View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13067_high_1 (Length: 993)
Name: NF13067_high_1
Description: NF13067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13067_high_1 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 905; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 905; E-Value: 0
Query Start/End: Original strand, 11 - 976
Target Start/End: Complemental strand, 1439792 - 1438828
Alignment:
| Q |
11 |
cacagacaacacggaaatggaaggatgaataaataaacaaccttataactccttgaacacgagggctccgcaagaatcttgcaaaaagagtggtcacttc |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
1439792 |
cacagacaacacggaaatggaaggatgaataaataaacaaccttataactccttgaacacgagggctccgcaagaatcttgcgaaaagagtggtcacttc |
1439693 |
T |
|
| Q |
111 |
ttcaatgtctttagcgcggagtgaaaatgcctcaacattggttaagcatcttactgttctgtcactagtcaatccttgtccttgaagctttactttttta |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1439692 |
ttcaatgtctttagcgcggagtgaaaatgcctcaacattggttaagcatcttactgttctgtcactagtcaatccttgtccttgaagctttactttttta |
1439593 |
T |
|
| Q |
211 |
ccttctgcaagagaaaccacattggttaaaagtgttgtttctcacnnnnnnnnnatcaaggttgcgttgctgattattgctagttctttatgctatcatt |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1439592 |
ccttctgcaagagaaaccacattggttaaaagtgttgtttctcactttttttt-atcaaggttgcgttgctgattattgctagttctttatgctatcatt |
1439494 |
T |
|
| Q |
311 |
atatcaagtatagttgtacctttgctttcaacagactgttcaagataccatcttagaagttcttcaccacaagcatccccttctgataatggaaccggaa |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1439493 |
atatcaagtatagttgtacctttgctttcaacagactgttcaagataccatcttagaagttcttcaccacaagcatccccttctgataatggaaccggaa |
1439394 |
T |
|
| Q |
411 |
ttccatcttctccgatgctctccaactttccacgcacaataaacaccaccttttgtacgagaccaccctgactcagaattctacttcctttaatgtatgt |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1439393 |
ttccatcttctccgatgctctccaactttccacgcacaataaacaccatcttttgtacgagaccaccctgactcagaattctacttcctttaatgtatgt |
1439294 |
T |
|
| Q |
511 |
cgtctgtattagtctctcacgaatggcatctaagataggttcatcctcgtccatcatggaaaatattcgaacctgtagaaatgttagatcatcatagaga |
610 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1439293 |
cgtctgtattagtctctcacgaatggcatctaagataggttcatcctcgtccatcatggaaaatattcgaacctgtagaaatgttagatcatcatagaga |
1439194 |
T |
|
| Q |
611 |
attaaatcttcattataaataacgttcggacttgtttaatataattgtttttcaatgcgtaattgttttagtttcattatgaatatgcacaaagctttgt |
710 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1439193 |
attaaatcttcattataaataacgttcggacttgtttaatataattgtttttcaatgcgtaattgttttagtttcattatgaatatgcacaaagctttgt |
1439094 |
T |
|
| Q |
711 |
cttgaaaattgttttctcattcaacttctattggattccagcaaattacatgcaaacattataggtgagattttaaagttcacataacatctgaactaga |
810 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1439093 |
cttgaaaattgttttctcattcaacttctattggattccagcaaattacatgcaaacattataggtgagattttaaagttcacataacatctgaactaga |
1438994 |
T |
|
| Q |
811 |
taaataaaatctacttaaagagtatatcatttactatttttaaatgcttgaatgcatacnnnnnnnacaaatttgaagagatggcgtctaatgtctttct |
910 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
1438993 |
taaataaaatctacttaaagagtatatcatttactatttttaaatgcttgaatgcatactttttttacaaatttgaagagatggcgtctaatgtctttct |
1438894 |
T |
|
| Q |
911 |
ggagatcttctggcaaattttctagagccatttcctcaggaacgccccttgttgcagcccaagtat |
976 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1438893 |
ggagatcttctggcaaattttctagagccatttcctcaggaacgccccttgttgcagcccaagtat |
1438828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 306; Significance: 1e-172; HSPs: 23)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 304 - 769
Target Start/End: Complemental strand, 28090824 - 28090359
Alignment:
| Q |
304 |
tatcattatatcaagtatagttgtacctttgctttcaacagactgttcaagataccatcttagaagttcttcaccacaagcatccccttctgataatgga |
403 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
28090824 |
tatcattatatcaagtatagttgtacctttgctttcagaagactgttcaagataccatcttagaagttcttcaccacaagcatccccttctgataacgga |
28090725 |
T |
|
| Q |
404 |
accggaattccatcttctccgatgctctccaactttccacgcacaataaacaccaccttttgtacgagaccaccctgactcagaattctacttcctttaa |
503 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| || ||||| |||||||||||||| |||||| |||||||||||| |
|
|
| T |
28090724 |
accggaattccatcctctccgacgctctccaattttccacgcacaataaacaccattttctgtacaagaccaccctgactgagaattttacttcctttaa |
28090625 |
T |
|
| Q |
504 |
tgtatgtcgtctgtattagtctctcacgaatggcatctaagataggttcatcctcgtccatcatggaaaatattcgaacctgtagaaatgttagatcatc |
603 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| || ||| ||||||||||||| ||||||||||||||| |
|
|
| T |
28090624 |
tgtatgtcgtctgtattagtctctcacgaatggcgtctaagataggttcatcctcagccatatgggcaaaaattcgaacctgtacaaatgttagatcatc |
28090525 |
T |
|
| Q |
604 |
atagagaattaaatcttcattataaataacgttcggacttgtttaatataattgtttttcaatgcgtaattgttttagtttcattatgaatatgcacaaa |
703 |
Q |
| |
|
|||| ||||||||| ||||||||||| | ||| ||| ||||||||||||||| ||| |||| || |||||||||||||||||||||||||||| ||| |
|
|
| T |
28090524 |
gtagaaaattaaatcaccattataaatagcattcagacatgtttaatataattggattttaatgtgtcattgttttagtttcattatgaatatgcataaa |
28090425 |
T |
|
| Q |
704 |
gctttgtcttgaaaattgttttctcattcaacttctattggattccagcaaattacatgcaaacat |
769 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||| |||| |
|
|
| T |
28090424 |
cctttgtcttgaaaattgttttctcattcaacttctattggattccaacaagttacaggcagacat |
28090359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 304 - 754
Target Start/End: Complemental strand, 28073898 - 28073446
Alignment:
| Q |
304 |
tatcattatatcaagtatagttgtacctttgctttcaacagactgttcaagataccatcttagaagttcttcaccacaagcatccccttctgataatgga |
403 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
28073898 |
tatcattatattaagtatagttatacctttgctttcagaagactgttcaagataccatcttagaagttcttcaccacaagcatccccttctgataacata |
28073799 |
T |
|
| Q |
404 |
accggaattccatcttctccgatgctctccaactttccacgcacaataaacaccaccttttgtacgagaccaccctgactcagaattctacttcctttaa |
503 |
Q |
| |
|
|||| | ||||||||||||||| |||||| || |||||||||| ||||||||||| ||| ||||| ||| |||||||||| ||||||||||||||||||| |
|
|
| T |
28073798 |
accgaacttccatcttctccgacgctctctaattttccacgcataataaacaccatcttctgtacaagatcaccctgactgagaattctacttcctttaa |
28073699 |
T |
|
| Q |
504 |
tgtatgtcgtctgtattagtctctcacgaatggcatctaagataggttcatcctcgtccatcatggaaaatattcgaacctgtagaaatgttagatcatc |
603 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| ||||||| || | ||||||| || || ||| |||||||||||||||||| || || |
|
|
| T |
28073698 |
tgtatgtcgtctgtattagtctctcacgaatggcgtctaagaaaggttcacccccatccatcagagacaaaattggaacctgtagaaatgttaattcctc |
28073599 |
T |
|
| Q |
604 |
atagagaattaaatcttcattataaataacgttcggacttgtttaatataattgtttttcaatgcgtaattgttttagtttcattatgaatatgc--aca |
701 |
Q |
| |
|
||||| ||||||||| |||||||||||| |||||||||||||||||||| || ||| ||||||| |||||||||||| |||||||||| | | | |
|
|
| T |
28073598 |
atagaaaattaaatcatcattataaatagtgttcggacttgtttaatatagtttgctttttatgcgtatttgttttagtttacttatgaatatacataaa |
28073499 |
T |
|
| Q |
702 |
aagctttgtcttgaaaattgttttctcattcaacttctattggattccagcaa |
754 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28073498 |
aagatttgtcttgaaaattgttttctcattcaacttctattggattccagcaa |
28073446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 304 - 605
Target Start/End: Complemental strand, 28034568 - 28034267
Alignment:
| Q |
304 |
tatcattatatcaagtatagttgtacctttgctttcaacagactgttcaagataccatcttagaagttcttcaccacaagcatccccttctgataatgga |
403 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||| | |||||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||| || |
|
|
| T |
28034568 |
tatcgttatatcaagtatagttgtacctttacttttagcagactgttcaagataccatgttagaagctcttcaccagaagcatccccttccgataacaga |
28034469 |
T |
|
| Q |
404 |
accggaattccatcttctccgatgctctccaactttccacgcacaataaacaccaccttttgtacgagaccaccctgactcagaattctacttcctttaa |
503 |
Q |
| |
|
||||||||| |||||| ||| |||||||||| |||||||| |||||||| |||| ||| |||| ||||||||||||||| | || | ||||||||| || |
|
|
| T |
28034468 |
accggaatttcatcttttccaatgctctccatttttccacgaacaataaaaaccatcttctgtatgagaccaccctgactaaaaactatacttccttcaa |
28034369 |
T |
|
| Q |
504 |
tgtatgtcgtctgtattagtctctcacgaatggcatctaagataggttcatcctcgtccatcatggaaaatattcgaacctgtagaaatgttagatcatc |
603 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||| | |||||| | ||||| |||||||||| |||||||||| |
|
|
| T |
28034368 |
tgtatgtcgtctgtactagtcgttcacgaatggcatctaagataggctcatcctcatccattagggaaaaaaatcgaatctgtagaaatcttagatcatc |
28034269 |
T |
|
| Q |
604 |
at |
605 |
Q |
| |
|
|| |
|
|
| T |
28034268 |
at |
28034267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 150; E-Value: 9e-79
Query Start/End: Original strand, 304 - 605
Target Start/End: Complemental strand, 28001235 - 28000934
Alignment:
| Q |
304 |
tatcattatatcaagtatagttgtacctttgctttcaacagactgttcaagataccatcttagaagttcttcaccacaagcatccccttctgataatgga |
403 |
Q |
| |
|
|||||||||||||| ||||| | |||||||||||| | ||| ||||||||||||||| |||||| ||||||||||||||||||||||| | ||| | | |
|
|
| T |
28001235 |
tatcattatatcaaatatagctatacctttgcttttagaagatcgttcaagataccatcgtagaagctcttcaccacaagcatccccttcagttaacgta |
28001136 |
T |
|
| Q |
404 |
accggaattccatcttctccgatgctctccaactttccacgcacaataaacaccaccttttgtacgagaccaccctgactcagaattctacttcctttaa |
503 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||| ||||| ||||||||||| ||| ||||||||| | |
|
|
| T |
28001135 |
accggaattccatcttctccgatgctctccaattttccacgcacgataaacaccaccttctgtatgagacaaccctgactcaaaatcctacttcctctgt |
28001036 |
T |
|
| Q |
504 |
tgtatgtcgtctgtattagtctctcacgaatggcatctaagataggttcatcctcgtccatcatggaaaatattcgaacctgtagaaatgttagatcatc |
603 |
Q |
| |
|
|||| |||| |||||||||| |||| | ||||||||||||||||| |||| ||| ||||| | |||||| ||| |||||||||||||| |||||||||| |
|
|
| T |
28001035 |
tgtacatcgtatgtattagtcgctcaaggatggcatctaagataggctcattctcatccattagggaaaaaattggaacctgtagaaatcttagatcatc |
28000936 |
T |
|
| Q |
604 |
at |
605 |
Q |
| |
|
|| |
|
|
| T |
28000935 |
at |
28000934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 319 - 581
Target Start/End: Complemental strand, 28016768 - 28016506
Alignment:
| Q |
319 |
tatagttgtacctttgctttcaacagactgttcaagataccatcttagaagttcttcaccacaagcatccccttctgataatggaaccggaattccatct |
418 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||| ||||||| || |||||| ||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
28016768 |
tatagttgtacctttgctttcagaagaccgttcaagataccatattagaagctcctcaccaaaagcatccccttcggataacaaaaccggaattccatct |
28016669 |
T |
|
| Q |
419 |
tctccgatgctctccaactttccacgcacaataaacaccaccttttgtacgagaccaccctgactcagaattctacttcctttaatgtatgtcgtctgta |
518 |
Q |
| |
|
| ||||||||||||||| |||||||| |||||||| ||| ||||| |||| ||||||||||||||| |||| ||||||||| |||||||||||| |||| |
|
|
| T |
28016668 |
tttccgatgctctccaattttccacgaacaataaaacccatcttttttacgtgaccaccctgactcaaaattttacttccttcaatgtatgtcgtttgta |
28016569 |
T |
|
| Q |
519 |
ttagtctctcacgaatggcatctaagataggttcatcctcgtccatcatggaaaatattcgaa |
581 |
Q |
| |
|
||||| ||||||||| |||||||||| ||| |||||||| |||| || |||||| ||||||| |
|
|
| T |
28016568 |
ctagtcgctcacgaatagcatctaagacaggctcatcctcatccagcagggaaaaaattcgaa |
28016506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 33 - 232
Target Start/End: Complemental strand, 28091081 - 28090882
Alignment:
| Q |
33 |
ggatgaataaataaacaaccttataactccttgaacacgagggctccgcaagaatcttgcaaaaagagtggtcacttcttcaatgtctttagcgcggagt |
132 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||| || ||||| || |||||||||||||||||||| || ||| |
|
|
| T |
28091081 |
ggatcaataaataaatgaccttataactccttgaacacgagggctccgcaaaaatcttgcgaagagagttgtgacttcttcaatgtctttagcacgaagt |
28090982 |
T |
|
| Q |
133 |
gaaaatgcctcaacattggttaagcatcttactgttctgtcactagtcaatccttgtccttgaagctttacttttttaccttctgcaagagaaaccacat |
232 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| |||||||| || || || |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
28090981 |
gaaaatgcctccacattggttaagcatcttactgttctgtcgctagtcaaaccctggccgtgaagctttatttttttaccttctgcaagagaaaccacat |
28090882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 304 - 605
Target Start/End: Complemental strand, 27916212 - 27915911
Alignment:
| Q |
304 |
tatcattatatcaagtatagttgtacctttgctttcaacagactgttcaagataccatcttagaagttcttcaccacaagcatccccttctgataatgga |
403 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||| |||||| |||||| ||| | ||||||| |||||||||||| |||||||||| |||| | | |
|
|
| T |
27916212 |
tatcattatatcaagtatacttgtaccttttctttcagaagactgctcaagaaaccgtattagaagctcttcaccacaaacatccccttcagatagagaa |
27916113 |
T |
|
| Q |
404 |
accggaattccatcttctccgatgctctccaactttccacgcacaataaacaccaccttttgtacgagaccaccctgactcagaattctacttcctttaa |
503 |
Q |
| |
|
|| ||||||||||| ||| |||||||||||| ||||||||||||| ||||| || || ||||| ||| |||||||||||| |||| || |||| | | |
|
|
| T |
27916112 |
acttgaattccatctgctctgatgctctccaattttccacgcacaacaaacatcattttatgtacaagatcaccctgactcaaaattttatctcctctca |
27916013 |
T |
|
| Q |
504 |
tgtatgtcgtctgtattagtctctcacgaatggcatctaagataggttcatcctcgtccatcatggaaaatattcgaacctgtagaaatgttagatcatc |
603 |
Q |
| |
|
|||| ||| ||||||||| |||||||||| ||||||||||||| ||||||| |||| || |||||| |||||||||| ||||||| |||||||||| |
|
|
| T |
27916012 |
tgtacatcgcacgtattagtcgctcacgaatgacatctaagataggcgcatcctcatccaacagggaaaaaattcgaacctatagaaatcttagatcatc |
27915913 |
T |
|
| Q |
604 |
at |
605 |
Q |
| |
|
|| |
|
|
| T |
27915912 |
at |
27915911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 50 - 228
Target Start/End: Complemental strand, 28047244 - 28047066
Alignment:
| Q |
50 |
accttataactccttgaacacgagggctccgcaagaatcttgcaaaaagagtggtcacttcttcaatgtctttagcgcggagtgaaaatgcctcaacatt |
149 |
Q |
| |
|
||||||| ||| |||||| ||||||||||||||||||||||||||| |||| || ||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
28047244 |
accttatgacttgttgaacgcgagggctccgcaagaatcttgcaaaatgagttgtgacttcttcaatgtctttagcgtcgagtgaaaatgcctcaacatt |
28047145 |
T |
|
| Q |
150 |
ggttaagcatcttactgttctgtcactagtcaatccttgtccttgaagctttacttttttaccttctgcaagagaaacc |
228 |
Q |
| |
|
|||||||||| |||| |||||||||||||| || || |||||||||| |||||| ||||||| |||| ||||||||||| |
|
|
| T |
28047144 |
ggttaagcattttaccgttctgtcactagttaagccctgtccttgaatctttacatttttactttctacaagagaaacc |
28047066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 767 - 972
Target Start/End: Complemental strand, 28090334 - 28090137
Alignment:
| Q |
767 |
cattataggtgagattttaaagttcacataacatctgaactagataaataaaatctacttaaagagtatatcatttactatttttaaatgcttgaatgca |
866 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||||||| | |||||||||||| |||||||||||||||||| ||| ||||||||||| | |
|
|
| T |
28090334 |
cattttaggtgagattttaaagtccacataacatctgaaccatataaataaaatcgacttaaagagtatatcatgaactctttttaaatgc--------a |
28090243 |
T |
|
| Q |
867 |
tacnnnnnnnacaaatttgaagagatggcgtctaatgtctttctggagatcttctggcaaattttctagagccatttcctcaggaacgccccttgttgca |
966 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||| |
|
|
| T |
28090242 |
tactttattaacaaatttgaagagatggcgtcttatgtctgtctggagatcttctggcaaattttccagaaccattttctcaggaacaccccttgttgca |
28090143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 50 - 228
Target Start/End: Complemental strand, 28035038 - 28034860
Alignment:
| Q |
50 |
accttataactccttgaacacgagggctccgcaagaatcttgcaaaaagagtggtcacttcttcaatgtctttagcgcggagtgaaaatgcctcaacatt |
149 |
Q |
| |
|
||||||| ||| |||||| ||||||||||||||||||||| ||| ||||| || ||||| ||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
28035038 |
accttatgacttgttgaacgtgagggctccgcaagaatcttgaaaacagagttgtgacttcctcaatgtctttagcgtcgagtgaaaatgcctccacatt |
28034939 |
T |
|
| Q |
150 |
ggttaagcatcttactgttctgtcactagtcaatccttgtccttgaagctttacttttttaccttctgcaagagaaacc |
228 |
Q |
| |
|
|||||||||| ||||||||||||||||||| || || |||||| ||| ||||||||||||||| ||| ||||||||||| |
|
|
| T |
28034938 |
ggttaagcattttactgttctgtcactagttaagccatgtcctcgaatctttacttttttaccgtctacaagagaaacc |
28034860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 50 - 228
Target Start/End: Complemental strand, 27916680 - 27916502
Alignment:
| Q |
50 |
accttataactccttgaacacgagggctccgcaagaatcttgcaaaaagagtggtcacttcttcaatgtctttagcgcggagtgaaaatgcctcaacatt |
149 |
Q |
| |
|
||||||| ||| ||||||| ||||||||||||||| | ||| ||||||||| || |||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
27916680 |
accttatgacttgttgaacatgagggctccgcaagagttttgaaaaaagagttgtgacttcttcaatgtctttagcttcgagtgaaaatgcctccacatt |
27916581 |
T |
|
| Q |
150 |
ggttaagcatcttactgttctgtcactagtcaatccttgtccttgaagctttacttttttaccttctgcaagagaaacc |
228 |
Q |
| |
|
||||||||| ||||||||||||||||| | || | |||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
27916580 |
ggttaagcaatttactgttctgtcactaattaagtcctgtccttgaatctttacttttttaccttctacaagagaaacc |
27916502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 767 - 966
Target Start/End: Complemental strand, 28073403 - 28073204
Alignment:
| Q |
767 |
cattataggtgagattttaaagttcacataacatctgaactagataaataaaatctacttaaagagtatatcatttactatttttaaatgcttgaatgca |
866 |
Q |
| |
|
||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||| ||||||| ||||||| | || ||||||||||||||||||| |
|
|
| T |
28073403 |
cattataggtgagattttaaagttcacataaaaattgaaccagataaataaaatctacctaaagaggatatcatgaaatacttttaaatgcttgaatgca |
28073304 |
T |
|
| Q |
867 |
tacnnnnnnnacaaatttgaagagatggcgtctaatgtctttctggagatcttctggcaaattttctagagccatttcctcaggaacgccccttgttgca |
966 |
Q |
| |
|
||| ||||||||| ||||||||||||| |||||| |||||||||||||||||||||| | ||| |||| ||||||||| ||| |||||||| |
|
|
| T |
28073303 |
tactttattaacaaatttgtagagatggcgtcttatgtctgtctggagatcttctggcaaattcttgagaaccatactctcaggaacacccattgttgca |
28073204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 37 - 227
Target Start/End: Complemental strand, 28001698 - 28001508
Alignment:
| Q |
37 |
gaataaataaacaaccttataactccttgaacacgagggctccgcaagaatcttgcaaaaagagtggtcacttcttcaatgtctttagcgcggagtgaaa |
136 |
Q |
| |
|
|||||||| || ||||||| ||||||||| |||||||||||||||||| |||||||||||| | | |||||||||||||||| |||||||||||| |
|
|
| T |
28001698 |
gaataaattaatgaccttatgactccttgagtgtgagggctccgcaagaatcctgcaaaaagagttgcgagttcttcaatgtctttaacgcggagtgaaa |
28001599 |
T |
|
| Q |
137 |
atgcctcaacattggttaagcatcttactgttctgtcactagtcaatccttgtccttgaagctttacttttttaccttctgcaagagaaac |
227 |
Q |
| |
|
||||||| ||||||||||||||| |||||| |||| |||||| || || |||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
28001598 |
atgcctccacattggttaagcattttactgatctggtactagttaagccccatccttgaagctttacttttttaccttctacgagagaaac |
28001508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 50 - 228
Target Start/End: Complemental strand, 28074419 - 28074241
Alignment:
| Q |
50 |
accttataactccttgaacacgagggctccgcaagaatcttgcaaaaagagtggtcacttcttcaatgtctttagcgcggagtgaaaatgcctcaacatt |
149 |
Q |
| |
|
||||||| ||| |||||| ||||||||| |||||||||||| |||| |||| || ||||||||||||||||||||| ||||||||||||||| | ||| |
|
|
| T |
28074419 |
accttatgacttgttgaacgcgagggctctgcaagaatcttgaaaaacgagttgtgacttcttcaatgtctttagcgtcgagtgaaaatgcctccaaatt |
28074320 |
T |
|
| Q |
150 |
ggttaagcatcttactgttctgtcactagtcaatccttgtccttgaagctttacttttttaccttctgcaagagaaacc |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| | || | ||| |||||| |||||||| ||||||||| ||||||||||| |
|
|
| T |
28074319 |
ggttaagcatcttactgttctgtcactaattaagtcatgttcttgaatctttacttgcttaccttctacaagagaaacc |
28074241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 327 - 556
Target Start/End: Complemental strand, 28533311 - 28533082
Alignment:
| Q |
327 |
tacctttgctttcaacagactgttcaagataccatcttagaagttcttcaccacaagcatccccttctgataatggaaccggaattccatcttctccgat |
426 |
Q |
| |
|
||||||||||| | ||| ||||||||||||||| | ||||||||||||||||||||||| ||||| ||||| | ||| |||||||| |||||| || |
|
|
| T |
28533311 |
tacctttgcttactgaagattgttcaagataccatgtaagaagttcttcaccacaagcatctccttcagataaagaaactccaattccattttctccaat |
28533212 |
T |
|
| Q |
427 |
gctctccaactttccacgcacaataaacaccaccttttgtacgagaccaccctgactcagaattctacttcctttaatgtatgtcgtctgtattagtctc |
526 |
Q |
| |
|
||||||||| ||||| ||||| | |||||||| |||| || | |||||||| ||||| |||| ||||||| || |||||||| | ||| |||||||| |
|
|
| T |
28533211 |
gctctccaattttcctcgcactacaaacaccatctttccaactacaccacccttactcataattttacttccatttatgtatgttttttgtcttagtctc |
28533112 |
T |
|
| Q |
527 |
tcacgaatggcatctaagataggttcatcc |
556 |
Q |
| |
|
|||| ||| |||||||| ||||| |||||| |
|
|
| T |
28533111 |
tcacaaattgcatctaaaataggctcatcc |
28533082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 82 - 216
Target Start/End: Complemental strand, 28017252 - 28017118
Alignment:
| Q |
82 |
aagaatcttgcaaaaagagtggtcacttcttcaatgtctttagcgcggagtgaaaatgcctcaacattggttaagcatcttactgttctgtcactagtca |
181 |
Q |
| |
|
|||| |||||||||| |||| || ||||||||||| |||||||| |||| |||||||||| |||| |||||||||| ||||||||||||||||||| | |
|
|
| T |
28017252 |
aagagtcttgcaaaatgagttgtgacttcttcaatagctttagcgtcgagtaaaaatgcctccacatcggttaagcattttactgttctgtcactagtta |
28017153 |
T |
|
| Q |
182 |
atccttgtccttgaagctttacttttttaccttct |
216 |
Q |
| |
|
| || |||||||||| |||||||| |||||||||| |
|
|
| T |
28017152 |
agccatgtccttgaatctttacttctttaccttct |
28017118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 672 - 748
Target Start/End: Complemental strand, 28034244 - 28034168
Alignment:
| Q |
672 |
attgttttagtttcattatgaatatgcacaaagctttgtcttgaaaattgttttctcattcaacttctattggattc |
748 |
Q |
| |
|
||||||||||||| | ||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
28034244 |
attgttttagtttaaagatgaatatgcataaagttttgtcttcaaaattgttttctcattcaacttctattggattc |
28034168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 877 - 972
Target Start/End: Complemental strand, 28033916 - 28033821
Alignment:
| Q |
877 |
acaaatttgaagagatggcgtctaatgtctttctggagatcttctggcaaattttctagagccatttcctcaggaacgccccttgttgcagcccaa |
972 |
Q |
| |
|
||||||||||||||||| |||| |||||| |||||||||||||||||||||| || ||| |||||| ||||| ||| || ||||||||||||||| |
|
|
| T |
28033916 |
acaaatttgaagagatgacgtcgtatgtctgtctggagatcttctggcaaattctccagaaccattttctcagaaacacctcttgttgcagcccaa |
28033821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 672 - 748
Target Start/End: Complemental strand, 28016432 - 28016356
Alignment:
| Q |
672 |
attgttttagtttcattatgaatatgcacaaagctttgtcttgaaaattgttttctcattcaacttctattggattc |
748 |
Q |
| |
|
|||||||| |||||| ||||||||||| |||| ||||| || || ||| ||||||||||||||||||||||||||| |
|
|
| T |
28016432 |
attgttttcgtttcaagatgaatatgcataaagttttgtattcaacattattttctcattcaacttctattggattc |
28016356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 672 - 748
Target Start/End: Complemental strand, 27915855 - 27915781
Alignment:
| Q |
672 |
attgttttagtttcattatgaatatgcacaaagctttgtcttgaaaattgttttctcattcaacttctattggattc |
748 |
Q |
| |
|
||||||||| ||||| ||||||||||| |||| ||||| | ||||||||||||||||||||||| |||||||||| |
|
|
| T |
27915855 |
attgttttaatttcaagatgaatatgcataaag--ttgtcctcaaaattgttttctcattcaacttatattggattc |
27915781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 350 - 462
Target Start/End: Complemental strand, 27896991 - 27896879
Alignment:
| Q |
350 |
tcaagataccatcttagaagttcttcaccacaagcatccccttctgataatggaaccggaattccatcttctccgatgctctccaactttccacgcacaa |
449 |
Q |
| |
|
|||||| ||||| | |||||||||||||||||| ||| ||||| |||| ||||| ||||||||||||| || || ||||| || ||||||||||| | |
|
|
| T |
27896991 |
tcaagacaccatgtaagaagttcttcaccacaaacattgccttcagatagaggaactcgaattccatcttcaccaatactctctaattttccacgcacga |
27896892 |
T |
|
| Q |
450 |
taaacaccacctt |
462 |
Q |
| |
|
|||| || ||||| |
|
|
| T |
27896891 |
taaaaacgacctt |
27896879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 972
Target Start/End: Complemental strand, 28000320 - 28000228
Alignment:
| Q |
880 |
aatttgaagagatggcgtctaatgtctttctggagatcttctggcaaattttctagagccatttcctcaggaacgccccttgttgcagcccaa |
972 |
Q |
| |
|
|||||||||| ||| |||| |||||| | |||||||||||||||||||| || | | ||||| ||||| ||| |||||||||||||||||| |
|
|
| T |
28000320 |
aatttgaagatatgacgtcgtatgtctatttggagatcttctggcaaattctccaaaatcattttctcagaaacaccccttgttgcagcccaa |
28000228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 220
Target Start/End: Complemental strand, 28533757 - 28533667
Alignment:
| Q |
130 |
agtgaaaatgcctcaacattggttaagcatcttactgttctgtcactagtcaatccttgtccttgaagctttacttttttaccttctgcaa |
220 |
Q |
| |
|
|||||||||||||| ||||| |||||||| ||||||| |||| ||| | |||| |||||| ||||| ||||||||||||| ||||||| |
|
|
| T |
28533757 |
agtgaaaatgcctccacatttgttaagcactttactgtcctgttgctaattaatctctgtcctggaagccttacttttttaccatctgcaa |
28533667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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