View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13061_high_84 (Length: 207)
Name: NF13061_high_84
Description: NF13061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13061_high_84 |
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Alignment Details
Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 8087679 - 8087501
Alignment:
| Q |
19 |
tatttgaataaaagctagaaaattgaagcataaaaccacgataattcaacaaactagaatacccaaatnnnnnnntgacaactttaggatttaagaaagc |
118 |
Q |
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| T |
8087679 |
tatttgaataaaagctagaaaattgaagcataaaaccacgataattcaacaaactagaatacccaaataaaaaaatgacaactttagggtttaagaaagc |
8087580 |
T |
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| Q |
119 |
ataaaccaatgaaattgagattgaaaattgaagaatgtaaagggattgttgtgtatgtatacctaatgcctatgctact |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
8087579 |
ataaaccaatgaaattgagattgaaaattgaagaatgtaaagggattgttgtgtatgtatacctaatgcctctgctact |
8087501 |
T |
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