View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13061_high_48 (Length: 353)

Name: NF13061_high_48
Description: NF13061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13061_high_48
NF13061_high_48
[»] chr6 (68 HSPs)
chr6 (63-336)||(26057378-26057651)
chr6 (63-336)||(26077348-26077621)
chr6 (63-336)||(26144324-26144597)
chr6 (63-336)||(25512347-25512620)
chr6 (63-336)||(25484515-25484788)
chr6 (63-336)||(25581178-25581451)
chr6 (63-244)||(25546531-25546712)
chr6 (150-336)||(27529844-27530030)
chr6 (75-335)||(27215909-27216169)
chr6 (187-335)||(31286016-31286164)
chr6 (187-333)||(27609694-27609843)
chr6 (187-336)||(27426189-27426338)
chr6 (187-335)||(27717073-27717224)
chr6 (187-332)||(27697163-27697308)
chr6 (125-236)||(28787812-28787923)
chr6 (125-236)||(28793933-28794044)
chr6 (86-236)||(25491780-25491930)
chr6 (1-66)||(398597-398662)
chr6 (126-242)||(26637193-26637309)
chr6 (126-242)||(26743159-26743275)
chr6 (81-324)||(26863048-26863285)
chr6 (125-241)||(26624816-26624932)
chr6 (125-241)||(26730793-26730909)
chr6 (157-236)||(27680521-27680600)
chr6 (270-335)||(26885524-26885589)
chr6 (125-242)||(27591527-27591644)
chr6 (138-242)||(25075432-25075536)
chr6 (152-243)||(2186369-2186460)
chr6 (187-242)||(26850277-26850332)
chr6 (126-244)||(26885633-26885751)
chr6 (135-229)||(27603217-27603311)
chr6 (125-242)||(27676126-27676243)
chr6 (187-244)||(27704837-27704894)
chr6 (1-66)||(34948880-34948945)
chr6 (81-324)||(26647947-26648184)
chr6 (81-324)||(26753915-26754152)
chr6 (187-235)||(26804018-26804066)
chr6 (266-333)||(26657421-26657488)
chr6 (266-333)||(26763392-26763459)
chr6 (268-335)||(26803903-26803970)
chr6 (126-243)||(26951295-26951412)
chr6 (270-335)||(28787695-28787760)
chr6 (270-335)||(28793816-28793881)
chr6 (4-45)||(28996731-28996772)
chr6 (275-335)||(27603369-27603429)
chr6 (151-243)||(29827541-29827633)
chr6 (267-333)||(26938488-26938554)
chr6 (5-66)||(13837801-13837862)
chr6 (267-332)||(26624731-26624796)
chr6 (187-236)||(26657533-26657582)
chr6 (267-332)||(26730708-26730773)
chr6 (187-236)||(26763504-26763553)
chr6 (266-335)||(26825276-26825345)
chr6 (187-244)||(26825376-26825433)
chr6 (126-243)||(26960677-26960794)
chr6 (187-244)||(28141089-28141146)
chr6 (1-45)||(18339107-18339151)
chr6 (152-236)||(26978939-26979023)
chr6 (109-236)||(26938582-26938709)
chr6 (187-236)||(28150734-28150783)
chr6 (187-243)||(28097023-28097079)
chr6 (10-45)||(13647018-13647053)
chr6 (187-242)||(26813102-26813157)
chr6 (187-236)||(27663777-27663826)
chr6 (270-327)||(27680415-27680472)
chr6 (151-243)||(28186955-28187047)
chr6 (187-235)||(29842563-29842611)
chr6 (1-45)||(31028486-31028530)
[»] chr1 (11 HSPs)
chr1 (125-335)||(266861-267065)
chr1 (102-236)||(26137441-26137575)
chr1 (1-66)||(26144235-26144300)
chr1 (135-335)||(28126206-28126400)
chr1 (1-66)||(7433425-7433490)
chr1 (266-335)||(28132157-28132226)
chr1 (1-59)||(32982178-32982236)
chr1 (1-63)||(41972397-41972458)
chr1 (1-63)||(42311063-42311125)
chr1 (1-45)||(35907553-35907597)
chr1 (284-335)||(26137345-26137396)
[»] scaffold0003 (1 HSPs)
scaffold0003 (187-336)||(61025-61174)
[»] chr4 (30 HSPs)
chr4 (187-336)||(18075217-18075366)
chr4 (1-67)||(13012167-13012233)
chr4 (1-66)||(20129290-20129355)
chr4 (1-66)||(47500753-47500818)
chr4 (1-66)||(26439401-26439466)
chr4 (1-66)||(34407406-34407471)
chr4 (1-66)||(25930688-25930753)
chr4 (1-62)||(36382467-36382528)
chr4 (1-66)||(43355884-43355949)
chr4 (1-45)||(30216864-30216908)
chr4 (1-45)||(50205199-50205243)
chr4 (135-242)||(18678084-18678191)
chr4 (1-44)||(43143706-43143749)
chr4 (142-244)||(18730029-18730131)
chr4 (4-45)||(6690360-6690401)
chr4 (1-66)||(29319827-29319892)
chr4 (4-43)||(3293021-3293060)
chr4 (135-242)||(18654004-18654111)
chr4 (2-72)||(6235506-6235576)
chr4 (5-67)||(7769307-7769369)
chr4 (181-242)||(18697973-18698034)
chr4 (1-45)||(10353006-10353050)
chr4 (9-45)||(49908782-49908818)
chr4 (10-45)||(6212029-6212064)
chr4 (1-44)||(30109958-30110001)
chr4 (1-63)||(17511356-17511417)
chr4 (14-63)||(27363344-27363393)
chr4 (1-63)||(40528996-40529060)
chr4 (1-46)||(42333898-42333943)
chr4 (9-45)||(5517494-5517530)
[»] scaffold0349 (1 HSPs)
scaffold0349 (187-335)||(2113-2264)
[»] chr8 (12 HSPs)
chr8 (187-335)||(29272412-29272563)
chr8 (1-66)||(39914495-39914560)
chr8 (1-63)||(29728508-29728570)
chr8 (1-62)||(15838270-15838331)
chr8 (1-68)||(34136947-34137014)
chr8 (1-42)||(16788147-16788188)
chr8 (1-45)||(4404009-4404053)
chr8 (1-45)||(36408552-36408596)
chr8 (3-45)||(23402109-23402151)
chr8 (1-45)||(2729318-2729362)
chr8 (1-63)||(3648916-3648978)
chr8 (109-243)||(16371630-16371764)
[»] chr2 (15 HSPs)
chr2 (1-67)||(6403926-6403992)
chr2 (1-66)||(41251756-41251821)
chr2 (2-66)||(17445162-17445226)
chr2 (1-66)||(42439966-42440031)
chr2 (1-67)||(32127263-32127329)
chr2 (1-66)||(35962695-35962760)
chr2 (7-66)||(2958228-2958287)
chr2 (152-235)||(17991739-17991822)
chr2 (2-67)||(16405579-16405644)
chr2 (1-66)||(18981597-18981661)
chr2 (4-45)||(45418584-45418625)
chr2 (1-45)||(8147352-8147396)
chr2 (1-45)||(44084725-44084769)
chr2 (1-40)||(771005-771044)
chr2 (7-45)||(26237958-26237996)
[»] scaffold1870 (2 HSPs)
scaffold1870 (125-246)||(330-451)
scaffold1870 (270-327)||(234-291)
[»] scaffold0419 (2 HSPs)
scaffold0419 (125-246)||(9048-9169)
scaffold0419 (270-327)||(8952-9009)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-66)||(480579-480644)
[»] chr7 (11 HSPs)
chr7 (1-66)||(14777229-14777294)
chr7 (1-66)||(5555467-5555532)
chr7 (1-62)||(8394109-8394170)
chr7 (1-67)||(3114218-3114284)
chr7 (1-62)||(36630800-36630861)
chr7 (1-45)||(34389178-34389222)
chr7 (3-45)||(8867855-8867897)
chr7 (1-33)||(10876829-10876861)
chr7 (1-45)||(33685565-33685609)
chr7 (1-37)||(35090177-35090213)
chr7 (1-45)||(37002266-37002310)
[»] chr3 (14 HSPs)
chr3 (1-66)||(22968566-22968631)
chr3 (1-66)||(39771770-39771835)
chr3 (1-66)||(6269548-6269613)
chr3 (1-66)||(19390126-19390191)
chr3 (1-62)||(34084244-34084305)
chr3 (4-45)||(45182982-45183023)
chr3 (3-66)||(6503693-6503756)
chr3 (1-67)||(11018334-11018400)
chr3 (4-45)||(6931019-6931060)
chr3 (1-62)||(22922141-22922202)
chr3 (3-45)||(33040954-33040996)
chr3 (1-42)||(27935182-27935223)
chr3 (9-45)||(6890999-6891035)
chr3 (1-45)||(19565623-19565667)
[»] scaffold2142 (1 HSPs)
scaffold2142 (1-67)||(501-567)
[»] scaffold0277 (4 HSPs)
scaffold0277 (125-235)||(3215-3325)
scaffold0277 (125-235)||(12178-12288)
scaffold0277 (270-335)||(3372-3437)
scaffold0277 (270-335)||(12335-12400)
[»] chr5 (15 HSPs)
chr5 (1-66)||(26283440-26283505)
chr5 (1-66)||(39434676-39434741)
chr5 (1-63)||(13817960-13818022)
chr5 (1-68)||(10033905-10033972)
chr5 (126-244)||(16692412-16692530)
chr5 (5-67)||(36293747-36293809)
chr5 (5-62)||(1776502-1776559)
chr5 (1-66)||(3155753-3155818)
chr5 (1-44)||(19985941-19985984)
chr5 (6-45)||(31680368-31680407)
chr5 (3-45)||(17332675-17332717)
chr5 (1-45)||(12278982-12279026)
chr5 (1-45)||(31501838-31501882)
chr5 (1-45)||(37254642-37254686)
chr5 (10-63)||(14316641-14316694)
[»] scaffold0069 (1 HSPs)
scaffold0069 (1-67)||(17821-17887)
[»] scaffold0502 (1 HSPs)
scaffold0502 (1-45)||(5231-5275)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-45)||(31481-31525)


Alignment Details
Target: chr6 (Bit Score: 250; Significance: 1e-139; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 63 - 336
Target Start/End: Complemental strand, 26057651 - 26057378
Alignment:
Q  63 catggctaaagctaaaacaacaaattgttcataaatattagttttccttaccgtattatctcttaaaacgttaactatatcatcgcgaaaccacaaccta 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26057651 catggctaaagctaaaacaacaaattgttcataaatattagttttctttaccgtattatctcttaaaacgttaactatatcatcgcgaaaccacaaccta 26057552  T
Q  163 ctgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaat 262  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26057551 ctgcgttctccaggcttattgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaat 26057452  T
Q  263 ggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatt 336  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  26057451 ggcctatgagagatttttcagccaacactccaacatgatgttctatgggatggccataatgagcatgaagtatt 26057378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 63 - 336
Target Start/End: Complemental strand, 26077621 - 26077348
Alignment:
Q  63 catggctaaagctaaaacaacaaattgttcataaatattagttttccttaccgtattatctcttaaaacgttaactatatcatcgcgaaaccacaaccta 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26077621 catggctaaagctaaaacaacaaattgttcataaatattagttttctttaccgtattatctcttaaaacgttaactatatcatcgcgaaaccacaaccta 26077522  T
Q  163 ctgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaat 262  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26077521 ctgcgttctccaggcttcttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaat 26077422  T
Q  263 ggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatt 336  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  26077421 ggcctatgagagatttttcagccaacactccaacatgatgttctatgggatggccataatgagcatgaagtatt 26077348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 63 - 336
Target Start/End: Complemental strand, 26144597 - 26144324
Alignment:
Q  63 catggctaaagctaaaacaacaaattgttcataaatattagttttccttaccgtattatctcttaaaacgttaactatatcatcgcgaaaccacaaccta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26144597 catggctaaagctaaaacaacaaattgttcataaatattagttttccttactgtattatctcttaaaacgttaactatatcatcgggaaaccacaaccta 26144498  T
Q  163 ctgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaat 262  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26144497 ctgcgttctccaggcttgttgggagattcttgtcggacgatttctttacccatgtcctctatcaagtcatgtaaggtcacataagtgtcatattcccaat 26144398  T
Q  263 ggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatt 336  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26144397 ggcctatgagagatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatt 26144324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 63 - 336
Target Start/End: Complemental strand, 25512620 - 25512347
Alignment:
Q  63 catggctaaagctaaaacaacaaattgttcataaatattagttttccttaccgtattatctcttaaaacgttaactatatcatcgcgaaaccacaaccta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25512620 catggctaaagctaaaacaacaaattgttcataaatattagttttgcttaccgtattatctcttaaaacgttaagtatatcatcgcgaaaccacaaccta 25512521  T
Q  163 ctgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaat 262  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25512520 ctgcgttctccaggcttgttgggagattcttgtcggacggtttctttacccatgtcctctatcaagtcatgtaaggtcacataagtgtcatattcccaat 25512421  T
Q  263 ggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatt 336  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25512420 ggcctatgagagatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatt 25512347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 63 - 336
Target Start/End: Complemental strand, 25484788 - 25484515
Alignment:
Q  63 catggctaaagctaaaacaacaaattgttcataaatattagttttccttaccgtattatctcttaaaacgttaactatatcatcgcgaaaccacaaccta 162  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  25484788 catggctaaagctaaaacaacaaattgttcagaaatattagttttccttaccatattatctcttaaaacgttaagtatatcatcgtgaaaccacaaccta 25484689  T
Q  163 ctgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaat 262  Q
    ||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25484688 ctgcgttctccaggcttcttgggagattcttgtcgaacgacttctttacccatgtcctctatcaagtcatgtaaggtcacataagtgtcatattcccaat 25484589  T
Q  263 ggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatt 336  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25484588 gacctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatt 25484515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 63 - 336
Target Start/End: Complemental strand, 25581451 - 25581178
Alignment:
Q  63 catggctaaagctaaaacaacaaattgttcataaatattagttttccttaccgtattatctcttaaaacgttaactatatcatcgcgaaaccacaaccta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| || |||||||||| ||||||||||||||    
T  25581451 catggctaaagctaaaacaacaaattgttcataaatattagttttgcttactgtattatctcttaaaacgtcaaatatatcatcgtgaaaccacaaccta 25581352  T
Q  163 ctgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaat 262  Q
    ||||||||||||||  | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  25581351 ctgcgttctccagggttcttgggagattcttgtcggacgatttctttacccatgtcctctatcaagtcatgtaaggtcatctgagtgtcatattcccaat 25581252  T
Q  263 ggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatt 336  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25581251 ggcctatgagagatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatt 25581178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 63 - 244
Target Start/End: Complemental strand, 25546712 - 25546531
Alignment:
Q  63 catggctaaagctaaaacaacaaattgttcataaatattagttttccttaccgtattatctcttaaaacgttaactatatcatcgcgaaaccacaaccta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25546712 catggctaaagctaaaacaacaaattgttcataaatattagtttttcttaccgtattatctcttaaaacgttaactatatcatcgcgaaaccacaaccta 25546613  T
Q  163 ctgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacat 244  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25546612 ctgcgttctccaggcttgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacat 25546531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 150 - 336
Target Start/End: Original strand, 27529844 - 27530030
Alignment:
Q  150 aaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtg 249  Q
    ||||||||||||||||||||||||||||   | ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |     
T  27529844 aaaccacaacctactgcgttctccaggctcatcgggtgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaatgtcacataacta 27529943  T
Q  250 tcatattcccaatggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatt 336  Q
    ||||||| | ||||| | |||||| ||||||||||||| ||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  27529944 tcatatttcaaatggtccatgagagatttttcagccaaaactgcaacatgatgtactatgcaatgaccataatgagcatgaagtatt 27530030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 75 - 335
Target Start/End: Complemental strand, 27216169 - 27215909
Alignment:
Q  75 taaaacaacaaattgttcataaatattagttttccttaccgtattatctcttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctcca 174  Q
    ||||| |||||||||||||||||||||| |||| || ||  |||| ||| ||| ||| | ||||||||||||| |||||||||||||||||||||| |||    
T  27216169 taaaataacaaattgttcataaatattatttttactcacgatattttcttttagaacttgaactatatcatcgtgaaaccacaacctactgcgttcccca 27216070  T
Q  175 ggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaatggcctatgagac 274  Q
    ||  ||| ||| |||||||||||||| |||||| ||||||| ||||||||||||||||||||  ||| || | | |||| |||||  |||   ||||||     
T  27216069 ggattgtcgggtgattcttgtcggacaacttctctacccatatcctctatcaagtcatgtaatctcatataactatcattttcccggtggttaatgagag 27215970  T
Q  275 atttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtat 335  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||||| |||||||||||    
T  27215969 atttttcggccaacacttcaacatgatgttttatgcaatggccataatgggcatgaagtat 27215909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 187 - 335
Target Start/End: Complemental strand, 31286164 - 31286016
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaatggcctatgagacatttttcagcca 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||  |   |||||||||||| || |||||||| ||||||||||||    
T  31286164 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaatcccacacaaccatcatattcccaacggtctatgagagatttttcagcca 31286065  T
Q  287 acactccaacatgatgttctatgcaatggccataatgagcatgaagtat 335  Q
    ||||| | | |||||||  |||||||||||||||||||||||| |||||    
T  31286064 acacttctagatgatgtgttatgcaatggccataatgagcatggagtat 31286016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 187 - 333
Target Start/End: Original strand, 27609694 - 27609843
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaa---tggcctatgagacatttttcag 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |  |  ||||||||||   ||| |||||||| |||||||||    
T  27609694 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatcgcgatattcccaatattggtctatgagagatttttcag 27609793  T
Q  284 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagt 333  Q
    |||||||||| | |||||||  |||| ||||||||||||||| |||||||    
T  27609794 ccaacactcctagatgatgtgttatggaatggccataatgagaatgaagt 27609843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 187 - 336
Target Start/End: Original strand, 27426189 - 27426338
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaatggcctatgagacatttttcagcca 286  Q
    |||||| ||||||||| |||||||||||||| ||||||||||| |||||| | ||||||| | || |||||  ||||| | ||||||||||||||| | |    
T  27426189 gattctagtcggacgagttctttacccatgttctctatcaagttatgtaatgacacatgactatcgtattcaaaatggtcaatgagacatttttcaacta 27426288  T
Q  287 acactccaacatgatgttctatgcaatggccataatgagcatgaagtatt 336  Q
     |||| |||||||||| | ||||||||| |||||||||||||||||||||    
T  27426289 gcacttcaacatgatgatttatgcaatgaccataatgagcatgaagtatt 27426338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 187 - 335
Target Start/End: Original strand, 27717073 - 27717224
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattccc--aatggc-ctatgagacatttttcag 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |  |||||||||||  |||  |  ||||||| ||||||||     
T  27717073 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatcgtcatattcccgtaatttctttatgagagatttttcaa 27717172  T
Q  284 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtat 335  Q
    |||||||||| | |||||||  |||||||||||||||||||| || ||||||    
T  27717173 ccaacactcctagatgatgtgttatgcaatggccataatgagaattaagtat 27717224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 187 - 332
Target Start/End: Original strand, 27697163 - 27697308
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattccc---aatggcctatgagacatttttcag 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |    |||||||||   | |||  ||||||| |||||||||    
T  27697163 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaatgtcacacaa---ccatattccctatattggtttatgagagatttttcag 27697259  T
Q  284 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaag 332  Q
    |||||||| | | |||||||  |||| ||||||||||||||||||||||    
T  27697260 ccaacactgctagatgatgtgttatggaatggccataatgagcatgaag 27697308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 125 - 236
Target Start/End: Complemental strand, 28787923 - 28787812
Alignment:
Q  125 ttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctat 224  Q
    ||||||| ||||||||||||||  || |||| |||||||| | ||||||||||   || || |||||||||||||||||||||||||||||||| |||||    
T  28787923 ttaaaacattaactatatcatcttgacaccataacctacttctttctccaggctctttaggcgattcttgtcggacgacttctttacccatgtcttctat 28787824  T
Q  225 caagtcatgtaa 236  Q
    ||||||||||||    
T  28787823 caagtcatgtaa 28787812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 125 - 236
Target Start/End: Complemental strand, 28794044 - 28793933
Alignment:
Q  125 ttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctat 224  Q
    ||||||| ||||||||||||||  || |||| |||||||| | ||||||||||   || || |||||||||||||||||||||||||||||||| |||||    
T  28794044 ttaaaacattaactatatcatcttgacaccataacctacttctttctccaggctctttaggcgattcttgtcggacgacttctttacccatgtcttctat 28793945  T
Q  225 caagtcatgtaa 236  Q
    ||||||||||||    
T  28793944 caagtcatgtaa 28793933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 86 - 236
Target Start/End: Original strand, 25491780 - 25491930
Alignment:
Q  86 attgttcataaatattagttttccttaccgtattatctcttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttggg 185  Q
    |||||||||| |||| | | || |||||||| || ||||||||||| | ||| ||||||||| || ||||||||||||| |||||||||||    ||  |    
T  25491780 attgttcatagatatcaatcttacttaccgtgttttctcttaaaacttgaaccatatcatcgggacaccacaacctactacgttctccaggatcattacg 25491879  T
Q  186 agattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 236  Q
     ||||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  25491880 tgattcttgtcgaacgacttctttacccatgtgctctatcaagttatgtaa 25491930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 398662 - 398597
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  398662 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 398597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 126 - 242
Target Start/End: Complemental strand, 26637309 - 26637193
Alignment:
Q  126 taaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatc 225  Q
    |||||| | ||||||||| ||  || |||||||||||||||||||||||||| | ||  | |||||||||||||||| |||| ||||||| |||||||||    
T  26637309 taaaacatgaactatatcgtcatgacaccacaacctactgcgttctccaggcttattacgtgattcttgtcggacgatttctatacccatatcctctatc 26637210  T
Q  226 aagtcatgtaaggtcac 242  Q
    ||||||||||| |||||    
T  26637209 aagtcatgtaatgtcac 26637193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 126 - 242
Target Start/End: Complemental strand, 26743275 - 26743159
Alignment:
Q  126 taaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatc 225  Q
    |||||| | ||||||||| ||  || |||||||||||||||||||||||||| | ||  | |||||||||||||||| |||| ||||||| |||||||||    
T  26743275 taaaacatgaactatatcgtcatgacaccacaacctactgcgttctccaggcttattacgtgattcttgtcggacgatttctatacccatatcctctatc 26743176  T
Q  226 aagtcatgtaaggtcac 242  Q
    ||||||||||| |||||    
T  26743175 aagtcatgtaatgtcac 26743159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 81 - 324
Target Start/End: Complemental strand, 26863285 - 26863048
Alignment:
Q  81 aacaaattgttcataaatattagttttccttaccgtattatctcttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctg 180  Q
    |||| ||||||||||||||| | | || || || || || |||  ||||||||  | |||||||||  || |||| |||||||| ||||| || |||       
T  26863285 aacagattgttcataaatatcaatcttactcacagtgttttcttctaaaacgtggattatatcatcatgacaccataacctacttcgttcacccggctct 26863186  T
Q  181 ttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaatggcctatgagacattttt 280  Q
    || ||||||||||||||||||| |||||| ||||||||||||||||||||||||||  |||||  |    |||||      |||  ||||||| ||||||    
T  26863185 ttaggagattcttgtcggacgatttctttgcccatgtcctctatcaagtcatgtaatctcacactaagaccatat------tggtatatgagagattttt 26863092  T
Q  281 cagccaacactccaacatgatgttctatgcaatggccataatga 324  Q
    |||||||||||||||||||||||| ||||||  |||||||||||    
T  26863091 cagccaacactccaacatgatgttttatgcatcggccataatga 26863048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 241
Target Start/End: Complemental strand, 26624932 - 26624816
Alignment:
Q  125 ttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctat 224  Q
    ||||||| | || |||||||||  || |||| || ||||| ||||||||||||   || || |||||||||||||||| | |||||||||||||||||||    
T  26624932 ttaaaacatgaaatatatcatcttgacaccataatctacttcgttctccaggctctttaggtgattcttgtcggacgattgctttacccatgtcctctat 26624833  T
Q  225 caagtcatgtaaggtca 241  Q
    |||||||||||||||||    
T  26624832 caagtcatgtaaggtca 26624816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 241
Target Start/End: Complemental strand, 26730909 - 26730793
Alignment:
Q  125 ttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctat 224  Q
    ||||||| | || |||||||||  || |||| || ||||| ||||||||||||   || || |||||||||||||||| | |||||||||||||||||||    
T  26730909 ttaaaacatgaaatatatcatcttgacaccataatctacttcgttctccaggctctttaggtgattcttgtcggacgattgctttacccatgtcctctat 26730810  T
Q  225 caagtcatgtaaggtca 241  Q
    |||||||||||||||||    
T  26730809 caagtcatgtaaggtca 26730793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 27680600 - 27680521
Alignment:
Q  157 aacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 236  Q
    |||||||| ||||||||||||   || || |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27680600 aacctacttcgttctccaggctctttaggtgattcttgtcggacgacttctttacccatgtcctttatcaagtcatgtaa 27680521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 270 - 335
Target Start/End: Complemental strand, 26885589 - 26885524
Alignment:
Q  270 gagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtat 335  Q
    |||| |||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26885589 gagagatttttcgaccaacactccaacatgatgttttatgcaatggccataatgagcatgaagtat 26885524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 242
Target Start/End: Original strand, 27591527 - 27591644
Alignment:
Q  125 ttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctat 224  Q
    ||||||| | ||||||||||||  || |||| ||||| || | ||||||||||   || || |||||||||||||||||||||||||||||| |||||||    
T  27591527 ttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctctttaggtgattcttgtcggacgacttctttacccatgacctctat 27591626  T
Q  225 caagtcatgtaaggtcac 242  Q
    ||| |||||||| |||||    
T  27591627 caattcatgtaatgtcac 27591644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 138 - 242
Target Start/End: Complemental strand, 25075536 - 25075432
Alignment:
Q  138 tatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaag 237  Q
    |||||||||| || ||||||||||||| ||||||||||||   ||    ||||| |||||||||| |||||||||||||||||||| ||||||||||||     
T  25075536 tatatcatcgtgataccacaacctactacgttctccaggctctttaattgattcatgtcggacgatttctttacccatgtcctctaacaagtcatgtaat 25075437  T
Q  238 gtcac 242  Q
    |||||    
T  25075436 gtcac 25075432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 2186460 - 2186369
Alignment:
Q  152 accacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcaca 243  Q
    ||||||||||||| |||| |||||||   || || ||||||||||| |||| |||||||||||| |||||||||||||||||||| ||||||    
T  2186460 accacaacctactacgttttccaggctcttttggtgattcttgtcgtacgatttctttacccatttcctctatcaagtcatgtaatgtcaca 2186369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 26850332 - 26850277
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcac 242  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  26850332 gattcttgtcggacgatttctttacccatgtcctctatcaagtcatgtaatgtcac 26850277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 126 - 244
Target Start/End: Complemental strand, 26885751 - 26885633
Alignment:
Q  126 taaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatc 225  Q
    |||||| | ||||||||||||| || |||| |||||||| ||||||||||||   ||    |||||||| || |||| |||||||||||||||||||| |    
T  26885751 taaaacatgaactatatcatcgtgacaccataacctactacgttctccaggctctttacttgattcttgccgaacgatttctttacccatgtcctctacc 26885652  T
Q  226 aagtcatgtaaggtcacat 244  Q
    ||||||||||| |||||||    
T  26885651 aagtcatgtaatgtcacat 26885633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 135 - 229
Target Start/End: Original strand, 27603217 - 27603311
Alignment:
Q  135 aactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagt 229  Q
    ||||||||| ||  || |||| |||||||| | ||||||||||   || || |||||||||||||||||||||||||||||||||||||||||||    
T  27603217 aactatatcgtcttgacaccataacctacttctttctccaggctctttaggtgattcttgtcggacgacttctttacccatgtcctctatcaagt 27603311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 242
Target Start/End: Original strand, 27676126 - 27676243
Alignment:
Q  125 ttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctat 224  Q
    ||||||| | ||||||||||||  || |||| ||||| || | ||||||||||   || || |||||||||||||| ||||||||||||||| |||||||    
T  27676126 ttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctctttaggtgattcttgtcggaccacttctttacccatgacctctat 27676225  T
Q  225 caagtcatgtaaggtcac 242  Q
    ||| |||||||| |||||    
T  27676226 caattcatgtaatgtcac 27676243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 27704837 - 27704894
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacat 244  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||    
T  27704837 gattcttgtcggacgacttctttacccatatcctctatcaagttatgtaatgtcacat 27704894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 34948880 - 34948945
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    |||||||||||||||||||||||  ||||||||||| |||||||| | ||||||||||||||||||    
T  34948880 tgtgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgccatacggtagaaccgcccatg 34948945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 324
Target Start/End: Complemental strand, 26648184 - 26647947
Alignment:
Q  81 aacaaattgttcataaatattagttttccttaccgtattatctcttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctg 180  Q
    ||||||||| ||||| |||||| | || || || || || ||| ||||||| | |||||| |||||  || |||| ||||||||  |||||||||||       
T  26648184 aacaaattgatcatagatattaatcttactcacagtgttttcttttaaaacatgaactatttcatcttgacaccataacctactttgttctccaggctct 26648085  T
Q  181 ttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaatggcctatgagacattttt 280  Q
    ||  | |||||||||||||| ||||| ||||||||||||| |||||||||||||||  ||| || |   | || |      |||   |||||| ||||||    
T  26648084 ttacgtgattcttgtcggactacttccttacccatgtcctttatcaagtcatgtaatctcagataaccatgattt------tggtaaatgagagattttt 26647991  T
Q  281 cagccaacactccaacatgatgttctatgcaatggccataatga 324  Q
    ||||||||||||||| |||||||  |||||||||||||||||||    
T  26647990 cagccaacactccaagatgatgtgttatgcaatggccataatga 26647947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 324
Target Start/End: Complemental strand, 26754152 - 26753915
Alignment:
Q  81 aacaaattgttcataaatattagttttccttaccgtattatctcttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctg 180  Q
    ||||||||| ||||| |||||| | || || || || || ||| ||||||| | |||||| |||||  || |||| ||||||||  |||||||||||       
T  26754152 aacaaattgatcatagatattaatcttactcacagtgttttcttttaaaacatgaactatttcatcttgacaccataacctactttgttctccaggctct 26754053  T
Q  181 ttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaatggcctatgagacattttt 280  Q
    ||  | |||||||||||||| ||||| ||||||||||||| |||||||||||||||  ||| || |   | || |      |||   |||||| ||||||    
T  26754052 ttacgtgattcttgtcggactacttccttacccatgtcctttatcaagtcatgtaatctcagataaccatgattt------tggtaaatgagagattttt 26753959  T
Q  281 cagccaacactccaacatgatgttctatgcaatggccataatga 324  Q
    ||||||||||||||| |||||||  |||||||||||||||||||    
T  26753958 cagccaacactccaagatgatgtgttatgcaatggccataatga 26753915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 26804066 - 26804018
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgta 235  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26804066 gattcttgtcggacgacttctttacccatgtcctttatcaagtcatgta 26804018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 266 - 333
Target Start/End: Complemental strand, 26657488 - 26657421
Alignment:
Q  266 ctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagt 333  Q
    |||||||| |||||||| ||||||||||||||||||||| ||||||||| ||||| |||||| |||||    
T  26657488 ctatgagagatttttcaaccaacactccaacatgatgttttatgcaatgaccatagtgagcaagaagt 26657421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 266 - 333
Target Start/End: Complemental strand, 26763459 - 26763392
Alignment:
Q  266 ctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagt 333  Q
    |||||||| |||||||| ||||||||||||||||||||| ||||||||| ||||| |||||| |||||    
T  26763459 ctatgagagatttttcaaccaacactccaacatgatgttttatgcaatgaccatagtgagcaagaagt 26763392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 26803970 - 26803903
Alignment:
Q  268 atgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtat 335  Q
    |||||| ||||||||||||||||||| | |||||||  ||||||||||||||||||| ||||||||||    
T  26803970 atgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgaacatgaagtat 26803903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 126 - 243
Target Start/End: Complemental strand, 26951412 - 26951295
Alignment:
Q  126 taaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatc 225  Q
    |||||| | ||| |||||||| ||| |||||||||||||||||||||||||     |    ||||||||||||| || |||| ||||||| |||||||||    
T  26951412 taaaacatgaacaatatcatcacgagaccacaacctactgcgttctccaggttctctaattgattcttgtcggatgatttctatacccatatcctctatc 26951313  T
Q  226 aagtcatgtaaggtcaca 243  Q
    ||||||||||| ||||||    
T  26951312 aagtcatgtaatgtcaca 26951295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 270 - 335
Target Start/End: Complemental strand, 28787760 - 28787695
Alignment:
Q  270 gagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtat 335  Q
    |||| ||||||||||||||||||| | |||||||  |||||||||||||||||||||| |||||||    
T  28787760 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagtat 28787695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 270 - 335
Target Start/End: Complemental strand, 28793881 - 28793816
Alignment:
Q  270 gagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtat 335  Q
    |||| ||||||||||||||||||| | |||||||  |||||||||||||||||||||| |||||||    
T  28793881 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagtat 28793816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 28996772 - 28996731
Alignment:
Q  4 gcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  28996772 gcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 28996731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 335
Target Start/End: Original strand, 27603369 - 27603429
Alignment:
Q  275 atttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtat 335  Q
    ||||||||||||||||||| | |||||||  |||||||||||||||||||||| |||||||    
T  27603369 atttttcagccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagtat 27603429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 29827633 - 29827541
Alignment:
Q  151 aaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcaca 243  Q
    |||||||||||||| || | |||||||   || || ||||||||||| || | ||||||||||||||| ||||||||||||||||| ||||||    
T  29827633 aaccacaacctactacgctttccaggctctttcggtgattcttgtcgtacaatttctttacccatgtcttctatcaagtcatgtaatgtcaca 29827541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 333
Target Start/End: Complemental strand, 26938554 - 26938488
Alignment:
Q  267 tatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagt 333  Q
    ||||||| |||| | | |||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  26938554 tatgagagatttattaaccaacactccaacatgattttttatgcaatgaccataatgagcatgaagt 26938488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 13837862 - 13837801
Alignment:
Q  5 caaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||| | || |||| ||||||||||||| | ||||||||||||||||||    
T  13837862 caaaaattatcgatcgaacccgagcgatcgcccggggtcgccatacggtagaaccgcccatg 13837801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 332
Target Start/End: Complemental strand, 26624796 - 26624731
Alignment:
Q  267 tatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaag 332  Q
    |||||||||||| ||| |||||||||| | |||||||  |||||||||||||||||||||| ||||    
T  26624796 tatgagacatttgtcaaccaacactcctagatgatgtgttatgcaatggccataatgagcacgaag 26624731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 26657582 - 26657533
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 236  Q
    |||||||||||||||| |||||||||||||||||||||||| || |||||    
T  26657582 gattcttgtcggacgatttctttacccatgtcctctatcaaatcgtgtaa 26657533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 332
Target Start/End: Complemental strand, 26730773 - 26730708
Alignment:
Q  267 tatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaag 332  Q
    |||||||||||| ||| |||||||||| | |||||||  |||||||||||||||||||||| ||||    
T  26730773 tatgagacatttgtcaaccaacactcctagatgatgtgttatgcaatggccataatgagcacgaag 26730708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 26763553 - 26763504
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 236  Q
    |||||||||||||||| |||||||||||||||||||||||| || |||||    
T  26763553 gattcttgtcggacgatttctttacccatgtcctctatcaaatcgtgtaa 26763504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 26825345 - 26825276
Alignment:
Q  266 ctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtat 335  Q
    |||||||| ||||||| |||||||||  ||||||||||| |||||||||||| ||||||| | |||||||    
T  26825345 ctatgagagatttttctgccaacacttgaacatgatgttttatgcaatggccgtaatgagtacgaagtat 26825276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 26825433 - 26825376
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacat 244  Q
    |||| ||||||||| |||||||| |||||||||| ||||||||||||||| |||||||    
T  26825433 gattgttgtcggactacttctttgcccatgtcctttatcaagtcatgtaatgtcacat 26825376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 243
Target Start/End: Complemental strand, 26960794 - 26960677
Alignment:
Q  126 taaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatc 225  Q
    |||||| | |||||||||||| ||| |||||||||||||||||| |||||||   ||    ||||| ||||| || | |||  ||||||| |||||||||    
T  26960794 taaaacatgaactatatcatcacgacaccacaacctactgcgttttccaggctctttaattgattcctgtcgaacaatttccatacccatatcctctatc 26960695  T
Q  226 aagtcatgtaaggtcaca 243  Q
    ||||||||||| ||||||    
T  26960694 aagtcatgtaatgtcaca 26960677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 28141146 - 28141089
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacat 244  Q
    ||||||||||| || | |||||||||||| |||||||||||||||||||| |||||||    
T  28141146 gattcttgtcgaacaatttctttacccatctcctctatcaagtcatgtaatgtcacat 28141089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18339151 - 18339107
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    |||||||||||||| |||||||| |||||||||||||||||||||    
T  18339151 tgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgc 18339107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 26979023 - 26978939
Alignment:
Q  152 accacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 236  Q
    |||||||||||||||||||||||||    ||    |||||||||||||||| |||| ||||||| ||||||||||||| ||||||    
T  26979023 accacaacctactgcgttctccaggttctttaattgattcttgtcggacgatttctatacccatatcctctatcaagtaatgtaa 26978939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 26938709 - 26938582
Alignment:
Q  109 cttaccgtattatctcttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctt 208  Q
    ||||||||||| ||| |||| || | ||||||||| | |  ||||||||| ||| |||||||||||| |   |||   ||||||||||  || | |||||    
T  26938709 cttaccgtattttcttttaatacatgaactatatctttgtcaaaccacaatctagtgcgttctccagcctctttgactgattcttgtctaacaatttctt 26938610  T
Q  209 tacccatgtcctctatcaagtcatgtaa 236  Q
    ||||||||||||| ||||||||||||||    
T  26938609 tacccatgtcctcaatcaagtcatgtaa 26938582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 28150783 - 28150734
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 236  Q
    ||||||||||| || | ||||||||||||||| |||||||||||||||||    
T  28150783 gattcttgtcgtacaatttctttacccatgtcttctatcaagtcatgtaa 28150734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 28097023 - 28097079
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcaca 243  Q
    ||||||||||  || | ||||||||||||||| ||||||||||||||||| ||||||    
T  28097023 gattcttgtcttacaatttctttacccatgtcttctatcaagtcatgtaatgtcaca 28097079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 13647053 - 13647018
Alignment:
Q  10 attatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    |||||||||||||| |||||||||||||||||||||    
T  13647053 attatcgatcgagcccgggcgaccgcccggggtcgc 13647018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 26813157 - 26813102
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcac 242  Q
    ||||||||| |||| | |||||||||| ||| |||||||||||||||||| |||||    
T  26813157 gattcttgttggacaatttctttacccgtgtgctctatcaagtcatgtaatgtcac 26813102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 27663777 - 27663826
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 236  Q
    |||||||||||||| | |||| ||||||| | ||||||||||||||||||    
T  27663777 gattcttgtcggactatttctatacccatatactctatcaagtcatgtaa 27663826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 327
Target Start/End: Complemental strand, 27680472 - 27680415
Alignment:
Q  270 gagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagca 327  Q
    |||| ||||| ||||||||||||| | |||||||  |||||||||| |||||||||||    
T  27680472 gagagattttccagccaacactcctagatgatgtgttatgcaatggtcataatgagca 27680415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 28187047 - 28186955
Alignment:
Q  151 aaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcaca 243  Q
    |||||||||||||| |||  |||||||   || ||||| ||||  ||||| | |||||||||||| | |||||||||| ||||||| ||||||    
T  28187047 aaccacaacctactacgtcttccaggctcttttggagactctttccggacaatttctttacccattttctctatcaaggcatgtaacgtcaca 28186955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 29842563 - 29842611
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgta 235  Q
    |||||| |||| || | ||||||||||||||| ||||||||||||||||    
T  29842563 gattctggtcgtacaatttctttacccatgtcttctatcaagtcatgta 29842611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31028486 - 31028530
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||||||||||  ||||| ||||| |||||||||    
T  31028486 tgtgcaaaaattatcgatcgagtccgggcaaccgctcggggtcgc 31028530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 125 - 335
Target Start/End: Original strand, 266861 - 267065
Alignment:
Q  125 ttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctat 224  Q
    ||||||| | ||||||||||||  || |||| |||||||| ||||||||||||   || || |||||||| ||||| |||||||||||||||||||||||    
T  266861 ttaaaacatgaactatatcatcttgacaccataacctacttcgttctccaggctctttaggtgattcttggcggaccacttctttacccatgtcctctat 266960  T
Q  225 caagtcatgtaaggtcacatgagtgtcatattcccaatggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatga 324  Q
    || ||||||||| ||||||||| | | ||||      ||| |||||||| ||||||||||||||||||| | |||||||  |||||| ||||||||||||    
T  266961 catgtcatgtaatgtcacatgactataatat------tggtctatgagagatttttcagccaacactcctagatgatgtgttatgcagtggccataatga 267054  T
Q  325 gcatgaagtat 335  Q
    | |||||||||    
T  267055 gaatgaagtat 267065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 102 - 236
Target Start/End: Complemental strand, 26137575 - 26137441
Alignment:
Q  102 agttttccttaccgtattatctcttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacg 201  Q
    |||||| || || ||||| ||| ||||||| | ||||||||| ||  ||||||||||||||||||||| ||||||    ||||| ||||||||||||||     
T  26137575 agttttactcactgtattttcttttaaaacatgaactatatcttcatgaaaccacaacctactgcgttttccaggttctttgggtgattcttgtcggaca 26137476  T
Q  202 acttctttacccatgtcctctatcaagtcatgtaa 236  Q
    | |||||||||||| ||||||||||||||||||||    
T  26137475 atttctttacccatatcctctatcaagtcatgtaa 26137441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 26144300 - 26144235
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  26144300 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 26144235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 335
Target Start/End: Original strand, 28126206 - 28126400
Alignment:
Q  135 aactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgt 234  Q
    ||||||||||| | || |||| |||||  ||||||||||||||   ||  | |||||||  ||||||| |||||||||| | ||||||||||||||||||    
T  28126206 aactatatcattgtgacaccataacctgttgcgttctccaggctctttacgtgattctttccggacgatttctttacccgtatcctctatcaagtcatgt 28126305  T
Q  235 aaggtcacat---gagtgtcatattcccaatggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaa 331  Q
    || |||||||   |||| |  || || |||||       ||| |||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||    
T  28126306 aatgtcacatattgagtat--taatctcaatg-------agagatttttcaaccaacactccaacatgatgctttatgcaatggccataatgagcatgaa 28126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 7433490 - 7433425
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    |||||||||||||| ||||||||||||||||||||||||||| || | ||||||||||||||||||    
T  7433490 tgtgcaaaaattatagatcgagctcgggcgaccgcccggggttgccatacggtagaaccgcccatg 7433425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 28132157 - 28132226
Alignment:
Q  266 ctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtat 335  Q
    |||||||| |||||||  ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  28132157 ctatgagagatttttcgaccaacactccaacatgatgttttatgcaatggccattatgagcatgaagtat 28132226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32982178 - 32982236
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaacc 59  Q
    |||||||||||||||||||| || || |||||||||||||||||| | |||||||||||    
T  32982178 tgtgcaaaaattatcgatcgggcccgcgcgaccgcccggggtcgccatacggtagaacc 32982236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 41972397 - 41972458
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgccc 63  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||  ||||| |||||||||    
T  41972397 tgtgcaaaaattatcgatcgagc-caggcgaccgcccggggtcgctggacggtggaaccgccc 41972458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 42311063 - 42311125
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgccc 63  Q
    ||||||||||||||||||||||| ||||||| || | |||||||| | |||||||||||||||    
T  42311063 tgtgcaaaaattatcgatcgagcccgggcgatcgtctggggtcgccatacggtagaaccgccc 42311125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35907597 - 35907553
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||    
T  35907597 tgtgcaaaaattatcgatcaagcccgggcgaccgcccgaggtcgc 35907553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 335
Target Start/End: Complemental strand, 26137396 - 26137345
Alignment:
Q  284 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtat 335  Q
    |||||||||||||||||  || |||||||||| ||||| |||||||||||||    
T  26137396 ccaacactccaacatgactttttatgcaatggtcataacgagcatgaagtat 26137345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 187 - 336
Target Start/End: Complemental strand, 61174 - 61025
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaatggcctatgagacatttttcagcca 286  Q
    |||||| ||||||||| |||||||||||||| ||||||||||| |||||| | ||||||| | || |||||  ||||| | ||||||||||||||| | |    
T  61174 gattctagtcggacgagttctttacccatgttctctatcaagttatgtaatgacacatgactatcgtattcaaaatggtcaatgagacatttttcaacta 61075  T
Q  287 acactccaacatgatgttctatgcaatggccataatgagcatgaagtatt 336  Q
     |||| |||||||||| | ||||||||| |||||||||||||||||||||    
T  61074 gcacttcaacatgatgatttatgcaatgaccataatgagcatgaagtatt 61025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 187 - 336
Target Start/End: Complemental strand, 18075366 - 18075217
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaatggcctatgagacatttttcagcca 286  Q
    |||||| ||||||||| |||||||||||||| ||||||||||| |||||| | ||||||| | || |||||  ||||| | ||||||||||||||| | |    
T  18075366 gattctagtcggacgagttctttacccatgttctctatcaagttatgtaatgacacatgactatcgtattcaaaatggtcaatgagacatttttcaacta 18075267  T
Q  287 acactccaacatgatgttctatgcaatggccataatgagcatgaagtatt 336  Q
     |||| |||||||||| | ||||||||| |||||||||||||||||||||    
T  18075266 gcacttcaacatgatgatttatgcaatgaccataatgagcatgaagtatt 18075217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13012233 - 13012167
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatgg 67  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  13012233 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatgg 13012167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20129355 - 20129290
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  20129355 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 20129290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 47500818 - 47500753
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  47500818 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 47500753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26439401 - 26439466
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  26439401 tgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 26439466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 34407406 - 34407471
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  34407406 tgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 34407471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25930753 - 25930688
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    |||||||||||||| |||||||| ||||||||||||| ||||||| | ||||||||||||||||||    
T  25930753 tgtgcaaaaattatagatcgagcccgggcgaccgcccagggtcgccatacggtagaaccgcccatg 25930688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36382467 - 36382528
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcc 62  Q
    |||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||||||||    
T  36382467 tgtgcaaaaattatggatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcc 36382528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43355949 - 43355884
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||| ||||| |||||||| ||| |||||||||||||||| ||||||||||||    
T  43355949 tgtgcaaaaattatcgaccgagcccgggcgactgcctggggtcgctacacggtggaaccgcccatg 43355884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30216864 - 30216908
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  30216864 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 30216908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 50205199 - 50205243
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  50205199 tgtgcaaaaattatcgatcgagctcgggcgaccgcccgggatcgc 50205243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 242
Target Start/End: Original strand, 18678084 - 18678191
Alignment:
Q  135 aactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgt 234  Q
    |||||| |||| |||| ||||||||||||| || | | |||||   ||||| |||||||  ||||||| ||||||||||||| |||||| ||||||||||    
T  18678084 aactatgtcattgcgacaccacaacctactacgcttttcaggctctttgggtgattctttccggacgatttctttacccatgacctctagcaagtcatgt 18678183  T
Q  235 aaggtcac 242  Q
    || |||||    
T  18678184 aatgtcac 18678191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43143706 - 43143749
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcg 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  43143706 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcg 43143749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 244
Target Start/End: Original strand, 18730029 - 18730131
Alignment:
Q  142 tcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtca 241  Q
    ||||||||| ||||||||| ||| || | | |||||   ||||| |||||||  ||||||| ||||||||||||| |||||| |||||||||||| ||||    
T  18730029 tcatcgcgacaccacaaccgactacgcttttcaggctctttgggtgattctttccggacgatttctttacccatgacctctagcaagtcatgtaatgtca 18730128  T
Q  242 cat 244  Q
    |||    
T  18730129 cat 18730131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 6690360 - 6690401
Alignment:
Q  4 gcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  6690360 gcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 6690401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29319827 - 29319892
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    |||||||||||||||||||||||  || |||||||| |||||| | | ||||||||||||||||||    
T  29319827 tgtgcaaaaattatcgatcgagcctggacgaccgccaggggtcaccatacggtagaaccgcccatg 29319892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 3293021 - 3293060
Alignment:
Q  4 gcaaaaattatcgatcgagctcgggcgaccgcccggggtc 43  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  3293021 gcaaaaattatcgatcgagcccgggcgaccgcccggggtc 3293060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 242
Target Start/End: Original strand, 18654004 - 18654111
Alignment:
Q  135 aactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgt 234  Q
    |||||| |||| |||| ||||||||||||| || | | |||||   || || |||||||  ||||||| ||||||||||||| |||||| ||||||||||    
T  18654004 aactatgtcattgcgacaccacaacctactacgcttttcaggctgtttaggtgattctttccggacgatttctttacccatgacctctagcaagtcatgt 18654103  T
Q  235 aaggtcac 242  Q
    || |||||    
T  18654104 aatgtcac 18654111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 6235576 - 6235506
Alignment:
Q  2 gtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatggctaaa 72  Q
    ||||||||||||||| |||||| || |||||||||| |  |||| | ||||||||||||||| ||||||||    
T  6235576 gtgcaaaaattatcggtcgagcccgagcgaccgcccagaatcgccatacggtagaaccgcccttggctaaa 6235506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 7769369 - 7769307
Alignment:
Q  5 caaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatgg 67  Q
    ||||||||||||||||||| |||||||||||| ||||||||   |||||  ||||||||||||    
T  7769369 caaaaattatcgatcgagcccgggcgaccgcctggggtcgccggacggtgaaaccgcccatgg 7769307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 18697973 - 18698034
Alignment:
Q  181 ttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcac 242  Q
    ||||| |||||||  ||||||| ||||||||||||| |||||| |||||||||||| |||||    
T  18697973 ttgggtgattctttccggacgatttctttacccatggcctctagcaagtcatgtaatgtcac 18698034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10353006 - 10353050
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    |||||||||||||||||| |||| |||||||||||| ||||||||    
T  10353006 tgtgcaaaaattatcgattgagcccgggcgaccgccaggggtcgc 10353050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 49908782 - 49908818
Alignment:
Q  9 aattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||| |||||||||||||||||||||    
T  49908782 aattatcgatcgagcccgggcgaccgcccggggtcgc 49908818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 6212029 - 6212064
Alignment:
Q  10 attatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||||||||||||||||| ||||||    
T  6212029 attatcgatcgagctcgggcgaccgcccgaggtcgc 6212064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30110001 - 30109958
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcg 44  Q
    ||||||||||||||||||||||  |||||||||| |||||||||    
T  30110001 tgtgcaaaaattatcgatcgagtccgggcgaccgtccggggtcg 30109958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17511356 - 17511417
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgccc 63  Q
    ||||||||||||||||||||||   ||||||||| || ||||||| | |||||||||||||||    
T  17511356 tgtgcaaaaattatcgatcgagtctgggcgaccg-ccagggtcgccatacggtagaaccgccc 17511417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 27363393 - 27363344
Alignment:
Q  14 tcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgccc 63  Q
    |||||||||| |||||||||||||| |||||| | |||||| ||||||||    
T  27363393 tcgatcgagcccgggcgaccgcccgaggtcgccatacggtaaaaccgccc 27363344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 40529060 - 40528996
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgac--cgcccggggtcgctacacggtagaaccgccc 63  Q
    ||||||||||||||||||||||  ||| ||||  ||||| ||||||| | |||||||||||||||    
T  40529060 tgtgcaaaaattatcgatcgagtccggacgacctcgcccagggtcgccatacggtagaaccgccc 40528996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 42333898 - 42333943
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgct 46  Q
    |||||||||||||||||| |||| ||| |||||||||||| |||||    
T  42333898 tgtgcaaaaattatcgattgagcccggacgaccgcccgggatcgct 42333943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 5517494 - 5517530
Alignment:
Q  9 aattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||| | |||||||||||||||||||    
T  5517494 aattatcgatcgagcccaggcgaccgcccggggtcgc 5517530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 187 - 335
Target Start/End: Original strand, 2113 - 2264
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattccc--aatggc-ctatgagacatttttcag 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |  |||||||||||  |||  |  ||||||| ||||||||     
T  2113 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatcgtcatattcccgtaatttctttatgagagatttttcaa 2212  T
Q  284 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtat 335  Q
    |||||||||| | |||||||  |||||||||||||||||||| || ||||||    
T  2213 ccaacactcctagatgatgtgttatgcaatggccataatgagaattaagtat 2264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 187 - 335
Target Start/End: Original strand, 29272412 - 29272563
Alignment:
Q  187 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaat---ggcctatgagacatttttcag 283  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| ||  | |||| |  | ||||||||||||   || |||||||| |||||||||    
T  29272412 gattcttgtcggacgacttctttacccatgtcccctatcaaatcatgcaacattacataatggccatattcccaatattggtctatgagagatttttcag 29272511  T
Q  284 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtat 335  Q
    |||| ||||| | |||||||  |||||||||||||||||||| |||||||||    
T  29272512 ccaatactcctagatgatgtgttatgcaatggccataatgagaatgaagtat 29272563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 39914560 - 39914495
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||    
T  39914560 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgtccatg 39914495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 29728508 - 29728570
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgccc 63  Q
    ||||||||| ||||||||||||| |||||||||| |||||||||| | |||||||||||||||    
T  29728508 tgtgcaaaatttatcgatcgagcacgggcgaccgtccggggtcgccatacggtagaaccgccc 29728570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15838331 - 15838270
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcc 62  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||| | ||||||||||||||    
T  15838331 tgtgcaaaaattatcaatcgagcccgggtgaccgcccggggtcgccatacggtagaaccgcc 15838270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34136947 - 34137014
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatggc 68  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| | |||||  |||| ||||||||    
T  34136947 tgtgcaaaaattatcgatcgagcccgggcgaccgctcggggtcgccagacggtgaaaccacccatggc 34137014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16788147 - 16788188
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggt 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  16788147 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggt 16788188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 4404053 - 4404009
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||    
T  4404053 tgtgcaaaaattatcgatcgagcccgggcgaccgcctggggtcgc 4404009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36408596 - 36408552
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||    
T  36408596 tgtgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgc 36408552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 23402151 - 23402109
Alignment:
Q  3 tgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    |||||| |||||||||||||| |||||||||||||||||||||    
T  23402151 tgcaaagattatcgatcgagcccgggcgaccgcccggggtcgc 23402109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2729318 - 2729362
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||    
T  2729318 tgtgtaaaaattatcgatcgagcccgggcgtccgcccggggtcgc 2729362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3648916 - 3648978
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgccc 63  Q
    |||| |||||||||||||||||| |||||||| | || || |||| | |||||||||||||||    
T  3648916 tgtgaaaaaattatcgatcgagcccgggcgactgtcccggatcgccatacggtagaaccgccc 3648978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 16371630 - 16371764
Alignment:
Q  109 cttaccgtattatctcttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctt 208  Q
    ||||||| ||| |||  |||||| | ||||| ||||| |  |||||| |||||||| ||||| || |||   || || |||||||||||||| | |||||    
T  16371630 cttaccgaattgtcttctaaaacttgaactacatcattgacaaaccataacctactacgttcgcctggctcctttggtgattcttgtcggacaatttctt 16371729  T
Q  209 tacccatgtcctctatcaagtcatgtaaggtcaca 243  Q
    |||||||||| |||| || || |||||| ||||||    
T  16371730 tacccatgtcttctaccaggttatgtaatgtcaca 16371764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 6e-25; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6403926 - 6403992
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatgg 67  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  6403926 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatgg 6403992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41251756 - 41251821
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  41251756 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcactacacggtagaaccgcccatg 41251821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 17445162 - 17445226
Alignment:
Q  2 gtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  17445162 gtgcaaaaattatcgatcgagctcgggcgaccgcccgaggtcgccacacggtagaaccgcccatg 17445226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 42440031 - 42439966
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||    
T  42440031 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcccatg 42439966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 32127263 - 32127329
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatgg 67  Q
    |||||||||||||| |||||||| ||||||||||||||||||||| | ||| |||||||||||||||    
T  32127263 tgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgccatacgctagaaccgcccatgg 32127329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 35962760 - 35962695
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||| | ||||||||||||||||||    
T  35962760 tgtgcaaaaattatcgatcgagcccggacgaccgcctggggtcgccatacggtagaaccgcccatg 35962695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 2958228 - 2958287
Alignment:
Q  7 aaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||| ||| ||||||||||||||||| | ||||||||||||||||||    
T  2958228 aaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcccatg 2958287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 17991739 - 17991822
Alignment:
Q  152 accacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgta 235  Q
    ||||||| ||||| ||||||||||||   || || |||||||| || |||| ||||||||||||||||||||||||||||||||    
T  17991739 accacaatctactccgttctccaggctctttaggtgattcttgccgaacgatttctttacccatgtcctctatcaagtcatgta 17991822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 16405644 - 16405579
Alignment:
Q  2 gtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatgg 67  Q
    ||||||||||||||||| |||| ||||||||||||| ||||| | | | |||||||||||||||||    
T  16405644 gtgcaaaaattatcgattgagcccgggcgaccgcccagggtcaccatatggtagaaccgcccatgg 16405579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18981661 - 18981597
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||| ||||||| ||| ||||||||| ||||||| | ||||||||||||||||||    
T  18981661 tgtgcaaaaattatcaatcgagcccggacgaccgccc-gggtcgccatacggtagaaccgcccatg 18981597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 45418625 - 45418584
Alignment:
Q  4 gcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  45418625 gcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 45418584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8147396 - 8147352
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    |||||||| |||||||||||||| |||||||||||||||||||||    
T  8147396 tgtgcaaagattatcgatcgagcccgggcgaccgcccggggtcgc 8147352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44084725 - 44084769
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||    
T  44084725 tgtgcaaaaattatcgatcgagcccgggcgactgcccggggtcgc 44084769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 771044 - 771005
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggg 40  Q
    ||||||||| ||||||||||||| ||||||||||||||||    
T  771044 tgtgcaaaagttatcgatcgagcccgggcgaccgcccggg 771005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 26237996 - 26237958
Alignment:
Q  7 aaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  26237996 aaaaatatcgatcgagcccgggcgaccgcccggggtcgc 26237958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold1870
Description:

Target: scaffold1870; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 246
Target Start/End: Complemental strand, 451 - 330
Alignment:
Q  125 ttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctat 224  Q
    ||||||| ||||||||||||||  || |||| |||||||| | |||||| |||   || || ||||||||||| ||||||||||||||||||||||||||    
T  451 ttaaaacattaactatatcatcttgacaccataacctacttctttctcctggctctttaggcgattcttgtcgtacgacttctttacccatgtcctctat 352  T
Q  225 caagtcatgtaaggtcacatga 246  Q
     ||||||||||| |||||||||    
T  351 aaagtcatgtaatgtcacatga 330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 270 - 327
Target Start/End: Complemental strand, 291 - 234
Alignment:
Q  270 gagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagca 327  Q
    |||| ||||||||||||||||||| | |||||||| ||||||||||||||||||||||    
T  291 gagagatttttcagccaacactcctagatgatgttttatgcaatggccataatgagca 234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 246
Target Start/End: Complemental strand, 9169 - 9048
Alignment:
Q  125 ttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctat 224  Q
    ||||||| ||||||||||||||  || |||| |||||||| | |||||| |||   || || ||||||||||| ||||||||||||||||||||||||||    
T  9169 ttaaaacattaactatatcatcttgacaccataacctacttctttctcctggctctttaggcgattcttgtcgtacgacttctttacccatgtcctctat 9070  T
Q  225 caagtcatgtaaggtcacatga 246  Q
     ||||||||||| |||||||||    
T  9069 aaagtcatgtaatgtcacatga 9048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 270 - 327
Target Start/End: Complemental strand, 9009 - 8952
Alignment:
Q  270 gagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagca 327  Q
    |||| ||||||||||||||||||| | |||||||| ||||||||||||||||||||||    
T  9009 gagagatttttcagccaacactcctagatgatgttttatgcaatggccataatgagca 8952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 480579 - 480644
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  480579 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 480644  T

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Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 14777229 - 14777294
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  14777229 tgtgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgctacacggtagaaccgcccatg 14777294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 5555532 - 5555467
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||    
T  5555532 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcccatg 5555467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8394170 - 8394109
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcc 62  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||    
T  8394170 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcc 8394109  T

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Target: chr7; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3114218 - 3114284
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatgg 67  Q
    ||||||||||||||||||||||| |||||||||| |||||||| | | |||||||||||||||||||    
T  3114218 tgtgcaaaaattatcgatcgagcccgggcgaccgtccggggtcaccatacggtagaaccgcccatgg 3114284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36630861 - 36630800
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcc 62  Q
    ||||||||||||||||||||||| |||||||||| |||||||||| | ||||||||||||||    
T  36630861 tgtgcaaaaattatcgatcgagcccgggcgaccgtccggggtcgccatacggtagaaccgcc 36630800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34389178 - 34389222
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  34389178 tgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 34389222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 8867855 - 8867897
Alignment:
Q  3 tgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  8867855 tgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 8867897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 10876829 - 10876861
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgacc 33  Q
    ||||||||||||||||||||||| |||||||||    
T  10876829 tgtgcaaaaattatcgatcgagcccgggcgacc 10876861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 33685609 - 33685565
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||||||||||| || ||||| ||| ||||||||    
T  33685609 tgtgcaaaaattatcgatcgagcccgagcgactgcctggggtcgc 33685565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 35090213 - 35090177
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgccc 37  Q
    |||||||||||||| |||||||| |||||||||||||    
T  35090213 tgtgcaaaaattattgatcgagcccgggcgaccgccc 35090177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 37002266 - 37002310
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||||||||||  ||  |||||||||||||||||    
T  37002266 tgtgcaaaaattatcgatcgagaccgaacgaccgcccggggtcgc 37002310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22968566 - 22968631
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  22968566 tgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgctacacggtagaaccgcccatg 22968631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 39771835 - 39771770
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  39771835 tgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 39771770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 6269548 - 6269613
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||||||||  ||| |||||||||||| |||||||||||||||||||||||||    
T  6269548 tgtgcaaaaattatcgatcgagtccggacgaccgcccgggatcgctacacggtagaaccgcccatg 6269613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19390191 - 19390126
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||| ||||||||||||| ||||||    
T  19390191 tgtgcaaaaattatcgatcgaacccggacgaccgcccggggtcgccacacggtagaacctcccatg 19390126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34084244 - 34084305
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcc 62  Q
    ||||||||||||||||||||||  ||||||||||||||||||||| | ||||||||||||||    
T  34084244 tgtgcaaaaattatcgatcgagtccgggcgaccgcccggggtcgccatacggtagaaccgcc 34084305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 45183023 - 45182982
Alignment:
Q  4 gcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  45183023 gcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 45182982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 6503693 - 6503756
Alignment:
Q  3 tgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||| ||||||||||| |||||||||||||||||||||   |||||  |||||||||||    
T  6503693 tgcaaaaataatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 6503756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11018334 - 11018400
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatgg 67  Q
    |||||||||||||||||||||||  |||||||||||||| |||||   |||||  ||||||||||||    
T  11018334 tgtgcaaaaattatcgatcgagcctgggcgaccgcccggagtcgccggacggtgaaaccgcccatgg 11018400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 6931019 - 6931060
Alignment:
Q  4 gcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  6931019 gcaaaaattatcgatcgagcccgggcgaccgtccggggtcgc 6931060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22922202 - 22922141
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcc 62  Q
    ||||||||||| ||||||||||| || ||||||||||||| |||| | ||||| ||||||||    
T  22922202 tgtgcaaaaatgatcgatcgagcccgagcgaccgcccgggatcgccatacggtggaaccgcc 22922141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 33040996 - 33040954
Alignment:
Q  3 tgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||| ||||||| || ||||||||||||||||||    
T  33040996 tgcaaaaattatcaatcgagcccgagcgaccgcccggggtcgc 33040954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27935223 - 27935182
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggt 42  Q
    ||||||||||||||||||||||| |||||||| |||| ||||    
T  27935223 tgtgcaaaaattatcgatcgagcccgggcgactgcccagggt 27935182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 6891035 - 6890999
Alignment:
Q  9 aattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  6891035 aattatcgatcgagcccgggcgaccgcccggtgtcgc 6890999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19565623 - 19565667
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    |||||||||||||||||| || | |||||||||||||||| ||||    
T  19565623 tgtgcaaaaattatcgattgaacccgggcgaccgcccgggatcgc 19565667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 567 - 501
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatgg 67  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||    
T  567 tgtgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgctacacggtggaaccgcccatgg 501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 55; Significance: 1e-22; HSPs: 4)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 235
Target Start/End: Original strand, 3215 - 3325
Alignment:
Q  125 ttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctat 224  Q
    ||||||| ||||||||||||||   | |||| || ||||| | ||||||||||   ||||| |||||||||||||||||||||||||||||||||| |||    
T  3215 ttaaaacattaactatatcatcttcacaccataatctacttctttctccaggctctttgggcgattcttgtcggacgacttctttacccatgtcctttat 3314  T
Q  225 caagtcatgta 235  Q
    |||||||||||    
T  3315 caagtcatgta 3325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 235
Target Start/End: Original strand, 12178 - 12288
Alignment:
Q  125 ttaaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctat 224  Q
    ||||||| ||||||||||||||   | |||| || ||||| | ||||||||||   ||||| |||||||||||||||||||||||||||||||||| |||    
T  12178 ttaaaacattaactatatcatcttcacaccataatctacttctttctccaggctctttgggcgattcttgtcggacgacttctttacccatgtcctttat 12277  T
Q  225 caagtcatgta 235  Q
    |||||||||||    
T  12278 caagtcatgta 12288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 335
Target Start/End: Original strand, 3372 - 3437
Alignment:
Q  270 gagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtat 335  Q
    |||| ||||||||||||||||| | | |||||||  ||||| |||||||||||||||| |||||||    
T  3372 gagagatttttcagccaacactactagatgatgtgttatgcgatggccataatgagcacgaagtat 3437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 335
Target Start/End: Original strand, 12335 - 12400
Alignment:
Q  270 gagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtat 335  Q
    |||| ||||||||||||||||| | | |||||||  ||||| |||||||||||||||| |||||||    
T  12335 gagagatttttcagccaacactactagatgatgtgttatgcgatggccataatgagcacgaagtat 12400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 6e-22; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26283440 - 26283505
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||    
T  26283440 tgtgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgctacacggtggaaccgcccatg 26283505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 39434741 - 39434676
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    |||| |||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||    
T  39434741 tgtgaaaaaattatcgatcgagcccgggcgaccgcccagggtcgccacacggtagaaccgcccatg 39434676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 13818022 - 13817960
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgccc 63  Q
    ||||||||||||||||||||||| || |||||||||||||||||| | |||||||||||||||    
T  13818022 tgtgcaaaaattatcgatcgagcccgagcgaccgcccggggtcgccatacggtagaaccgccc 13817960  T

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Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 10033972 - 10033905
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatggc 68  Q
    ||||||||||||||||||||||| ||||||| || |||||||||| | ||||||||||||||| ||||    
T  10033972 tgtgcaaaaattatcgatcgagcccgggcgatcgtccggggtcgccatacggtagaaccgcccctggc 10033905  T

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Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 244
Target Start/End: Complemental strand, 16692530 - 16692412
Alignment:
Q  126 taaaacgttaactatatcatcgcgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatc 225  Q
    |||||| | ||||||||| ||| |||||||||||||||||||||  |||||    || || ||||||| |||||| | |||||||||||||||||| |||    
T  16692530 taaaacttgaactatatcttcgtgaaaccacaacctactgcgtttaccaggatgttttggggattcttttcggacaatttctttacccatgtcctcaatc 16692431  T
Q  226 aagtcatgtaaggtcacat 244  Q
    |||| ||| || |||||||    
T  16692430 aagtgatgcaatgtcacat 16692412  T

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Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 36293747 - 36293809
Alignment:
Q  5 caaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatgg 67  Q
    ||||||||||||||||||  ||| ||||||| ||||||||| |||||||||||||||||||||    
T  36293747 caaaaattatcgatcgagtccggacgaccgctcggggtcgccacacggtagaaccgcccatgg 36293809  T

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Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 1776502 - 1776559
Alignment:
Q  5 caaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcc 62  Q
    ||||||||||||||||||| ||||||||||||||||||||  | ||||||||||||||    
T  1776502 caaaaattatcgatcgagcccgggcgaccgcccggggtcgtcatacggtagaaccgcc 1776559  T

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Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3155753 - 3155818
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatg 66  Q
    |||||||||||||| |||||||| || ||||||||||||| |||| | ||| ||||||||||||||    
T  3155753 tgtgcaaaaattattgatcgagcccgagcgaccgcccgggatcgccatacgatagaaccgcccatg 3155818  T

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Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19985984 - 19985941
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcg 44  Q
    ||||||||||||||||||||||||||| |||||||||| |||||    
T  19985984 tgtgcaaaaattatcgatcgagctcggacgaccgcccgaggtcg 19985941  T

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Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 31680407 - 31680368
Alignment:
Q  6 aaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  31680407 aaaaattatcgatcgagcccgggcgaccgcccggggtcgc 31680368  T

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Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 17332675 - 17332717
Alignment:
Q  3 tgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||||||||| ||||||| |||||||||||||    
T  17332675 tgcaaaaattatcgatcgagcccgggcgaacgcccggggtcgc 17332717  T

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Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12278982 - 12279026
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||    
T  12278982 tgtgcaaaaattatcgatcgagtccgggcgaccgcccgggatcgc 12279026  T

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Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31501838 - 31501882
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||    
T  31501838 tgtgcaaaaattatcgatcgagcccgggcaatcgcccggggtcgc 31501882  T

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Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37254686 - 37254642
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||    
T  37254686 tgtgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgc 37254642  T

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Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 14316694 - 14316641
Alignment:
Q  10 attatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgccc 63  Q
    ||||||||||||||  ||||||||||||| | |||| | |||||||||||||||    
T  14316694 attatcgatcgagcctgggcgaccgcccgagatcgccatacggtagaaccgccc 14316641  T

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Target: scaffold0069 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17887 - 17821
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgctacacggtagaaccgcccatgg 67  Q
    ||||||||||||||||||||||| ||| ||| ||| ||||||||| |||||||||||||||||||||    
T  17887 tgtgcaaaaattatcgatcgagcccggacgatcgctcggggtcgccacacggtagaaccgcccatgg 17821  T

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Target: scaffold0502 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5275 - 5231
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    |||||||||||||| |||||||| |||||||||||||||||||||    
T  5275 tgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgc 5231  T

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Target: scaffold0154 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31525 - 31481
Alignment:
Q  1 tgtgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgc 45  Q
    ||||||||||||||||||||||| |||||||||| | ||||||||    
T  31525 tgtgcaaaaattatcgatcgagcccgggcgaccgtctggggtcgc 31481  T

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