View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13065_high_2 (Length: 238)
Name: NF13065_high_2
Description: NF13065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13065_high_2 |
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Alignment Details
Target: chr1 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 43571288 - 43571400
Alignment:
| Q |
19 |
atatgccaattaaatacctacctccataatcccccttccaacacatccatctttgaaaacagaaaatcaagataatatataatccctgaacatgacaaac |
118 |
Q |
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| T |
43571288 |
atatgccaattaaatacctacctccataatcccccttcccacacatccatctttgaaaacagaaaatcaagataatatataatccctgaacatgacaaac |
43571387 |
T |
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| Q |
119 |
attatgtatggca |
131 |
Q |
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| T |
43571388 |
attatgtatggca |
43571400 |
T |
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