View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13061_low_23 (Length: 538)

Name: NF13061_low_23
Description: NF13061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13061_low_23
NF13061_low_23
[»] chr5 (57 HSPs)
chr5 (222-521)||(36342638-36342938)
chr5 (119-212)||(7126051-7126145)
chr5 (41-151)||(14143901-14144011)
chr5 (119-212)||(14144051-14144145)
chr5 (41-97)||(14411696-14411751)
chr5 (41-97)||(17762282-17762337)
chr5 (42-154)||(23979166-23979279)
chr5 (120-215)||(24650831-24650926)
chr5 (120-212)||(20709346-20709439)
chr5 (41-154)||(24837168-24837282)
chr5 (43-154)||(993751-993860)
chr5 (119-222)||(993871-993974)
chr5 (43-95)||(41001678-41001729)
chr5 (42-97)||(24837493-24837547)
chr5 (41-95)||(24651025-24651078)
chr5 (41-94)||(7126244-7126296)
chr5 (41-154)||(24074302-24074416)
chr5 (57-153)||(41001370-41001465)
chr5 (119-206)||(4919130-4919218)
chr5 (41-97)||(6817122-6817177)
chr5 (156-212)||(6817256-6817312)
chr5 (41-97)||(17762606-17762661)
chr5 (42-154)||(31799640-31799753)
chr5 (42-97)||(18336780-18336833)
chr5 (47-154)||(27159222-27159327)
chr5 (41-95)||(31799965-31800018)
chr5 (145-222)||(24837293-24837370)
chr5 (119-206)||(17762432-17762520)
chr5 (145-205)||(31799781-31799841)
chr5 (148-212)||(41001487-41001551)
chr5 (41-154)||(4918988-4919103)
chr5 (42-97)||(18336467-18336521)
chr5 (150-197)||(18336638-18336685)
chr5 (56-95)||(29445131-29445170)
chr5 (43-93)||(4919317-4919366)
chr5 (47-97)||(7125923-7125972)
chr5 (109-154)||(7126182-7126227)
chr5 (41-154)||(14144166-14144280)
chr5 (150-222)||(14411847-14411920)
chr5 (156-212)||(24074490-24074546)
chr5 (44-151)||(24650704-24650810)
chr5 (41-97)||(30512287-30512342)
chr5 (41-97)||(30552627-30552682)
chr5 (109-152)||(6817388-6817431)
chr5 (156-191)||(24074561-24074596)
chr5 (42-154)||(994011-994123)
chr5 (56-97)||(22571090-22571131)
chr5 (109-154)||(24074567-24074612)
chr5 (41-94)||(27158990-27159042)
chr5 (56-97)||(29444819-29444860)
chr5 (150-186)||(4919068-4919104)
chr5 (150-186)||(7126181-7126217)
chr5 (150-190)||(14144161-14144201)
chr5 (41-97)||(14411989-14412044)
chr5 (41-97)||(20709535-20709590)
chr5 (150-190)||(27159068-27159108)
chr5 (150-190)||(31799718-31799758)
[»] chr4 (76 HSPs)
chr4 (41-212)||(48259822-48259995)
chr4 (119-212)||(37012841-37012935)
chr4 (41-97)||(31218305-31218360)
chr4 (145-212)||(7819191-7819258)
chr4 (119-212)||(9396849-9396943)
chr4 (119-212)||(18667439-18667533)
chr4 (119-212)||(38574102-38574196)
chr4 (45-154)||(38574233-38574343)
chr4 (41-97)||(46046748-46046802)
chr4 (119-198)||(9619129-9619209)
chr4 (41-97)||(9619303-9619358)
chr4 (41-97)||(41946964-41947019)
chr4 (41-97)||(46046429-46046484)
chr4 (45-154)||(3018014-3018125)
chr4 (145-212)||(46046558-46046625)
chr4 (145-222)||(9516734-9516811)
chr4 (145-222)||(31944127-31944204)
chr4 (41-152)||(37012974-37013085)
chr4 (41-97)||(9397022-9397077)
chr4 (43-95)||(9516611-9516662)
chr4 (56-154)||(15640729-15640828)
chr4 (42-154)||(26252502-26252615)
chr4 (40-154)||(38573967-38574081)
chr4 (145-212)||(3018189-3018256)
chr4 (41-154)||(3273620-3273735)
chr4 (145-212)||(4356058-4356125)
chr4 (145-212)||(34064116-34064183)
chr4 (56-154)||(9618993-9619093)
chr4 (119-212)||(18713110-18713204)
chr4 (136-206)||(31090201-31090271)
chr4 (56-152)||(31943962-31944061)
chr4 (43-97)||(35376164-35376217)
chr4 (42-99)||(3273941-3273996)
chr4 (150-222)||(26252418-26252491)
chr4 (42-95)||(41947180-41947232)
chr4 (42-94)||(9516937-9516988)
chr4 (41-97)||(31090385-31090440)
chr4 (47-91)||(48580196-48580239)
chr4 (157-212)||(48580000-48580055)
chr4 (41-95)||(13132265-13132318)
chr4 (41-91)||(18667620-18667669)
chr4 (42-154)||(31090060-31090174)
chr4 (43-97)||(34063983-34064036)
chr4 (56-97)||(3018334-3018375)
chr4 (41-94)||(7819347-7819399)
chr4 (45-94)||(9396702-9396750)
chr4 (41-94)||(31944277-31944329)
chr4 (56-97)||(35376451-35376492)
chr4 (41-97)||(12904746-12904801)
chr4 (119-206)||(15640865-15640953)
chr4 (43-91)||(15641046-15641093)
chr4 (41-97)||(36887679-36887734)
chr4 (56-99)||(12520650-12520693)
chr4 (56-90)||(31083428-31083462)
chr4 (45-94)||(7819018-7819066)
chr4 (109-154)||(9516678-9516723)
chr4 (150-187)||(13132204-13132241)
chr4 (109-154)||(13132206-13132251)
chr4 (109-154)||(18713028-18713073)
chr4 (56-97)||(20069622-20069663)
chr4 (109-154)||(37012775-37012820)
chr4 (56-97)||(43313535-43313576)
chr4 (109-154)||(48580131-48580176)
chr4 (56-97)||(51029097-51029138)
chr4 (150-186)||(3018090-3018126)
chr4 (150-186)||(3273700-3273736)
chr4 (47-91)||(4356210-4356253)
chr4 (109-153)||(9619245-9619289)
chr4 (45-97)||(13131943-13131994)
chr4 (110-154)||(26252337-26252381)
chr4 (150-186)||(31090139-31090175)
chr4 (150-190)||(37012785-37012825)
chr4 (150-186)||(38574046-38574082)
chr4 (150-186)||(38574232-38574268)
chr4 (61-97)||(43312227-43312263)
chr4 (65-97)||(53896468-53896500)
[»] chr1 (63 HSPs)
chr1 (41-154)||(18462285-18462398)
chr1 (119-215)||(17606458-17606555)
chr1 (41-154)||(17606573-17606685)
chr1 (41-154)||(39711337-39711451)
chr1 (41-97)||(33629014-33629069)
chr1 (121-212)||(42510148-42510240)
chr1 (42-97)||(18342341-18342395)
chr1 (41-96)||(33628689-33628743)
chr1 (145-212)||(39826184-39826251)
chr1 (119-212)||(48072111-48072205)
chr1 (41-154)||(4906961-4907075)
chr1 (41-94)||(29696564-29696616)
chr1 (145-206)||(33628830-33628891)
chr1 (145-206)||(39711249-39711310)
chr1 (45-97)||(17606307-17606358)
chr1 (41-97)||(20995697-20995752)
chr1 (119-199)||(29696714-29696794)
chr1 (41-154)||(24467628-24467741)
chr1 (41-154)||(34749137-34749250)
chr1 (42-97)||(39826370-39826424)
chr1 (156-215)||(39970777-39970836)
chr1 (145-212)||(52058145-52058212)
chr1 (42-154)||(39711074-39711185)
chr1 (41-152)||(30299231-30299342)
chr1 (119-222)||(13229882-13229985)
chr1 (156-212)||(30299419-30299475)
chr1 (41-93)||(52058336-52058387)
chr1 (42-97)||(8292804-8292858)
chr1 (41-154)||(8293072-8293187)
chr1 (156-191)||(16294206-16294241)
chr1 (55-94)||(17500781-17500820)
chr1 (56-99)||(17502051-17502094)
chr1 (151-206)||(34749277-34749332)
chr1 (56-99)||(37236731-37236774)
chr1 (42-97)||(39970970-39971024)
chr1 (56-95)||(42510341-42510380)
chr1 (145-212)||(43539524-43539591)
chr1 (42-93)||(52058011-52058061)
chr1 (56-154)||(4907227-4907327)
chr1 (119-212)||(20995819-20995912)
chr1 (41-95)||(27039637-27039690)
chr1 (41-154)||(30252163-30252279)
chr1 (62-154)||(42510034-42510127)
chr1 (41-95)||(48072287-48072340)
chr1 (124-212)||(24467783-24467871)
chr1 (41-94)||(29696884-29696936)
chr1 (42-95)||(34749431-34749483)
chr1 (56-93)||(43539675-43539712)
chr1 (42-94)||(13230059-13230110)
chr1 (41-93)||(18462612-18462663)
chr1 (41-97)||(39826049-39826104)
chr1 (145-212)||(7473926-7473993)
chr1 (124-222)||(18462440-18462538)
chr1 (41-154)||(20995933-20996046)
chr1 (42-154)||(24467892-24468002)
chr1 (156-190)||(20995928-20995962)
chr1 (109-154)||(17606376-17606421)
chr1 (150-186)||(4907040-4907076)
chr1 (150-186)||(8293071-8293107)
chr1 (150-186)||(34749215-34749251)
chr1 (150-186)||(39711336-39711372)
chr1 (109-153)||(39826312-39826356)
chr1 (41-97)||(43400752-43400807)
[»] chr8 (53 HSPs)
chr8 (41-154)||(10108369-10108483)
chr8 (42-154)||(14820295-14820407)
chr8 (41-97)||(5554868-5554923)
chr8 (33-97)||(21147927-21147990)
chr8 (145-212)||(10108547-10108614)
chr8 (42-97)||(43851665-43851719)
chr8 (119-204)||(17623029-17623115)
chr8 (41-154)||(10108635-10108749)
chr8 (41-154)||(14820559-14820673)
chr8 (42-95)||(18044153-18044205)
chr8 (145-206)||(22494561-22494622)
chr8 (41-97)||(10171467-10171522)
chr8 (145-212)||(43851798-43851865)
chr8 (119-212)||(2583470-2583564)
chr8 (41-95)||(7689849-7689902)
chr8 (119-212)||(42113118-42113212)
chr8 (119-215)||(30789638-30789735)
chr8 (41-97)||(21148260-21148315)
chr8 (119-222)||(26136835-26136939)
chr8 (41-97)||(30789831-30789886)
chr8 (145-212)||(7689700-7689767)
chr8 (119-197)||(14767656-14767735)
chr8 (145-215)||(5555046-5555116)
chr8 (56-154)||(5555134-5555234)
chr8 (41-95)||(7689523-7689576)
chr8 (41-99)||(20877067-20877124)
chr8 (56-97)||(30789521-30789562)
chr8 (56-97)||(42112998-42113039)
chr8 (145-198)||(42605930-42605983)
chr8 (41-94)||(42606080-42606132)
chr8 (41-94)||(43481642-43481694)
chr8 (41-97)||(17622889-17622944)
chr8 (41-97)||(26136684-26136739)
chr8 (41-97)||(35367409-35367464)
chr8 (119-197)||(21148086-21148164)
chr8 (41-154)||(26136950-26137063)
chr8 (41-99)||(38726686-38726743)
chr8 (150-190)||(5555129-5555169)
chr8 (150-190)||(10108630-10108670)
chr8 (150-190)||(14820554-14820594)
chr8 (41-93)||(42113309-42113360)
chr8 (110-153)||(22494454-22494497)
chr8 (61-99)||(21144827-21144865)
chr8 (109-154)||(21148005-21148050)
chr8 (56-97)||(40486642-40486683)
chr8 (56-97)||(40487738-40487779)
chr8 (41-93)||(1949651-1949702)
chr8 (150-186)||(10108448-10108484)
chr8 (150-186)||(14820372-14820408)
chr8 (45-93)||(17623214-17623261)
chr8 (150-190)||(21148015-21148055)
chr8 (109-153)||(30789773-30789817)
chr8 (110-154)||(42605822-42605866)
[»] chr3 (81 HSPs)
chr3 (41-154)||(9266974-9267088)
chr3 (41-154)||(30500042-30500154)
chr3 (41-97)||(14171910-14171965)
chr3 (41-97)||(14262360-14262415)
chr3 (41-154)||(30500306-30500419)
chr3 (138-212)||(14262170-14262244)
chr3 (156-222)||(17465492-17465558)
chr3 (39-97)||(27946189-27946246)
chr3 (145-222)||(9267099-9267176)
chr3 (119-215)||(14162021-14162118)
chr3 (41-94)||(16721990-16722042)
chr3 (41-154)||(16722256-16722370)
chr3 (41-154)||(35995677-35995791)
chr3 (120-212)||(47575406-47575499)
chr3 (145-222)||(49986705-49986782)
chr3 (42-154)||(5800605-5800718)
chr3 (41-97)||(19112763-19112818)
chr3 (41-97)||(45969914-45969969)
chr3 (42-97)||(14162194-14162248)
chr3 (42-97)||(19720333-19720387)
chr3 (119-197)||(43572541-43572620)
chr3 (119-212)||(21633046-21633140)
chr3 (147-212)||(4204842-4204907)
chr3 (119-215)||(5800755-5800852)
chr3 (145-222)||(19112889-19112966)
chr3 (120-212)||(30500175-30500268)
chr3 (145-222)||(35995802-35995879)
chr3 (145-222)||(45003673-45003750)
chr3 (41-94)||(49986526-49986578)
chr3 (41-97)||(9267298-9267353)
chr3 (41-97)||(11003731-11003786)
chr3 (42-154)||(14161871-14161984)
chr3 (148-212)||(16722171-16722235)
chr3 (41-97)||(35995999-35996054)
chr3 (156-212)||(38283738-38283794)
chr3 (119-206)||(45970065-45970153)
chr3 (41-97)||(45970240-45970295)
chr3 (145-212)||(14171720-14171787)
chr3 (56-95)||(14262049-14262088)
chr3 (119-197)||(15328610-15328689)
chr3 (42-97)||(19113089-19113143)
chr3 (57-154)||(45003761-45003859)
chr3 (41-91)||(20853694-20853743)
chr3 (47-97)||(27946114-27946163)
chr3 (41-154)||(21633161-21633275)
chr3 (41-154)||(43572388-43572502)
chr3 (147-212)||(52552826-52552891)
chr3 (42-154)||(5800870-5800982)
chr3 (156-212)||(20853830-20853886)
chr3 (41-97)||(24490243-24490298)
chr3 (41-93)||(33372405-33372456)
chr3 (145-197)||(33372583-33372635)
chr3 (56-96)||(35740830-35740870)
chr3 (41-93)||(49986856-49986907)
chr3 (41-96)||(3425973-3426027)
chr3 (41-154)||(20853961-20854074)
chr3 (41-91)||(14171586-14171635)
chr3 (41-82)||(21632900-21632940)
chr3 (56-97)||(35741908-35741949)
chr3 (56-97)||(36990983-36991024)
chr3 (56-97)||(37016423-37016464)
chr3 (42-99)||(45003496-45003552)
chr3 (41-97)||(3424773-3424828)
chr3 (150-190)||(16722251-16722291)
chr3 (45-93)||(17649337-17649384)
chr3 (150-190)||(30500119-30500159)
chr3 (41-93)||(33372732-33372783)
chr3 (56-95)||(38283563-38283602)
chr3 (43-154)||(52552953-52553065)
chr3 (156-190)||(5800865-5800899)
chr3 (41-91)||(17465697-17465746)
chr3 (119-179)||(11003882-11003943)
chr3 (109-154)||(14262104-14262149)
chr3 (109-154)||(19112833-19112878)
chr3 (109-154)||(20853764-20853809)
chr3 (150-186)||(9267053-9267089)
chr3 (150-186)||(14161949-14161985)
chr3 (150-190)||(14262114-14262154)
chr3 (41-93)||(17465366-17465417)
chr3 (158-190)||(19112851-19112883)
chr3 (41-93)||(43572718-43572769)
[»] chr7 (64 HSPs)
chr7 (42-154)||(20419536-20419649)
chr7 (120-222)||(23704812-23704915)
chr7 (41-154)||(23704926-23705039)
chr7 (119-212)||(20963629-20963723)
chr7 (41-153)||(20963760-20963872)
chr7 (145-222)||(20419660-20419737)
chr7 (41-154)||(28218428-28218542)
chr7 (41-154)||(41600223-41600337)
chr7 (41-97)||(28218177-28218232)
chr7 (138-222)||(44816959-44817043)
chr7 (119-212)||(31851373-31851467)
chr7 (145-222)||(20458815-20458892)
chr7 (41-97)||(12006540-12006595)
chr7 (42-97)||(20419861-20419915)
chr7 (145-212)||(41600092-41600159)
chr7 (42-91)||(23704662-23704710)
chr7 (42-154)||(38879989-38880099)
chr7 (41-97)||(20458691-20458746)
chr7 (43-94)||(44816832-44816884)
chr7 (41-97)||(48672603-48672658)
chr7 (42-97)||(6465855-6465909)
chr7 (145-212)||(12006674-12006741)
chr7 (42-155)||(16995200-16995313)
chr7 (109-191)||(24194931-24195014)
chr7 (42-154)||(23383499-23383613)
chr7 (156-222)||(25772487-25772553)
chr7 (42-154)||(38879723-38879837)
chr7 (41-154)||(12006805-12006919)
chr7 (145-222)||(23383624-23383701)
chr7 (41-154)||(23383765-23383879)
chr7 (42-95)||(24195198-24195250)
chr7 (42-95)||(41599958-41600010)
chr7 (41-94)||(48672276-48672328)
chr7 (41-97)||(10409697-10409752)
chr7 (41-97)||(14646974-14647029)
chr7 (41-89)||(20459022-20459069)
chr7 (41-93)||(25772363-25772414)
chr7 (119-222)||(38879848-38879952)
chr7 (43-94)||(7658292-7658342)
chr7 (145-212)||(10409551-10409618)
chr7 (145-212)||(48672413-48672480)
chr7 (138-212)||(33162705-33162779)
chr7 (41-95)||(33162862-33162915)
chr7 (150-212)||(48648395-48648457)
chr7 (119-191)||(6466004-6466077)
chr7 (41-94)||(31852157-31852209)
chr7 (45-97)||(7657972-7658023)
chr7 (41-97)||(25772655-25772710)
chr7 (119-186)||(28218323-28218391)
chr7 (119-212)||(1250340-1250434)
chr7 (56-94)||(1250533-1250571)
chr7 (110-152)||(31851506-31851548)
chr7 (109-154)||(1250471-1250516)
chr7 (41-94)||(6466132-6466184)
chr7 (56-97)||(20963507-20963548)
chr7 (109-154)||(20963563-20963608)
chr7 (56-97)||(23258248-23258289)
chr7 (109-154)||(24195061-24195106)
chr7 (109-154)||(28218247-28218292)
chr7 (41-97)||(14630335-14630390)
chr7 (150-186)||(23704925-23704961)
chr7 (61-97)||(33131651-33131687)
chr7 (150-186)||(38879802-38879838)
chr7 (43-95)||(48648263-48648314)
[»] chr6 (35 HSPs)
chr6 (119-222)||(26385402-26385506)
chr6 (41-154)||(32017769-32017882)
chr6 (119-212)||(30618112-30618205)
chr6 (42-154)||(9481182-9481295)
chr6 (41-97)||(24731934-24731989)
chr6 (41-154)||(18500314-18500427)
chr6 (119-193)||(3230016-3230091)
chr6 (41-95)||(18500655-18500708)
chr6 (56-97)||(10321746-10321787)
chr6 (145-222)||(24732115-24732192)
chr6 (145-222)||(33714611-33714688)
chr6 (45-97)||(26385598-26385649)
chr6 (42-95)||(26385278-26385330)
chr6 (151-212)||(32017670-32017731)
chr6 (41-93)||(2299641-2299692)
chr6 (119-186)||(17142798-17142866)
chr6 (135-222)||(18500438-18500526)
chr6 (41-154)||(30617966-30618075)
chr6 (56-154)||(9854152-9854250)
chr6 (41-84)||(24732274-24732316)
chr6 (56-91)||(33714496-33714531)
chr6 (55-97)||(2299352-2299394)
chr6 (56-97)||(21069527-21069568)
chr6 (145-205)||(2299451-2299511)
chr6 (43-95)||(19284130-19284181)
chr6 (55-95)||(34113591-34113631)
chr6 (150-212)||(33637709-33637772)
chr6 (109-154)||(19284197-19284242)
chr6 (109-154)||(24732203-24732248)
chr6 (109-154)||(26385346-26385391)
chr6 (56-93)||(30458913-30458950)
chr6 (109-154)||(33714555-33714600)
chr6 (55-99)||(15942459-15942503)
chr6 (150-186)||(18500392-18500428)
chr6 (150-186)||(32017768-32017804)
[»] chr2 (68 HSPs)
chr2 (119-212)||(22263325-22263419)
chr2 (42-154)||(23806217-23806330)
chr2 (150-222)||(26236277-26236349)
chr2 (41-154)||(19251470-19251583)
chr2 (145-215)||(15106244-15106314)
chr2 (119-212)||(23854800-23854894)
chr2 (41-154)||(17463356-17463470)
chr2 (42-99)||(17850587-17850643)
chr2 (119-215)||(23806102-23806199)
chr2 (40-154)||(26236360-26236474)
chr2 (222-294)||(33456426-33456498)
chr2 (145-212)||(19251647-19251714)
chr2 (56-154)||(26560569-26560667)
chr2 (119-212)||(26560688-26560782)
chr2 (42-154)||(15106332-15106443)
chr2 (41-94)||(17850913-17850965)
chr2 (41-94)||(22263520-22263572)
chr2 (145-222)||(26135994-26136071)
chr2 (41-97)||(19251793-19251848)
chr2 (42-150)||(23854688-23854797)
chr2 (42-90)||(23855025-23855072)
chr2 (150-222)||(30390583-30390655)
chr2 (56-99)||(12419044-12419087)
chr2 (56-99)||(12431104-12431147)
chr2 (39-97)||(39878100-39878156)
chr2 (119-197)||(39878252-39878331)
chr2 (42-97)||(42670717-42670771)
chr2 (145-204)||(42670861-42670920)
chr2 (56-94)||(13254763-13254801)
chr2 (56-97)||(26135830-26135871)
chr2 (43-96)||(26560880-26560932)
chr2 (145-217)||(13284537-13284609)
chr2 (41-97)||(20498746-20498801)
chr2 (56-154)||(22263205-22263304)
chr2 (41-97)||(26236126-26236181)
chr2 (145-212)||(20498922-20498989)
chr2 (56-95)||(30959997-30960036)
chr2 (42-97)||(42671043-42671097)
chr2 (56-94)||(17463105-17463143)
chr2 (119-212)||(17463241-17463335)
chr2 (41-99)||(23046706-23046763)
chr2 (55-97)||(33290061-33290103)
chr2 (56-97)||(13284737-13284778)
chr2 (41-90)||(23047913-23047961)
chr2 (42-95)||(26136143-26136195)
chr2 (56-97)||(30958697-30958738)
chr2 (145-214)||(33290226-33290295)
chr2 (41-90)||(44097737-44097786)
chr2 (150-190)||(22263269-22263309)
chr2 (110-154)||(30390528-30390572)
chr2 (41-92)||(13284411-13284461)
chr2 (42-97)||(15106067-15106121)
chr2 (156-191)||(33290133-33290168)
chr2 (56-154)||(33290314-33290412)
chr2 (42-97)||(34548574-34548628)
chr2 (42-97)||(39878397-39878450)
chr2 (112-154)||(22263456-22263498)
chr2 (156-190)||(42670803-42670837)
chr2 (109-154)||(17850851-17850896)
chr2 (56-97)||(30390472-30390513)
chr2 (41-97)||(13254496-13254551)
chr2 (150-186)||(19251548-19251584)
chr2 (150-186)||(22263455-22263491)
chr2 (150-186)||(23806216-23806252)
chr2 (150-190)||(26560632-26560672)
chr2 (150-186)||(30390537-30390573)
chr2 (110-154)||(42670788-42670832)
chr2 (42-90)||(44098953-44099000)
[»] scaffold0117 (1 HSPs)
scaffold0117 (47-153)||(12248-12355)
[»] scaffold0361 (3 HSPs)
scaffold0361 (145-222)||(4740-4817)
scaffold0361 (41-154)||(4828-4941)
scaffold0361 (41-97)||(4561-4616)
[»] scaffold0449 (2 HSPs)
scaffold0449 (41-97)||(7524-7579)
scaffold0449 (43-154)||(7227-7339)
[»] scaffold0185 (2 HSPs)
scaffold0185 (41-97)||(3868-3923)
scaffold0185 (145-212)||(4003-4070)
[»] scaffold0809 (3 HSPs)
scaffold0809 (40-99)||(1728-1786)
scaffold0809 (145-212)||(1587-1654)
scaffold0809 (41-97)||(1410-1465)
[»] scaffold0141 (2 HSPs)
scaffold0141 (41-96)||(8324-8378)
scaffold0141 (42-97)||(8646-8700)
[»] scaffold0477 (4 HSPs)
scaffold0477 (41-95)||(4879-4932)
scaffold0477 (156-222)||(4935-5002)
scaffold0477 (56-95)||(5073-5112)
scaffold0477 (109-154)||(5013-5058)
[»] scaffold0352 (3 HSPs)
scaffold0352 (41-99)||(4666-4723)
scaffold0352 (41-97)||(6003-6058)
scaffold0352 (150-187)||(4745-4782)
[»] scaffold0881 (3 HSPs)
scaffold0881 (145-206)||(360-421)
scaffold0881 (41-93)||(218-269)
scaffold0881 (41-97)||(541-596)
[»] scaffold0176 (1 HSPs)
scaffold0176 (41-94)||(15955-16007)
[»] scaffold0157 (1 HSPs)
scaffold0157 (56-99)||(224-267)


Alignment Details
Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 222 - 521
Target Start/End: Complemental strand, 36342938 - 36342638
Alignment:
Q  222 tccaatcatccattgaaacgcgaatatctccttcatgataatcacaaacccaagcaagtgaatcttcaggcgggattaagggtgttcgaacacttgagtt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36342938 tccaatcatccattgaaacgcgaatatctccttcatgataatcacaaacccaagcaagtgaatcttcaggcgggattaagggtgttctaacacttgagtt 36342839  T
Q  322 tcaattatttgttcaatattatag-nnnnnnnnnnatggctttatctaattcttatcataatatgttctgtttcttataatgaactaatgtactcaaaat 420  Q
    ||||||||||||||||||||||||           ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36342838 tcaattatttgttcaatattatagtttttttttttatgtctttatctaatttttatcataatatgttctgtttcttataatgaactaatgtactcaaaat 36342739  T
Q  421 tttaattaatgtgatcttcatttgattctaataaaatnnnnnnnnctgaacagaaactataagcatgcatacttgatctctacttccccttgcttgtatg 520  Q
    ||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36342738 tttaattaatgtgatcttcatttgattctaatataataaaaaaaactgaacagaaactataagcatgcatacttgatctttacttccccttgcttgtatg 36342639  T
Q  521 t 521  Q
    |    
T  36342638 t 36342638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 7126145 - 7126051
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| ||||||| ||| | |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  7126145 gtccctgtaatttcatattcctcccacttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagatt 7126051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 14143901 - 14144011
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |          ||||||||| |||||||||||| ||||||||    
T  14143901 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattct 14143999  T
Q  140 tccatttttggt 151  Q
    |||| |||||||    
T  14144000 tccacttttggt 14144011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 14144051 - 14144145
Alignment:
Q  119 gtccctgtaattccatattc-ttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| || |||| ||||| |||||||||  ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  14144051 gtccctgtaatttcagattccttccacttttggtccatgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagatt 14144145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 14411696 - 14411751
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14411696 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 14411751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 17762282 - 17762337
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17762282 agggtaaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccct 17762337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 23979279 - 23979166
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| || |||||    
T  23979279 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattct 23979181  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  23979180 tccacttttggtccc 23979166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 24650926 - 24650831
Alignment:
Q  120 tccctgtaattccatattcttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttg 215  Q
    ||||||||||| ||||||  |||   ||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||| ||||||| ||||||||    
T  24650926 tccctgtaatttcatatttctcccactttggtccctgtaatttcagattcctccatttttggtccctcattttacgtgccatgtatgcagattttg 24650831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 20709439 - 20709346
Alignment:
Q  120 tccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    ||||||||||| || |||| ||| | ||||| |||| |||||||||||||||||||||||| |||||| ||||||||||| ||||||| |||||    
T  20709439 tccctgtaatttcagattcctcccacttttgatccctgtaatttcatattcctccactttttgtccctcattttacgtgccatgtatgcagatt 20709346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 24837168 - 24837282
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||  ||          ||||||||| |||| ||||||| |||||||    
T  24837168 agggtaaatacctctttt-cgtccctgtaataatagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattc 24837266  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  24837267 ttccacttttggtccc 24837282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 154
Target Start/End: Original strand, 993751 - 993860
Alignment:
Q  43 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttcc 142  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||||||||||||| |          ||||||||||||| ||||||| |||||||||||    
T  993751 ggtaaatacttctttt-cgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaaa-ttagatttagtccttgtaatttcatattcttcc 993848  T
Q  143 atttttggtccc 154  Q
    | ||||||||||    
T  993849 acttttggtccc 993860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 993974 - 993871
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtt 217  Q
    |||||||||||| || |||| ||| | |||||||||| |||||| |||||||||||||||||||||||| ||||||||||  ||||||| ||||| || |    
T  993974 gtccctgtaatttcagattcctcccacttttggtccctgtaatt-catattcctccacttttggtccctcattttacgtgtcatgtatgcagattctgct 993876  T
Q  218 tacgt 222  Q
    |||||    
T  993875 tacgt 993871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 41001729 - 41001678
Alignment:
Q  43 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41001729 ggtaaatacct-tttttcgtccctgtaatattagcgaattccggttttagtcc 41001678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 24837547 - 24837493
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  24837547 gggtaaatacctctttt-cgtccctgtaatattagcgaattccagttttagtccct 24837493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 24651078 - 24651025
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  24651078 agggtaaatacctctttt-cgtctctgtaatattagcgaattccggttttagtcc 24651025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 7126296 - 7126244
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  7126296 agggtaaatacctctttt-catccctgtaatattagcgaattccggttttagtc 7126244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 24074302 - 24074416
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||  ||          ||||||||| ||| |||||||| |||||||    
T  24074302 agggtaaatacctctttt-cgtccatgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatattc 24074400  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  24074401 ttccacttttggtccc 24074416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 153
Target Start/End: Original strand, 41001370 - 41001465
Alignment:
Q  57 tttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtcc 153  Q
    |||||||||||||||||||||||||| |||||||||||||| |          |||||||| |||||||||||| |||||||||||| |||||||||    
T  41001370 tttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaa-ttagattttgtccctgtaatttcatattcttccacttttggtcc 41001465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 119 - 206
Target Start/End: Complemental strand, 4919218 - 4919130
Alignment:
Q  119 gtccctgtaattccatattcttccat-ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 206  Q
    |||| ||||||| ||||||| ||||  |||||||| | ||||||||| ||||||||||||||||||||| ||||||||| | |||||||    
T  4919218 gtccttgtaatttcatattcctccaacttttggtcactgtaatttcaaattcctccacttttggtccctcattttacgtaccatgtatg 4919130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 6817122 - 6817177
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  6817122 agggtaaatacctctttt-cgtccttgtaatattagtgaattccggttttagtccct 6817177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 6817312 - 6817256
Alignment:
Q  156 gtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| ||||||| |||||    
T  6817312 gtaatttcagattcctccatttttggtcccttattttacgtgccatgtatgcagatt 6817256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 17762661 - 17762606
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||    
T  17762661 agggtaaatacctctttt-cgtccctgtagtattagcgaattctggttttagtccct 17762606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 31799640 - 31799753
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||  ||          ||||||||| |||||||||||| || |||||    
T  31799640 gggtaaatacctctttt-cgtccctataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 31799738  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  31799739 tccacttttggtccc 31799753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 18336833 - 18336780
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  18336833 gggtaaatacctctttt-cgtccctgtaa-attagcgaattccggttttagtccct 18336780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 27159327 - 27159222
Alignment:
Q  47 aatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttccattt 146  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||||||| | |         ||||||||| ||||||||||||  ||||||||||||||    
T  27159327 aatacctctttt-cgtccttgtaatattagcgaatttcggttttagtccttgtaaaaaaaa-tttagattttgtccctgtaattttatattcttccattt 27159230  T
Q  147 ttggtccc 154  Q
    ||||||||    
T  27159229 ttggtccc 27159222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 31800018 - 31799965
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  31800018 agggaaaatacctctttt-cgtccctataatattagcgaattccggttttagtcc 31799965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 24837370 - 24837293
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    |||||||||| ||||||||| ||||||||||||||| ||||| ||||||||| | ||||||  ||||| || ||||||    
T  24837370 ttttggtccctgtaatttcagattcctccacttttgatccctcattttacgtaccatgtatacagattctgcttacgt 24837293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 17762432 - 17762520
Alignment:
Q  119 gtccctgtaattccatattcttccat-ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 206  Q
    |||||||||||| ||||||| |||   |||||||||| ||||||| | ||||||||||||||||||||| |||||| || | |||||||    
T  17762432 gtccctgtaatttcatattcctcccgcttttggtccctgtaattttagattcctccacttttggtccctcattttatgtcccatgtatg 17762520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 31799841 - 31799781
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtat 205  Q
    |||||||||| ||||||||| | ||||||||||||||||||| ||||||| ||| ||||||    
T  31799841 ttttggtccctgtaatttcaaaatcctccacttttggtccctcattttacatgccatgtat 31799781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 41001551 - 41001487
Alignment:
Q  148 tggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    ||||||| ||||||||| ||||||||| |||| |||||| ||||||||||| ||||||| |||||    
T  41001551 tggtccctgtaatttcagattcctccatttttagtccctcattttacgtgccatgtatgcagatt 41001487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 4918988 - 4919103
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn---tttagatttagtccctgtaattccatatt 137  Q
    |||||||||||||||||| | || |||||||||||||||||| |||||||||| ||| |            ||||||||| |||||||||||| ||||||    
T  4918988 agggtaaatacctctttt-catctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatatt 4919086  T
Q  138 cttccatttttggtccc 154  Q
    |||||| ||||||||||    
T  4919087 cttccacttttggtccc 4919103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 18336467 - 18336521
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||| |||||||||||    
T  18336467 gggtaaatatctctttt-cgtccctataatattagcgaattccgattttagtccct 18336521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 18336638 - 18336685
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtcccttattttacgtg 197  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  18336638 gtccctgtaatttcagattcctccacttttggtccctcattttacgtg 18336685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 29445170 - 29445131
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  29445170 ttttcgtccctgtaatattagcgaattccagttttagtcc 29445131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 4919366 - 4919317
Alignment:
Q  43 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 93  Q
    |||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  4919366 ggtaaatacctctttt-cgtctctggaatattagcgaattccggttttagt 4919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 7125923 - 7125972
Alignment:
Q  47 aatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||| ||| |||||||||||||||||||||| |||||||||||    
T  7125923 aatacctctttt-cgttcctgtaatattagcgaattccgattttagtccct 7125972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 7126227 - 7126182
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||    
T  7126227 tttagattttgtccctgtaatttcatattcttccacttttggtccc 7126182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 14144280 - 14144166
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    ||||| |||||||||||| |||| ||||||||||| ||||||||| ||||||||||  ||          ||||||||| |||||||||||| || ||||    
T  14144280 agggttaatacctctttt-cgtcactgtaatattaacgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattc 14144182  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  14144181 ttccacttttggtccc 14144166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 14411847 - 14411920
Alignment:
Q  150 gtcccagtaatttcatattcctcc-acttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    ||||| ||||||||| |||||||| ||||||||||||| ||||||||||  ||||||| ||||| || ||||||    
T  14411847 gtccctgtaatttcagattcctcccacttttggtccctcattttacgtgtcatgtatgtagattctgcttacgt 14411920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 24074490 - 24074546
Alignment:
Q  156 gtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||| || |||| |||||    
T  24074490 gtaatttcaaatttctccacttttggtccctcattttacgtgccatatatgcagatt 24074546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 24650704 - 24650810
Alignment:
Q  44 gtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttcca 143  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||||| ||  | |         ||||||||| || ||||||||| ||||||||||||    
T  24650704 gtaaatacctctttt-cgtccctgtaatattaacgaatttcggttttaatctatgtaaaaaaagatttagattttgttcctgtaatttcatattcttcca 24650802  T
Q  144 tttttggt 151  Q
     |||||||    
T  24650803 cttttggt 24650810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 30512287 - 30512342
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||| ||||||| ||||||||||||||||| |||||  |||||||||||||    
T  30512287 agggtaaatatctctttt-cgtccctgtaatattagtgaattttggttttagtccct 30512342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 30552627 - 30552682
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||| ||||||| ||||||||||||||||| |||||  |||||||||||||    
T  30552627 agggtaaatatctctttt-cgtccctgtaatattagtgaattttggttttagtccct 30552682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 152
Target Start/End: Complemental strand, 6817431 - 6817388
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtc 152  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  6817431 tttagattttgtccctgtaatttcatattcttccacttttggtc 6817388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 191
Target Start/End: Complemental strand, 24074596 - 24074561
Alignment:
Q  156 gtaatttcatattcctccacttttggtcccttattt 191  Q
    |||||||||||||| |||||||||||||||||||||    
T  24074596 gtaatttcatattcttccacttttggtcccttattt 24074561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 994123 - 994011
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    |||||||||||| ||||  ||||| |||||| ||||||||| |||||||||||||  ||          ||||||||| |||||||||||| || |||||    
T  994123 gggtaaatacctttttt--gtccccgtaataatagcgaatttcggttttagtccctgtagaataaaagatttagattttgtccctgtaattgcagattct 994026  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  994025 tccacttttggtccc 994011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 22571090 - 22571131
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||| |||| |||||||||||||||||||| |||||||||||    
T  22571090 tttttgtccttgtaatattagcgaattccgattttagtccct 22571131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 24074612 - 24074567
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  24074612 tttagattttgtccttgtaatttcatattcttccacttttggtccc 24074567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 27158990 - 27159042
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    ||||| |||||||||||| ||||| ||||||||||||||||| | |||||||||    
T  27158990 agggttaatacctctttt-cgtccatgtaatattagcgaatttcagttttagtc 27159042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 29444819 - 29444860
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||||| ||||||| | |||||||||||    
T  29444819 ttttcgtccctgtaatattaacgaattctgattttagtccct 29444860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 4919068 - 4919104
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  4919068 gtccctgtaatttcatattcttccacttttggtccct 4919104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 7126217 - 7126181
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  7126217 gtccctgtaatttcatattcttccacttttggtccct 7126181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 14144201 - 14144161
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtcccttatt 190  Q
    ||||| ||||||||| |||| ||||||||||||||||||||    
T  14144201 gtccctgtaatttcaaattcttccacttttggtcccttatt 14144161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 14412044 - 14411989
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| | || || |||||||| |||||| ||||||||||||||    
T  14412044 agggtaaatacctctttt-catctctataatattaacgaatttcggttttagtccct 14411989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 20709590 - 20709535
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||| |||||||||||| ||||| |||||||||| ||||||  |||||||||||||    
T  20709590 agggttaatacctctttt-cgtccatgtaatattaacgaattttggttttagtccct 20709535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 27159068 - 27159108
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtcccttatt 190  Q
    ||||| ||||||||| |||| ||||||||||||||||||||    
T  27159068 gtccctgtaatttcagattcttccacttttggtcccttatt 27159108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 31799718 - 31799758
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtcccttatt 190  Q
    ||||| ||||||||| |||| ||||||||||||||||||||    
T  31799718 gtccctgtaatttcagattcttccacttttggtcccttatt 31799758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 41 - 212
Target Start/End: Original strand, 48259822 - 48259995
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn--tttagatttagtccctgtaattccatattc 138  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||| |           ||||||||| |||| ||||||| || ||||    
T  48259822 agggtaaatatctctttt-cgtccctgtaatattagcgaattccggttttaatccctgtaaataaaaagatttagattttgtccatgtaatttcagattc 48259920  T
Q  139 ttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
     ||| | |||||||||| || |||||| ||||||||||||||| ||||| ||||||||||| ||||||| |||||    
T  48259921 ctcctacttttggtccctgttatttcagattcctccacttttgatccctcattttacgtgccatgtatgcagatt 48259995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 37012935 - 37012841
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| ||||||||||| | |||||||||  ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  37012935 gtccctgtaatttcatattcttcctacttttggtccttgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagatt 37012841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 31218360 - 31218305
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31218360 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 31218305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 7819191 - 7819258
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  7819191 ttttggtccatgtaatttcatattcctccacttttggtccctcattttacgtgccatgtatgcagatt 7819258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 9396849 - 9396943
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| || |||| ||| | ||||| |||| ||||||||||||||||||||||||||||||| ||||||||||  ||||||| |||||    
T  9396849 gtccctgtaatttcagattcctcccacttttgatccctgtaatttcatattcctccacttttggtccctcattttacgtgtcatgtatgcagatt 9396943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 18667439 - 18667533
Alignment:
Q  119 gtccctgtaattccatattcttccat-ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| || |||| ||||  |||||||||| ||||||| | ||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  18667439 gtccctgtaatttcagattcctccaacttttggtccctgtaattttaaattcctccacttttggtccctcattttacgtgccatgtatgcagatt 18667533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 38574196 - 38574102
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| || |||| ||| | |||||||| | ||||||||||||||||||||||||||||||| ||||||| ||| ||||||| |||||    
T  38574196 gtccctgtaatttcagattcctcccacttttggtctctgtaatttcatattcctccacttttggtccctcattttacatgccatgtatgcagatt 38574102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 154
Target Start/End: Complemental strand, 38574343 - 38574233
Alignment:
Q  45 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattcttcc 142  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||          ||||||||| |||||||||||| |||||||||||    
T  38574343 taaatacct-tttttcgtccctgtaatattagcgaattctggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcatattcttcc 38574245  T
Q  143 atttttggtccc 154  Q
    | ||||||||||    
T  38574244 acttttggtccc 38574233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 46046802 - 46046748
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  46046802 agggtaaatacct--ttttcgtccctgtaatattagcgaattccggttttagtccct 46046748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 9619129 - 9619209
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgc 198  Q
    |||||||||||| ||||||| ||| |||||||||||| ||||||||| ||||||||||||||| |||||  ||||||||||    
T  9619129 gtccctgtaatttcatattcctcccatttttggtccctgtaatttcagattcctccacttttgctccctctttttacgtgc 9619209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 9619358 - 9619303
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  9619358 agggtaaatacctcttttt-gtccctgtaatattagcgaattctggttttagtccct 9619303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 41946964 - 41947019
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  41946964 agggtaaatacctctttt-cgtccctgtaatattagtgaattccggttttagtccct 41947019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 46046429 - 46046484
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  46046429 agggtaaatacct-tttttcgtccctgtaatattagcgaattccgattttagtccct 46046484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 45 - 154
Target Start/End: Original strand, 3018014 - 3018125
Alignment:
Q  45 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn---tttagatttagtccctgtaattccatattcttc 141  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||  |            ||||||||| |||||||||||| ||||||||||    
T  3018014 taaatacctctttt-cgtccctgtaatattagcgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 3018112  T
Q  142 catttttggtccc 154  Q
    || ||||||||||    
T  3018113 cacttttggtccc 3018125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 46046625 - 46046558
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||| ||||||| |||||    
T  46046625 ttttggtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgtatgcagatt 46046558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 9516811 - 9516734
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||||||   ||||||| ||||| || ||||||    
T  9516811 ttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtatcatgtatgcagattctgcttacgt 9516734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 31944127 - 31944204
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    |||||||||  ||||||||| ||||||||||||||||||||| ||||||||||| | ||||| ||||| |||| ||||    
T  31944127 ttttggtccatgtaatttcagattcctccacttttggtccctcattttacgtgccaagtatgcagattctgttgacgt 31944204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 37013085 - 37012974
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    |||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||| |           |||||||| |||||||||||| ||||||||    
T  37013085 agggtaaatacctcattt-cgtccctgtaatattagcgaattctggttttagtccctgtataaaaaaaaattagattttgtccctgtaatttcatattct 37012987  T
Q  140 tccatttttggtc 152  Q
    |||| ||||||||    
T  37012986 tccacttttggtc 37012974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 9397077 - 9397022
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||    
T  9397077 agggtaaatacttctttt-cgtccctgtaatattagcaaattccggttttagtccct 9397022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 9516611 - 9516662
Alignment:
Q  43 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  9516611 ggtaaatatctctttt-cgtccctgtaatattagcgaattccggttttagtcc 9516662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 56 - 154
Target Start/End: Original strand, 15640729 - 15640828
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    |||||||||||||||||||||||||||||||||||||| ||| |          ||||||||| |||||||||||| ||||||||| || ||||||||||    
T  15640729 ttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaagatttagattttgtccctgtaatttcatattctttcacttttggtccc 15640828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 26252615 - 26252502
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||  ||          ||||||||| |||||||||||| ||||||||    
T  26252615 gggtaaatatctctttt-cgtccctgtaatattagcgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 26252517  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  26252516 tccacttttggtccc 26252502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 38573967 - 38574081
Alignment:
Q  40 gagggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    ||||||||||||||||||| ||||| ||||||||||| |||||||| ||||| ||||| |          ||||||||| |||||||||||| |||||||    
T  38573967 gagggtaaatacctctttt-cgtccatgtaatattagtgaattccgattttaatccctgtaaaaaaaagatttagattttgtccctgtaatttcatattc 38574065  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  38574066 ttccacttttggtccc 38574081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 3018189 - 3018256
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    ||||||||||  |||||||| ||||||||||||||||||||| ||||||||||  ||||||| |||||    
T  3018189 ttttggtccctataatttcaaattcctccacttttggtccctcattttacgtgtcatgtatgcagatt 3018256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 3273620 - 3273735
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnnttt---agatttagtccctgtaattccatatt 137  Q
    |||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||  |         |||   |||||| |||||||||||| ||||||    
T  3273620 agggtaaatatctctttt-cgtccctgtaatattagcgaattccgattttagtccccgtaatttttttttttatagattttgtccctgtaatttcatatt 3273718  T
Q  138 cttccatttttggtccc 154  Q
    |||||| ||||||||||    
T  3273719 cttccacttttggtccc 3273735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 4356058 - 4356125
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||  ||||||||| ||||||||||||||||||||| ||||||||||  ||||||| |||||    
T  4356058 ttttggtccttgtaatttcaaattcctccacttttggtccctcattttacgtgtcatgtatgcagatt 4356125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 34064183 - 34064116
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||| ||||||||| |||||||||||||| |||||| ||||||| ||| ||||||| |||||    
T  34064183 ttttggtccctgtaatttcagattcctccacttttagtccctcattttacatgccatgtatgtagatt 34064116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 56 - 154
Target Start/End: Original strand, 9618993 - 9619093
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtcc 153  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| || ||||||||| |||||||||    
T  9618993 ttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagattcttccacttttggtcc 9619092  T
Q  154 c 154  Q
    |    
T  9619093 c 9619093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 18713110 - 18713204
Alignment:
Q  119 gtccctgtaattccatattcttccat-ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| || |||| ||| | |||||||||  ||||||||| ||||||| ||||||||||||| | ||||||| ||||||||| |||||    
T  18713110 gtccctgtaatttcagattcctccctcttttggtccatgtaatttcaaattcctcaacttttggtccctcagtttacgttcaatgtatgtagatt 18713204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 31090271 - 31090201
Alignment:
Q  136 ttcttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 206  Q
    |||| ||| |||||||||| ||||||||| ||||||||||||||||||| | ||||||||| | |||||||    
T  31090271 ttctcccacttttggtccccgtaatttcagattcctccacttttggtccttcattttacgtaccatgtatg 31090201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 31943962 - 31944061
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct---atnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtc 152  Q
    |||||||||||||||||||||||||||||||||||||| |||   |          ||||||||| |||||||||||| |||||||||||| ||||||||    
T  31943962 ttttcgtccctgtaatattagcgaattccggttttagttcctgtaaataaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtc 31944061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 35376164 - 35376217
Alignment:
Q  43 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  35376164 ggtaaatacctatttt-cgtccctgtaatattagcgaattctggttttagtccct 35376217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 3273996 - 3273941
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 99  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||    
T  3273996 gggtaaatacctctttt-cgtccc-gtaatattagcgaatttcggttttagtccctat 3273941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 26252418 - 26252491
Alignment:
Q  150 gtcccagtaatttcatattcctcc-acttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    ||||| ||||||||| |||||||| ||||||||||||| ||||||||||| ||||||| ||||| || ||||||    
T  26252418 gtccctgtaatttcagattcctcccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgt 26252491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 41947232 - 41947180
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    ||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  41947232 gggtaaatatctctttt-cgtccctgtaatattagcgaatttcggttttagtcc 41947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 9516988 - 9516937
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||||||||    
T  9516988 gggtaaatatctctttt-cgtccctgtaatattagcgaatttcggttttagtc 9516937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 31090440 - 31090385
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||| ||||||| ||||||||||||||||||||||| || |||||||||||    
T  31090440 agggtaaatatctctttt-cgtccctgtaatattagcgaatttcgattttagtccct 31090385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 48580239 - 48580196
Alignment:
Q  47 aatacctctttttcgtccctgtaatattagcgaattccggtttta 91  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  48580239 aatacctctttt-cgtccctgtaatattagcgaattccggtttta 48580196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 48580055 - 48580000
Alignment:
Q  157 taatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||| ||||||||||||||| ||||| ||||||||||| ||||||| |||||    
T  48580055 taatttcaaattcctccacttttgctccctcattttacgtgccatgtatgtagatt 48580000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 13132318 - 13132265
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    ||||||||||||| |||| ||||||||||||||||||||||| || |||||||||    
T  13132318 agggtaaatacctatttt-cgtccctgtaatattagcgaatttcgattttagtcc 13132265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 18667669 - 18667620
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggtttta 91  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| ||||||    
T  18667669 agggttaatacctctttt-cgtccctgtaatattagcgaattccagtttta 18667620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 31090060 - 31090174
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn---tttagatttagtccctgtaattccatattc 138  Q
    |||||||||| ||||||| |||||||||||||||| ||||| || ||||||||||| |            ||||||||| |||||||||||| |||||||    
T  31090060 gggtaaatacttcttttt-gtccctgtaatattagtgaatttcgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattc 31090158  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  31090159 ttccacttttggtccc 31090174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 34063983 - 34064036
Alignment:
Q  43 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||| |||||||||||||||| |||||||  ||||||||||||    
T  34063983 ggtaaatacctctttt-cgtccctgtaatattaacgaattctagttttagtccct 34064036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 3018375 - 3018334
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  3018375 ttttcgtccctgtaatattaacgaatttcggttttagtccct 3018334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 7819399 - 7819347
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    |||||||||| || ||||||||||| |||||||||||||||| |||||||||||    
T  7819399 agggtaaatatct-tttttcgtcccggtaatattagcgaatttcggttttagtc 7819347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 9396702 - 9396750
Alignment:
Q  45 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||||    
T  9396702 taaatacctctttt-cgtccctgtaatattagcgaatttcgattttagtc 9396750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 31944329 - 31944277
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    ||||||||||| |||||| ||||| ||||||||||||||||| |||||||||||    
T  31944329 agggtaaatacttctttt-cgtccttgtaatattagcgaatttcggttttagtc 31944277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 35376492 - 35376451
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||||||| |||||| ||||||||||||    
T  35376492 ttttcgtccctgtaatattagcaaattccagttttagtccct 35376451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 12904746 - 12904801
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||| ||||||| ||||||| |||||||||||||||  |||||||||||||    
T  12904746 agggtaaatatctctttt-cgtccctataatattagcgaattttggttttagtccct 12904801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 15640865 - 15640953
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 206  Q
    |||||||||||| || |||| ||| | ||||| |||  ||||||||| ||||||||||||||||||| | ||||||||||  |||||||    
T  15640865 gtccctgtaatttcagattcctcccacttttgatccttgtaatttcagattcctccacttttggtccatcattttacgtgtcatgtatg 15640953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 15641093 - 15641046
Alignment:
Q  43 ggtaaatacctctttttcgtccctgtaatattagcgaattccggtttta 91  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||||||||    
T  15641093 ggtaaatacctctttt-cgtccttgtaatattagtgaattccggtttta 15641046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 36887679 - 36887734
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||| ||||||||||||  ||||||||||||||||||||||  |||||||||||||    
T  36887679 agggttaatacctcttttg-gtccctgtaatattagcgaattttggttttagtccct 36887734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 12520650 - 12520693
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccctat 99  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||    
T  12520650 ttttagtccctataatattagcgaattccagttttagtccctat 12520693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 90
Target Start/End: Complemental strand, 31083462 - 31083428
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggtttt 90  Q
    |||||||||||||||||| ||||||||||||||||    
T  31083462 ttttcgtccctgtaatatgagcgaattccggtttt 31083428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 7819018 - 7819066
Alignment:
Q  45 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    |||||||||||||| || || | |||||||||||||||||||||||||||    
T  7819018 taaatacctctttt-cgaccatataatattagcgaattccggttttagtc 7819066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 9516678 - 9516723
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  9516678 tttagattttgtccttgtaatttcatattcttccacttttggtccc 9516723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 13132241 - 13132204
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccctt 187  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  13132241 gtccctgtaatttcatattcttccacttttggtccctt 13132204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 13132251 - 13132206
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||  |||||||||||| |||||||||||| ||||||||||    
T  13132251 tttagattctgtccctgtaatttcatattcttccacttttggtccc 13132206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 18713028 - 18713073
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| |||||||||||| |||||| ||||| ||||||||||    
T  18713028 tttagattttgtccctgtaatttcatattgttccaattttggtccc 18713073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 20069663 - 20069622
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| |||||||||| ||||| ||||||    
T  20069663 ttttcgtccctgtaatatgagcgaattccagttttggtccct 20069622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 37012775 - 37012820
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| |||||||||||| || ||||||||| ||||||||||    
T  37012775 tttagattttgtccctgtaatttcagattcttccacttttggtccc 37012820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 43313576 - 43313535
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||| ||| ||||||||||||||||||| |||||||||||||    
T  43313576 ttttggtctctgtaatattagcgaattctggttttagtccct 43313535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 48580176 - 48580131
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| |||||||||||| |||||| ||||| ||||||||||    
T  48580176 tttagattttgtccctgtaatttcatattgttccacttttggtccc 48580131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 51029138 - 51029097
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||| ||||||||||||| |||||||| ||||||||||||||    
T  51029138 ttttggtccctgtaatatgagcgaatttcggttttagtccct 51029097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 3018090 - 3018126
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  3018090 gtccctgtaatttcatattcttccacttttggtccct 3018126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 3273700 - 3273736
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  3273700 gtccctgtaatttcatattcttccacttttggtccct 3273736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 4356253 - 4356210
Alignment:
Q  47 aatacctctttttcgtccctgtaatattagcgaattccggtttta 91  Q
    |||||||||||| | ||||||||||||||||||||| ||||||||    
T  4356253 aatacctctttt-catccctgtaatattagcgaatttcggtttta 4356210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 9619289 - 9619245
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtcc 153  Q
    ||||||||| |||| ||||||| |||||||||||| |||||||||    
T  9619289 tttagattttgtccttgtaatttcatattcttccacttttggtcc 9619245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 13131943 - 13131994
Alignment:
Q  45 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||| ||||| |||||||||| |||||| | ||||||||||||    
T  13131943 taaatacctctttt-cgtccttgtaatattaacgaatttctgttttagtccct 13131994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 26252337 - 26252381
Alignment:
Q  110 ttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    |||||||| |||||||||||| || ||||||||| ||||||||||    
T  26252337 ttagattttgtccctgtaatttcagattcttccacttttggtccc 26252381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 31090139 - 31090175
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  31090139 gtccctgtaatttcatattcttccacttttggtccct 31090175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 37012785 - 37012825
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtcccttatt 190  Q
    ||||| ||||||||| |||| ||||||||||||||||||||    
T  37012785 gtccctgtaatttcagattcttccacttttggtcccttatt 37012825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 38574046 - 38574082
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38574046 gtccctgtaatttcatattcttccacttttggtccct 38574082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 38574268 - 38574232
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38574268 gtccctgtaatttcatattcttccacttttggtccct 38574232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 97
Target Start/End: Original strand, 43312227 - 43312263
Alignment:
Q  61 gtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  43312227 gtccctgtaatattagcaaattccgattttagtccct 43312263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 53896468 - 53896500
Alignment:
Q  65 ctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||| |||||||||||||||||||||||    
T  53896468 ctgtaatatgagcgaattccggttttagtccct 53896500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 6e-23; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 18462285 - 18462398
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |          ||||||||| |||||||||||| || |||||    
T  18462285 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattct 18462383  T
Q  140 tccatttttggtccc 154  Q
    |||||||||||||||    
T  18462384 tccatttttggtccc 18462398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 17606458 - 17606555
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttg 215  Q
    |||||||||||| ||||||| ||| | |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| | ||||||    
T  17606458 gtccctgtaatttcatattcctcccacttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcaaattttg 17606555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 17606685 - 17606573
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattctt 140  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |         ||||||||| |||| ||||||| || ||||||    
T  17606685 agggttaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaagatttagattttgtccttgtaatttcagattctt 17606587  T
Q  141 ccatttttggtccc 154  Q
    ||| ||||||||||    
T  17606586 ccacttttggtccc 17606573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 39711451 - 39711337
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||  ||          ||||||||| ||||| |||||| |||||||    
T  39711451 agggtaaatacctctttt-cgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccgtaatttcatattc 39711353  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  39711352 ttccacttttggtccc 39711337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 33629069 - 33629014
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33629069 agggttaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccct 33629014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 121 - 212
Target Start/End: Complemental strand, 42510240 - 42510148
Alignment:
Q  121 ccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||||||||||||||| |||| |||||| ||||||| |||||    
T  42510240 ccctgtaatttcagattcctcccacttttggtccctgtaatttcagattcctccacttttggtccctcatttcacgtgccatgtatgcagatt 42510148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 18342395 - 18342341
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  18342395 gggtaaatacct-tttttcgtccctgtaatattagcgaatttcggttttagtccct 18342341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 33628689 - 33628743
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc 96  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  33628689 agggtaaatacctctttt-cgtccctgtaatattagcgaattctggttttagtccc 33628743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 39826251 - 39826184
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    ||||| |||| ||||||||||||||||||||||||| ||||| ||||||||||| ||||||| |||||    
T  39826251 ttttgatccctgtaatttcatattcctccacttttgatccctcattttacgtgccatgtatgcagatt 39826184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 48072111 - 48072205
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| || |||| ||| | ||||| |||| ||||||||| ||||||||||||||||||||| ||||||||||  ||||||| |||||    
T  48072111 gtccctgtaatttcaaattcctcccacttttgatccctgtaatttcagattcctccacttttggtccctcattttacgtgacatgtatgcagatt 48072205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 4906961 - 4907075
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  4906961 agggtaaatacctctttt-cgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaatgatttagattttgtccctgtaatttcatattc 4907059  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  4907060 ttccacttttggtccc 4907075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 29696564 - 29696616
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  29696564 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtc 29696616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 33628891 - 33628830
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 206  Q
    |||||||||| ||||||||| ||||||| ||||||||||||| ||||||||||| |||||||    
T  33628891 ttttggtccctgtaatttcagattcctctacttttggtccctcattttacgtgccatgtatg 33628830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 39711249 - 39711310
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 206  Q
    |||||||||| ||||||||  ||||||||||||||||||||| ||||||||||| |||||||    
T  39711249 ttttggtccctgtaatttcggattcctccacttttggtccctcattttacgtgccatgtatg 39711310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 17606307 - 17606358
Alignment:
Q  45 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  17606307 taaatacctctttt-cgtccctgtaatattagcgaattccgattttagtccct 17606358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 20995697 - 20995752
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| | || |||||||||||||||||||||||||||||||||    
T  20995697 agggtaaatacctctttt-catctctgtaatattagcgaattccggttttagtccct 20995752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 29696714 - 29696794
Alignment:
Q  119 gtccctgtaattccatattcttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgca 199  Q
    |||||| ||||| ||||||| |||   ||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||    
T  29696714 gtccctataatttcatattcctcccactttggtccctgtattttcagattcctccacttttggtccctcattttacgtgca 29696794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 24467628 - 24467741
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    ||||||||||| |||||| |||||||||||||||||||||||||  ||||||||||| |          ||||||||| |||||||||||| || |||||    
T  24467628 agggtaaatacatctttt-cgtccctgtaatattagcgaattccaattttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattct 24467726  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  24467727 tccacttttggtccc 24467741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 34749137 - 34749250
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    ||||||||||| |||||| | |||||||||||||||||||||| | |||||||||||||          ||||||||| ||||| |||||| ||||||||    
T  34749137 agggtaaatacatctttt-catccctgtaatattagcgaattctgattttagtccctataaaaaaaagatttagattttgtccccgtaatttcatattct 34749235  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  34749236 tccacttttggtccc 34749250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 39826424 - 39826370
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  39826424 gggtaaatacctctttt-cgtccatgtaatattagcgaatttcggttttagtccct 39826370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 39970836 - 39970777
Alignment:
Q  156 gtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttg 215  Q
    ||||||||| |||| |||||||||||||||| ||||||||||| ||||||| ||||||||    
T  39970836 gtaatttcagattcatccacttttggtccctcattttacgtgccatgtatgcagattttg 39970777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 52058212 - 52058145
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||  ||||||||||||| ||||||||||||||||| ||||||||||  ||||||| |||||    
T  52058212 ttttggtccttgtaatttcatattactccacttttggtccctcattttacgtgtcatgtatgcagatt 52058145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 39711074 - 39711185
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattctt 140  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||| |          ||||||||| |||| ||||||| |||||||||    
T  39711074 gggtaaatacctctttt-cgtct-tgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccttgtaatttcatattctt 39711171  T
Q  141 ccatttttggtccc 154  Q
    ||| ||||||||||    
T  39711172 ccacttttggtccc 39711185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 152
Target Start/End: Original strand, 30299231 - 30299342
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc-ctatnnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    |||||||||||||||||| ||||||||||||||||||||| | || |||||||||  ||          ||||||||| |||||||||||| ||||||||    
T  30299231 agggtaaatacctctttt-cgtccctgtaatattagcgaacttcgattttagtcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 30299329  T
Q  140 tccatttttggtc 152  Q
    |||| ||||||||    
T  30299330 tccacttttggtc 30299342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 13229882 - 13229985
Alignment:
Q  119 gtccctgtaattccatattcttc-catttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtt 217  Q
    |||||||||||| || |||| || || |||||||||  ||||||||| ||||||||||||||||||||| ||||| ||||  ||||||| ||||| || |    
T  13229882 gtccctgtaatttcagattcctctcacttttggtcct-gtaatttcagattcctccacttttggtccctcattttgcgtgtcatgtatgcagattctgct 13229980  T
Q  218 tacgt 222  Q
    |||||    
T  13229981 tacgt 13229985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 30299419 - 30299475
Alignment:
Q  156 gtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    ||||||||| ||||||||||||||||||||| |||||| |||| ||||||| |||||    
T  30299419 gtaatttcagattcctccacttttggtccctcattttatgtgccatgtatgcagatt 30299475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 52058387 - 52058336
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 93  Q
    |||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  52058387 agggtaaatacctctttt-cgtccctgtaatattagcgaattttggttttagt 52058336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 8292804 - 8292858
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||    
T  8292804 gggtaaataactctttt-cgtccctgtactattagcgaatcccggttttagtccct 8292858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 8293187 - 8293072
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn---tttagatttagtccctgtaattccatatt 137  Q
    |||||||||||||||||| ||||||| |||||||| |||||||  |||||||||||| |            ||||||||| |||||||||||| ||||||    
T  8293187 agggtaaatacctctttt-cgtccctataatattaacgaattctagttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatatt 8293089  T
Q  138 cttccatttttggtccc 154  Q
    |||||| ||||||||||    
T  8293088 cttccacttttggtccc 8293072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 191
Target Start/End: Complemental strand, 16294241 - 16294206
Alignment:
Q  156 gtaatttcatattcctccacttttggtcccttattt 191  Q
    ||||||||||||||||||||||||||||||||||||    
T  16294241 gtaatttcatattcctccacttttggtcccttattt 16294206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 94
Target Start/End: Original strand, 17500781 - 17500820
Alignment:
Q  55 tttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  17500781 tttttggtccctgtaatattagcgaattccggttttagtc 17500820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 17502094 - 17502051
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccctat 99  Q
    |||| |||| ||||||||||||||||||||||||||||||||||    
T  17502094 ttttggtccttgtaatattagcgaattccggttttagtccctat 17502051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 34749332 - 34749277
Alignment:
Q  151 tcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 206  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||| ||| |||||||    
T  34749332 tccctgtaatttcagattcctccacttttggtccctcattttacatgccatgtatg 34749277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 37236731 - 37236774
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccctat 99  Q
    |||| ||||||||||||| |||||||||||||||||||||||||    
T  37236731 ttttggtccctgtaatatgagcgaattccggttttagtccctat 37236774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 39971024 - 39970970
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||||||||| ||||| |||||||||| |||||| ||||||||||||||    
T  39971024 gggtaaatacctctttt-cgtccatgtaatattaacgaatttcggttttagtccct 39970970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 42510380 - 42510341
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  42510380 ttttggtccctgtaatattagcgaattccggttttagtcc 42510341  T

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Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 43539524 - 43539591
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    ||||| |||| ||||||||| ||||||||||||||||| ||| ||||||||||  ||||||| |||||    
T  43539524 ttttgctccctgtaatttcaaattcctccacttttggtacctcattttacgtgtcatgtatgcagatt 43539591  T

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Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 52058011 - 52058061
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 93  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||||||||||    
T  52058011 gggtaaatacctctttt-cgtccttgtaatattaacgaattccggttttagt 52058061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 4907327 - 4907227
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtcc 153  Q
    ||||| ||||||||||||||||||||||| |||||||||||  ||          ||||||||| |||||||||||| || ||||||||| |||||||||    
T  4907327 ttttcctccctgtaatattagcgaattccagttttagtccctgtaaaataaaagatttagattttgtccctgtaatttcagattcttccacttttggtcc 4907228  T
Q  154 c 154  Q
    |    
T  4907227 c 4907227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 20995819 - 20995912
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| || |||| ||| | |||| ||||| ||||||||| ||| ||||||||||||||||| | ||||||||| ||||||| |||||    
T  20995819 gtccctgtaatttcagattcctcccacttttcgtccctgtaatttcaaatttctccacttttggtccctca-tttacgtgccatgtatgcagatt 20995912  T

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Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 27039637 - 27039690
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||||||| ||||    
T  27039637 agggttaatacctctttt-cgtccctgtaatatgagcgaattccggttttggtcc 27039690  T

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Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 30252279 - 30252163
Alignment:
Q  41 agggtaaatacctctttt-tcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatatt 137  Q
    |||||||||||||||||  | |||||| |||||||||||||||| ||||||||||||  ||          ||||||||| ||||| |||||| ||||||    
T  30252279 agggtaaatacctctttccttgtccctataatattagcgaattctggttttagtccctgtaaaaataaagatttagattttgtccccgtaatttcatatt 30252180  T
Q  138 cttccatttttggtccc 154  Q
    |||||||||||| ||||    
T  30252179 cttccatttttgatccc 30252163  T

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Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 42510034 - 42510127
Alignment:
Q  62 tccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    |||||||||||||||||||||||||||||| ||||| |          ||||||||| |||||||||||| |||||||||||| |||| |||||    
T  42510034 tccctgtaatattagcgaattccggttttaatccctgtaaaaaaataatttagattttgtccctgtaatttcatattcttccacttttagtccc 42510127  T

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Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 48072340 - 48072287
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    |||||||||||||||||| ||||  ||||||||||| ||||||||||||||||||    
T  48072340 agggtaaatacctctttt-cgtcattgtaatattagtgaattccggttttagtcc 48072287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 24467783 - 24467871
Alignment:
Q  124 tgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    ||||||| ||||||| ||| | |||||||||| ||||||||| ||| |||||| |||||||| | ||||||||||| ||||||| |||||    
T  24467783 tgtaatttcatattcctcccacttttggtccctgtaatttcagattactccacatttggtcc-tcattttacgtgccatgtatgcagatt 24467871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 29696936 - 29696884
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    |||||||||||||||||| |||   |||||||||||||||||||||||||||||    
T  29696936 agggtaaatacctctttt-cgtttatgtaatattagcgaattccggttttagtc 29696884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 34749483 - 34749431
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||| |||||||||    
T  34749483 gggtaaatacctcttttt-gtctctgtaatattatcgaattccgattttagtcc 34749431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 43539712 - 43539675
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagt 93  Q
    |||||||||||||||||||||| |||||||||||||||    
T  43539712 ttttcgtccctgtaatattagcaaattccggttttagt 43539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 13230110 - 13230059
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    ||||||||||||||||| |||| ||| |||||||||||||| |||||||||||    
T  13230110 gggtaaatacctctttt-cgtctctgaaatattagcgaatttcggttttagtc 13230059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 18462663 - 18462612
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 93  Q
    |||| ||||||||||||| | |||||||||||||||| |||||||||||||||    
T  18462663 agggcaaatacctcttttcc-tccctgtaatattagcaaattccggttttagt 18462612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 39826049 - 39826104
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||| | ||||||||||||||| || |||||||||||    
T  39826049 agggtaaatacctctttt-cgtccatataatattagcgaatttcgattttagtccct 39826104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 7473993 - 7473926
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||  ||||||||| ||||||||||||||| ||| | |||| |||||| ||||||| |||||    
T  7473993 ttttggtccttgtaatttcagattcctccacttttgatccatcatttcacgtgccatgtatgcagatt 7473926  T

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Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 18462440 - 18462538
Alignment:
Q  124 tgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    ||||||| ||||||| ||| | ||||||||||  |||||||||||| |||||| |||||| ||| ||||| ||||| ||||||| ||||| |||| ||||    
T  18462440 tgtaatttcatattcctcccacttttggtccctataatttcatattactccacgtttggt-cctcattttgcgtgccatgtatgcagattctgttgacgt 18462538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 20996046 - 20995933
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    ||||| ||||||||||||| ||||||||||||||||||||||   |||||||||| | |          ||||||||| ||| |||||||| ||||||||    
T  20996046 agggttaatacctcttttt-gtccctgtaatattagcgaattttagttttagtccatgtaaaaaaaagatttagattttgtctctgtaatttcatattct 20995948  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  20995947 tccacttttggtccc 20995933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 24468002 - 24467892
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    |||||||||||||||||    || ||||||||||| |||||||||||||||||||  ||          ||||||||| |||||||||||| || |||||    
T  24468002 gggtaaatacctctttt----ccatgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 24467907  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  24467906 tccacttttggtccc 24467892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 190
Target Start/End: Complemental strand, 20995962 - 20995928
Alignment:
Q  156 gtaatttcatattcctccacttttggtcccttatt 190  Q
    |||||||||||||| ||||||||||||||||||||    
T  20995962 gtaatttcatattcttccacttttggtcccttatt 20995928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 17606376 - 17606421
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| || ||||||||| |||||||||||| ||||||||||    
T  17606376 tttagattttgttcctgtaatttcatattcttccacttttggtccc 17606421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 4907040 - 4907076
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  4907040 gtccctgtaatttcatattcttccacttttggtccct 4907076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 8293107 - 8293071
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  8293107 gtccctgtaatttcatattcttccacttttggtccct 8293071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 34749215 - 34749251
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  34749215 gtccccgtaatttcatattcttccacttttggtccct 34749251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 39711372 - 39711336
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  39711372 gtccccgtaatttcatattcttccacttttggtccct 39711336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 39826356 - 39826312
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtcc 153  Q
    ||||||||| |||||||||||| || ||||||||| |||||||||    
T  39826356 tttagattttgtccctgtaatttcagattcttccacttttggtcc 39826312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 43400752 - 43400807
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||| |||||||||||| |||| || |||||| |||||||||||||||| ||||||    
T  43400752 agggttaatacctctttt-cgtctctataatatgagcgaattccggttttggtccct 43400807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 9e-22; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 10108369 - 10108483
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  10108369 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 10108467  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  10108468 ttccacttttggtccc 10108483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 14820295 - 14820407
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattctt 140  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |          ||||||||| |||||||||||| |||||||||    
T  14820295 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaagatttagattttgtccctgtaatttcatattctt 14820393  T
Q  141 ccatttttggtccc 154  Q
    ||| ||||||||||    
T  14820394 ccacttttggtccc 14820407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 5554868 - 5554923
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5554868 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 5554923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 21147927 - 21147990
Alignment:
Q  33 ttattgagagggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21147927 ttattgaaagggttaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccct 21147990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 10108547 - 10108614
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  10108547 ttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagatt 10108614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 43851665 - 43851719
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43851665 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 43851719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 17623115 - 17623029
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgta 204  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  17623115 gtccctgtaatttcaaattcctcccacttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtgccatgta 17623029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 10108749 - 10108635
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    ||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  10108749 agggttaatacctctttt-cgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 10108651  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  10108650 ttccacttttggtccc 10108635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 14820673 - 14820559
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    ||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  14820673 agggttaatacctctttta-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 14820575  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  14820574 ttccacttttggtccc 14820559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 18044205 - 18044153
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18044205 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtcc 18044153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 22494561 - 22494622
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 206  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||||    
T  22494561 ttttggtcccagtaatttcagattcctccacttttggtccctcattttacgtgtcatgtatg 22494622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 10171522 - 10171467
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  10171522 agggtaaataccgctttt-cgtccctgtaatattagcgaattccggttttagtccct 10171467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 43851865 - 43851798
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||| ||||||||||||||||||||||||| ||||| ||||||||||  ||||||| |||||    
T  43851865 ttttggtccctgtaatttcatattcctccacttttgatccctcattttacgtgtcatgtatgcagatt 43851798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 2583470 - 2583564
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| |||||||||||||| |||||| ||||||| ||| ||||||| |||||    
T  2583470 gtccctgtaatttcagattcctcctacttttggtccctgtaatttcaaattcctccacttttagtccctcattttacatgccatgtatgcagatt 2583564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 7689902 - 7689849
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  7689902 agggtaaatacctctttt-cgtccctgtaatattagcgaattccgattttagtcc 7689849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 42113212 - 42113118
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| ||||||| ||| | ||||||||||  |||||||||||| ||||||||||||||||| |||||| |||  ||||||| |||||    
T  42113212 gtccctgtaatttcatattcctcccacttttggtccctataatttcatattactccacttttggtccctcattttatgtgtcatgtatgcagatt 42113118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 30789735 - 30789638
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttg 215  Q
    |||| ||||||| ||||||| ||| | |||||||||  ||||||||| ||||||||||||||| ||||| || |||||||| ||||||| ||||||||    
T  30789735 gtccttgtaatttcatattcctcccacttttggtccttgtaatttcagattcctccacttttgatccctcatcttacgtgccatgtatgcagattttg 30789638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 21148315 - 21148260
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||    
T  21148315 agggtaaatacctctttt-cgtctctgtaatattagtgaattccggttttagtccct 21148260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 26136835 - 26136939
Alignment:
Q  119 gtccctgtaattccatatt-cttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtt 217  Q
    |||||||||||| || ||| || ||| |||||||||  ||| ||||| ||||||||| ||||||||||| ||||||||||| ||||||| ||||| || |    
T  26136835 gtccctgtaatttcagatttctcccacttttggtccttgtactttcagattcctccatttttggtccctcattttacgtgccatgtatgcagattctgct 26136934  T
Q  218 tacgt 222  Q
    |||||    
T  26136935 tacgt 26136939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 30789886 - 30789831
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  30789886 agggtaaatacctctttt-cgtccctgtaatattagtaaattccggttttagtccct 30789831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 7689700 - 7689767
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||| ||||| ||||||||| ||||||||||||||| ||||| ||||||||||| ||||||| |||||    
T  7689700 ttttagtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgtatgcagatt 7689767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 197
Target Start/End: Complemental strand, 14767735 - 14767656
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtg 197  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| |||||||||||||||||| || ||||||||||    
T  14767735 gtccctgtaatttcagattcctcccacttttggtccctgtaatttcaaattcctccacttttggtctctcattttacgtg 14767656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 5555046 - 5555116
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttg 215  Q
    |||||||||| ||||||||  |||||| |||||||||||||| ||||||||||| || |||| ||||||||    
T  5555046 ttttggtccctgtaatttcgaattccttcacttttggtccctcattttacgtgccatttatgcagattttg 5555116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 5555234 - 5555134
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtcc 153  Q
    ||||||||||||||||||||||||||| ||||||||||| |  ||          ||||||||| |||||||||||| |||||||||||| |||||||||    
T  5555234 ttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtcc 5555135  T
Q  154 c 154  Q
    |    
T  5555134 c 5555134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 7689523 - 7689576
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  7689523 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcggctttagtcc 7689576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 20877124 - 20877067
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 99  Q
    ||||| ||||||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  20877124 agggttaatacctcttttg-gtccctgtaatatgagcgaattccggttttagtccctat 20877067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 30789521 - 30789562
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  30789521 ttttcgtccctgtaatattagcgaattccgattttagtccct 30789562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 42112998 - 42113039
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  42112998 ttttcgtccctgtaatattagcgaattccgattttagtccct 42113039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 42605930 - 42605983
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgc 198  Q
    |||||||| | ||||||||| ||||||||||||||||||||| |||||||||||    
T  42605930 ttttggtcgctgtaatttcagattcctccacttttggtccctcattttacgtgc 42605983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 42606132 - 42606080
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    |||||||||| |||||||| ||||||||||||||||||||||| ||||||||||    
T  42606132 agggtaaatatctcttttt-gtccctgtaatattagcgaattctggttttagtc 42606080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 43481694 - 43481642
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    |||||||||| ||||||| |||| ||||||||||||||||||||||||||||||    
T  43481694 agggtaaatatctctttt-cgtcactgtaatattagcgaattccggttttagtc 43481642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 17622889 - 17622944
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||||    
T  17622889 agggtaaatacctctttt-cgtccttgtaatattagcgaatttcagttttagtccct 17622944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 26136684 - 26136739
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||| ||||||||||||    
T  26136684 agggtgaatacctctttt-cgttcctgtaatattagcgaattccagttttagtccct 26136739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 35367409 - 35367464
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||||||||| |||||    
T  35367409 agggtaaatacctcttttg-gtccctgcaatattagcgaattccggttttaatccct 35367464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 197
Target Start/End: Complemental strand, 21148164 - 21148086
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtg 197  Q
    |||||||||||| || |||| ||| | ||||||||| | |||||||| ||||||||||||||||||||| ||||||||||    
T  21148164 gtccctgtaatttcagattcctcccacttttggtccta-taatttcaaattcctccacttttggtccctcattttacgtg 21148086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 26137063 - 26136950
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcccta-tnnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    |||||||||||| ||||| ||||||||||||||||| ||||| | ||||||||||||| |          |||||||| |||||||||||| || |||||    
T  26137063 agggtaaataccactttt-cgtccctgtaatattagtgaatttcagttttagtccctagtaaaaaaaaaattagattttgtccctgtaatttcagattct 26136965  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  26136964 tccacttttggtccc 26136950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 38726686 - 38726743
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 99  Q
    ||||| |||||| |||||| ||||||||||||| ||| |||||||||||||||||||||    
T  38726686 agggttaatacc-ctttttggtccctgtaatatgagcaaattccggttttagtccctat 38726743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 5555169 - 5555129
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtcccttatt 190  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  5555169 gtccctgtaatttcatattcttccacttttggtcccttatt 5555129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 10108670 - 10108630
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtcccttatt 190  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  10108670 gtccctgtaatttcatattcttccacttttggtcccttatt 10108630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 14820594 - 14820554
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtcccttatt 190  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  14820594 gtccctgtaatttcatattcttccacttttggtcccttatt 14820554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 42113360 - 42113309
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 93  Q
    ||||||||||| |||||| |||||||||||||||| |||||| ||||||||||    
T  42113360 agggtaaatacatctttt-cgtccctgtaatattaacgaatttcggttttagt 42113309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 22494454 - 22494497
Alignment:
Q  110 ttagatttagtccctgtaattccatattcttccatttttggtcc 153  Q
    |||||||| || ||||||||| ||||||||||||||||||||||    
T  22494454 ttagattttgttcctgtaatttcatattcttccatttttggtcc 22494497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 99
Target Start/End: Complemental strand, 21144865 - 21144827
Alignment:
Q  61 gtccctgtaatattagcgaattccggttttagtccctat 99  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  21144865 gtccctgtaatattaacgaattccgattttagtccctat 21144827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 21148005 - 21148050
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| |||||||||||| || ||||||||| ||||||||||    
T  21148005 tttagattttgtccctgtaatttcagattcttccacttttggtccc 21148050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 40486642 - 40486683
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||| ||||||||||||||| ||||||||| |||||||||||    
T  40486642 ttttggtccctgtaatattaacgaattccgattttagtccct 40486683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 40487779 - 40487738
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||| |||| ||||||||||||||||||| ||||||||||||    
T  40487779 ttttggtccttgtaatattagcgaattccagttttagtccct 40487738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 1949651 - 1949702
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 93  Q
    ||||| ||||||||||||  ||||||||||||| | |||||||||||||||||    
T  1949651 agggttaatacctcttttg-gtccctgtaatatgatcgaattccggttttagt 1949702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 10108448 - 10108484
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  10108448 gtccctgtaatttcatattcttccacttttggtccct 10108484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 14820372 - 14820408
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  14820372 gtccctgtaatttcatattcttccacttttggtccct 14820408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 17623261 - 17623214
Alignment:
Q  45 taaatacctctttttcgtccctgtaatattagcgaattccggttttagt 93  Q
    |||||||||||||| | |||||||||||||||| ||||| |||||||||    
T  17623261 taaatacctctttt-catccctgtaatattagccaattctggttttagt 17623214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 21148015 - 21148055
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtcccttatt 190  Q
    ||||| ||||||||| |||| ||||||||||||||||||||    
T  21148015 gtccctgtaatttcagattcttccacttttggtcccttatt 21148055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 30789817 - 30789773
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtcc 153  Q
    ||||||||| |||||||||||| || ||||||||| |||||||||    
T  30789817 tttagattttgtccctgtaatttcagattcttccacttttggtcc 30789773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 42605822 - 42605866
Alignment:
Q  110 ttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||  ||||||||||| |||||||||||| ||||||||||    
T  42605822 ttagattttatccctgtaatttcatattcttccacttttggtccc 42605866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 9e-22; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 9266974 - 9267088
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  9266974 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 9267072  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  9267073 ttccacttttggtccc 9267088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 30500042 - 30500154
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattctt 140  Q
    ||||| |||||||||||| | ||||||||||||||||||||| |||||||||||||| |         ||||||||| |||||||||||| |||||||||    
T  30500042 agggttaatacctctttt-catccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatttagattttgtccctgtaatttcatattctt 30500140  T
Q  141 ccatttttggtccc 154  Q
    ||| ||||||||||    
T  30500141 ccacttttggtccc 30500154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 14171965 - 14171910
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14171965 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 14171910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 14262415 - 14262360
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14262415 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 14262360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 30500419 - 30500306
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |          ||||||||| |||||||||||| |||||| |    
T  30500419 agggtaaatacctctttt-cgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaatttagattttgtccctgtaatttcatattgt 30500321  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  30500320 tccacttttggtccc 30500306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 14262244 - 14262170
Alignment:
Q  138 cttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||| ||||| |||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  14262244 cttccacttttgatccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagatt 14262170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 17465558 - 17465492
Alignment:
Q  156 gtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||| || ||||||    
T  17465558 gtaatttcatattcctccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgt 17465492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 27946246 - 27946189
Alignment:
Q  39 agagggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  27946246 agagggtaaatacctctttt-cgtcccagtaatattagcgaattccggttttagtccct 27946189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 9267176 - 9267099
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    |||||||||  ||||||||| ||||||||||||||||||||| ||||||||| ||||||||| ||||| || ||||||    
T  9267176 ttttggtccttgtaatttcagattcctccacttttggtccctcattttacgtacaatgtatgcagattctgcttacgt 9267099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 14162021 - 14162118
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttg 215  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||| ||||||| | ||||||    
T  14162021 gtccctgtaatttcagattcctcctaattttggtccctgtaatttcaaattcctccatttttggtccctcattttacgtgccatgtatgcaaattttg 14162118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 16721990 - 16722042
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16721990 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtc 16722042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 16722370 - 16722256
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    |||||||||||||||||| ||||||||||||||||||||||| | |||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  16722370 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcagttttagtccctgtacaaaaaaagatttagattttgtccctgtaatttcatattc 16722272  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  16722271 ttccacttttggtccc 16722256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 35995677 - 35995791
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| || ||||    
T  35995677 agggtaaatacctctttt-cgttcctgtaatattagcgaattccggttttagtccctgtagaattttttttttagattttgtccctgtaatttcagattc 35995775  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  35995776 ttccacttttggtccc 35995791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 47575499 - 47575406
Alignment:
Q  120 tccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    ||||||||||| || |||| ||| |||||| ||||| ||||||||| ||||||||||||||| ||||| ||||||||||| ||||||| |||||    
T  47575499 tccctgtaatttcaaattcctcccattttttgtccctgtaatttcaaattcctccacttttgatccctcattttacgtgccatgtatgcagatt 47575406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 49986705 - 49986782
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||| || ||||||    
T  49986705 ttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgt 49986782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 5800605 - 5800718
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    ||||||||||||||||| |||||||||||||||| |||||| |||||||||||||  ||          ||||||||  |||||||||||| ||||||||    
T  5800605 gggtaaatacctctttt-cgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattct 5800703  T
Q  140 tccatttttggtccc 154  Q
    |||||||||||||||    
T  5800704 tccatttttggtccc 5800718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 19112763 - 19112818
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  19112763 agggtaaatacctctttt-cgtccatgtaatattagcgaattccggttttagtccct 19112818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 45969914 - 45969969
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  45969914 agggtaaatacctctttt-cgtccctgtaatattagtgaattccggttttagtccct 45969969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 14162248 - 14162194
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14162248 gggttaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccct 14162194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 19720333 - 19720387
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  19720333 gggtaaatatctctttt-cgtccctgtaatattagcgaattccggttttagtccct 19720387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 43572541 - 43572620
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtg 197  Q
    |||||||||||| ||||||| ||| | |||||||||| ||||||||| ||| ||||||||||||||||| ||||||||||    
T  43572541 gtccctgtaatttcatattcctcccacttttggtccctgtaatttcaaattactccacttttggtccctcattttacgtg 43572620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 21633046 - 21633140
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| || |||| ||| | |||||||||  ||||||||| ||||||||||||||||||||| |||||| |||| ||||||| |||||    
T  21633046 gtccctgtaatttcagattcctcccacttttggtccttgtaatttcagattcctccacttttggtccctcattttatgtgccatgtatgcagatt 21633140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 4204907 - 4204842
Alignment:
Q  147 ttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||| | ||||||||||||| ||||||||||||||||| ||||||||||| ||||||| |||||    
T  4204907 ttggtctctgtaatttcatattactccacttttggtccctcattttacgtgccatgtatgcagatt 4204842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 5800755 - 5800852
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttg 215  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||| ||||||||||| ||||||| ||| ||||||| | ||||||    
T  5800755 gtccctgtaatttcagattcctcctagttttggtccctgtaatttcaaattcctccatttttggtccctcattttacatgccatgtatgcaaattttg 5800852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 19112966 - 19112889
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    |||||||||| ||||||||| ||| ||||||||||||||||| ||||||||| | ||||||| ||||| || ||||||    
T  19112966 ttttggtccctgtaatttcagatttctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgt 19112889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 30500268 - 30500175
Alignment:
Q  120 tccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    ||||||||||| || |||| ||| | |||||||||  ||||||||| |||||| |||||||||||||| ||||||||||| ||||||| |||||    
T  30500268 tccctgtaatttcagattcctcccacttttggtccatgtaatttcaaattccttcacttttggtccctcattttacgtgccatgtatgcagatt 30500175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 35995879 - 35995802
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    |||| ||||| |||||||||| |||||||||||||||||||| ||||||||||  ||||||| ||||| || ||||||    
T  35995879 tttttgtccctgtaatttcatgttcctccacttttggtccctcattttacgtgtcatgtatgcagattctgcttacgt 35995802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 45003673 - 45003750
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    ||||| |||| ||||||||||||||||||||||||| ||||| ||||||| ||| ||||||| ||||| || ||||||    
T  45003673 ttttgttccctgtaatttcatattcctccacttttgatccctcattttacatgccatgtatgcagattctgcttacgt 45003750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 49986526 - 49986578
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  49986526 agggtaaatacctctttt-cgtccctgtaatattagagaattccggttttagtc 49986578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 9267353 - 9267298
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  9267353 agggtaaatacctctttt-cgtccttgtaatattagcgaattccgattttagtccct 9267298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 11003731 - 11003786
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||    
T  11003731 agggtaaatacctcttttt-gtccttgtaatattaccgaattccggttttagtccct 11003786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 14161871 - 14161984
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat--nnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| |||||||| |||||           ||||||||  |||||||||||| ||||||||    
T  14161871 gggtaaatatctctttt-cgtccctgtaatattagcgaattccagttttagttcctataaaaaaaaagatttagattatgtccctgtaatttcatattct 14161969  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  14161970 tccacttttggtccc 14161984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 16722171 - 16722235
Alignment:
Q  148 tggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||||||||||  ||||||| |||||    
T  16722171 tggtccctgtaatttcagattcctccacttttggtccctcattttacgtgtcatgtatgcagatt 16722235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 35996054 - 35995999
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  35996054 agggtaaatacatctttt-cgtccctgtaatattagcgaattccgattttagtccct 35995999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 38283738 - 38283794
Alignment:
Q  156 gtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  38283738 gtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagatt 38283794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 45970065 - 45970153
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 206  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||| ||||||||||||||||| ||||||||||  |||||||    
T  45970065 gtccctgtaatttcagattcctcccacttttggtccctgtaatttcagatttctccacttttggtccctcattttacgtgtcatgtatg 45970153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 45970295 - 45970240
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||    
T  45970295 agggtaaatacctctttt-cgtccctgtaatattagtgaatttcggttttagtccct 45970240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 14171787 - 14171720
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||| ||||||||| ||||||||| ||||| ||||| ||||||||||| ||||||| |||||    
T  14171787 ttttggtccctgtaatttcagattcctccatttttgatccctcattttacgtgccatgtatgcagatt 14171720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 14262049 - 14262088
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14262049 ttttcgtccctgtaatattagcgaattccggttttagtcc 14262088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 15328610 - 15328689
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtg 197  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| |||||||||||||||||| || ||||||||||    
T  15328610 gtccctgtaatttcagattcctcccacttttggtccctgtaatttcaaattcctccacttttggtctctcattttacgtg 15328689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 19113143 - 19113089
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  19113143 gggtaaatacctctttt-cgtccctataatattaacgaattccggttttagtccct 19113089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 154
Target Start/End: Complemental strand, 45003859 - 45003761
Alignment:
Q  57 tttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn-tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    |||||||||||||||||||||||||| |||||||||| ||| |          |||||||||||||||| ||||| |||||||||||| ||||||||||    
T  45003859 tttcgtccctgtaatattagcgaatttcggttttagttcctgtaaaaaaaagatttagatttagtccctataatttcatattcttccacttttggtccc 45003761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 20853694 - 20853743
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggtttta 91  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  20853694 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcggtttta 20853743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 27946114 - 27946163
Alignment:
Q  47 aatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  27946114 aatacctctttt-cgtccctgtaatattagcgaatttcggttttagtccct 27946163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 21633275 - 21633161
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat--nnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    ||||||||||||| || | ||||||||||||||||||||||| | ||||||||||||||           ||||||||| |||||||||||| || ||||    
T  21633275 agggtaaatacctattct-cgtccctgtaatattagcgaatttcagttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattc 21633177  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  21633176 ttccacttttggtccc 21633161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 43572388 - 43572502
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    ||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||  ||          ||||||||| |||||||||||| || ||||    
T  43572388 agggtaaatacatctttt-cgttcctgtaatattagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttcagattc 43572486  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  43572487 ttccacttttggtccc 43572502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 52552891 - 52552826
Alignment:
Q  147 ttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||| ||||||||| |||||| |||||||||||||| ||||||||||  ||||||| |||||    
T  52552891 ttggtccctgtaatttcaaattccttcacttttggtccctcattttacgtgtcatgtatgcagatt 52552826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 5800982 - 5800870
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    |||| |||||||||||| ||||||||||||||||||||||||||| |||||||||  ||          ||||||||| |||| ||||||| ||||||||    
T  5800982 gggttaatacctctttt-cgtccctgtaatattagcgaattccgg-tttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattct 5800885  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  5800884 tccacttttggtccc 5800870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 20853886 - 20853830
Alignment:
Q  156 gtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    ||||||| | ||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  20853886 gtaattttagattcctccacttttggtccctcattttacgtgccatgtatgcagatt 20853830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 24490298 - 24490243
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||    
T  24490298 agggtaaatatct-tttttcctccctgtaatattagtgaattccggttttagtccct 24490243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 33372405 - 33372456
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 93  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||||||||    
T  33372405 agggtaaatatctctttt-cgtccctgtaatattagcgaattctggttttagt 33372456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 33372583 - 33372635
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtg 197  Q
    |||||||| | ||||||||||||||||||||||||| ||||| ||||||||||    
T  33372583 ttttggtctctgtaatttcatattcctccacttttgatccctcattttacgtg 33372635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 35740830 - 35740870
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccc 96  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  35740830 ttttggtccctgtaatattagcgaattccggttttagtccc 35740870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 49986907 - 49986856
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 93  Q
    |||||||||||||||||| |||||| |||||||||||||||| ||||||||||    
T  49986907 agggtaaatacctctttt-cgtcccagtaatattagcgaatttcggttttagt 49986856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 3426027 - 3425973
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc 96  Q
    ||||| ||||||||||||  | ||||||||||||||||||||||||||||||||||    
T  3426027 agggttaatacctcttttg-gcccctgtaatattagcgaattccggttttagtccc 3425973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 20854074 - 20853961
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc-ctatnnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    |||||||||| ||||||| ||||| ||||||||||||||||| ||||||||||||  ||          ||||||||| |||||||||||| || |||||    
T  20854074 agggtaaatatctctttt-cgtccatgtaatattagcgaatttcggttttagtcctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 20853976  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  20853975 tccacttttggtccc 20853961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 14171586 - 14171635
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggtttta 91  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  14171586 agggtaaataccactttt-cgtccctgtaatattagcgaattccgatttta 14171635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 21632900 - 21632940
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaatt 82  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  21632900 agggtaaatacctctttt-cgtccctgtaatattagcgaatt 21632940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 35741949 - 35741908
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||| |||||||||||||||||||||||| ||||||||||||    
T  35741949 ttttggtccctgtaatattagcgaattccagttttagtccct 35741908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 36991024 - 36990983
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  36991024 ttttggtccctgtaatattagcgaatttcggttttagtccct 36990983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 37016464 - 37016423
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  37016464 ttttggtccctgtaatattagcgaatttcggttttagtccct 37016423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 45003496 - 45003552
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 99  Q
    ||||||||| ||||||| |||||| ||||||||||| ||||||||||| |||||||||    
T  45003496 gggtaaatatctctttt-cgtccccgtaatattagcaaattccggtttcagtccctat 45003552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 3424773 - 3424828
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||| ||||||||||||  ||||||||||||||||||| |||||||||| ||||||    
T  3424773 agggttaatacctcttttg-gtccctgtaatattagcgatttccggttttggtccct 3424828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 16722291 - 16722251
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtcccttatt 190  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  16722291 gtccctgtaatttcatattcttccacttttggtcccttatt 16722251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 17649384 - 17649337
Alignment:
Q  45 taaatacctctttttcgtccctgtaatattagcgaattccggttttagt 93  Q
    |||||||||||||| || |||||||||| ||||||||||||||||||||    
T  17649384 taaatacctctttt-cgaccctgtaatactagcgaattccggttttagt 17649337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 30500119 - 30500159
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtcccttatt 190  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  30500119 gtccctgtaatttcatattcttccacttttggtcccttatt 30500159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 33372783 - 33372732
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 93  Q
    |||||||||||||||||| |||||| |||||||||||||||| || |||||||    
T  33372783 agggtaaatacctctttt-cgtccccgtaatattagcgaatttcgattttagt 33372732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 38283563 - 38283602
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  38283563 ttttcatccctgtaatattaacgaattccggttttagtcc 38283602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 154
Target Start/End: Complemental strand, 52553065 - 52552953
Alignment:
Q  43 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattctt 140  Q
    ||||||||| |||||| ||||| ||||||||||||||||||  |||||||||||  ||          ||||||||| ||| |||||||| |||||||||    
T  52553065 ggtaaatacatctttt-cgtccttgtaatattagcgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcatattctt 52552967  T
Q  141 ccatttttggtccc 154  Q
    ||| ||||||||||    
T  52552966 ccacttttggtccc 52552953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 190
Target Start/End: Complemental strand, 5800899 - 5800865
Alignment:
Q  156 gtaatttcatattcctccacttttggtcccttatt 190  Q
    |||||||||||||| ||||||||||||||||||||    
T  5800899 gtaatttcatattcttccacttttggtcccttatt 5800865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 17465746 - 17465697
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggtttta 91  Q
    |||||||||||||||||| ||||| ||||||||||||||||| | ||||||    
T  17465746 agggtaaatacctctttt-cgtccttgtaatattagcgaatttcagtttta 17465697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 11003882 - 11003943
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 179  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||||||||    
T  11003882 gtccctgtaatttcagattcctcccacttttggtccctgtaatttcagattcctccactttt 11003943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 14262104 - 14262149
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| |||||||||||| || ||||||||| ||||||||||    
T  14262104 tttagattttgtccctgtaatttcagattcttccacttttggtccc 14262149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 19112833 - 19112878
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| ||||||| |||| |||||||||||| ||||||||||    
T  19112833 tttagattttgtccctggaatttcatattcttccacttttggtccc 19112878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 20853764 - 20853809
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| |||||| ||||| |||||||||||| ||||||||||    
T  20853764 tttagattttgtccctataatttcatattcttccacttttggtccc 20853809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 9267053 - 9267089
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  9267053 gtccctgtaatttcatattcttccacttttggtccct 9267089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 14161949 - 14161985
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  14161949 gtccctgtaatttcatattcttccacttttggtccct 14161985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 14262114 - 14262154
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtcccttatt 190  Q
    ||||| ||||||||| |||| ||||||||||||||||||||    
T  14262114 gtccctgtaatttcagattcttccacttttggtcccttatt 14262154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 17465366 - 17465417
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 93  Q
    ||||||||||||||||||| |||| | |||||||||||||||| | |||||||    
T  17465366 agggtaaatacctcttttt-gtccttttaatattagcgaattctgattttagt 17465417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 19112851 - 19112883
Alignment:
Q  158 aatttcatattcctccacttttggtcccttatt 190  Q
    |||||||||||| ||||||||||||||||||||    
T  19112851 aatttcatattcttccacttttggtcccttatt 19112883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 43572769 - 43572718
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 93  Q
    |||||||||||||||||| | |||||||||||||  | |||||||||||||||    
T  43572769 agggtaaatacctctttt-catccctgtaatattgacaaattccggttttagt 43572718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 4e-21; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 20419536 - 20419649
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| ||||||||    
T  20419536 gggtaaatacctctttt-cgtccctataatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 20419634  T
Q  140 tccatttttggtccc 154  Q
    |||||||||||||||    
T  20419635 tccatttttggtccc 20419649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 120 - 222
Target Start/End: Original strand, 23704812 - 23704915
Alignment:
Q  120 tccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgttt 218  Q
    ||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||| || ||    
T  23704812 tccctgtaatttcagattcctcccacttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtgccatgtatgcagattctgctt 23704911  T
Q  219 acgt 222  Q
    ||||    
T  23704912 acgt 23704915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 23705039 - 23704926
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |          ||||||||| |||||||||||| ||||||||    
T  23705039 agggtaaatacctctttt-cgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattct 23704941  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  23704940 tccacttttggtccc 23704926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 20963723 - 20963629
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| ||||||| ||| | |||||||||  |||||||||||||| |||||||||||||||| ||||||||||| ||||||| |||||    
T  20963723 gtccctgtaatttcatattcctcccacttttggtccttgtaatttcatattcttccacttttggtccctcattttacgtgccatgtatgcagatt 20963629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 20963872 - 20963760
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |          |||||||||||||||||||||| || |||||    
T  20963872 agggtaaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccctgtaaaaataaaatttagatttagtccctgtaatttcagattct 20963774  T
Q  140 tccatttttggtcc 153  Q
    | || |||||||||    
T  20963773 ttcacttttggtcc 20963760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 20419737 - 20419660
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||||| ||||| || ||||||    
T  20419737 ttttggtccctgtaatttcatattcctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgt 20419660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 28218542 - 28218428
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| || ||||    
T  28218542 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattc 28218444  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  28218443 ttccacttttggtccc 28218428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 41600337 - 41600223
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| || ||||    
T  41600337 agggtaaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattc 41600239  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  41600238 ttccacttttggtccc 41600223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 28218177 - 28218232
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28218177 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 28218232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 44817043 - 44816959
Alignment:
Q  138 cttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    |||||| |||||||||  ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||| || ||||||    
T  44817043 cttccacttttggtccttgtaatttcagattcctccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgt 44816959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 31851467 - 31851373
Alignment:
Q  119 gtccctgtaattccatattcttc-catttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| || |||| || || ||||| |||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||||| |||||    
T  31851467 gtccctgtaatttcagattcctctcaattttgatccctgtaatttcatatttctccacttttggtccctcattttacgtgccatgtatgcagatt 31851373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 20458892 - 20458815
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    |||||||||  ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||| || ||||||    
T  20458892 ttttggtccttgtaatttcagattcctccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgt 20458815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 12006540 - 12006595
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  12006540 agggtaaatacctctttt-cgtccctgtaatattagcgaattccgattttagtccct 12006595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 20419915 - 20419861
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  20419915 gggtaaatacctcttttt-gtccctgtaatattaacgaattccggttttagtccct 20419861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 41600159 - 41600092
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||| ||||||| |||||    
T  41600159 ttttggtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgtatgcagatt 41600092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 23704662 - 23704710
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggtttta 91  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23704662 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggtttta 23704710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 38880099 - 38879989
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttc 141  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||  ||          ||||||||| |||||||||||| || |||||||    
T  38880099 gggtaaatacctctttt-cgtccctgtaatattagcaaattccggttttagtcttta-aaaaaaaaatttagattttgtccctgtaatttcagattcttc 38880002  T
Q  142 catttttggtccc 154  Q
    || ||||||||||    
T  38880001 cacttttggtccc 38879989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 20458691 - 20458746
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||    
T  20458691 agggtaaatacat-tttttcgtccctgtaatattaacgaattccggttttagtccct 20458746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 44816832 - 44816884
Alignment:
Q  43 ggtaaatacctctttt-tcgtccctgtaatattagcgaattccggttttagtc 94  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  44816832 ggtaaatacctcttttctcgtccctgtaatattagcgaatttcggttttagtc 44816884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 48672658 - 48672603
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  48672658 agggtaaatacctctttt-cgtctctgtaatattagcgaatttcggttttagtccct 48672603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 6465855 - 6465909
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||| || |||||||||| ||||||||||||||||||||||||||||||||    
T  6465855 gggtaaatatct-tttttcgtccatgtaatattagcgaattccggttttagtccct 6465909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 12006741 - 12006674
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||| | ||||||||| ||||||||||||||| ||||| ||||||||||| ||||||| |||||    
T  12006741 ttttggtcactgtaatttcagattcctccacttttgatccctcattttacgtgccatgtatgcagatt 12006674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 155
Target Start/End: Original strand, 16995200 - 16995313
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattctt 140  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||| |          ||||||||| |||||||||||| || ||||||    
T  16995200 gggtaaatacctctttt-cgtctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaatatttagattttgtccctgtaatttcagattctt 16995298  T
Q  141 ccatttttggtccca 155  Q
    ||| |||||||||||    
T  16995299 ccacttttggtccca 16995313  T

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Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 191
Target Start/End: Original strand, 24194931 - 24195014
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttc-catttttggtcccagtaatttcatattcctccacttttggtcccttattt 191  Q
    ||||||||| |||||||||||| || |||| || || ||||||||||  |||||||| ||||||||||||||||||||| ||||    
T  24194931 tttagattttgtccctgtaatttcagattcctctcacttttggtccctataatttcagattcctccacttttggtccctcattt 24195014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 23383499 - 23383613
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat---nnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    |||||||||| |||||| |||| |||||||||||| ||||||||||||||||||||||            ||||||||| |||||| ||||| |||||||    
T  23383499 gggtaaatacttctttt-cgtctctgtaatattagtgaattccggttttagtccctataaaaaaaaaagatttagattttgtccctataatttcatattc 23383597  T
Q  139 ttccatttttggtccc 154  Q
    |||||||||| |||||    
T  23383598 ttccattttttgtccc 23383613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 25772553 - 25772487
Alignment:
Q  156 gtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    ||||||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||| || ||||||    
T  25772553 gtaatttcagattcctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgt 25772487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 38879723 - 38879837
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct---atnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    ||||||||||||||||| |||||||||||||||||||||||||  ||||||| |||   |          ||||||||| |||||||||||| |||||||    
T  38879723 gggtaaatacctctttt-cgtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattc 38879821  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  38879822 ttccacttttggtccc 38879837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 12006919 - 12006805
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    |||||||||||||||||| ||| | |||||||||||||||||||| ||||||||||  ||          ||||||||| |||||||||||| || ||||    
T  12006919 agggtaaatacctctttt-cgttcatgtaatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattc 12006821  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||||||||    
T  12006820 ttccacttttggtccc 12006805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 23383701 - 23383624
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    |||||||||  ||||||||| |||||| |||||||||||||| ||||||||||  ||||||| ||||| || ||||||    
T  23383701 ttttggtccttgtaatttcaaattccttcacttttggtccctcattttacgtgtcatgtatgcagattctgcttacgt 23383624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 23383879 - 23383765
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct--atnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    |||||||||||||||||| ||||||||||||||||| |||||| | |||||||||||  |          ||||||||| |||||||||||| |||||||    
T  23383879 agggtaaatacctctttt-cgtccctgtaatattagtgaattctgattttagtccctgaaaaaaaaaagatttagattttgtccctgtaatttcatattc 23383781  T
Q  139 ttccatttttggtccc 154  Q
    |||||  |||||||||    
T  23383780 ttccacctttggtccc 23383765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 24195250 - 24195198
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    ||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  24195250 gggtaaatacctctttt-cgtccctgtaatattagcgaattctgattttagtcc 24195198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 41599958 - 41600010
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    ||||||||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  41599958 gggtaaatacctctttt-catccctgtaatattagcgaatttcggttttagtcc 41600010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 48672276 - 48672328
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    |||||||||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  48672276 agggtaaatacctctttt-cgtccctgtaatattagtgaatttcggttttagtc 48672328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 10409752 - 10409697
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| | ||| |||||||||||||||||||| |||||||||||    
T  10409752 agggtaaatacctctttt-catccatgtaatattagcgaattccgattttagtccct 10409697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 14647029 - 14646974
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||| |||||| |||||| ||||||||||||| |||||||||||||||||||||||    
T  14647029 agggttaatacc-ctttttagtccctgtaatatgagcgaattccggttttagtccct 14646974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 20459069 - 20459022
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttt 89  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  20459069 agggtaaatacctctttt-cgtccctgtaatattagggaattccggttt 20459022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 25772363 - 25772414
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 93  Q
    |||||||||||||||||| ||||||||||||||||||||||| || |||||||    
T  25772363 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcgattttagt 25772414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 38879952 - 38879848
Alignment:
Q  119 gtccctgtaattccatatt-cttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtt 217  Q
    |||||||||||| |||||| || ||| |||||||| |  |||||||| |||||||||  |||||||||| |||||| |||| ||||||| ||||| || |    
T  38879952 gtccctgtaatttcatattcctcccacttttggtctctataatttcagattcctccaaatttggtccctcattttatgtgccatgtatgcagattctgct 38879853  T
Q  218 tacgt 222  Q
    |||||    
T  38879852 tacgt 38879848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 7658342 - 7658292
Alignment:
Q  43 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    |||||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  7658342 ggtaaatacctctttt-cgtccctgtaatattaacgaatttcggttttagtc 7658292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 10409551 - 10409618
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||  ||||||||| ||||||||||||||| ||||| ||||||| ||| ||||||| |||||    
T  10409551 ttttggtccttgtaatttcagattcctccacttttgatccctcattttacatgccatgtatgcagatt 10409618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 48672480 - 48672413
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||  ||||||||| ||||||||||||||| ||||| ||||||| ||| ||||||| |||||    
T  48672480 ttttggtccttgtaatttcagattcctccacttttgatccctcattttacatgccatgtatgcagatt 48672413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 33162705 - 33162779
Alignment:
Q  138 cttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||| |||||||||  ||||||||| ||| || |||||||||||||| |||||| |||| ||||||| |||||    
T  33162705 cttccacttttggtccgtgtaatttcagattacttcacttttggtccctcattttatgtgccatgtatgcagatt 33162779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 33162915 - 33162862
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    |||||||||||||||||| |||| |||||||||||||||||| | ||||||||||    
T  33162915 agggtaaatacctctttt-cgtctctgtaatattagcgaatttctgttttagtcc 33162862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 48648457 - 48648395
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    ||||| ||||||||| ||||||||| |||||||||||  |||||||||| ||||||| |||||    
T  48648457 gtccctgtaatttcagattcctccaattttggtccctccttttacgtgccatgtatgcagatt 48648395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 6466004 - 6466077
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattt 191  Q
    |||||||||||| || |||| ||| | ||||| |||| ||||||||||||| ||||||||||||||||| ||||    
T  6466004 gtccctgtaatttcaaattcctcccacttttgatccctgtaatttcatattactccacttttggtccctcattt 6466077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 31852209 - 31852157
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    ||||| |||||||||||| |||||||||||||||| |||||| |||||||||||    
T  31852209 agggttaatacctctttt-cgtccctgtaatattaacgaatttcggttttagtc 31852157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 7657972 - 7658023
Alignment:
Q  45 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||| ||||| ||||||||||||||||| |||||||| |||||    
T  7657972 taaatacctctttt-cgtccatgtaatattagcgaatttcggttttaatccct 7658023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 25772710 - 25772655
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||| ||||||| ||||||| ||||||||| ||||||| ||||||||||||    
T  25772710 agggtaaatatctctttt-cgtccctataatattagtgaattccagttttagtccct 25772655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 28218391 - 28218323
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtccct 186  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||| |||||||||||||||||    
T  28218391 gtccctgtaatttcagattcctcccacttttggtccctgtaatttcagattactccacttttggtccct 28218323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 1250434 - 1250340
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| || |||| ||| |||||||||| | |||||| |||||||||||||||||  ||| | ||||||| ||  ||||||| |||||    
T  1250434 gtccctgtaatttcaaattcctcctatttttggtcactgtaattccatattcctccacttttaatccttcattttacatgacatgtatgcagatt 1250340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 1250571 - 1250533
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  1250571 ttttcgtccttgtaatattagcgaattccagttttagtc 1250533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 31851548 - 31851506
Alignment:
Q  110 ttagatttagtccctgtaattccatattcttccatttttggtc 152  Q
    |||||||| |||||||||||| |||||||||||| ||||||||    
T  31851548 ttagattttgtccctgtaatttcatattcttccacttttggtc 31851506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 1250516 - 1250471
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| |||||| ||||| |||||||||||| ||||||||||    
T  1250516 tttagattttgtccctttaatttcatattcttccacttttggtccc 1250471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 6466184 - 6466132
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    |||||||||| |||||||| ||  |||||||||||||||||| |||||||||||    
T  6466184 agggtaaatatctcttttt-gtatctgtaatattagcgaatttcggttttagtc 6466132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 20963507 - 20963548
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||||||||||||| ||||||  ||||||||||||    
T  20963507 ttttcgtccctgtaatattagtgaattctagttttagtccct 20963548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 20963563 - 20963608
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||    
T  20963563 tttagatttagtccctgtaattttagattcttccacttttggtccc 20963608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 23258289 - 23258248
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||| ||| |||||||||||||||||||||||||| ||||||    
T  23258289 ttttggtctctgtaatattagcgaattccggttttggtccct 23258248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 24195106 - 24195061
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  24195106 tttagattttgtccttgtaatttcatattcttccacttttggtccc 24195061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 28218247 - 28218292
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| |||||||||||| || ||||||||| ||||||||||    
T  28218247 tttagattttgtccctgtaatttcagattcttccacttttggtccc 28218292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 14630335 - 14630390
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||| |||||| |||||| || | |||||||| |||||||||||||||||||||||    
T  14630335 agggttaatacc-ctttttagttcttgtaatatgagcgaattccggttttagtccct 14630390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 23704961 - 23704925
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  23704961 gtccctgtaatttcatattcttccacttttggtccct 23704925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 97
Target Start/End: Original strand, 33131651 - 33131687
Alignment:
Q  61 gtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  33131651 gtccctgtaatatgagcgatttccggttttagtccct 33131687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 38879802 - 38879838
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38879802 gtccctgtaatttcatattcttccacttttggtccct 38879838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 48648263 - 48648314
Alignment:
Q  43 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    |||||||| ||||||| |||||||||||||| |||||||| || |||||||||    
T  48648263 ggtaaatatctctttt-cgtccctgtaatatcagcgaatttcgattttagtcc 48648314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 26385506 - 26385402
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtt 217  Q
    |||||||||||| ||||||| ||| | |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||  ||||| || |    
T  26385506 gtccctgtaatttcatattcctcccagttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtgccatgtatacagattctgct 26385407  T
Q  218 tacgt 222  Q
    |||||    
T  26385406 tacgt 26385402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 32017882 - 32017769
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |          ||||||||| |||||||||||| ||||||||    
T  32017882 agggtaaatatctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattct 32017784  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  32017783 tccacttttggtccc 32017769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 30618112 - 30618205
Alignment:
Q  119 gtccctgtaattccatattcttccatttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| || ||||| ||| ||||| || | ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  30618112 gtccctgtaatttcagattctcccacttttgatcactgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgtagatt 30618205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 9481182 - 9481295
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||          ||||||||  |||||||||||| ||||||||    
T  9481182 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattct 9481280  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  9481281 tccaattttggtccc 9481295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 24731934 - 24731989
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24731934 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 24731989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 18500314 - 18500427
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| |          ||||||||| |||||||||||| ||||||||    
T  18500314 agggtaaatacctctttt-cgtccctataatattagcgaatttcggttttagtccctgtaagaaaaagatttagattttgtccctgtaatttcatattct 18500412  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  18500413 tccacttttggtccc 18500427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 3230091 - 3230016
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttatttta 193  Q
    |||||||||||| ||||||| ||| | |||||||||  ||||||||||||||||||||||||||||||| ||||||    
T  3230091 gtccctgtaatttcatattcctcccacttttggtccttgtaatttcatattcctccacttttggtccctcatttta 3230016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 18500708 - 18500655
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  18500708 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtcc 18500655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 10321746 - 10321787
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10321746 ttttcgtccctgtaatattagcgaattccggttttagtccct 10321787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 24732115 - 24732192
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    ||||||||||  |||||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||| || ||||||    
T  24732115 ttttggtccctataatttcagattcctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgt 24732192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 33714688 - 33714611
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    |||||||| | ||||||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||| || ||||||    
T  33714688 ttttggtctctgtaatttcagattcctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgt 33714611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 26385649 - 26385598
Alignment:
Q  45 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  26385649 taaatacctctttt-cgtccctgtaatattagcgaattccgattttagtccct 26385598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 26385278 - 26385330
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    ||||||||||||||||| |||| ||||||||||||||||||| |||||||||||    
T  26385278 gggtaaatacctctttt-cgtctctgtaatattagcgaattctggttttagtcc 26385330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 32017731 - 32017670
Alignment:
Q  151 tcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||||  ||||||| |||||    
T  32017731 tccctgtaatttcaaattcctccacttttggtccctcattttacgtgtcatgtatgcagatt 32017670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 2299692 - 2299641
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 93  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||||||||||    
T  2299692 agggtaaatatctctttt-cgttcctgtaatattagcgaattccggttttagt 2299641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 17142866 - 17142798
Alignment:
Q  119 gtccctgtaattccatattcttc-catttttggtcccagtaatttcatattcctccacttttggtccct 186  Q
    |||||||||||| || |||| || || |||||||||| ||||||||| |||||||||||||||||||||    
T  17142866 gtccctgtaatttcagattcctctcacttttggtccctgtaatttcagattcctccacttttggtccct 17142798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 18500526 - 18500438
Alignment:
Q  135 attcttccatttttggtcccagtaatttc-atattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    |||| |||| |||||||||| |||||||  | ||||||||||||||||||||| ||||||||||  ||||||| ||||| || ||||||    
T  18500526 attcctccacttttggtccctgtaatttttagattcctccacttttggtccctcattttacgtgtcatgtatgcagattctgcttacgt 18500438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 30617966 - 30618075
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattctt 140  Q
    |||||||||||||||||| ||||||||||||||||| |||||| | |||||||||   |         ||||||||| |||||||||||| |||||| ||    
T  30617966 agggtaaatacctctttt-cgtccctgtaatattagtgaattctgattttagtcc---tttaaaaaaatttagattttgtccctgtaatttcatattgtt 30618061  T
Q  141 ccatttttggtccc 154  Q
    ||| ||||||||||    
T  30618062 ccacttttggtccc 30618075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 9854250 - 9854152
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    |||| ||||||||||||||||||||||| ||||||||||  ||          ||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  9854250 tttttgtccctgtaatattagcgaattctggttttagtctgtaaaaataataatttagattttgtccttgtaatttcatattcttccacttttggtccc 9854152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 24732316 - 24732274
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattcc 84  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  24732316 agggtaaatacctctttt-cgtccctgtaatattagcgaattcc 24732274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 56 - 91
Target Start/End: Original strand, 33714496 - 33714531
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggtttta 91  Q
    ||||||||||||||||||||||||||||||||||||    
T  33714496 ttttcgtccctgtaatattagcgaattccggtttta 33714531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 2299352 - 2299394
Alignment:
Q  55 tttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||  ||||||||||||||||||||||||||||||||    
T  2299352 tttttcgtctatgtaatattagcgaattccggttttagtccct 2299394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 21069527 - 21069568
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||| ||||||||||||| |||||||||||||||||||||||    
T  21069527 ttttagtccctgtaatatgagcgaattccggttttagtccct 21069568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 2299511 - 2299451
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtat 205  Q
    |||||||||  ||||||| | ||||| ||||||||||||||| ||||||||||| ||||||    
T  2299511 ttttggtccttgtaattttagattccgccacttttggtccctcattttacgtgccatgtat 2299451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 19284130 - 19284181
Alignment:
Q  43 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    |||||||||||||||| ||| | ||||||||||||||||||| ||||||||||    
T  19284130 ggtaaatacctctttt-cgttcatgtaatattagcgaattccagttttagtcc 19284181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 34113631 - 34113591
Alignment:
Q  55 tttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  34113631 tttttggtccctgtaatattagcgaatttcggttttagtcc 34113591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 33637709 - 33637772
Alignment:
Q  150 gtcccagtaatttcatattcctcc-acttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    ||||| ||||||||| |||||||| ||||||||||||| ||||||||||  ||||||| |||||    
T  33637709 gtccctgtaatttcagattcctcccacttttggtccctcattttacgtgttatgtatgcagatt 33637772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 19284197 - 19284242
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| |||||||||||| || ||||||||| ||||||||||    
T  19284197 tttagattttgtccctgtaatttcagattcttccacttttggtccc 19284242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 24732248 - 24732203
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  24732248 tttagattttgtccatgtaatttcatattcttccacttttggtccc 24732203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 26385346 - 26385391
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| ||||||||||||  ||||||||||| ||||||||||    
T  26385346 tttagattttgtccctgtaattttatattcttccacttttggtccc 26385391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 30458913 - 30458950
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagt 93  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  30458913 ttttcgtccctgtaatattagtgaatttcggttttagt 30458950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 33714555 - 33714600
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  33714555 tttagattttgtccttgtaatttcatattcttccacttttggtccc 33714600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 15942503 - 15942459
Alignment:
Q  55 tttttcgtccctgtaatattagcgaattccggttttagtccctat 99  Q
    ||||| ||||||| ||||| ||||||||||| |||||||||||||    
T  15942503 tttttggtccctgcaatatgagcgaattccgattttagtccctat 15942459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 18500392 - 18500428
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  18500392 gtccctgtaatttcatattcttccacttttggtccct 18500428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 32017804 - 32017768
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  32017804 gtccctgtaatttcatattcttccacttttggtccct 32017768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 6e-20; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 22263419 - 22263325
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  22263419 gtccctgtaatttcagattcctcctagttttggtccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagatt 22263325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 23806330 - 23806217
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||          ||||||||| |||||||||||| ||||||||    
T  23806330 gggtaaatacctcttttt-gtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 23806232  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  23806231 tccacttttggtccc 23806217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 26236277 - 26236349
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||| || ||||||    
T  26236277 gtccctgtaatttcatattcctccacttttggtccctcattttacgtgccatgtatgcagattctgcttacgt 26236349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 19251470 - 19251583
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||| |          ||||||||| |||||||||||| ||||||||    
T  19251470 agggttaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattct 19251568  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  19251569 tccacttttggtccc 19251583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 15106244 - 15106314
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttg 215  Q
    |||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||| ||||||| ||||||||    
T  15106244 ttttggtccctgtaatttcagattcctccacttttgatccctcattttacgtgccatgtatgcagattttg 15106314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 23854894 - 23854800
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| || |||| ||| | ||||| |||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  23854894 gtccctgtaatttcagattcctcccacttttgatccctgtaatttcaaattcctccacttttggtccctcattttacgtgccatgtatgcagatt 23854800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 17463470 - 17463356
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  17463470 agggtaaatacctctttt-cgcccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattgcatattc 17463372  T
Q  139 ttccatttttggtccc 154  Q
    ||||| ||||| ||||    
T  17463371 ttccacttttgatccc 17463356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 17850587 - 17850643
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 99  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  17850587 gggtaaatacctctttt-cgtccctgtaatattagcgaattccgattttagtccctat 17850643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 23806102 - 23806199
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttg 215  Q
    |||||||||||| || |||| ||| | ||||||||||  |||||||| ||||||||||||||||||||| ||||||||||| ||||||| | ||||||    
T  23806102 gtccctgtaatttcagattcctcccacttttggtccctataatttcagattcctccacttttggtccctcattttacgtgccatgtatgcaaattttg 23806199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 26236474 - 26236360
Alignment:
Q  40 gagggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct-atnnnnnnnnntttagatttagtccctgtaattccatattc 138  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |            ||||||||| |||||||||||| || ||||    
T  26236474 gagggtaaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtccttggaaaaaaaagatttagattttgtccctgtaatttcagattc 26236376  T
Q  139 ttccatttttggtccc 154  Q
    ||||||||||||||||    
T  26236375 ttccatttttggtccc 26236360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 222 - 294
Target Start/End: Complemental strand, 33456498 - 33456426
Alignment:
Q  222 tccaatcatccattgaaacgcgaatatctccttcatgataatcacaaacccaagcaagtgaatcttcaggcgg 294  Q
    |||||||||||||||||||   ||||||||||||| ||||||||||||||||  |||||||||||||| ||||    
T  33456498 tccaatcatccattgaaacaacaatatctccttcaggataatcacaaacccagacaagtgaatcttcacgcgg 33456426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 19251647 - 19251714
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    ||||| |||| ||||||||||||||||||||||||||||| | ||||||||||| ||||||| |||||    
T  19251647 ttttgatccctgtaatttcatattcctccacttttggtccatcattttacgtgccatgtatgcagatt 19251714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 56 - 154
Target Start/End: Original strand, 26560569 - 26560667
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    |||||||||||||||||||| |||||| || ||||||||||| |         |||||||||||||||||||||| || ||||||||| ||||||||||    
T  26560569 ttttcgtccctgtaatattaacgaatttcgattttagtccctgtaaaaaaagatttagatttagtccctgtaatttcagattcttccacttttggtccc 26560667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 26560782 - 26560688
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| || |||| ||| | ||||| |||| ||||||||| ||||||||||||||| ||||| ||||||||||| ||||||| |||||    
T  26560782 gtccctgtaatttcagattcctcccacttttgatccctgtaatttcaaattcctccacttttgatccctcattttacgtgccatgtatgcagatt 26560688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 15106443 - 15106332
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttc 141  Q
    ||||||||||||||||| |||||| |||||||||||||||| || ||||||||||| |         ||||||||| |||||||||||| || |||||||    
T  15106443 gggtaaatacctctttt-cgtccccgtaatattagcgaatttcgattttagtccctgtaaaaaaaaatttagattttgtccctgtaatttcagattcttc 15106345  T
Q  142 catttttggtccc 154  Q
    || ||||| ||||    
T  15106344 cacttttgatccc 15106332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 17850965 - 17850913
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  17850965 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtc 17850913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 22263572 - 22263520
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  22263572 agggtaaatacctctttt-cgttcctgtaatattagcgaattccggttttagtc 22263520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 26135994 - 26136071
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    |||||||||  ||||||| | ||||||||||||||||||||||||||||||| | ||||||| ||||| || ||||||    
T  26135994 ttttggtccttgtaattttagattcctccacttttggtcccttattttacgtaccatgtatgcagattctgcttacgt 26136071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 19251848 - 19251793
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  19251848 agggtaaatacctctttt-cgtccttgtaatattagtgaattccggttttagtccct 19251793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 23854688 - 23854797
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    |||| |||||||||||| ||||||||||||||||||||||| |||||||||||||  ||          ||||||||| |||||||||||| ||||||||    
T  23854688 gggttaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 23854786  T
Q  140 tccatttttgg 150  Q
    |||| ||||||    
T  23854787 tccacttttgg 23854797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 23855072 - 23855025
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggtttt 90  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23855072 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggtttt 23855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 30390655 - 30390583
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    ||||| ||||||||| |||||| || ||||||||||| ||||||||||| ||||||| |||||||| ||||||    
T  30390655 gtccctgtaatttcagattccttcatttttggtccctcattttacgtgctatgtatgcagattttgcttacgt 30390583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 12419087 - 12419044
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccctat 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  12419087 ttttggtccctgtaatattagcgaattccggttttagtccctat 12419044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 12431147 - 12431104
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccctat 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  12431147 ttttggtccctgtaatattagcgaattccggttttagtccctat 12431104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 39878100 - 39878156
Alignment:
Q  39 agagggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||||||| ||||  |||| ||||||||||||||||||||||||||||||||    
T  39878100 agagggtaaatacctttttt--gtccttgtaatattagcgaattccggttttagtccct 39878156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 39878252 - 39878331
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtg 197  Q
    |||||||||||| ||||||| ||| | ||||||||||  |||||||| ||| ||||||||||||||||| ||||||||||    
T  39878252 gtccctgtaatttcatattcctcccacttttggtccctctaatttcagattactccacttttggtccctcattttacgtg 39878331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 42670717 - 42670771
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  42670717 gggttaatacctctttt-cgtccctgtaatagtagcgaattccggttttagtccct 42670771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 42670920 - 42670861
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgta 204  Q
    |||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||| |||||    
T  42670920 ttttggtccctgtaatttcaaattcctccatttttggtccctcattttacgtgccatgta 42670861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 13254801 - 13254763
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13254801 ttttcgtccctgtaatattagcgaattccggttttagtc 13254763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 26135830 - 26135871
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  26135830 ttttcgtccctgtaatattagcgaattccgattttagtccct 26135871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 26560932 - 26560880
Alignment:
Q  43 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc 96  Q
    |||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  26560932 ggtaaatacctctttt-cgtccttgtaatattagcgaattccgattttagtccc 26560880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 13284609 - 13284537
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtt 217  Q
    |||||||||| ||||||||||||| || |||||||||||||| |||| |||||  ||||||| ||||| ||||    
T  13284609 ttttggtccctgtaatttcatatttcttcacttttggtccctcatttcacgtgtcatgtatgcagattctgtt 13284537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 20498746 - 20498801
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||    
T  20498746 agggtaaatacctctttt-cgtctatgtaatattagcgaattacggttttagtccct 20498801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 154
Target Start/End: Original strand, 22263205 - 22263304
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn-tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||| ||||||||||||||| |||||| |||||||||| ||||          ||||||||| |||||||||||| |||||||||||| ||||||||||    
T  22263205 ttttcatccctgtaatattagagaattctggttttagtctctatgaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccc 22263304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 26236126 - 26236181
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||| ||||||| ||||| |||||||||||||||||| |||||||||||||    
T  26236126 agggtaaatatctctttt-cgtccttgtaatattagcgaattctggttttagtccct 26236181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 20498922 - 20498989
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||| ||||||||| ||  ||||||||||| ||||| ||||||||||| ||||||| |||||    
T  20498922 ttttggtccctgtaatttcagatcactccacttttgatccctcattttacgtgctatgtatgcagatt 20498989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 30960036 - 30959997
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  30960036 ttttggtccctgtaatattagcgaattccggttttagtcc 30959997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 42671097 - 42671043
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||||||| |||||||||||| | ||||||||||||    
T  42671097 gggtaaatacctcttttt-gtccctgtagtattagcgaatttcagttttagtccct 42671043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 17463105 - 17463143
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  17463105 ttttcgtccctataatattagcgaattccggttttagtc 17463143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 17463241 - 17463335
Alignment:
Q  119 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||| | ||||||| | ||||||||||| ||||||| ||| ||||||| |||||    
T  17463241 gtccctgtaatttcagattcctcccacttttggtccctgtaattttagattcctctaattttggtccctcattttacatgccatgtatgcagatt 17463335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 23046706 - 23046763
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 99  Q
    |||||||||||||||||| ||||| |||||||| |||||||||||||||| ||| ||||    
T  23046706 agggtaaatacctctttt-cgtccttgtaatatgagcgaattccggttttggtctctat 23046763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 33290061 - 33290103
Alignment:
Q  55 tttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||| |||||||||||||||||||||||| ||||||||||||    
T  33290061 tttttggtccctgtaatattagcgaattccagttttagtccct 33290103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 13284778 - 13284737
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  13284778 ttttggtccctgtaatattagcgaatttcggttttagtccct 13284737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 23047961 - 23047913
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggtttt 90  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||||||    
T  23047961 agggtaaatacctatttt-cgtccctgtaatatgagcgaattccggtttt 23047913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 26136195 - 26136143
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    ||||||||||||||||| ||||| |||||||||| |||||| ||||||||||||    
T  26136195 gggtaaatacctctttt-cgtccttgtaatattaacgaatttcggttttagtcc 26136143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 30958697 - 30958738
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  30958697 ttttggtccctgtaatattagcgaatttcggttttagtccct 30958738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 33290226 - 33290295
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatttt 214  Q
    |||||||||| ||||||||| || |||||||||||||||||| |||| | | || ||||||| |||||||    
T  33290226 ttttggtccctgtaatttcagatacctccacttttggtccctcatttcatgagccatgtatgcagatttt 33290295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 44097737 - 44097786
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggtttt 90  Q
    |||||||||| || ||||||||||||||||||  ||||||||||||||||    
T  44097737 agggtaaatatctatttttcgtccctgtaataagagcgaattccggtttt 44097786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 22263269 - 22263309
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtcccttatt 190  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  22263269 gtccctgtaatttcatattcttccacttttggtcccttatt 22263309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 30390528 - 30390572
Alignment:
Q  110 ttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||    
T  30390528 ttagattttgtccctgtaatttcatattcttccacttttggtccc 30390572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 13284411 - 13284461
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttag 92  Q
    ||||| |||||| |||||| ||||||||||||| ||||||||||||||||||    
T  13284411 agggttaataccacttttt-gtccctgtaatatcagcgaattccggttttag 13284461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 15106067 - 15106121
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||| ||||||| |||||| |||||||||||||||| |||||||| |||||    
T  15106067 gggtaaatatctctttt-cgtccccgtaatattagcgaatttcggttttaatccct 15106121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 191
Target Start/End: Original strand, 33290133 - 33290168
Alignment:
Q  156 gtaatttcatattcctccacttttggtcccttattt 191  Q
    ||||||||||| ||||||||||||||||||||||||    
T  33290133 gtaatttcatactcctccacttttggtcccttattt 33290168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 33290412 - 33290314
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    |||| ||||||||||||||||||||||| ||||||| ||||| |          |||||||| | || ||||||| |||||||||||| ||||||||||    
T  33290412 ttttggtccctgtaatattagcgaattctggttttaatccctgtaaaaaaaaaattagattttgaccttgtaatttcatattcttccacttttggtccc 33290314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 34548574 - 34548628
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||| |||||| ||||||||||||||||| |||||  |||||||||||||    
T  34548574 gggtaaatacttctttt-cgtccctgtaatattagtgaattttggttttagtccct 34548628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 39878450 - 39878397
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| |||| ||||||||||||||||||| ||||| ||||||    
T  39878450 gggtaaatacctcttttt-gtcc-tgtaatattagcgaattccagttttcgtccct 39878397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 22263498 - 22263456
Alignment:
Q  112 agatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    |||||| |||||||||||| |||||||||||| ||||||||||    
T  22263498 agattttgtccctgtaatttcatattcttccacttttggtccc 22263456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 190
Target Start/End: Original strand, 42670803 - 42670837
Alignment:
Q  156 gtaatttcatattcctccacttttggtcccttatt 190  Q
    |||||||||||||| ||||||||||||||||||||    
T  42670803 gtaatttcatattcttccacttttggtcccttatt 42670837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 17850896 - 17850851
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||| |||||||||||| || ||||||||| ||||||||||    
T  17850896 tttagattttgtccctgtaatttcagattcttccacttttggtccc 17850851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 30390472 - 30390513
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||| |||||||||||||||||||| ||||| |||||    
T  30390472 ttttcgtccatgtaatattagcgaattccgattttaatccct 30390513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 13254496 - 13254551
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||  ||| |||||||||||||||||||  ||||||| |||||    
T  13254496 agggtaaatacctctttc-cgttcctgtaatattagcgaattttggttttactccct 13254551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 19251548 - 19251584
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  19251548 gtccctgtaatttcatattcttccacttttggtccct 19251584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 22263491 - 22263455
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  22263491 gtccctgtaatttcatattcttccacttttggtccct 22263455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 23806252 - 23806216
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  23806252 gtccctgtaatttcatattcttccacttttggtccct 23806216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 26560632 - 26560672
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtcccttatt 190  Q
    ||||| ||||||||| |||| ||||||||||||||||||||    
T  26560632 gtccctgtaatttcagattcttccacttttggtcccttatt 26560672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 30390537 - 30390573
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccct 186  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  30390537 gtccctgtaatttcatattcttccacttttggtccct 30390573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 42670788 - 42670832
Alignment:
Q  110 ttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    |||||||| |||| ||||||| |||||||||||| ||||||||||    
T  42670788 ttagattttgtccttgtaatttcatattcttccacttttggtccc 42670832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 44099000 - 44098953
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggtttt 90  Q
    ||||||||| ||||||| |||||||||||||| ||||||||| ||||||    
T  44099000 gggtaaatatctctttt-cgtccctgtaatatgagcgaattctggtttt 44098953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 12355 - 12248
Alignment:
Q  47 aatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat--nnnnnnnnntttagatttagtccctgtaattccatattcttccat 144  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||           ||||||||| |||||||||||| || |||||||||     
T  12355 aatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttccac 12257  T
Q  145 ttttggtcc 153  Q
    |||||||||    
T  12256 ttttggtcc 12248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 46; Significance: 5e-17; HSPs: 3)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 4740 - 4817
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||| || ||||||    
T  4740 ttttggtccctgtaatttcagattcctccacttttggtccctcattttacgtaccatgtatgcagattctgcttacgt 4817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 4941 - 4828
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 139  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||| |          ||||||||| |||| ||||||| ||||||||    
T  4941 agggtaaatacctctttt-cgtccctgtaatattagcaaattccggttttaatccctgtaaaaataagatttagattttgtccttgtaatttcatattct 4843  T
Q  140 tccatttttggtccc 154  Q
    |||| ||||||||||    
T  4842 tccacttttggtccc 4828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 4561 - 4616
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  4561 agggtaaatacctctttt-cgtccttgtaatattagcgaattccgattttagtccct 4616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 7579 - 7524
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  7579 agggtaaatacctatttt-cgtccctgtaatattagcgaattccggttttagtccct 7524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 154
Target Start/End: Original strand, 7227 - 7339
Alignment:
Q  43 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattctt 140  Q
    |||||||||||||||| ||||| |||||||||||||||||| ||| ||||| ||  ||          ||||||||| |||||||||||| |||||||||    
T  7227 ggtaaatacctctttt-cgtccttgtaatattagcgaattctggtgttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 7325  T
Q  141 ccatttttggtccc 154  Q
    ||| ||| ||||||    
T  7326 ccactttcggtccc 7339  T

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Target: scaffold0185 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 3868 - 3923
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  3868 agggtaaatatctctttt-cgtccctgtaatattagcgaattccggttttagtccct 3923  T

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Target: scaffold0185; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 4070 - 4003
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||| | ||||||||||||||||||||||||||||||| ||||||| ||| |||| || |||||    
T  4070 ttttggtcactgtaatttcatattcctccacttttggtccctcattttacttgccatgtgtgcagatt 4003  T

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Target: scaffold0809 (Bit Score: 44; Significance: 8e-16; HSPs: 3)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 1786 - 1728
Alignment:
Q  40 gagggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 99  Q
    |||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||    
T  1786 gagggtaaatccctctttt-cgtccctgtaatattaacgaattccggttttagtccctat 1728  T

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Target: scaffold0809; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 1587 - 1654
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatggagatt 212  Q
    |||||||||  ||||||||| ||| ||||||||||||||||| ||||||||||| ||||||| |||||    
T  1587 ttttggtccttgtaatttcagattactccacttttggtccctcattttacgtgccatgtatgcagatt 1654  T

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Target: scaffold0809; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 1410 - 1465
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||| || ||| |||||||| ||||||| || |||||||||||    
T  1410 agggtaaatacctctttt-cgacccggtaatatttgcgaatttcgattttagtccct 1465  T

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Target: scaffold0141 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 8324 - 8378
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc 96  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  8324 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtccc 8378  T

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Target: scaffold0141; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 8700 - 8646
Alignment:
Q  42 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||  |||||| || |||| |||||||||||||||||||||||||||||    
T  8700 gggtaaatactgcttttt-gttcctgcaatattagcgaattccggttttagtccct 8646  T

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Target: scaffold0477 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 4)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 4879 - 4932
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||||||||    
T  4879 agggtaaatacctcttttt-gttcctgtaatattagcgaatttcggttttagtcc 4932  T

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Target: scaffold0477; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 4935 - 5002
Alignment:
Q  156 gtaatttcatattcctcc-acttttggtcccttattttacgtgcaatgtatggagattttgtttacgt 222  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||| ||||||| ||||| || ||||||    
T  4935 gtaatttcatatttctcccacttttggtccctcattttacgtgccatgtatgtagattctgcttacgt 5002  T

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Target: scaffold0477; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 5112 - 5073
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtcc 95  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  5112 ttttcgtccatgtaatattagcgaattccggtttttgtcc 5073  T

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Target: scaffold0477; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 5058 - 5013
Alignment:
Q  109 tttagatttagtccctgtaattccatattcttccatttttggtccc 154  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||    
T  5058 tttagatttagtccctgtaattttagattcttccacttttggtccc 5013  T

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Target: scaffold0352 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 3)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 4666 - 4723
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 99  Q
    ||||||||||||||||||  ||||||| |||||||||||||||| ||||||||||||||    
T  4666 agggtaaatacctctttta-gtccctgcaatattagcgaattccagttttagtccctat 4723  T

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Target: scaffold0352; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 6058 - 6003
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||| |||||||||||    
T  6058 agggtaaatacctcttttg-gtccctgcaatattagcgaattccgattttagtccct 6003  T

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Target: scaffold0352; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 4745 - 4782
Alignment:
Q  150 gtcccagtaatttcatattcctccacttttggtccctt 187  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  4745 gtccctgtaatttcagattcctccacttttggtccctt 4782  T

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Target: scaffold0881 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 421 - 360
Alignment:
Q  145 ttttggtcccagtaatttcatattcctccacttttggtcccttattttacgtgcaatgtatg 206  Q
    |||||||||| ||||||||| ||||||| ||||||||||||| ||||||||| | |||||||    
T  421 ttttggtccctgtaatttcagattcctctacttttggtccctcattttacgtaccatgtatg 360  T

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Target: scaffold0881; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 218 - 269
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 93  Q
    |||||| ||| |||||||| |||||||||| |||||||||||| |||||||||    
T  218 agggtagatatctcttttt-gtccctgtaaaattagcgaattctggttttagt 269  T

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Target: scaffold0881; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 596 - 541
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 97  Q
    |||||||||||||||||||  || ||| ||||||| ||||||||||||||| |||||    
T  596 agggtaaatacctcttttta-tctctggaatattaacgaattccggttttactccct 541  T

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Target: scaffold0176 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 16007 - 15955
Alignment:
Q  41 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 94  Q
    |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  16007 agggtaaatatctctttt-cgtccatgtaatattagcgaattccggttttagtc 15955  T

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Target: scaffold0157 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 267 - 224
Alignment:
Q  56 ttttcgtccctgtaatattagcgaattccggttttagtccctat 99  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||    
T  267 ttttagtccctataatattagcgaattccagttttagtccctat 224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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