View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13061_low_92 (Length: 213)

Name: NF13061_low_92
Description: NF13061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13061_low_92
NF13061_low_92
[»] chr4 (24 HSPs)
chr4 (14-194)||(2547506-2547686)
chr4 (110-178)||(2486297-2486365)
chr4 (46-165)||(2460600-2460719)
chr4 (111-178)||(2621163-2621230)
chr4 (109-179)||(2525746-2525816)
chr4 (110-178)||(2491118-2491186)
chr4 (103-158)||(12126890-12126945)
chr4 (111-165)||(2367678-2367732)
chr4 (45-175)||(2381313-2381443)
chr4 (110-173)||(2376234-2376297)
chr4 (111-158)||(12124834-12124881)
chr4 (102-176)||(2472084-2472158)
chr4 (103-165)||(6007668-6007730)
chr4 (128-177)||(2519224-2519273)
chr4 (46-87)||(2525949-2525990)
chr4 (46-87)||(2625303-2625344)
chr4 (46-87)||(5101958-5101999)
chr4 (31-87)||(2467683-2467739)
chr4 (36-87)||(12126967-12127018)
chr4 (121-175)||(5106326-5106380)
chr4 (46-87)||(12124911-12124952)
chr4 (46-86)||(2360929-2360969)
chr4 (110-178)||(2536575-2536643)
chr4 (46-86)||(5106230-5106270)
[»] chr5 (3 HSPs)
chr5 (113-165)||(32268773-32268825)
chr5 (107-151)||(41900254-41900298)
chr5 (107-145)||(32268817-32268855)
[»] chr1 (2 HSPs)
chr1 (113-165)||(15837967-15838019)
chr1 (110-154)||(52085556-52085600)
[»] chr8 (2 HSPs)
chr8 (110-172)||(39516853-39516915)
chr8 (113-165)||(32152209-32152261)
[»] chr6 (2 HSPs)
chr6 (122-166)||(6437151-6437195)
chr6 (120-166)||(7993319-7993365)
[»] chr3 (1 HSPs)
chr3 (110-166)||(51763153-51763209)
[»] chr2 (1 HSPs)
chr2 (110-157)||(44575184-44575231)
[»] chr7 (2 HSPs)
chr7 (110-156)||(15091356-15091402)
chr7 (46-87)||(2576265-2576306)


Alignment Details
Target: chr4 (Bit Score: 165; Significance: 2e-88; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 2547686 - 2547506
Alignment:
Q  14 agaagaacaatgacggtggcaacatgtccctgtttaccagatgagttatgggagcacatcttcaaattcctcaatgtctacgatgacgctttaaaatctc 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  2547686 agaagaacaatgacggtggcaacatgtccctatttaccagatgagttatgggagcacatcttcaaattcctcaatgtctacgaggacgctttaaaatcgc 2547587  T
Q  114 tctccatcgtctccaaacagtttctgtccatcaccaaccgtctccggttctcagtcacaatctccagtcagatcatccttt 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2547586 tctccatcgtctccaaacagtttctgtccatcaccaaccgtctccggttctcagtcacaatctccagtcatatcatccttt 2547506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 2486365 - 2486297
Alignment:
Q  110 tctctctccatcgtctccaaacagtttctgtccatcaccaaccgtctccggttctcagtcacaatctcc 178  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  2486365 tctctctccctcgtctcaaaacagtttctgtccatcaccaaccgtctccgattctcggtcacaatctcc 2486297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 2460719 - 2460600
Alignment:
Q  46 tttaccagatgagttatgggagcacatcttcaaattcctcaatgtctacgatgacgctttaaaatctctctccatcgtctccaaacagtttctgtccatc 145  Q
    ||||||||| ||  ||||||||  |||||||||||||||| | | | || |  || |||| |||||||||||||| |||||||||||||| || ||||||    
T  2460719 tttaccagaggaaatatgggagagcatcttcaaattcctcgacgacaaccaccacactttcaaatctctctccatggtctccaaacagttcctctccatc 2460620  T
Q  146 accaaccgtctccggttctc 165  Q
    ||||| |||||||| |||||    
T  2460619 accaatcgtctccgattctc 2460600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 2621163 - 2621230
Alignment:
Q  111 ctctctccatcgtctccaaacagtttctgtccatcaccaaccgtctccggttctcagtcacaatctcc 178  Q
    |||||||| |||| |||||||||||| ||||||||||||||||||| ||||||||  |||||||||||    
T  2621163 ctctctccctcgtatccaaacagtttttgtccatcaccaaccgtctacggttctccatcacaatctcc 2621230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 2525816 - 2525746
Alignment:
Q  109 atctctctccatcgtctccaaacagtttctgtccatcaccaaccgtctccggttctcagtcacaatctcca 179  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||| || ||||  |||||||||||||    
T  2525816 atctctctccctcgtctcaaaacagtttctgtccatcaccaacagtcttcgattcttggtcacaatctcca 2525746  T

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Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 2491186 - 2491118
Alignment:
Q  110 tctctctccatcgtctccaaacagtttctgtccatcaccaaccgtctccggttctcagtcacaatctcc 178  Q
    ||||||||  ||||||| |||||||||||||||||||| ||||||||||| || || ||||||||||||    
T  2491186 tctctctcactcgtctcaaaacagtttctgtccatcacaaaccgtctccgattttcggtcacaatctcc 2491118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 158
Target Start/End: Complemental strand, 12126945 - 12126890
Alignment:
Q  103 tttaaaatctctctccatcgtctccaaacagtttctgtccatcaccaaccgtctcc 158  Q
    ||||||| |||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  12126945 tttaaaacctctctccattgtctccaaacaatttctctccatcaccaaccgtctcc 12126890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 2367678 - 2367732
Alignment:
Q  111 ctctctccatcgtctccaaacagtttctgtccatcaccaaccgtctccggttctc 165  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  2367678 ctctttccatcgtctccaaacaatttctctccatcaccaaccgtctccgattctc 2367732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 175
Target Start/End: Original strand, 2381313 - 2381443
Alignment:
Q  45 gtttaccagatgagttatgggagcacatcttcaaattcctcaatgtctacgatgacgctttaaaatctctctccatcgtctccaaacagtttctgtccat 144  Q
    |||||||||||||  |||||||  ||||| |||||||||||||||   || |   | |||| || ||||| |||||||||||||||||||| || || ||    
T  2381313 gtttaccagatgacctatgggaatacatcatcaaattcctcaatggagaccactgcactttcaagtctctttccatcgtctccaaacagttactctcgat 2381412  T
Q  145 caccaaccgtctccggttctcagtcacaatc 175  Q
    ||||||| ||||||| ||||| |||| ||||    
T  2381413 caccaacagtctccgattctccgtcaaaatc 2381443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 2376234 - 2376297
Alignment:
Q  110 tctctctccatcgtctccaaacagtttctgtccatcaccaaccgtctccggttctcagtcacaa 173  Q
    |||||||||||||||||||||   ||||| ||||||||||||||| |||| ||||| |||||||    
T  2376234 tctctctccatcgtctccaaaacttttctctccatcaccaaccgtttccgattctcggtcacaa 2376297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 12124881 - 12124834
Alignment:
Q  111 ctctctccatcgtctccaaacagtttctgtccatcaccaaccgtctcc 158  Q
    |||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  12124881 ctctctccattgtctccaaacaatttctctccatcaccaaccgtctcc 12124834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 2472158 - 2472084
Alignment:
Q  102 ctttaaaatctctctccatcgtctccaaacagtttctgtccatcaccaaccgtctccggttctcagtcacaatct 176  Q
    |||| |||||||| ||||| ||||||||||||||| | ||||||||||| |||||| | |||||  |||||||||    
T  2472158 ctttcaaatctctttccatggtctccaaacagtttttctccatcaccaatcgtctctgattctccctcacaatct 2472084  T

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Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 6007730 - 6007668
Alignment:
Q  103 tttaaaatctctctccatcgtctccaaacagtttctgtccatcaccaaccgtctccggttctc 165  Q
    |||| ||||||||||| ||||||| |||||||| || |||||||||||| ||||||| |||||    
T  6007730 tttagaatctctctccctcgtctcgaaacagttcctctccatcaccaacagtctccgattctc 6007668  T

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Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 2519273 - 2519224
Alignment:
Q  128 aaacagtttctgtccatcaccaaccgtctccggttctcagtcacaatctc 177  Q
    ||||||||||||||||||||||||||| | || | |||||||||||||||    
T  2519273 aaacagtttctgtccatcaccaaccgttttcgatcctcagtcacaatctc 2519224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 2525990 - 2525949
Alignment:
Q  46 tttaccagatgagttatgggagcacatcttcaaattcctcaa 87  Q
    ||||||||| ||||||||||| ||||||||||||||||||||    
T  2525990 tttaccagaggagttatgggaacacatcttcaaattcctcaa 2525949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 2625303 - 2625344
Alignment:
Q  46 tttaccagatgagttatgggagcacatcttcaaattcctcaa 87  Q
    ||||||||| ||||||||||| ||||||||||||||||||||    
T  2625303 tttaccagaggagttatgggaacacatcttcaaattcctcaa 2625344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 5101958 - 5101999
Alignment:
Q  46 tttaccagatgagttatgggagcacatcttcaaattcctcaa 87  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  5101958 tttaccggatgagttatgggagcgcatcttcaaattcctcaa 5101999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 2467739 - 2467683
Alignment:
Q  31 ggcaacatgtccctgtttaccagatgagttatgggagcacatcttcaaattcctcaa 87  Q
    |||||||||| | | ||||||| | ||||||||||||| ||||||||||||||||||    
T  2467739 ggcaacatgttcatatttaccaaaggagttatgggagcgcatcttcaaattcctcaa 2467683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 12127018 - 12126967
Alignment:
Q  36 catgtccctgtttaccagatgagttatgggagcacatcttcaaattcctcaa 87  Q
    ||||||| | |||||| |||||||||||||||  ||||||||||||||||||    
T  12127018 catgtccatatttacctgatgagttatgggagatcatcttcaaattcctcaa 12126967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 5106326 - 5106380
Alignment:
Q  121 cgtctccaaacagtttctgtccatcaccaaccgtctccggttctcagtcacaatc 175  Q
    |||||| ||||||||| ||||||||||||||||||  || ||||| |||||||||    
T  5106326 cgtctcaaaacagtttttgtccatcaccaaccgtcctcgattctcggtcacaatc 5106380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 12124952 - 12124911
Alignment:
Q  46 tttaccagatgagttatgggagcacatcttcaaattcctcaa 87  Q
    ||||||||||||| ||||||||  ||||||||||||||||||    
T  12124952 tttaccagatgagatatgggagatcatcttcaaattcctcaa 12124911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 2360929 - 2360969
Alignment:
Q  46 tttaccagatgagttatgggagcacatcttcaaattcctca 86  Q
    ||||||||||||| ||||||| |||||| ||||||||||||    
T  2360929 tttaccagatgagctatgggaacacatcatcaaattcctca 2360969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 2536643 - 2536575
Alignment:
Q  110 tctctctccatcgtctccaaacagtttctgtccatcaccaaccgtctccggttctcagtcacaatctcc 178  Q
    ||||||||| || | || ||||||||||||||||||||||||| ||| || ||||  |||| |||||||    
T  2536643 tctctctccctcatttcaaaacagtttctgtccatcaccaaccttcttcgattcttggtcaaaatctcc 2536575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 5106230 - 5106270
Alignment:
Q  46 tttaccagatgagttatgggagcacatcttcaaattcctca 86  Q
    |||||| |||||||||||||||  |||||||||||||||||    
T  5106230 tttaccggatgagttatgggagggcatcttcaaattcctca 5106270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 32268825 - 32268773
Alignment:
Q  113 ctctccatcgtctccaaacagtttctgtccatcaccaaccgtctccggttctc 165  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || |||||    
T  32268825 ctctccatcgtctccaaacagttactctccatcaccaaccgtcttcgattctc 32268773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 41900254 - 41900298
Alignment:
Q  107 aaatctctctccatcgtctccaaacagtttctgtccatcaccaac 151  Q
    |||||||||||  ||||||||||||||||||| ||||||||||||    
T  41900254 aaatctctctcactcgtctccaaacagtttctctccatcaccaac 41900298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 145
Target Start/End: Complemental strand, 32268855 - 32268817
Alignment:
Q  107 aaatctctctccatcgtctccaaacagtttctgtccatc 145  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  32268855 aaatctctctccatcgtctccaaacagttactctccatc 32268817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 15837967 - 15838019
Alignment:
Q  113 ctctccatcgtctccaaacagtttctgtccatcaccaaccgtctccggttctc 165  Q
    ||||| || ||||||||||||||||| |||||||||||||||||||| |||||    
T  15837967 ctctcgatggtctccaaacagtttctctccatcaccaaccgtctccgattctc 15838019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 52085600 - 52085556
Alignment:
Q  110 tctctctccatcgtctccaaacagtttctgtccatcaccaaccgt 154  Q
    ||||| ||||||||||||||| |||| || |||||||||||||||    
T  52085600 tctctttccatcgtctccaaaaagttcctttccatcaccaaccgt 52085556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 39516915 - 39516853
Alignment:
Q  110 tctctctccatcgtctccaaacagtttctgtccatcaccaaccgtctccggttctcagtcaca 172  Q
    ||||||||||||||||||| ||| |||||  ||||||||||||||||| | ||||| ||||||    
T  39516915 tctctctccatcgtctccagacaatttctcgccatcaccaaccgtctcagattctccgtcaca 39516853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 32152261 - 32152209
Alignment:
Q  113 ctctccatcgtctccaaacagtttctgtccatcaccaaccgtctccggttctc 165  Q
    |||||| |||||||||||||||| || |||||||||||| ||||||| |||||    
T  32152261 ctctccctcgtctccaaacagttcctctccatcaccaacagtctccgattctc 32152209  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 6437195 - 6437151
Alignment:
Q  122 gtctccaaacagtttctgtccatcaccaaccgtctccggttctca 166  Q
    |||||||||||||| || ||||||||||||||||||| |||||||    
T  6437195 gtctccaaacagttcctctccatcaccaaccgtctcctgttctca 6437151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 7993319 - 7993365
Alignment:
Q  120 tcgtctccaaacagtttctgtccatcaccaaccgtctccggttctca 166  Q
    |||||||||||||||| || |||||||||| ||||||||| ||||||    
T  7993319 tcgtctccaaacagttcctctccatcaccagccgtctccgattctca 7993365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 51763153 - 51763209
Alignment:
Q  110 tctctctccatcgtctccaaacagtttctgtccatcaccaaccgtctccggttctca 166  Q
    |||||||||||||| ||||||||||| || ||||||||| ||||| |||| ||||||    
T  51763153 tctctctccatcgtttccaaacagttcctctccatcacccaccgtttccgattctca 51763209  T

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Target: chr2 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 44575184 - 44575231
Alignment:
Q  110 tctctctccatcgtctccaaacagtttctgtccatcaccaaccgtctc 157  Q
    ||||||||||||||||| ||||||||||| || |||||||| ||||||    
T  44575184 tctctctccatcgtctcaaaacagtttctctcaatcaccaatcgtctc 44575231  T

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Target: chr7 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 15091356 - 15091402
Alignment:
Q  110 tctctctccatcgtctccaaacagtttctgtccatcaccaaccgtct 156  Q
    ||||||||| |||||||||||||||| || |||||||||||| ||||    
T  15091356 tctctctccctcgtctccaaacagttcctctccatcaccaacagtct 15091402  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 2576265 - 2576306
Alignment:
Q  46 tttaccagatgagttatgggagcacatcttcaaattcctcaa 87  Q
    ||||| |||||||||||||| ||||||||||| |||||||||    
T  2576265 tttactagatgagttatgggggcacatcttcatattcctcaa 2576306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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