View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13061_low_67 (Length: 275)
Name: NF13061_low_67
Description: NF13061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13061_low_67 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 40095072 - 40094815
Alignment:
| Q |
18 |
ctaggttagtcaggagctttcctattttgaattttggacgaaacaagttccctagttgttttgtttctgatgagtgacgagttgattaggaaataaaatt |
117 |
Q |
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| T |
40095072 |
ctaggttagtcaggagctttcctattttgaattttggaagaaacaagttccctagttgttttgtttctgatgagtgacgagttgattaggaaataaaatt |
40094973 |
T |
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| Q |
118 |
tatccttcctagaaaaatatacaaattgaaattgacattcgttattttaatgtatattttgcagggggatgaactatttgcatgaacataaacctgaagc |
217 |
Q |
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| T |
40094972 |
tatccttcctagaaaaatatacaaattgaaattgacattcgttattttaatgtatattttgcagggggatgaactatttgcatgaacataaacctgaagc |
40094873 |
T |
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| Q |
218 |
cataatacaccgagatcttgagccttcgtatgttttttgctctcctgcctcatctatt |
275 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40094872 |
cataatacaccgagatcttgagccttcgtatgttttttgctctcctgcctcatctatt |
40094815 |
T |
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