View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13061_low_2 (Length: 951)
Name: NF13061_low_2
Description: NF13061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13061_low_2 |
 | |
|
| [»] scaffold0345 (1 HSPs) |
| | |
|
| [»] scaffold0105 (5 HSPs) |
| | |
|
| [»] scaffold1330 (1 HSPs) |
| | |
|
| [»] scaffold0496 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 851; Significance: 0; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 851; E-Value: 0
Query Start/End: Original strand, 16 - 942
Target Start/End: Original strand, 7457485 - 7458411
Alignment:
| Q |
16 |
catcagctacgatgaaaattgggcatagaagaacatcgggtttacttctcttgtgatctacttaaatgggaggcatttgatccaaatcgtggtcgattta |
115 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
7457485 |
catcagctacgacgaaaattgggcatagaagaacattgggtttacttctcttgtgatttacttaaatgggaggcatttgatccaagtcgtggtcgattta |
7457584 |
T |
|
| Q |
116 |
ttcaattgcctaaaattccttgtgataaagtttttatgttgtgtgataaggagtcgctggctgtcggtactgagcttctagtttttggaagggaattgat |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7457585 |
ttcaattgcctaaaattccttgtgataaagtttttatgttgtgtgataaggagtcgttggctgtcggtactgagcttctagtttttggaagggaattgat |
7457684 |
T |
|
| Q |
216 |
gggtcctaccattcataagtatgactatctatcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttgga |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7457685 |
gggtcctaccattcataagtatgactatctatcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttgga |
7457784 |
T |
|
| Q |
316 |
gaaattgcaatattagcaggtgggtgtgatccatgtggcaacatcttgagctcagctgagctttacaactcagacactggaaaatgagaaacccttccag |
415 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
7457785 |
gaaattgcaatattagcaggtggttgtgatccatgtggcaacatcttgagctcagctgagatttacaactcagacactggaaaatgggaaacccttccaa |
7457884 |
T |
|
| Q |
416 |
acatgaataaagcaagaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatg |
515 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7457885 |
acatgaataaagcaagaaaaatgtgttcgggtgtatttatggatgaaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatg |
7457984 |
T |
|
| Q |
516 |
tggtgaggaatttgatataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggacca |
615 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7457985 |
tggtgaggaatttgatataaagagaaaagaatggcgtgaaatacccaacatgttcccaatgccaactggagtattggaggcaccaccatcttatggacca |
7458084 |
T |
|
| Q |
616 |
cctcctttgattgcagttgtaaaaaatgtattgtataatgctgattacgcaacaaaggaagtaaaaaagtataataaaaacaataactcttgggttacca |
715 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
7458085 |
cctcccttgattgcagttgtaaaaaatgtattgtataatgctgattacgcaacaaaggaagtaaagaagtatgataaaaacaataactcttgggttacca |
7458184 |
T |
|
| Q |
716 |
ttggaagatttcctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttca |
815 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
7458185 |
ttggaagatttcctgagcaagccacctcaatgaaaggttggggattagcttttcgtgcatgtggagatatgctaatttttcttggaggtcccattcttca |
7458284 |
T |
|
| Q |
816 |
ttgtagaggcatgttggaaatcaatgcttgggtcccaaatgaaagagcgatacaatggaatcaacttgcgagaaagaaaatagggagctttgtgtatagt |
915 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
7458285 |
ttgtagaggcatgttggaaatcaatgcttgggtcccaaatgaaagagcgatacaatggaatcaacttgcaagaaagaaaatagggagctttgtgtatagt |
7458384 |
T |
|
| Q |
916 |
tgcattgtgatgggatgttgatgatgt |
942 |
Q |
| |
|
|||| |||||||||||||||||||||| |
|
|
| T |
7458385 |
tgcactgtgatgggatgttgatgatgt |
7458411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 608; E-Value: 0
Query Start/End: Original strand, 36 - 942
Target Start/End: Original strand, 7411426 - 7412333
Alignment:
| Q |
36 |
gggcatagaagaacatcgggtttacttctcttgtgatctacttaaatgggaggcatttgatccaaatcgtggtcgatttattcaattgcctaaaattcct |
135 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||| ||| ||| | |||||||| ||||||||||||||| ||||| || || ||||||| ||| || |
|
|
| T |
7411426 |
gggcatagtagaacattgggtttacttctcttctgaagcccttgagtgggaggcttttgatccaaatcgtaatcgatggatgcatttgcctataatgact |
7411525 |
T |
|
| Q |
136 |
tgtgataaagtttttatgttgtgtgataaggagtcgctggctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagt |
235 |
Q |
| |
|
|||||| || ||||| ||||| |||| ||| || ||||||| ||||||||||||||||| ||||||| |||||| |||| ||||| ||||||||||| |
|
|
| T |
7411526 |
tgtgatcaatgttttacgttgtcagatagggaatcattggctgttggtactgagcttctagtctttggaaaggaattaatggctcctatcattcataagt |
7411625 |
T |
|
| Q |
236 |
atgactatctatcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcagg |
335 |
Q |
| |
|
|| ||| ||| |||||| ||||||| ||||||||||| |||||||||||||||||| ||| ||||| | || |||||||||||||||||| |||| || |
|
|
| T |
7411626 |
ataactttctgacaaatatgtggtcagttggaaaaatgatgaatactccaagatgcttgtttggttcggctagtcttggagaaattgcaatactagctgg |
7411725 |
T |
|
| Q |
336 |
tgggtgtgatccatgtggcaacatcttgagctcagctgagctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagcaagaaaa |
435 |
Q |
| |
|
||| ||||||||| |||||| ||| |||||||| |||||||| || ||| |||| |||||||| || |||||||||||| |||||||||||||||||||| |
|
|
| T |
7411726 |
tggttgtgatccacgtggcagcatattgagctctgctgagctctataacgcagatactggaaattgggaaacccttccaaacatgaataaagcaagaaaa |
7411825 |
T |
|
| Q |
436 |
atgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataa |
535 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7411826 |
atgtgttggggtgtatttatggatgaaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataa |
7411925 |
T |
|
| Q |
536 |
agagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgcagttgt |
635 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
7411926 |
agagaaaagaatggcgtgaaatacccaacatgttcccaatgccaactggagtattggaggcaccaccatcttatggaccacctcccttgattgcagttgt |
7412025 |
T |
|
| Q |
636 |
aaaaaatgtattgtataatgctgattacgcaacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcctgagcaa |
735 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7412026 |
aaaaaatgtattgtataatgctgattacgcaacaaaggaagtaaagaagtatgataaaaacaataactcttgggttaccattggaagatttcctgagcaa |
7412125 |
T |
|
| Q |
736 |
gccacttcaatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttcattgtagaggcatgttggaaa |
835 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7412126 |
gccacctcaatgaaaggttggggattagcttttcgtgcatgtggagatatgctaatttttcttggaggtcccattcttcattgtagaggcatgttggaaa |
7412225 |
T |
|
| Q |
836 |
tcaatgcttgggtcccaaatgaaagagcgatacaatggaatcaacttgcgagaaagaaaatagggagctttgtgtatagttgcattgtgatgggatg-tt |
934 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| || |
|
|
| T |
7412226 |
tcaatgcttgggtcccaaatgaaagagcgatacaatggaatcaacttgcaagaaagaaaatagggagctttgtgtatagttgcactgtgatgggatgttt |
7412325 |
T |
|
| Q |
935 |
gatgatgt |
942 |
Q |
| |
|
|||||||| |
|
|
| T |
7412326 |
gatgatgt |
7412333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 29 - 531
Target Start/End: Original strand, 44919554 - 44920056
Alignment:
| Q |
29 |
gaaaattgggcatagaagaacatcgggtttacttctcttgtgatctacttaaatgggaggcatttgatccaaatcgtggtcgatttattcaattgcctaa |
128 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||| ||||||||| | |||||||||||||| | |||||||||||||| ||| || || ||| |||| || |
|
|
| T |
44919554 |
gaaaaatgggcatagtggaacattgggtttacttttcttgtgatgtccttaaatgggaggcctatgatccaaatcgtgatcggttgatgcaactgccgaa |
44919653 |
T |
|
| Q |
129 |
aattccttgtgataaagtttttatgttgtgtgataaggagtcgctggctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccatt |
228 |
Q |
| |
|
||| || | ||| | ||||||| | | || |||||||| || ||||| ||||| |||||||| ||||||||||| ||| | | || | | |||| |
|
|
| T |
44919654 |
aatgagttctaatatatgttttatgctttcagacaaggagtcactagctgttggtacggagcttcttgtttttggaagagaaataactggccttgccata |
44919753 |
T |
|
| Q |
229 |
cataagtatgactatctatcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatat |
328 |
Q |
| |
|
|||||||| | ||| ||||| | |||| | |||| | |||||||||| ||||||| ||| ||||| ||||||| |||||||||||||||| |
|
|
| T |
44919754 |
tataagtatagcattctgacaaattcatggttgaagggaatgaaaatgaatactcctagatgcttgtttggttctgccagcctcggagaaattgcaatat |
44919853 |
T |
|
| Q |
329 |
tagcaggtgggtgtgatccatgtggcaacatcttgagctcagctgagctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagc |
428 |
Q |
| |
|
|||| ||||| ||||||| | ||||||||| |||||||| |||||||||| |||||||| || || | ||| || |||||||||||||| | | |
|
|
| T |
44919854 |
tagccggtggttgtgatcaacatggcaacatattgagctcttctgagctttataactcagataccggcacatgggaggttcttccagacatgaacacgcc |
44919953 |
T |
|
| Q |
429 |
aagaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaattt |
528 |
Q |
| |
|
||| | ||||||||| | || |||||||||| |||||||||||||||||| ||| |||||| ||| |||||||||| ||| || |||||||| || ||| |
|
|
| T |
44919954 |
aaggagaatgtgttcagccgtgtttatggatgaaaaattttatgtccttggcggagttggagttgacaaaacaacacaactaacttgtggtgaagagttt |
44920053 |
T |
|
| Q |
529 |
gat |
531 |
Q |
| |
|
||| |
|
|
| T |
44920054 |
gat |
44920056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 871 - 938
Target Start/End: Original strand, 13031387 - 13031454
Alignment:
| Q |
871 |
tggaatcaacttgcgagaaagaaaatagggagctttgtgtatagttgcattgtgatgggatgttgatg |
938 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||| ||| |||| |||||||||||||||||| |
|
|
| T |
13031387 |
tggaatcaacttgcgagaaagcaatcagggagctttgtgcataactgcactgtgatgggatgttgatg |
13031454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 867 - 938
Target Start/End: Complemental strand, 7419439 - 7419368
Alignment:
| Q |
867 |
acaatggaatcaacttgcgagaaagaaaatagggagctttgtgtatagttgcattgtgatgggatgttgatg |
938 |
Q |
| |
|
|||||||||||| |||||||||||| || ||||||||||||| ||| |||| ||||||||||| |||||| |
|
|
| T |
7419439 |
acaatggaatcagcttgcgagaaagcaatcagggagctttgtgcataactgcactgtgatgggatattgatg |
7419368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0345 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: scaffold0345
Description:
Target: scaffold0345; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 36 - 938
Target Start/End: Complemental strand, 4222 - 3320
Alignment:
| Q |
36 |
gggcatagaagaacatcgggtttacttctcttgtgatctacttaaatgggaggcatttgatccaaatcgtggtcgatttattcaattgcctaaaattcct |
135 |
Q |
| |
|
|||||||| ||||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||| ||||| || || ||||| ||||| || |
|
|
| T |
4222 |
gggcatagtagaacattgggtgtacttctcttctgaagcccttaaatgggaggcttttgatccaaatcgtaatcgatggatacatttgccaaaaatgact |
4123 |
T |
|
| Q |
136 |
tgtgataaagtttttatgttgtgtgataaggagtcgctggctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagt |
235 |
Q |
| |
|
|||||| | |||| | || |||| ||| ||| ||||||| ||||||||||||||||| ||||||| |||||| |||| ||||| ||||||||||| |
|
|
| T |
4122 |
tgtgatgcatgtttttcgctggcagatagggaatcgttggctgttggtactgagcttctagtctttggaaaggaattaatggatcctatcattcataagt |
4023 |
T |
|
| Q |
236 |
atgactatctatcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcagg |
335 |
Q |
| |
|
|| | ||| |||||| ||||||| ||||||| ||| |||||||||| ||||||| ||| ||||| | || |||||||||||||||||| |||| || |
|
|
| T |
4022 |
atagccttctgacaaatatgtggtcagttggaaatatgatgaatactccgagatgcttgtttggttcggctagtcttggagaaattgcaatactagccgg |
3923 |
T |
|
| Q |
336 |
tgggtgtgatccatgtggcaacatcttgagctcagctgagctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagcaagaaaa |
435 |
Q |
| |
|
||| |||||||||||||||||||| |||||||| |||||||| || ||| ||||||||||||| || | ||||||||| |||||||||||||||||||| |
|
|
| T |
3922 |
tggttgtgatccatgtggcaacatattgagctctgctgagctctataacgcagacactggaaattggaagacccttccaaacatgaataaagcaagaaaa |
3823 |
T |
|
| Q |
436 |
atgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataa |
535 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| ||||||||||| ||||| |||||||| | |
|
|
| T |
3822 |
atgtgttcaagtgtattcatggatggaaaattttatgtccttggtgggatagcagctgacaaaaaaacacagcttacatgtggggaggagtttgatatga |
3723 |
T |
|
| Q |
536 |
agagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgcagttgt |
635 |
Q |
| |
|
||| |||| |||||||||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| |||||||||||||||||||||| |
|
|
| T |
3722 |
agacaaaaaaatggcgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacctcctttgattgcagttgt |
3623 |
T |
|
| Q |
636 |
aaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcctgagc |
733 |
Q |
| |
|
|||||||||||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||||||||| ||||| |||| |
|
|
| T |
3622 |
aaaaaatgtattgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcattggaagctttcccgagc |
3525 |
T |
|
| Q |
734 |
aagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttcattgtagaggcatgttgga |
833 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||||||||| ||||| |||||| ||| | ||||| |||||||| || ||||| || | ||| |||| |
|
|
| T |
3524 |
aagctacttcgatgaatggttggggattagcctttcgagcatgcggagatcatctattatttcttggaggtcctgttattcatggtgcaataatgatgga |
3425 |
T |
|
| Q |
834 |
aatcaatgcttgggtcccaaatgaaagagcgatacaatggaatcaacttgcgagaaagaaaatagggagctttgtgtatagttgcattgtgatgggatgt |
933 |
Q |
| |
|
||||||||||||| ||||||||||| ||| | ||||||||||| ||||| |||| || |||| | |||||| ||| ||| | ||||||||||||| |
|
|
| T |
3424 |
aatcaatgcttggatcccaaatgaaggagagccacaatggaatcggcttgcaggaaatcaatcagggggttttgtgcataattgtactgtgatgggatgt |
3325 |
T |
|
| Q |
934 |
tgatg |
938 |
Q |
| |
|
||||| |
|
|
| T |
3324 |
tgatg |
3320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105 (Bit Score: 303; Significance: 1e-170; HSPs: 5)
Name: scaffold0105
Description:
Target: scaffold0105; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 36 - 938
Target Start/End: Original strand, 34757 - 35659
Alignment:
| Q |
36 |
gggcatagaagaacatcgggtttacttctcttgtgatctacttaaatgggaggcatttgatccaaatcgtggtcgatttattcaattgcctaaaattcct |
135 |
Q |
| |
|
|||||||| ||||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||| ||||| || || ||||| ||||| || |
|
|
| T |
34757 |
gggcatagtagaacattgggtgtacttctcttctgaagcccttaaatgggaggcttttgatccaaatcgtaatcgatggatacatttgccaaaaatgact |
34856 |
T |
|
| Q |
136 |
tgtgataaagtttttatgttgtgtgataaggagtcgctggctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagt |
235 |
Q |
| |
|
|||||| | |||| | || |||| ||| ||| ||||||| ||||||||||||||||| ||||||| |||||| |||| ||||| ||||||||||| |
|
|
| T |
34857 |
tgtgatgcatgtttttcgctggcagatagggaatcgttggctgttggtactgagcttctagtctttggaaaggaattaatggatcctatcattcataagt |
34956 |
T |
|
| Q |
236 |
atgactatctatcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcagg |
335 |
Q |
| |
|
|| | ||| |||||| ||||||| ||||||| ||| |||||||||| ||||||| ||| ||||| | || |||||||||||||||||| |||| || |
|
|
| T |
34957 |
atagccttctgacaaatatgtggtcagttggaaatatgatgaatactccgagatgcttgtttggttcggctagtcttggagaaattgcaatactagccgg |
35056 |
T |
|
| Q |
336 |
tgggtgtgatccatgtggcaacatcttgagctcagctgagctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagcaagaaaa |
435 |
Q |
| |
|
||| |||||||||||||||||||| |||||||| |||||||| || ||| ||||||||||||| || | ||||||||| |||||||||||||||||||| |
|
|
| T |
35057 |
tggttgtgatccatgtggcaacatattgagctctgctgagctctataacgcagacactggaaattggaagacccttccaaacatgaataaagcaagaaaa |
35156 |
T |
|
| Q |
436 |
atgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataa |
535 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| ||||||||||| ||||| |||||||| | |
|
|
| T |
35157 |
atgtgttcaagtgtattcatggatggaaaattttatgtccttggtgggatagcagctgacaaaaaaacacagcttacatgtggggaggagtttgatatga |
35256 |
T |
|
| Q |
536 |
agagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgcagttgt |
635 |
Q |
| |
|
||| |||| ||||| |||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| |||||||||||||||||||||| |
|
|
| T |
35257 |
agacaaaaaaatggtgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacctcctttgattgcagttgt |
35356 |
T |
|
| Q |
636 |
aaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcctgagc |
733 |
Q |
| |
|
|||||||||||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||||||||| ||||| |||| |
|
|
| T |
35357 |
aaaaaatgtattgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcattggaagctttcccgagc |
35454 |
T |
|
| Q |
734 |
aagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttcattgtagaggcatgttgga |
833 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||||||||| ||||| |||||| ||| | ||||| |||||||| || ||||| || || ||| |||| |
|
|
| T |
35455 |
aagctacttcgatgaatggttggggattagcctttcgagcatgcggagatcatctattatttcttggaggtcctgttattcatggtggaataatgatgga |
35554 |
T |
|
| Q |
834 |
aatcaatgcttgggtcccaaatgaaagagcgatacaatggaatcaacttgcgagaaagaaaatagggagctttgtgtatagttgcattgtgatgggatgt |
933 |
Q |
| |
|
||||||||||||| ||||||||||| ||| | ||||||||||| ||||| |||| || |||| | |||||| ||| ||| | ||||||||||||| |
|
|
| T |
35555 |
aatcaatgcttggatcccaaatgaaggagagccacaatggaatcggcttgcaggaaatcaatcagggggttttgtgcataattgtactgtgatgggatgt |
35654 |
T |
|
| Q |
934 |
tgatg |
938 |
Q |
| |
|
||||| |
|
|
| T |
35655 |
tgatg |
35659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105; HSP #2
Raw Score: 299; E-Value: 1e-167
Query Start/End: Original strand, 36 - 938
Target Start/End: Complemental strand, 10417 - 9515
Alignment:
| Q |
36 |
gggcatagaagaacatcgggtttacttctcttgtgatctacttaaatgggaggcatttgatccaaatcgtggtcgatttattcaattgcctaaaattcct |
135 |
Q |
| |
|
|||||||| ||||||| ||| |||||||||| ||| |||||||||||||| ||||||||||||||| ||||| || || ||||| ||||| || |
|
|
| T |
10417 |
gggcatagtagaacattgggcgtacttctcttctgaagcccttaaatgggaggcttttgatccaaatcgtaatcgatggatacatttgccaaaaatgact |
10318 |
T |
|
| Q |
136 |
tgtgataaagtttttatgttgtgtgataaggagtcgctggctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagt |
235 |
Q |
| |
|
|||||| | |||| | || |||| ||| ||| ||||||| ||||||||||||||||| ||||||| |||||| |||| ||||| ||||||||||| |
|
|
| T |
10317 |
tgtgatgcatgtttttcgctggcagatagggaatcgttggctgttggtactgagcttctagtctttggaaaggaattaatggatcctatcattcataagt |
10218 |
T |
|
| Q |
236 |
atgactatctatcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcagg |
335 |
Q |
| |
|
|| | ||| |||||| ||||||| ||||||| ||| |||||||||| ||||||| ||| ||||| | || |||||||||||||||||| |||| || |
|
|
| T |
10217 |
atagccttctgacaaatatgtggtcagttggaaatatgatgaatactccgagatgcttgtttggttcggctagtcttggagaaattgcaatactagccgg |
10118 |
T |
|
| Q |
336 |
tgggtgtgatccatgtggcaacatcttgagctcagctgagctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagcaagaaaa |
435 |
Q |
| |
|
||| |||||||||||||||||||| |||||||| |||||||| || ||| ||||||||||||| || | ||||||||| |||||||||||||||||||| |
|
|
| T |
10117 |
tggttgtgatccatgtggcaacatattgagctctgctgagctctataacgcagacactggaaattggaagacccttccaaacatgaataaagcaagaaaa |
10018 |
T |
|
| Q |
436 |
atgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataa |
535 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| ||||||||||| ||||| |||||||| | |
|
|
| T |
10017 |
atgtgttcaagtgtattcatggatggaaaattttatgtccttggtgggatagcagctgacaaaaaaacacagcttacatgtggggaggagtttgatatga |
9918 |
T |
|
| Q |
536 |
agagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgcagttgt |
635 |
Q |
| |
|
||| |||| |||||||||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| |||||||||||||||||||||| |
|
|
| T |
9917 |
agacaaaaaaatggcgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacctcctttgattgcagttgt |
9818 |
T |
|
| Q |
636 |
aaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcctgagc |
733 |
Q |
| |
|
|||||||||||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||||||||| ||||| |||| |
|
|
| T |
9817 |
aaaaaatgtattgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcattggaagctttcccgagc |
9720 |
T |
|
| Q |
734 |
aagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttcattgtagaggcatgttgga |
833 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||||||||| ||||| |||||| ||| | ||||| |||||||| || ||||| || | ||| |||| |
|
|
| T |
9719 |
aagctacttcgatgaatggttggggattagcctttcgagcatgcggagatcatctattatttcttggaggtcctgttattcatggtgcaataatgatgga |
9620 |
T |
|
| Q |
834 |
aatcaatgcttgggtcccaaatgaaagagcgatacaatggaatcaacttgcgagaaagaaaatagggagctttgtgtatagttgcattgtgatgggatgt |
933 |
Q |
| |
|
||||||||||||| ||||||||||| ||| | ||||||||||| ||||| |||| || |||| | |||||| ||| ||| | ||||||||||||| |
|
|
| T |
9619 |
aatcaatgcttggatcccaaatgaaggagagccacaatggaatcggcttgcaggaaatcaatcagggggttttgtgcataattgtactgtgatgggatgt |
9520 |
T |
|
| Q |
934 |
tgatg |
938 |
Q |
| |
|
||||| |
|
|
| T |
9519 |
tgatg |
9515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105; HSP #3
Raw Score: 299; E-Value: 1e-167
Query Start/End: Original strand, 36 - 938
Target Start/End: Original strand, 48357 - 49259
Alignment:
| Q |
36 |
gggcatagaagaacatcgggtttacttctcttgtgatctacttaaatgggaggcatttgatccaaatcgtggtcgatttattcaattgcctaaaattcct |
135 |
Q |
| |
|
|||||||| ||||||| ||| |||||||||| ||| |||||||||||||| ||||||||||||||| ||||| || || ||||| ||||| || |
|
|
| T |
48357 |
gggcatagtagaacattgggcgtacttctcttctgaagcccttaaatgggaggcttttgatccaaatcgtaatcgatggatacatttgccaaaaatgact |
48456 |
T |
|
| Q |
136 |
tgtgataaagtttttatgttgtgtgataaggagtcgctggctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagt |
235 |
Q |
| |
|
|||||| | |||| | || |||| ||| ||| ||||||| ||||||||||||||||| ||||||| |||| | |||| ||||| ||||||||||| |
|
|
| T |
48457 |
tgtgatgcatgtttttcgctggcagatagggaatcgttggctgttggtactgagcttctagtctttggaaaggaactaatggatcctatcattcataagt |
48556 |
T |
|
| Q |
236 |
atgactatctatcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcagg |
335 |
Q |
| |
|
|| | ||| |||||| ||||||| ||||||| ||| |||||||||| ||||||| ||| ||||| | || |||||||||||||||||| |||| || |
|
|
| T |
48557 |
atagccttctgacaaatatgtggtcagttggaaatatgatgaatactccgagatgcttgtttggttcggctagtcttggagaaattgcaatactagccgg |
48656 |
T |
|
| Q |
336 |
tgggtgtgatccatgtggcaacatcttgagctcagctgagctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagcaagaaaa |
435 |
Q |
| |
|
||| |||||||||||||||||||| |||||||| |||||||| || ||| ||||||||||||| || | ||||||||| |||||||||||||||||||| |
|
|
| T |
48657 |
tggttgtgatccatgtggcaacatattgagctcggctgagctctataacgcagacactggaaattggaagacccttccaaacatgaataaagcaagaaaa |
48756 |
T |
|
| Q |
436 |
atgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataa |
535 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| ||||||||||| ||||| |||||||| | |
|
|
| T |
48757 |
atgtgttcaagtgtattcatggatggaaaattttatgtccttggtgggatagcagctgaaaaaaaaacacagcttacatgtggggaggagtttgatatga |
48856 |
T |
|
| Q |
536 |
agagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgcagttgt |
635 |
Q |
| |
|
||| |||| |||||||||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| |||||||||||||||||||||| |
|
|
| T |
48857 |
agacaaaaaaatggcgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacctcctttgattgcagttgt |
48956 |
T |
|
| Q |
636 |
aaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcctgagc |
733 |
Q |
| |
|
|||||||||||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||||||||| ||||| |||| |
|
|
| T |
48957 |
aaaaaatgtattgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcattggaagctttcccgagc |
49054 |
T |
|
| Q |
734 |
aagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttcattgtagaggcatgttgga |
833 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||||||||| ||||| |||||| ||| | ||||| |||||||| || ||||| || || ||| |||| |
|
|
| T |
49055 |
aagctacttcgatgaatggttggggattagcctttcgagcatgcggagatcatctattatttcttggaggtcctgttattcatggtggaataatgatgga |
49154 |
T |
|
| Q |
834 |
aatcaatgcttgggtcccaaatgaaagagcgatacaatggaatcaacttgcgagaaagaaaatagggagctttgtgtatagttgcattgtgatgggatgt |
933 |
Q |
| |
|
||||||||||||| ||||||||||| ||| | ||||||||||| ||||| |||| || |||| | |||||| ||| ||| | ||||||||||||| |
|
|
| T |
49155 |
aatcaatgcttggatcccaaatgaaggagagccacaatggaatcggcttgcaggaaatcaatcagggggttttgtgcataattgtactgtgatgggatgt |
49254 |
T |
|
| Q |
934 |
tgatg |
938 |
Q |
| |
|
||||| |
|
|
| T |
49255 |
tgatg |
49259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105; HSP #4
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 36 - 938
Target Start/End: Complemental strand, 4335 - 3433
Alignment:
| Q |
36 |
gggcatagaagaacatcgggtttacttctcttgtgatctacttaaatgggaggcatttgatccaaatcgtggtcgatttattcaattgcctaaaattcct |
135 |
Q |
| |
|
|||||||| ||||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||| ||||| || || || || ||||| || |
|
|
| T |
4335 |
gggcatagtagaacattgggtgtacttctcttctgaagcccttaaatgggaggcttttgatccaaatcgtaatcgatggatacattttccaaaaatgact |
4236 |
T |
|
| Q |
136 |
tgtgataaagtttttatgttgtgtgataaggagtcgctggctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagt |
235 |
Q |
| |
|
|||||| | |||| | || |||| ||| || | ||||| ||||||||||||||||| ||||||| |||||| |||| ||||| ||||||||||| |
|
|
| T |
4235 |
tgtgatgcatgtttttcgctggcggatagggaatcatttgctgttggtactgagcttctagtctttggaaaggaattaatggatcctatcattcataagt |
4136 |
T |
|
| Q |
236 |
atgactatctatcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcagg |
335 |
Q |
| |
|
|| | ||| |||||| ||||||| ||||||| ||| |||||||||| ||||||| ||| ||||| | || |||||||||||||||||| |||| || |
|
|
| T |
4135 |
atagccttctgacaaatatgtggtcagttggaaatatgatgaatactccgagatgcttgtttggttcggctagtcttggagaaattgcaatactagccgg |
4036 |
T |
|
| Q |
336 |
tgggtgtgatccatgtggcaacatcttgagctcagctgagctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagcaagaaaa |
435 |
Q |
| |
|
||| |||||||||||||||||||| |||||| | |||||||| || ||| ||||||||||||| || | ||||||||| |||||||||||||||||||| |
|
|
| T |
4035 |
tggttgtgatccatgtggcaacatattgagcgctgctgagctctataacgcagacactggaaattggaagacccttccaaacatgaataaagcaagaaaa |
3936 |
T |
|
| Q |
436 |
atgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataa |
535 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| ||||||||||| ||||| |||||||| | |
|
|
| T |
3935 |
atgtgttcaagtgtattcatggatggaaaattttatgtccttggtgggatagcagctgacaaaaaaacacagcttacatgtggggaggagtttgatatga |
3836 |
T |
|
| Q |
536 |
agagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgcagttgt |
635 |
Q |
| |
|
||| |||| |||||||||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| |||||||||||||||||||||| |
|
|
| T |
3835 |
agacaaaaaaatggcgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacctcctttgattgcagttgt |
3736 |
T |
|
| Q |
636 |
aaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcctgagc |
733 |
Q |
| |
|
|||||||||||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||||||||| ||||| |||| |
|
|
| T |
3735 |
aaaaaatgtattgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcattggaagctttcccgagc |
3638 |
T |
|
| Q |
734 |
aagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttcattgtagaggcatgttgga |
833 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||||||||| ||||| |||||| ||| | ||||| |||||||| || ||||| || || ||| |||| |
|
|
| T |
3637 |
aagctacttcgatgaatggttggggattagcctttcgagcatgcggagatcatctattatttcttggaggtcctgttattcatggtggaataatgatgga |
3538 |
T |
|
| Q |
834 |
aatcaatgcttgggtcccaaatgaaagagcgatacaatggaatcaacttgcgagaaagaaaatagggagctttgtgtatagttgcattgtgatgggatgt |
933 |
Q |
| |
|
||||||||||||| ||||||||||| ||| | ||||||||||| ||||| |||| || |||| | |||||| ||| ||| | ||||||||||||| |
|
|
| T |
3537 |
aatcaatgcttggatcccaaatgaaggagagccacaatggaatcggcttgcaggaaatcaatcagggggttttgtgcataattgtactgtgatgggatgt |
3438 |
T |
|
| Q |
934 |
tgatg |
938 |
Q |
| |
|
||||| |
|
|
| T |
3437 |
tgatg |
3433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105; HSP #5
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 619 - 938
Target Start/End: Complemental strand, 15899 - 15580
Alignment:
| Q |
619 |
cctttgattgcagttgtaaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccat |
716 |
Q |
| |
|
||||||||||| |||||||||||||||||| || ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||| |
|
|
| T |
15899 |
cctttgattgcggttgtaaaaaatgtattggatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcat |
15802 |
T |
|
| Q |
717 |
tggaagatttcctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttcat |
816 |
Q |
| |
|
|||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| ||| | ||||| |||||||| || ||||| |
|
|
| T |
15801 |
tggaagctttcccgagcaagctacttcgatgaatggttggggattagcctttcgagcatgcggagatcatctattatttcttggaggtcctgttattcat |
15702 |
T |
|
| Q |
817 |
tgtagaggcatgttggaaatcaatgcttgggtcccaaatgaaagagcgatacaatggaatcaacttgcgagaaagaaaatagggagctttgtgtatagtt |
916 |
Q |
| |
|
|| || ||| ||||||||||||||||| ||||||||||| ||| | ||||||||||| ||||| |||| || |||| | |||||| ||| || |
|
|
| T |
15701 |
ggtggaataatgatggaaatcaatgcttggatcccaaatgaaggagagccacaatggaatcggcttgcaggaaatcaatcagggggttttgtgcataatt |
15602 |
T |
|
| Q |
917 |
gcattgtgatgggatgttgatg |
938 |
Q |
| |
|
| | |||||||||||||||||| |
|
|
| T |
15601 |
gtactgtgatgggatgttgatg |
15580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1330 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: scaffold1330
Description:
Target: scaffold1330; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 36 - 877
Target Start/End: Original strand, 1156 - 1997
Alignment:
| Q |
36 |
gggcatagaagaacatcgggtttacttctcttgtgatctacttaaatgggaggcatttgatccaaatcgtggtcgatttattcaattgcctaaaattcct |
135 |
Q |
| |
|
|||||||| ||||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||| ||||| || || ||||| ||||| || |
|
|
| T |
1156 |
gggcatagtagaacattgggtgtacttctcttctgaagcccttaaatgggaggcttttgatccaaatcgtaatcgatggatacatttgccaaaaatgact |
1255 |
T |
|
| Q |
136 |
tgtgataaagtttttatgttgtgtgataaggagtcgctggctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagt |
235 |
Q |
| |
|
|||||| | |||| | || |||| ||| ||| ||||||| ||||||||||||||||| ||||||| |||||| |||| ||||| ||||||||||| |
|
|
| T |
1256 |
tgtgatgcatgtttttcgctggcagatagggaatcgttggctgttggtactgagcttctagtctttggaaaggaattaatggatcctatcattcataagt |
1355 |
T |
|
| Q |
236 |
atgactatctatcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcagg |
335 |
Q |
| |
|
|| | ||| |||||| ||||||| ||||||| ||| |||||||||| ||||||| ||| ||||| | || |||||||||||||||||| |||| || |
|
|
| T |
1356 |
atagccttctgacaaatatgtggtcagttggaaatatgatgaatactccgagatgcttgtttggttcggctagtcttggagaaattgcaatactagccgg |
1455 |
T |
|
| Q |
336 |
tgggtgtgatccatgtggcaacatcttgagctcagctgagctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagcaagaaaa |
435 |
Q |
| |
|
||| |||||||||||||||||||| |||||||| |||||||| || ||| ||||||||||||| || | ||||||||| |||||||||||||||||||| |
|
|
| T |
1456 |
tggttgtgatccatgtggcaacatattgagctctgctgagctctataacgcagacactggaaattggaagacccttccaaacatgaataaagcaagaaaa |
1555 |
T |
|
| Q |
436 |
atgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataa |
535 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| ||||||||||| ||||| |||||||| | |
|
|
| T |
1556 |
atgtgttcaagtgtattcatggatggaaaattttatgtccttggtgggatagcagctgacaaaaaaacacagcttacatgtggggaggagtttgatatga |
1655 |
T |
|
| Q |
536 |
agagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgcagttgt |
635 |
Q |
| |
|
||| |||| |||||||||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| |||||||||||||||||||||| |
|
|
| T |
1656 |
agacaaaaaaatggcgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacctcctttgattgcagttgt |
1755 |
T |
|
| Q |
636 |
aaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcctgagc |
733 |
Q |
| |
|
|||||||||||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||||||||| ||||| |||| |
|
|
| T |
1756 |
aaaaaatgtattgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcattggaagctttcccgagc |
1853 |
T |
|
| Q |
734 |
aagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttcattgtagaggcatgttgga |
833 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||||||||| ||||| |||||| ||| | ||||| |||||||| || ||||| || | ||| |||| |
|
|
| T |
1854 |
aagctacttcgatgaatggttggggattagcctttcgagcatgcggagatcatctattatttcttggaggtcctgttattcatggtgcaataatgatgga |
1953 |
T |
|
| Q |
834 |
aatcaatgcttgggtcccaaatgaaagagcgatacaatggaatc |
877 |
Q |
| |
|
||||||||||||| ||||||||||| ||| | ||||||||||| |
|
|
| T |
1954 |
aatcaatgcttggatcccaaatgaaggagagccacaatggaatc |
1997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0496 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: scaffold0496
Description:
Target: scaffold0496; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 36 - 805
Target Start/End: Original strand, 2354 - 3123
Alignment:
| Q |
36 |
gggcatagaagaacatcgggtttacttctcttgtgatctacttaaatgggaggcatttgatccaaatcgtggtcgatttattcaattgcctaaaattcct |
135 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||| ||| ||| | |||||||| ||||||||||||||| ||||| || || ||||||| ||| || |
|
|
| T |
2354 |
gggcatagtagaacattgggtttacttctcttctgaagcccttgagtgggaggcttttgatccaaatcgtaatcgatggatgcatttgcctataatgact |
2453 |
T |
|
| Q |
136 |
tgtgataaagtttttatgttgtgtgataaggagtcgctggctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagt |
235 |
Q |
| |
|
|||||| || ||||| ||||| |||| ||| || ||||||| ||||||||||||||||| ||||||| |||||| |||| ||||| ||||||||||| |
|
|
| T |
2454 |
tgtgatcaatgttttacgttgtcagatagggaatcattggctgttggtactgagcttctagtctttggaaaggaattaatggctcctatcattcataagt |
2553 |
T |
|
| Q |
236 |
atgactatctatcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcagg |
335 |
Q |
| |
|
|| ||| ||| |||||| ||||||| ||||||||||| |||||||||||||||||| ||| ||||| | || |||||||||||||||||| |||| || |
|
|
| T |
2554 |
ataactttctgacaaatatgtggtcagttggaaaaatgatgaatactccaagatgcttgtttggttcggctagtcttggagaaattgcaatactagctgg |
2653 |
T |
|
| Q |
336 |
tgggtgtgatccatgtggcaacatcttgagctcagctgagctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagcaagaaaa |
435 |
Q |
| |
|
||| ||||||||| |||||| ||| |||||||| |||||||| || ||| |||| |||||||| || || ||||||||| |||||||||||||||||||| |
|
|
| T |
2654 |
tggttgtgatccacgtggcagcatattgagctctgctgagctctataacgcagatactggaaattgggagacccttccaaacatgaataaagcaagaaaa |
2753 |
T |
|
| Q |
436 |
atgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataa |
535 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| ||||||||||| || | |||||| |||| ||||| |||||||||||||||||| |||||||||| |
|
|
| T |
2754 |
atgtgttcaagtgtatttatggatggaaaattttacgtccttggtgggatagcagctgacaaaaaaacacaacttacatgtggtgaggagtttgatataa |
2853 |
T |
|
| Q |
536 |
agagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgcagttgt |
635 |
Q |
| |
|
||| ||| ||||||||||||||||||||||| ||||||| | ||||||||| | ||| ||||||| |||| ||| ||||||| |||||||||||||| |
|
|
| T |
2854 |
agaataaaaaatggcgtgaaatacccaacatgctcccagtacgaactggagtgtctgagacaccaccttcttttgggtcacctcccttgattgcagttgt |
2953 |
T |
|
| Q |
636 |
aaaaaatgtattgtataatgctgattacgcaacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcctgagcaa |
735 |
Q |
| |
|
|||||||||||||||| ||| ||||| | || | | |||||||| |||||| ||||| |||| |||| |||||| | ||||||||| |||||||||||| |
|
|
| T |
2954 |
aaaaaatgtattgtatgctgcagattatggaaaacaagaagtaaagaagtatgataaagacaacaactattgggtcatcattggaagctttcctgagcaa |
3053 |
T |
|
| Q |
736 |
gccacttcaatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtc |
805 |
Q |
| |
|
|| || || |||| ||||||||| |||| ||||| |||||||||||| ||| | ||||| ||||||| |
|
|
| T |
3054 |
gctacatcggtgaatggttggggactagcatttcgatcatgtggagataaactattatttcttggaggtc |
3123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 417 - 473
Target Start/End: Original strand, 17356619 - 17356675
Alignment:
| Q |
417 |
catgaataaagcaagaaaaatgtgttcgggtgtatttatggatggaaaattttatgt |
473 |
Q |
| |
|
|||||||||| | || || |||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
17356619 |
catgaataaaccgaggaagatgtgttctggtgtattcatggatggaaaattttatgt |
17356675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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