View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13062_low_14 (Length: 237)
Name: NF13062_low_14
Description: NF13062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13062_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 43952652 - 43952872
Alignment:
| Q |
1 |
ttggaatcaccgagattcattacaacaccacctcaagatctttgtggctcagcacgattcttcgtgaaaccaggtaactcaggatcattgatggaagatg |
100 |
Q |
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| T |
43952652 |
ttggaatcaccgagattcattacaacaccacctcaagatctttgtggctcagcacgattcttcgtgaaaccaggtaactcaggatcattgatggaagatg |
43952751 |
T |
|
| Q |
101 |
cactgtctctaacaaacagtgatgaagctgattcgagtaattcgaataattcaaattcatcatcaacagcatcaccttcaaaacaggttattgtagtaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43952752 |
cactgtctctaacaaacagtgatgaagctgattcgagtaattcgaataattcaaattcatcatcaacagcatcaccttcaaaacaggttattgtagtaaa |
43952851 |
T |
|
| Q |
201 |
ccatgatgatcacaaccatca |
221 |
Q |
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||||||||||||||| ||||| |
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| T |
43952852 |
ccatgatgatcacaatcatca |
43952872 |
T |
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