View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13061_low_22 (Length: 544)

Name: NF13061_low_22
Description: NF13061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13061_low_22
NF13061_low_22
[»] chr6 (23 HSPs)
chr6 (11-528)||(13930543-13931060)
chr6 (226-517)||(13894439-13894731)
chr6 (227-516)||(14106024-14106315)
chr6 (215-528)||(14020982-14021292)
chr6 (215-528)||(14108774-14109085)
chr6 (210-412)||(14083063-14083265)
chr6 (330-482)||(14023895-14024047)
chr6 (215-390)||(13474371-13474547)
chr6 (17-183)||(14023576-14023742)
chr6 (16-165)||(13897826-13897975)
chr6 (226-326)||(13876520-13876621)
chr6 (215-475)||(13910159-13910423)
chr6 (226-324)||(13864005-13864104)
chr6 (354-517)||(13876355-13876520)
chr6 (11-163)||(13894814-13894955)
chr6 (244-344)||(14013600-14013700)
chr6 (10-98)||(13876896-13876984)
chr6 (227-293)||(14023814-14023880)
chr6 (124-163)||(13474741-13474780)
chr6 (412-471)||(14013714-14013773)
chr6 (30-64)||(13474780-13474814)
chr6 (16-44)||(13864286-13864314)
chr6 (30-66)||(14082851-14082887)


Alignment Details
Target: chr6 (Bit Score: 514; Significance: 0; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 514; E-Value: 0
Query Start/End: Original strand, 11 - 528
Target Start/End: Original strand, 13930543 - 13931060
Alignment:
Q  11 aacagagacaagttctaagtcataaacaatttcacattttgaaattcttcattattgctgatgcatgattatataagcaaaattcagcctccaccagaat 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13930543 aacacagacaagttctaagtcataaacaatttcacattttgaaattcttcattattgctgatgcatgattatataagcaaaattcagcctccaccagaat 13930642  T
Q  111 cccagaagcaataacttcaacagcaagctaacttggttcgacagttaatatcccgcaatactgtgagaactaagaactattataaagagagtacaaaagg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13930643 cccagaagcaataacttcaacagcaagctaacttggttcgacagttaatatcccgcaatactgtgagaactaagaactattataaagagagtacaaaagg 13930742  T
Q  211 taacttttactcgttgaatacttcacaaatgtttattgcataaataaatgacagagaatacaaaaggtagtgcaagttacaactcaattcaacaagagac 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13930743 taacttttactcgttgaatacttcacaaatgtttattgcataaataaatgacagagaatacaaaaggtagtgcaagttacaactcaattcaacaagagac 13930842  T
Q  311 taatacataagagaaaaatgacataaccacatattacaaagatacaccccaacaatctatttcctagtggattgtttctcctctcccctcaacgtctctc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13930843 taatacataagagaaaaatgacataaccacatattacaaagatacaccccaacaatctatttcctagtggattgtttctcctctcccctcaacgtctctc 13930942  T
Q  411 aaaacactaaatttgtccggattacacaatccggatgtgtaaaacagggtgtcgtttgcacgtccagattgtatattaaagaaaaatagtgttttgagac 510  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13930943 aaaacactaaatttgtccggattacacaatccggatgtgtaaaacagggtgtcgtttgcacgtccagattgtatattaaagaaaaatagtgttttgagac 13931042  T
Q  511 atgttgggagcaaggaga 528  Q
    ||||||||||||||||||    
T  13931043 atgttgggagcaaggaga 13931060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 226 - 517
Target Start/End: Complemental strand, 13894731 - 13894439
Alignment:
Q  226 gaatacttcacaaatgtttattgcataaataaatgacagagaatacaaaaggtagtgcaagttacaa-ctcaattcaacaagagactaatacataagaga 324  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||| | |||||||| ||| ||| |||||||||||||||| ||||||| |||    
T  13894731 gaatacttcaccaatgtttattgcataaataaattacagagaatacaaaaggaattgcaagttgcaaactccattcaacaagagactagtacataaaaga 13894632  T
Q  325 aaaatgacataaccacatattacaaagatacaccccaacaatctatttcctagtggattgtttctcctctcccctcaacgtctctcaaaacactaaattt 424  Q
     ||||||||| |||| |||||| ||| || ||||||| ||||||||||  ||  |||| |||||||||| ||||||||| |||||||||||||  |||||    
T  13894631 gaaatgacatgaccatatattaaaaatatgcaccccatcaatctatttattataggatagtttctcctcgcccctcaacatctctcaaaacacacaattt 13894532  T
Q  425 gtccggattacacaatccggatgtgtaaaacagggtgtcgtttgcacgtccagattgtatattaaagaaaaatagtgttttgagacatgttgg 517  Q
    ||||| ||||| ||||||||| ||||||||  |  |||| |||||| ||||  ||| | || | ||||||||||||||||| |||||||||||    
T  13894531 gtccgaattactcaatccggacgtgtaaaatggattgtcttttgcaagtccgaattttgtaatcaagaaaaatagtgttttaagacatgttgg 13894439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 227 - 516
Target Start/End: Original strand, 14106024 - 14106315
Alignment:
Q  227 aatacttcacaaatgtttattgcataaataaatgacagagaatacaaaaggtagtgcaagttacaactcaattcaacaagagactaatacataagagaaa 326  Q
    |||||| ||| |||||||||||||| ||||||| ||||||||||||||||| | |||||||| |||||||||||||| | |||||| ||||||||||| |    
T  14106024 aatactccaccaatgtttattgcatgaataaattacagagaatacaaaaggcattgcaagttgcaactcaattcaacgacagactagtacataagagata 14106123  T
Q  327 aatgacataaccacatattacaaagatacaccccaacaatctatttcctagtggattgtttctcctctcccctcaacgtctctcaaaacactaaatttgt 426  Q
    || |||||||||| |||||||||||| | || ||| |||||||||  |||| |||||| | ||||||  |||| ||| |||||||||| ||| |||||||    
T  14106124 aacgacataaccatatattacaaagagatactccaccaatctattcgctagaggattgctgctcctcggcccttaacatctctcaaaatactgaatttgt 14106223  T
Q  427 ccggattacacaatccggatgtgtaaaacagggtgtcgtttgcacgtccagattgtatattaaagaaaaat--agtgttttgagacatgttg 516  Q
    | || |||||||||  |||||||||||||| ||||||  ||||||||| |||||||||| |||||| ||||  ||||||| |||| ||||||    
T  14106224 ctgggttacacaatttggatgtgtaaaacaaggtgtcaattgcacgtctagattgtataataaagataaattcagtgtttcgagatatgttg 14106315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 215 - 528
Target Start/End: Original strand, 14020982 - 14021292
Alignment:
Q  215 ttttactcgttgaatacttcacaaatgtttattgcataaataaatgacagagaat----acaaaaggtagtgcaagttacaactcaattcaacaagagac 310  Q
    ||||||| || ||||||||||  |||||||||||||| ||||||| |||||||||    |||||||||| |||||||| |||||||||||||||||||||    
T  14020982 ttttacttgtagaatacttcaacaatgtttattgcatgaataaattacagagaattaatacaaaaggtattgcaagttgcaactcaattcaacaagagac 14021081  T
Q  311 taatacataagagaaaaatgacataaccacatattacaaagatacaccccaacaatctatttcctagtggattgtttctcctctcccctcaacgtctctc 410  Q
    || ||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||| ||||  ||| ||||||| ||  || ||||| ||||||    
T  14021082 tattacataagagataaatgacataaccacatattacaaagagacaccccaaaaatctatttgctagaagatagtttctcttcggccatcaacatctctc 14021181  T
Q  411 aaaacactaaatttgtccggattacacaatccggatgtgtaaaacagggtgtcgtttgcacgtccagattgtatatt--aaagaaaaatagtgttttgag 508  Q
             ||||||||| ||||||||||||| ||||||||||||| |||||| |||||| |||  ||||||||| |  ||| |||   |||||||||||    
T  14021182 ---------aatttgtcccgattacacaatccagatgtgtaaaacaaggtgtcttttgcatgtctggattgtataatcaaaacaaaccgagtgttttgag 14021272  T
Q  509 acatgttgggagcaaggaga 528  Q
    ||||||| ||||| ||||||    
T  14021273 acatgttaggagcgaggaga 14021292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 215 - 528
Target Start/End: Original strand, 14108774 - 14109085
Alignment:
Q  215 ttttactcgttgaatacttcacaaatgtttattgcataaataaatgacagagaa-tacaaaaggtagtgcaagttacaactcaattcaacaagag---ac 310  Q
    ||||||| || |||||||||||  | ||||||||||| ||||||| |||||||| ||||||||||| |||||||| |||||||||||||||||||   ||    
T  14108774 ttttacttgtagaatacttcaccgaagtttattgcatgaataaattacagagaaatacaaaaggtattgcaagttgcaactcaattcaacaagagatcac 14108873  T
Q  311 taatacataagagaaaaatgacataaccacatattacaaagatacacccc-aacaatctatttcctagtggattgtttctcctctcccctcaacgtctct 409  Q
    || ||||||||  | ||||||||||||||||||||||||||| ||||||| |||||||||||||| ||  ||| ||||||| |   || ||||| |||||    
T  14108874 tattacataagcaataaatgacataaccacatattacaaagagacaccccgaacaatctatttccaagaagatagtttctcttaagccatcaacatctct 14108973  T
Q  410 caaaacactaaatttgtccggattacacaatccggatgtgtaaaacagggtgtcgtttgcacgtccagattgtatattaaagaaaaat--agtgttttga 507  Q
    |         ||||||||||||||||| ||||| ||||| ||||| | |||||| ||||||||||| |||||||||   |||| ||||  ||||||||||    
T  14108974 c---------aatttgtccggattacagaatccagatgtctaaaataaggtgtcttttgcacgtccggattgtataaacaagacaaattgagtgttttga 14109064  T
Q  508 gacatgttgggagcaaggaga 528  Q
    |||||||||||||||||||||    
T  14109065 gacatgttgggagcaaggaga 14109085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 210 - 412
Target Start/End: Original strand, 14083063 - 14083265
Alignment:
Q  210 gtaacttttactcgttgaatacttcacaaatgtttattgcataaataaatgacagagaatacaaaaggtagtgcaagttacaactcaattcaacaagaga 309  Q
    |||| ||||||| || ||||||||||  | |||||||||||||||||||| ||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  14083063 gtaatttttacttgtagaatacttcatcattgtttattgcataaataaattacagagaatacaaaaggtactgcatgttgcaactcaattcaacaagaga 14083162  T
Q  310 ctaatacataagagaaaaatgacataaccacatattacaaagatacaccccaacaatctatttcctagtggattgtttctcctctcccctcaacgtctct 409  Q
    ||| ||||||| ||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||||  ||| ||||||| ||  || ||||| |||||    
T  14083163 ctattacataaaagataaaagacataaccacatattacaaagtgacaccccaacaatctatttcctagaagatggtttctcttcggccatcaacatctct 14083262  T
Q  410 caa 412  Q
    |||    
T  14083263 caa 14083265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 330 - 482
Target Start/End: Original strand, 14023895 - 14024047
Alignment:
Q  330 gacataaccacatattacaaagatacaccccaacaatctatttcctagtggattgtttctcctctcccctcaacgtctctcaaaacactaaatttgtccg 429  Q
    |||||||||| |||||||||||| | || ||| |||||||||  |||| |||||| ||||||||  |||||||| |||||||||||||| |||||||| |    
T  14023895 gacataaccatatattacaaagagatactccaccaatctattcgctagaggattgcttctcctcggccctcaacatctctcaaaacactcaatttgtctg 14023994  T
Q  430 gattacacaatccggatgtgtaaaacagggtgtcgtttgcacgtccagattgt 482  Q
     |||||||||||| || ||||||||||||||||| ||||||| ||| ||||||    
T  14023995 aattacacaatcccgacgtgtaaaacagggtgtcttttgcacatcctgattgt 14024047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 215 - 390
Target Start/End: Complemental strand, 13474547 - 13474371
Alignment:
Q  215 ttttactcgttgaatacttcacaaatgtttattgcata--aataaatgacagagaatacaaaaggtagtgcaagttacaactcaattcaacaagagacta 312  Q
    ||||||| || ||||||  ||| |||||||||||||||  ||||||| |||||||||||||||  || |||||||| |||||| ||||||||||||||||    
T  13474547 ttttacttgtagaatacaccaccaatgtttattgcatatgaataaattacagagaatacaaaatctattgcaagtt-caactcgattcaacaagagacta 13474449  T
Q  313 atacataagagaaaaatgacataaccacatattacaaagatacaccccaacaatctatttcctagtggattgtttctc 390  Q
      |||||||||| ||||||||||| ||||||||||||| | |||  |||||||||||||| ||||  ||| |||||||    
T  13474448 taacataagagataaatgacataatcacatattacaaaaacacattccaacaatctattttctagaagatagtttctc 13474371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 17 - 183
Target Start/End: Original strand, 14023576 - 14023742
Alignment:
Q  17 gacaagttctaagtcataaacaatttcacattttgaaattcttcattattgctgatgcatgattatataagcaaaattcagcctccaccagaatcccaga 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |  |||    || || ||| |||||| |||||||||     
T  14023576 gacaagttctaagtcataaacaatttcacattttgaaattcttcattactgctgatgcatgactgaatatttgaatttaagcatccaccggaatcccagc 14023675  T
Q  117 agcaataacttcaacagcaagctaacttggttcgacagttaatatcccgcaatactgtgagaactaa 183  Q
    |||||  ||||||||||| |  |||||||||| |||||||| ||||| ||  | |||||||||||||    
T  14023676 agcaactacttcaacagccaattaacttggttagacagttactatcctgcgcttctgtgagaactaa 14023742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 13897975 - 13897826
Alignment:
Q  16 agacaagttctaagtcataaacaatttcacattttgaaattcttcattattgctgatgcatgattatataagcaaaattcagcctccaccagaatcccag 115  Q
    |||| |||||||| |||||| ||||||||||| |||| ||| || |||| ||||||||||||| |||||| | ||| ||||||   ||||||||||||||    
T  13897975 agacgagttctaattcataagcaatttcacatcttgacattatttattactgctgatgcatgactatatatgtaaatttcagctatcaccagaatcccag 13897876  T
Q  116 aagcaataacttcaacagcaagctaacttggttcgacagttaatatcccg 165  Q
     |||||| |||||||  || |||||||||||||| |||||||||||||||    
T  13897875 cagcaattacttcaattgccagctaacttggttcaacagttaatatcccg 13897826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 226 - 326
Target Start/End: Complemental strand, 13876621 - 13876520
Alignment:
Q  226 gaatacttcacaaatgtttattgcataaataaatgacagagaatacaaaaggtagtgcaagttac-aactcaattcaacaagagactaatacataagaga 324  Q
    ||||||||||| ||||||||| |||||||||||| ||| ||||||||||||  | |||||||| | |||||||||||||||||||||| |||||||||||    
T  13876621 gaatacttcaccaatgtttatggcataaataaattacacagaatacaaaagaaattgcaagttgcaaactcaattcaacaagagactactacataagaga 13876522  T
Q  325 aa 326  Q
    ||    
T  13876521 aa 13876520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 215 - 475
Target Start/End: Original strand, 13910159 - 13910423
Alignment:
Q  215 ttttactcgttgaatacttcacaaatgtttattgcataaataaatgacagagaatacaaaaggtagtgcaagttacaactcaattcaacaagagactaat 314  Q
    ||||||| || ||||||||||| ||||||||||| ||   | ||| | |||||||||||||||||  ||||||||||||||||||||||| |||||| ||    
T  13910159 ttttacttgtagaatacttcaccaatgtttattgtatgcttgaattatagagaatacaaaaggtatcgcaagttacaactcaattcaacatgagactgat 13910258  T
Q  315 acataagagaaaaatgacataacca-----catattacaaagatacaccccaacaatctatttcctagtggattgtttctcctctcccctcaacgtctct 409  Q
    |||| ||||| |||| |||||| ||      |||||||||||| | | |||| || |||||| ||||| |||   |||||||||   ||||||| ||  |    
T  13910259 acatgagagataaataacataatcatatattatattacaaagagaaagcccaccattctattccctagaggaaactttctcctccaacctcaac-tcgtt 13910357  T
Q  410 caaaacactaaatttgtccggattacacaatccggatgtgtaaaacagggtgtcgtttgcacgtcc 475  Q
    ||||||||| ||||| | | ||||||| ||||| || ||||||| |||||| ||  ||||||||||    
T  13910358 caaaacacttaatttttaccgattacaaaatccagacgtgtaaatcagggtttctgttgcacgtcc 13910423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 226 - 324
Target Start/End: Complemental strand, 13864104 - 13864005
Alignment:
Q  226 gaatacttcacaaatgtttattgcataaataaatgacagagaatacaaaaggtagtgcaagttac-aactcaattcaacaagagactaatacataagaga 324  Q
    ||||||||||| ||||||||| |||||||||||| ||| |||||| |||||    |||||||| | |||||||||||||||||||||| |||||||||||    
T  13864104 gaatacttcaccaatgtttatggcataaataaattacacagaatagaaaagaacttgcaagttgcaaactcaattcaacaagagactactacataagaga 13864005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 354 - 517
Target Start/End: Complemental strand, 13876520 - 13876355
Alignment:
Q  354 acaccccaacaatctatttcctagtggattgtttctcctctcccctcaacgtctctcaaaacactaaatttgtccggattacacaatccggatgtgtaaa 453  Q
    |||||||| |||||||||||  |  |||| |||||||||| ||||| ||| ||| | |||||||  |||||||||  |||||| ||| |||| |||||||    
T  13876520 acaccccatcaatctatttctgataggatagtttctcctcgccccttaacatctattaaaacacacaatttgtccaaattacaaaatacggacgtgtaaa 13876421  T
Q  454 acagggtgtcgtttgcacgtccagattgtatattaaagaaaaat--agtgttttgagacatgttgg 517  Q
    | |||||||| |||||| ||||| ||| | || | |||| ||||  ||||||||||||||||||||    
T  13876420 atagggtgtcttttgcaagtccaaattttgtaatcaagacaaatcaagtgttttgagacatgttgg 13876355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 163
Target Start/End: Complemental strand, 13894955 - 13894814
Alignment:
Q  11 aacagagacaagttctaagtcataaacaatttcacattttgaaattcttcattattgctgatgcatgattatataagcaaaattcagcctccaccagaat 110  Q
    |||| ||||||||| ||||||||||||||||||||||||| | ||  ||||||| | ||||||||||| || ||| | ||| ||||||           |    
T  13894955 aacatagacaagttataagtcataaacaatttcacattttcatataattcattacttctgatgcatgactacatatgtaaatttcagc-----------t 13894867  T
Q  111 cccagaagcaataacttcaacagcaagctaacttggttcgacagttaatatcc 163  Q
    ||||| |||||| |||||||| ||||||||||||||| |||||||||||||||    
T  13894866 cccagcagcaattacttcaactgcaagctaacttggtccgacagttaatatcc 13894814  T

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Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 344
Target Start/End: Original strand, 14013600 - 14013700
Alignment:
Q  244 tattgcataaataaatgacagagaatacaaaaggtagtgcaagttacaactcaattcaacaagagactaatacataagagaaaaatgacataaccacata 343  Q
    |||||||||||||||  |||||||||||||| |||| |||| | | |||||||||||||  ||| ||||||||||| | || |||||||||||||| |||    
T  14013600 tattgcataaataaaatacagagaatacaaatggtattgcatgctgcaactcaattcaagtagaaactaatacatatgtgataaatgacataaccatata 14013699  T
Q  344 t 344  Q
    |    
T  14013700 t 14013700  T

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Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 13876984 - 13876896
Alignment:
Q  10 caacagagacaagttctaagtcataaacaatttcacattttgaaattcttcattattgctgatgcatgattatataagcaaaattcagc 98  Q
    ||||| ||| ||||||||||||||||||||||||| ||||| | ||||||||| | | ||||||||||| |||||| | ||| ||||||    
T  13876984 caacatagataagttctaagtcataaacaatttcagattttcatattcttcatgacttctgatgcatgactatatatgtaaatttcagc 13876896  T

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Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 14023814 - 14023880
Alignment:
Q  227 aatacttcacaaatgtttattgcataaataaatgacagagaatacaaaaggtagtgcaagttacaac 293  Q
    |||||||||  |||||||||||||| ||||||| ||||||||||||||||| | |||||||| ||||    
T  14023814 aatacttcatcaatgtttattgcatgaataaattacagagaatacaaaaggcattgcaagttgcaac 14023880  T

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Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 13474780 - 13474741
Alignment:
Q  124 acttcaacagcaagctaacttggttcgacagttaatatcc 163  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  13474780 acttcaactgcaagctaacttggttcgacaattaatatcc 13474741  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 14013714 - 14013773
Alignment:
Q  412 aaacactaaatttgtccggattacacaatccggatgtgtaaaacagggtgtcgtttgcac 471  Q
    ||||||| |||||||| |||||||||||||||||  |||||||| || |||| |||||||    
T  14013714 aaacactcaatttgtctggattacacaatccggacatgtaaaacgggatgtcttttgcac 14013773  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 13474814 - 13474780
Alignment:
Q  30 tcataaacaatttcacattttgaaattcttcatta 64  Q
    ||||||||||||||||||||||| |||||||||||    
T  13474814 tcataaacaatttcacattttgatattcttcatta 13474780  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 44
Target Start/End: Complemental strand, 13864314 - 13864286
Alignment:
Q  16 agacaagttctaagtcataaacaatttca 44  Q
    |||||||||||||||||||||||||||||    
T  13864314 agacaagttctaagtcataaacaatttca 13864286  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 14082851 - 14082887
Alignment:
Q  30 tcataaacaatttcacattttgaaattcttcattatt 66  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  14082851 tcataaacaatttcacattttgatattctttattatt 14082887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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