View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13061_high_78 (Length: 241)
Name: NF13061_high_78
Description: NF13061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13061_high_78 |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 29586465 - 29586240
Alignment:
| Q |
1 |
cgcttagctgccaaggcaaaccaattgtcggacaaaattattaaacatagataatatattttgatatattattgtttcggtcatgaaatcacgtagtctg |
100 |
Q |
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| T |
29586465 |
cgcttagctgccaaggcaaaccaattgtcggacaaaattattaaacatagataatatattttgatatattattgtttcggtcatgaaatcacgtagtctg |
29586366 |
T |
|
| Q |
101 |
tgcataggctcttgaaaatggtatttgtctttgcacatagtcatgatggaatttcttgccagctcatcccaactagaagaatatgctgcttagattccca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
29586365 |
tgcataggctcttgaaaatggtatttgtctttgcacatagtcatgatggaatttcttggcagctcatcccaactagaagaatatgctgcttagattccca |
29586266 |
T |
|
| Q |
201 |
tccattgtgcat-acaacctacattt |
225 |
Q |
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|||||||||||| ||||||||||||| |
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| T |
29586265 |
tccattgtgcataacaacctacattt |
29586240 |
T |
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