View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13061_low_78 (Length: 247)
Name: NF13061_low_78
Description: NF13061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13061_low_78 |
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Alignment Details
Target: chr6 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 20728105 - 20727880
Alignment:
| Q |
1 |
taacttggtatctagcttgcatcatgggctcgctactaataatgatatttagtaacaatgtcatggtaacatgaacaaaaattataccagatatgatcta |
100 |
Q |
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| T |
20728105 |
taacttggtatctagcttgcatcatgggctcgctactaataatgatatttagtaa-aatgtcatggtaatatgaacaaaaattataccagatatgatcta |
20728007 |
T |
|
| Q |
101 |
ttacaattaagagaaaatgttacatgttagtacaccattcttactttgtttgttttacttgcatcaaaataaaatttgttttattctatgttaattttct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20728006 |
ttacaattaagagaaaatgttacatgttagtacaccattcttactttgtttgttttacttgcatcaaaataaaatttgttttattctatgttaattttct |
20727907 |
T |
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| Q |
201 |
ctcatttcctcgcacgcattgatgtgt |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
20727906 |
ctcatttcctcgcacgcattgatgtgt |
20727880 |
T |
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