View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13067_high_15 (Length: 338)
Name: NF13067_high_15
Description: NF13067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13067_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 9 - 296
Target Start/End: Complemental strand, 2065455 - 2065171
Alignment:
| Q |
9 |
gaagaatatatggaaggagtatcaaccacacaccaagaaagagatgcatactaatgtgaacagcnnnnnnnnnnnngtgaacagtgtatctctctttctt |
108 |
Q |
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||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
2065455 |
gaagagtatagggaaggagtatcaaccacacaccaagaaagagatgcatactaatgtgaacagcaaaaaaaaa---gtgaacagtgtatctctctttctt |
2065359 |
T |
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| Q |
109 |
aaacaaaaaacctgaacacatttacttctgtacattcaatcaaataaattccatttccccaactccatccattaacattcaattcatggacccaattcct |
208 |
Q |
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| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
2065358 |
acacaaaaaacctgaacgcatttacttctgtacattcaatcaaataaattccatttccccaactccatccattaacattcaattcatgtacccaattcct |
2065259 |
T |
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| Q |
209 |
cacatgccactcacgtgccctctccctctcctatcctattttctcaaaccaaaacgaaattacacttaaaacattttcatgcacaaca |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
2065258 |
cacatgccactcacgtgccctctccctctcctatcctattttctcaaaccaaaacaaaattacacttaaaacattttcatgcacaaca |
2065171 |
T |
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