View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13067_low_20 (Length: 289)
Name: NF13067_low_20
Description: NF13067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13067_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 13 - 273
Target Start/End: Original strand, 32906259 - 32906519
Alignment:
| Q |
13 |
aatattcaccagactgaaaatacagttccactaacaaaaccatcatagtgctatgtacttatagccttagcaaagggaaattgctttgcttgattggttg |
112 |
Q |
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| T |
32906259 |
aatattcaccagactgaaaatacagttccactaacaaaaccatcatagtgctatgtacttatagccttagcaaagggaaattgctttgcttgattggttg |
32906358 |
T |
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| Q |
113 |
caaaaatttatcataatgatagtgatgatgaaattggacagtatgtcctttatttaaggtacattaaggttgaaattggatatatgtgatatgtgcatga |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32906359 |
caaaaatttatcataatgatagtgatgatgaaattggacagtatgtcctttatttaaggtacattaaggttgaaattggatatatgtgatatgtgcatga |
32906458 |
T |
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| Q |
213 |
ttgaataagcaatgagtatagcaccaattttggtttgagttatatattgaacgttatgtat |
273 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32906459 |
ttgaataagcaatgagtatagcaccaattttggtttgagttatatattgaacgttatgtat |
32906519 |
T |
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