View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13067_low_23 (Length: 280)
Name: NF13067_low_23
Description: NF13067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13067_low_23 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 174; Significance: 1e-93; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 19 - 232
Target Start/End: Original strand, 37701564 - 37701777
Alignment:
| Q |
19 |
cctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtat |
118 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37701564 |
cctcatttttgcatgatttagacaattggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtat |
37701663 |
T |
 |
| Q |
119 |
gattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagagg |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| |
|
|
| T |
37701664 |
gattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagccgcgggaatctcacccgtcaaacggttcctggagagg |
37701763 |
T |
 |
| Q |
219 |
tccaaccaccccaa |
232 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
37701764 |
tccaaccactccaa |
37701777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 37394168 - 37393946
Alignment:
| Q |
19 |
cctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtat |
118 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||| |||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
37394168 |
cctcatttttgcatgatttagacaattggaatccacacaacattgtattcccttcataagaatcatttccaaatgtatcaaattgttgacctgtaggtat |
37394069 |
T |
 |
| Q |
119 |
gattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagagg |
218 |
Q |
| |
|
|| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||| |
|
|
| T |
37394068 |
gactccctcaaggtggttttgtgaaaggtttaagaatgagaggaaattcaaatttgtcaaagccacgggaatctcacccttcaattggttccttgagagg |
37393969 |
T |
 |
| Q |
219 |
tccaaccaccccaaatgtctcaa |
241 |
Q |
| |
|
||||||||| | |||| |||||| |
|
|
| T |
37393968 |
tccaaccactctaaatttctcaa |
37393946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 25 - 227
Target Start/End: Complemental strand, 37383602 - 37383400
Alignment:
| Q |
25 |
ttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattcc |
124 |
Q |
| |
|
||||||||||||| |||||||| |||||||| |||||||||||||||||| |||||| ||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
37383602 |
ttttgcatgattttgacaatggaaatccacataacattgtatttccttcaaaggaatcatttccaaatgtaccaaactgttgacctgtaggtatgattcc |
37383503 |
T |
 |
| Q |
125 |
ctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtccaac |
224 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||||||||| ||| |||||||||||||||||| ||| |
|
|
| T |
37383502 |
ctcaaggtggttttgtgaaagattcaagaaagagagaaaattcaaatttgtcaaagccaaaggaatctcacccttcaattggttccttgagaggtctaac |
37383403 |
T |
 |
| Q |
225 |
cac |
227 |
Q |
| |
|
||| |
|
|
| T |
37383402 |
cac |
37383400 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 37531978 - 37532200
Alignment:
| Q |
19 |
cctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtat |
118 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||| |||||||||||||| ||||||||| ||| ||||||| |
|
|
| T |
37531978 |
cctcatttttgcatgatttagacaattggaatccacacaacattgtatttccttcaaaagaatcatttccaaatgtattaaactgttgacctttaggtat |
37532077 |
T |
 |
| Q |
119 |
gattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagagg |
218 |
Q |
| |
|
||||||||||||||||||||||||||| || |||| ||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||| | ||||||| |
|
|
| T |
37532078 |
gattccctcaaggtggttttgtgaaaggtttaagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttcaattggttgcatgagagg |
37532177 |
T |
 |
| Q |
219 |
tccaaccaccccaaatgtctcaa |
241 |
Q |
| |
|
||||||||| |||||| |||||| |
|
|
| T |
37532178 |
tccaaccactccaaatttctcaa |
37532200 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 37593082 - 37593304
Alignment:
| Q |
19 |
cctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtat |
118 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||| |||||||||||||| ||||||||| ||| ||||||| |
|
|
| T |
37593082 |
cctcatttttgcatgatttagacaattggaatccacacaacattgtatttccttcaaaagaatcatttccaaatgtattaaactgttgacctttaggtat |
37593181 |
T |
 |
| Q |
119 |
gattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagagg |
218 |
Q |
| |
|
||||||||||||||||||||||||||| || |||| ||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||| | ||||||| |
|
|
| T |
37593182 |
gattccctcaaggtggttttgtgaaaggtttaagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttcaattggttgcatgagagg |
37593281 |
T |
 |
| Q |
219 |
tccaaccaccccaaatgtctcaa |
241 |
Q |
| |
|
||||||||| |||||| |||||| |
|
|
| T |
37593282 |
tccaaccactccaaatttctcaa |
37593304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 24 - 267
Target Start/End: Original strand, 37434593 - 37434838
Alignment:
| Q |
24 |
tttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattc |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| |||| ||||| || |||||||||| || |
|
|
| T |
37434593 |
tttttgcatgatttagacaatgggaatccacataacattgtatttccttcataggaatcattttcaaatgtagcaaattgttgacccgtaggtatgactc |
37434692 |
T |
 |
| Q |
124 |
cctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtccaa |
223 |
Q |
| |
|
||||||||||||| | |||||| ||||||||||| ||||||||||||||||||||||| | |||||| |||||||||| ||||| |||||||||| || |
|
|
| T |
37434693 |
cctcaaggtggttgtttgaaaggttcaagaatgataggaaattcaaatttgtcaaagccacaggaatttcacccgtcaactggttttttgagaggtctaa |
37434792 |
T |
 |
| Q |
224 |
ccaccccaaatgtctcaatttactc--agatattggaatggtacct |
267 |
Q |
| |
|
|||| |||||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
37434793 |
ccactccaaatgtctcaatttactcaaagattgtggaatggtacct |
37434838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 37638624 - 37638846
Alignment:
| Q |
19 |
cctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtat |
118 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||| |||||||||||||| ||||||||| ||| ||||||| |
|
|
| T |
37638624 |
cctcatttttgcatgatttagacaattggaatccacacaacattgtatttccttcaaaagaatcatttccaaatgtattaaactgttgacctttaggtat |
37638723 |
T |
 |
| Q |
119 |
gattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagagg |
218 |
Q |
| |
|
|||||||||||| |||||||||||||| || |||| ||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||| | ||||||| |
|
|
| T |
37638724 |
gattccctcaagatggttttgtgaaaggtttaagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttcaattggttgcatgagagg |
37638823 |
T |
 |
| Q |
219 |
tccaaccaccccaaatgtctcaa |
241 |
Q |
| |
|
||||||||| |||||| |||||| |
|
|
| T |
37638824 |
tccaaccactccaaatttctcaa |
37638846 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 37710385 - 37710607
Alignment:
| Q |
19 |
cctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtat |
118 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||| |||||||||||||| ||||||||| ||| ||||||| |
|
|
| T |
37710385 |
cctcatttttgcatgatttagacaatggaaatccacacaacattgtatttccttcaaaagaatcatttccaaatgtattaaactgttgacctttaggtat |
37710484 |
T |
 |
| Q |
119 |
gattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagagg |
218 |
Q |
| |
|
|||||||||||| |||||||||||||| || |||| ||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||| | ||||||| |
|
|
| T |
37710485 |
gattccctcaagatggttttgtgaaaggtttaagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttcaattggttgcatgagagg |
37710584 |
T |
 |
| Q |
219 |
tccaaccaccccaaatgtctcaa |
241 |
Q |
| |
|
||||||||| |||||| |||||| |
|
|
| T |
37710585 |
tccaaccactccaaatttctcaa |
37710607 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 37402280 - 37402058
Alignment:
| Q |
19 |
cctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtat |
118 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||| |||| ||||||||| ||||||||| ||| ||||||| |
|
|
| T |
37402280 |
cctcatttttgcatgatttagacaattggaatccacacaacattgtatttccttcaaaagaatcattttcaaatgtattaaactgttgacctttaggtat |
37402181 |
T |
 |
| Q |
119 |
gattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagagg |
218 |
Q |
| |
|
|||||||||||| |||||||||||||| || |||| ||||||||| ||||||||||||||||| ||||||||||||||||| |||||| | ||||||| |
|
|
| T |
37402180 |
gattccctcaagatggttttgtgaaaggtttaagactgagaggaagttcaaatttgtcaaagcctcaggaatctcacccgtcaattggttgcatgagagg |
37402081 |
T |
 |
| Q |
219 |
tccaaccaccccaaatgtctcaa |
241 |
Q |
| |
|
||||||||| |||||| |||||| |
|
|
| T |
37402080 |
tccaaccactccaaatttctcaa |
37402058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 37822782 - 37823004
Alignment:
| Q |
19 |
cctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtat |
118 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |||||||||||||||||| | |||| |||||||||||||| ||||||||| ||| ||||||| |
|
|
| T |
37822782 |
cctcatttttgcatgatttagacaatggaaatccacataacattgtatttccttcaaaagaatcatttccaaatgtattaaactgttgacctttaggtat |
37822881 |
T |
 |
| Q |
119 |
gattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagagg |
218 |
Q |
| |
|
|||||||||||| |||||||||||||| || |||| ||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||| | ||||||| |
|
|
| T |
37822882 |
gattccctcaagatggttttgtgaaaggtttaagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttcaattggttgcatgagagg |
37822981 |
T |
 |
| Q |
219 |
tccaaccaccccaaatgtctcaa |
241 |
Q |
| |
|
||||||||| |||||| |||||| |
|
|
| T |
37822982 |
tccaaccactccaaatttctcaa |
37823004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 21 - 249
Target Start/End: Original strand, 37427930 - 37428163
Alignment:
| Q |
21 |
tcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatga |
120 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
37427930 |
tcatttttgcatgatttagacaatatgaatccacataacattgtattcccttcataggaatcatttccaaatgtatcaaactgttggccggtaggtatga |
37428029 |
T |
 |
| Q |
121 |
ttccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtc--att---tggttccttgag |
215 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||| | ||||||||||| ||| ||| |||||||||||| |
|
|
| T |
37428030 |
ttccctcaaggtggttttgtgagagattcaagaatgataggaaattcaaattttccaaagcggtgggaatctcacctgtcaaattaaatggttccttgag |
37428129 |
T |
 |
| Q |
216 |
aggtccaaccaccccaaatgtctcaatttactca |
249 |
Q |
| |
|
|||||||||||| |||| | ||||| ||||||| |
|
|
| T |
37428130 |
aggtccaaccactccaagtttctcagattactca |
37428163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 21 - 241
Target Start/End: Original strand, 37695475 - 37695695
Alignment:
| Q |
21 |
tcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatga |
120 |
Q |
| |
|
|||||||||||| || ||||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||| |||| ||||||||| ||| ||||||||| |
|
|
| T |
37695475 |
tcatttttgcataatctagacaatgggaatccacataacatagtattcccttcataggaatcatttccaaacgtattaaactgttgacctttaggtatga |
37695574 |
T |
 |
| Q |
121 |
ttccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtc |
220 |
Q |
| |
|
||||||||||||||||||||||||| || |||| ||||||||| ||||||||||||||||| | ||||||||| ||||||| |||||| | ||||||||| |
|
|
| T |
37695575 |
ttccctcaaggtggttttgtgaaagttttaagactgagaggaagttcaaatttgtcaaagccacaggaatctctcccgtcaattggttacatgagaggtc |
37695674 |
T |
 |
| Q |
221 |
caaccaccccaaatgtctcaa |
241 |
Q |
| |
|
||||||| |||| | |||||| |
|
|
| T |
37695675 |
caaccactccaattttctcaa |
37695695 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 19 - 249
Target Start/End: Original strand, 37439948 - 37440178
Alignment:
| Q |
19 |
cctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtat |
118 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||| |||| |||||| |
|
|
| T |
37439948 |
cctcatttttgcatggcttagacaatggatatccacataacattgtattcccttcataggaatcatttccaaatgtaccaaactgttgacctgcaggtat |
37440047 |
T |
 |
| Q |
119 |
gattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagagg |
218 |
Q |
| |
|
|||||||||| |||||||||||||||| || |||| ||||||||||||||||||||||||| | ||||| ||||| |||| |||||| ||||||||| |
|
|
| T |
37440048 |
gattccctcatggtggttttgtgaaaggtttaagacagagaggaaattcaaatttgtcaaagtcacgggaatttcaccggtcaattggtttcttgagagg |
37440147 |
T |
 |
| Q |
219 |
tccaaccaccccaaatgtctcaatttactca |
249 |
Q |
| |
|
||| ||||| | |||| |||||||||||||| |
|
|
| T |
37440148 |
tccgaccactctaaatttctcaatttactca |
37440178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 160; Significance: 3e-85; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 31 - 267
Target Start/End: Complemental strand, 16846933 - 16846695
Alignment:
| Q |
31 |
atgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattccctcaag |
130 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||| ||||||||| |
|
|
| T |
16846933 |
atgatttagacgatgggaatccacacaacattgtatttccttcataggaatcatttccaaatgtagaaaattgttgacctgtaggtatgactccctcaag |
16846834 |
T |
 |
| Q |
131 |
gtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtccaaccacccc |
230 |
Q |
| |
|
|||||||| |||||| |||||||| || ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||| || |
|
|
| T |
16846833 |
gtggttttttgaaaggttcaagaaagaaaggaaattcaaatttgtcaaagccacaggaatctctcccgtcatttggttccttgagaggtccaaccactcc |
16846734 |
T |
 |
| Q |
231 |
aaatgtctcaatttactc--agatattggaatggtacct |
267 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
16846733 |
aaatgtctcaatttactcaaagattgtggaatggtacct |
16846695 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 21 - 270
Target Start/End: Complemental strand, 24219011 - 24218760
Alignment:
| Q |
21 |
tcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatga |
120 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||| ||||||| ||||||||||||||||| |||||||||||| | ||| |||||||| |||||||||| |
|
|
| T |
24219011 |
tcatttttgcatgattttgacaatggaaatccacataacattgcatttccttcataggaatcatttccaaatgtgttaaattgttggccggtaggtatga |
24218912 |
T |
 |
| Q |
121 |
ttccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtc |
220 |
Q |
| |
|
|||||| || |||||||||||||| || || || |||||||||||||||||||||||||| |||||||||| ||| ||| | ||| ||||||||||| |
|
|
| T |
24218911 |
ttcccttgagatggttttgtgaaaggtttaaaaaagagaggaaattcaaatttgtcaaagccataggaatcttaccactcaagttgtttcttgagaggtc |
24218812 |
T |
 |
| Q |
221 |
caaccaccccaaatgtctcaatttactc--agatattggaatggtacctatg |
270 |
Q |
| |
|
||||||| |||||| || ||| |||||| |||| |||||||||||||||| |
|
|
| T |
24218811 |
caaccactccaaatttcgcaaattactcaaagattgtggaatggtacctatg |
24218760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 16844278 - 16844056
Alignment:
| Q |
19 |
cctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtat |
118 |
Q |
| |
|
|||||||||||||||| ||||| ||||| |||||||||||||||||||| |||| |||||||| |||||||||||||| ||| ||||| ||||||||||| |
|
|
| T |
16844278 |
cctcatttttgcatgaattagagaatggcaatccacacaacattgtattcccttgataggaatcatttccaaatgtattaaattgttgacctgtaggtat |
16844179 |
T |
 |
| Q |
119 |
gattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagagg |
218 |
Q |
| |
|
|||||| | || ||||||||||||||| || ||||| || |||||||||||||||| |||||| | ||||||| ||||||| |||||| | ||||||| |
|
|
| T |
16844178 |
gattcctttaaagtggttttgtgaaaggtttaagaaagaaaggaaattcaaatttgccaaagcctcaagaatctctcccgtcaattggttgcatgagagg |
16844079 |
T |
 |
| Q |
219 |
tccaaccaccccaaatgtctcaa |
241 |
Q |
| |
|
||||||||| |||||| |||||| |
|
|
| T |
16844078 |
tccaaccactccaaatttctcaa |
16844056 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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