View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13067_low_26 (Length: 230)
Name: NF13067_low_26
Description: NF13067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13067_low_26 |
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Alignment Details
Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 53175069 - 53174855
Alignment:
| Q |
1 |
attctagcaataggccaactatgtacaacaagtatttgtcatatattcggatttagctatatttttgctacatttccacatcagtccaaataaaatggcc |
100 |
Q |
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| T |
53175069 |
attctagcaataggccaactatgtacaacaagtattcgtcatatattcggatttagctatatttttgctacatttccacatcagtccaaataaaatggcc |
53174970 |
T |
|
| Q |
101 |
acatttgatgtgtaaccttctatcttgaattggtcgaagaggaattgaagtgataaaaatgtttaagctaccccgcaatcatccgcatcctttcaattcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53174969 |
acatttgatgtgtaaccttctatcttgaattggtcgaagaggaattgaagtgataacaatgtttaagctaccccgcaatcatccgcatcctttcaattcc |
53174870 |
T |
|
| Q |
201 |
aatatctgagataac |
215 |
Q |
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||||||||||||||| |
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| T |
53174869 |
aatatctgagataac |
53174855 |
T |
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