| |||| |||||||||| |||  | |||| |||| | ||||| ||||| | |||||||||||| ||||| ||||||||    
T  90580 attttctgcattcaggacgaatttgtgtatgggttcggggagggtaccaatatacccgttaaccgtctcatacccgtgttttgaaatcggggaaaac 90676  T

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