View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13067_low_3 (Length: 570)

Name: NF13067_low_3
Description: NF13067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13067_low_3
NF13067_low_3
[»] chr8 (50 HSPs)
chr8 (365-555)||(8410794-8410985)
chr8 (186-358)||(11287779-11287951)
chr8 (185-361)||(12353286-12353460)
chr8 (185-361)||(10007687-10007864)
chr8 (185-329)||(18978051-18978195)
chr8 (185-361)||(12351921-12352097)
chr8 (185-360)||(18979046-18979220)
chr8 (182-357)||(45112875-45113043)
chr8 (185-362)||(10006343-10006521)
chr8 (185-361)||(24122883-24123058)
chr8 (185-361)||(30335639-30335816)
chr8 (194-362)||(22220387-22220556)
chr8 (221-358)||(29968298-29968434)
chr8 (185-329)||(18970942-18971085)
chr8 (194-361)||(22221297-22221465)
chr8 (194-361)||(22227639-22227807)
chr8 (190-361)||(42982584-42982758)
chr8 (185-329)||(24123827-24123967)
chr8 (185-334)||(18488187-18488336)
chr8 (182-361)||(45114438-45114617)
chr8 (194-356)||(1824011-1824174)
chr8 (194-356)||(1858456-1858619)
chr8 (231-358)||(11282011-11282138)
chr8 (231-361)||(5513982-5514111)
chr8 (231-361)||(11283180-11283310)
chr8 (185-290)||(30570181-30570286)
chr8 (200-359)||(43661267-43661427)
chr8 (253-361)||(1823552-1823660)
chr8 (253-361)||(1857997-1858105)
chr8 (230-361)||(8388464-8388593)
chr8 (185-297)||(30568950-30569062)
chr8 (195-363)||(36249550-36249718)
chr8 (187-361)||(30336427-30336602)
chr8 (185-361)||(43661747-43661924)
chr8 (230-358)||(8389659-8389787)
chr8 (185-240)||(17844395-17844450)
chr8 (4-77)||(39889340-39889410)
chr8 (4-64)||(28977933-28977990)
chr8 (223-359)||(29043400-29043536)
chr8 (304-362)||(24483142-24483200)
chr8 (284-361)||(5514294-5514370)
chr8 (69-110)||(28977860-28977901)
chr8 (244-329)||(32207309-32207394)
chr8 (231-361)||(32968456-32968586)
chr8 (244-329)||(24488664-24488748)
chr8 (310-362)||(3819488-3819539)
chr8 (193-237)||(11288831-11288875)
chr8 (305-361)||(11456638-11456694)
chr8 (278-362)||(38974794-38974878)
chr8 (278-362)||(39005892-39005976)
[»] scaffold0302 (3 HSPs)
scaffold0302 (182-361)||(17470-17649)
scaffold0302 (1-113)||(17720-17832)
scaffold0302 (185-363)||(18701-18879)
[»] chr2 (44 HSPs)
chr2 (185-361)||(36449778-36449954)
chr2 (187-358)||(7898694-7898865)
chr2 (185-358)||(36450846-36451018)
chr2 (185-361)||(38840418-38840594)
chr2 (185-361)||(38839242-38839418)
chr2 (192-361)||(7899814-7899983)
chr2 (185-361)||(41879137-41879313)
chr2 (185-361)||(13570482-13570658)
chr2 (185-361)||(22587879-22588054)
chr2 (185-362)||(41878091-41878264)
chr2 (197-361)||(11257622-11257786)
chr2 (185-361)||(22848191-22848368)
chr2 (230-362)||(18299372-18299504)
chr2 (185-297)||(22587564-22587676)
chr2 (231-361)||(11938760-11938889)
chr2 (185-361)||(11258735-11258912)
chr2 (244-361)||(23869519-23869635)
chr2 (185-358)||(8534586-8534758)
chr2 (185-358)||(26544152-26544325)
chr2 (185-361)||(16446154-16446330)
chr2 (194-361)||(18797246-18797415)
chr2 (244-361)||(18904367-18904484)
chr2 (185-361)||(802516-802691)
chr2 (185-329)||(810706-810850)
chr2 (185-361)||(18905912-18906088)
chr2 (256-358)||(8535652-8535752)
chr2 (185-329)||(13568004-13568148)
chr2 (230-344)||(24475241-24475355)
chr2 (185-358)||(28617926-28618098)
chr2 (284-361)||(18868924-18869001)
chr2 (194-360)||(13030293-13030457)
chr2 (278-361)||(32739623-32739706)
chr2 (185-329)||(26545445-26545590)
chr2 (196-323)||(27553701-27553827)
chr2 (185-297)||(32739715-32739827)
chr2 (266-361)||(1034475-1034570)
chr2 (185-321)||(18869086-18869224)
chr2 (4-62)||(8972574-8972629)
chr2 (6-62)||(20440127-20440180)
chr2 (6-62)||(20445732-20445785)
chr2 (279-333)||(24476863-24476917)
chr2 (6-62)||(35780107-35780160)
chr2 (279-327)||(18300743-18300791)
chr2 (305-361)||(26829333-26829389)
[»] chr3 (64 HSPs)
chr3 (185-361)||(54540715-54540891)
chr3 (187-358)||(7268754-7268924)
chr3 (185-361)||(22776737-22776913)
chr3 (187-358)||(7267647-7267817)
chr3 (185-361)||(55191920-55192095)
chr3 (185-361)||(19984849-19985025)
chr3 (185-361)||(54539755-54539931)
chr3 (185-361)||(19985995-19986173)
chr3 (185-291)||(22775816-22775922)
chr3 (197-360)||(8456479-8456642)
chr3 (185-337)||(34940112-34940264)
chr3 (194-361)||(51038723-51038891)
chr3 (195-361)||(7758402-7758569)
chr3 (185-361)||(29931226-29931403)
chr3 (185-361)||(29980380-29980557)
chr3 (185-362)||(49216246-49216423)
chr3 (185-361)||(53614819-53614995)
chr3 (185-297)||(10457604-10457716)
chr3 (232-363)||(46719939-46720070)
chr3 (185-362)||(47614184-47614362)
chr3 (189-358)||(49398130-49398298)
chr3 (194-362)||(51037535-51037703)
chr3 (230-362)||(51469971-51470103)
chr3 (185-361)||(12700175-12700350)
chr3 (185-338)||(4271463-4271616)
chr3 (187-328)||(55191544-55191684)
chr3 (185-329)||(31645005-31645149)
chr3 (229-362)||(52840573-52840706)
chr3 (230-358)||(47610550-47610678)
chr3 (259-357)||(24516464-24516562)
chr3 (192-358)||(39843054-39843220)
chr3 (194-291)||(47615510-47615608)
chr3 (256-361)||(29932695-29932799)
chr3 (256-361)||(29981849-29981953)
chr3 (198-361)||(47609697-47609861)
chr3 (185-241)||(49220477-49220533)
chr3 (185-361)||(52839037-52839213)
chr3 (185-361)||(12703424-12703600)
chr3 (200-358)||(23770346-23770505)
chr3 (197-361)||(8875906-8876071)
chr3 (196-339)||(11670406-11670550)
chr3 (425-473)||(19543733-19543781)
chr3 (266-329)||(534531-534594)
chr3 (185-358)||(34019069-34019241)
chr3 (230-361)||(46721190-46721321)
chr3 (259-361)||(5029682-5029783)
chr3 (303-361)||(47615591-47615649)
chr3 (256-358)||(53616012-53616114)
chr3 (194-358)||(51347271-51347436)
chr3 (196-287)||(10583976-10584067)
chr3 (4-62)||(18009876-18009931)
chr3 (185-292)||(26722601-26722708)
chr3 (185-269)||(49401413-49401497)
chr3 (232-361)||(11671313-11671441)
chr3 (185-358)||(54986931-54987103)
chr3 (232-290)||(53897173-53897231)
chr3 (265-362)||(535787-535884)
chr3 (301-361)||(5001200-5001260)
chr3 (185-240)||(6171168-6171223)
chr3 (278-361)||(28263129-28263212)
chr3 (185-271)||(32829829-32829915)
chr3 (230-361)||(51470425-51470555)
chr3 (185-288)||(26723786-26723889)
chr3 (263-362)||(53901391-53901488)
[»] chr5 (42 HSPs)
chr5 (185-361)||(40255597-40255773)
chr5 (185-361)||(28538676-28538852)
chr5 (185-361)||(36486413-36486589)
chr5 (185-358)||(28539745-28539917)
chr5 (185-361)||(33160212-33160387)
chr5 (185-359)||(36485302-36485476)
chr5 (185-361)||(18486826-18487003)
chr5 (185-358)||(24332916-24333089)
chr5 (185-361)||(25523069-25523246)
chr5 (185-361)||(16650779-16650956)
chr5 (185-361)||(1797222-1797397)
chr5 (185-358)||(20216687-20216861)
chr5 (185-361)||(19752912-19753088)
chr5 (190-362)||(22940552-22940724)
chr5 (185-353)||(1015492-1015660)
chr5 (185-362)||(20214195-20214372)
chr5 (185-362)||(1796053-1796231)
chr5 (185-361)||(19754054-19754232)
chr5 (185-358)||(1016789-1016961)
chr5 (194-361)||(25055412-25055580)
chr5 (185-361)||(18485138-18485322)
chr5 (194-358)||(42195137-42195300)
chr5 (185-320)||(25524022-25524158)
chr5 (230-361)||(5778806-5778937)
chr5 (266-365)||(25056387-25056486)
chr5 (185-291)||(5961476-5961582)
chr5 (187-308)||(16650045-16650167)
chr5 (281-361)||(25524148-25524229)
chr5 (185-276)||(14061537-14061628)
chr5 (231-333)||(2686372-2686474)
chr5 (230-329)||(5730832-5730931)
chr5 (266-329)||(7311622-7311685)
chr5 (244-361)||(5777901-5778016)
chr5 (244-318)||(21835083-21835157)
chr5 (279-361)||(33158098-33158180)
chr5 (301-361)||(5730441-5730502)
chr5 (427-508)||(20424871-20424952)
chr5 (183-274)||(24468509-24468601)
chr5 (194-361)||(42196133-42196301)
chr5 (427-510)||(12402285-12402368)
chr5 (303-362)||(41663768-41663827)
chr5 (230-358)||(2186774-2186901)
[»] chr6 (31 HSPs)
chr6 (185-361)||(10784592-10784770)
chr6 (185-356)||(29473082-29473253)
chr6 (187-361)||(14822360-14822534)
chr6 (185-358)||(1829528-1829701)
chr6 (185-361)||(16704422-16704598)
chr6 (187-361)||(14823502-14823677)
chr6 (185-329)||(26574979-26575123)
chr6 (185-361)||(7316218-7316395)
chr6 (185-333)||(10785838-10785986)
chr6 (185-362)||(7314879-7315056)
chr6 (230-361)||(8659265-8659396)
chr6 (230-361)||(27437828-27437959)
chr6 (230-358)||(34834549-34834677)
chr6 (214-361)||(26574619-26574765)
chr6 (230-358)||(5658759-5658887)
chr6 (230-361)||(8660174-8660304)
chr6 (194-360)||(12382644-12382811)
chr6 (244-361)||(8821873-8821990)
chr6 (230-361)||(3721612-3721743)
chr6 (244-362)||(8822777-8822895)
chr6 (185-342)||(26949110-26949264)
chr6 (259-361)||(27322067-27322168)
chr6 (311-361)||(1828739-1828789)
chr6 (185-362)||(16703569-16703734)
chr6 (231-361)||(17496793-17496928)
chr6 (194-291)||(26717046-26717144)
chr6 (244-329)||(3333010-3333095)
chr6 (260-327)||(12350832-12350898)
chr6 (310-361)||(27447963-27448014)
chr6 (187-228)||(13345682-13345723)
chr6 (285-361)||(6842308-6842384)
[»] chr4 (51 HSPs)
chr4 (185-361)||(31599789-31599965)
chr4 (185-362)||(31600910-31601087)
chr4 (185-358)||(35935458-35935631)
chr4 (185-361)||(52491534-52491708)
chr4 (185-358)||(8758766-8758935)
chr4 (185-361)||(10448185-10448361)
chr4 (194-361)||(1290131-1290299)
chr4 (229-361)||(1963196-1963328)
chr4 (185-358)||(35934347-35934518)
chr4 (185-361)||(17388135-17388311)
chr4 (212-361)||(8757675-8757822)
chr4 (186-361)||(10447006-10447182)
chr4 (185-362)||(50909597-50909775)
chr4 (185-361)||(17382993-17383169)
chr4 (194-361)||(1835035-1835203)
chr4 (185-358)||(12129626-12129800)
chr4 (258-348)||(21539069-21539159)
chr4 (194-362)||(1964374-1964543)
chr4 (230-359)||(19750545-19750673)
chr4 (230-359)||(19789133-19789261)
chr4 (230-362)||(10471358-10471490)
chr4 (194-362)||(1834118-1834288)
chr4 (185-297)||(21178060-21178172)
chr4 (230-366)||(25684929-25685065)
chr4 (186-361)||(13509284-13509459)
chr4 (230-361)||(5526096-5526226)
chr4 (230-361)||(10470546-10470677)
chr4 (230-361)||(25685792-25685923)
chr4 (185-240)||(46637804-46637859)
chr4 (244-361)||(48780248-48780365)
chr4 (230-361)||(5525360-5525490)
chr4 (199-361)||(26421561-26421722)
chr4 (230-358)||(37728535-37728662)
chr4 (190-358)||(1289100-1289269)
chr4 (185-272)||(54107948-54108035)
chr4 (279-361)||(49308046-49308127)
chr4 (230-361)||(13386502-13386634)
chr4 (185-290)||(8896835-8896940)
chr4 (230-361)||(13386014-13386147)
chr4 (185-358)||(8155741-8155914)
chr4 (278-358)||(33296227-33296306)
chr4 (185-358)||(55603456-55603628)
chr4 (4-62)||(44890878-44890933)
chr4 (285-361)||(50909273-50909348)
chr4 (230-281)||(2193425-2193476)
chr4 (258-361)||(3928856-3928959)
chr4 (231-353)||(46638696-46638817)
chr4 (310-364)||(51291421-51291475)
chr4 (6-35)||(43242654-43242683)
chr4 (313-361)||(20919584-20919632)
chr4 (185-237)||(50909386-50909438)
[»] chr1 (59 HSPs)
chr1 (187-362)||(39699694-39699868)
chr1 (185-362)||(36613828-36614006)
chr1 (185-358)||(39153041-39153214)
chr1 (185-362)||(45148580-45148756)
chr1 (185-358)||(45149895-45150068)
chr1 (197-361)||(24422800-24422965)
chr1 (185-358)||(39151934-39152107)
chr1 (194-361)||(11436042-11436210)
chr1 (189-361)||(39698563-39698734)
chr1 (185-326)||(44411891-44412032)
chr1 (230-363)||(51684364-51684497)
chr1 (197-377)||(52274952-52275133)
chr1 (190-361)||(11437128-11437300)
chr1 (185-329)||(44404474-44404618)
chr1 (185-361)||(14999285-14999457)
chr1 (185-358)||(50680335-50680508)
chr1 (185-361)||(14999876-15000056)
chr1 (185-358)||(37526802-37526975)
chr1 (214-361)||(45157163-45157309)
chr1 (230-367)||(24426045-24426182)
chr1 (194-361)||(35594217-35594383)
chr1 (231-361)||(35066973-35067103)
chr1 (185-358)||(43378637-43378810)
chr1 (185-361)||(36612853-36613029)
chr1 (185-329)||(52276087-52276232)
chr1 (230-362)||(41364828-41364959)
chr1 (198-361)||(52827347-52827511)
chr1 (230-358)||(52828040-52828168)
chr1 (185-362)||(39222397-39222576)
chr1 (194-361)||(35595125-35595294)
chr1 (231-329)||(43058817-43058915)
chr1 (427-555)||(20424954-20425083)
chr1 (252-361)||(23980458-23980567)
chr1 (230-358)||(7983053-7983180)
chr1 (190-287)||(46525730-46525827)
chr1 (258-347)||(7675457-7675546)
chr1 (185-361)||(12389906-12390082)
chr1 (185-281)||(16281227-16281321)
chr1 (185-361)||(16290093-16290270)
chr1 (232-362)||(50681580-50681706)
chr1 (244-361)||(51685749-51685866)
chr1 (185-339)||(43377742-43377897)
chr1 (212-338)||(40384748-40384874)
chr1 (217-358)||(45156052-45156193)
chr1 (305-361)||(21185208-21185264)
chr1 (185-329)||(33088099-33088243)
chr1 (230-361)||(41366101-41366231)
chr1 (185-292)||(14512547-14512654)
chr1 (194-287)||(46524613-46524706)
chr1 (284-361)||(7674528-7674603)
chr1 (229-282)||(17505040-17505093)
chr1 (252-329)||(33088609-33088686)
chr1 (185-271)||(39221404-39221491)
chr1 (194-240)||(46312185-46312232)
chr1 (312-361)||(11190385-11190434)
chr1 (305-361)||(21945708-21945763)
chr1 (185-248)||(21946523-21946587)
chr1 (198-329)||(43059943-43060075)
chr1 (230-373)||(46066513-46066653)
[»] scaffold2034 (2 HSPs)
scaffold2034 (185-363)||(231-409)
scaffold2034 (185-340)||(903-1058)
[»] chr7 (35 HSPs)
chr7 (185-361)||(22629483-22629663)
chr7 (185-361)||(7500455-7500631)
chr7 (185-333)||(14999080-14999228)
chr7 (185-361)||(7501776-7501953)
chr7 (185-361)||(11658379-11658556)
chr7 (197-362)||(31659621-31659788)
chr7 (194-362)||(18371423-18371592)
chr7 (185-361)||(769413-769589)
chr7 (224-358)||(11662515-11662649)
chr7 (185-337)||(18372381-18372534)
chr7 (185-361)||(34352711-34352887)
chr7 (198-358)||(42886224-42886384)
chr7 (230-361)||(31949322-31949453)
chr7 (185-329)||(34351524-34351664)
chr7 (230-361)||(3227564-3227695)
chr7 (230-362)||(47525337-47525469)
chr7 (195-293)||(14998048-14998145)
chr7 (256-362)||(48934899-48935005)
chr7 (230-361)||(31949772-31949903)
chr7 (230-360)||(3227109-3227238)
chr7 (198-359)||(17781663-17781825)
chr7 (231-361)||(22630423-22630553)
chr7 (185-361)||(47369781-47369958)
chr7 (192-290)||(770693-770791)
chr7 (230-361)||(127337-127466)
chr7 (195-333)||(6618235-6618374)
chr7 (185-359)||(46482599-46482774)
chr7 (4-64)||(33131956-33132013)
chr7 (230-358)||(128571-128699)
chr7 (265-361)||(17782558-17782654)
chr7 (185-291)||(32253352-32253458)
chr7 (282-366)||(43899443-43899525)
chr7 (69-105)||(33131885-33131921)
chr7 (244-361)||(21505416-21505531)
chr7 (289-361)||(20163585-20163657)
[»] scaffold0320 (1 HSPs)
scaffold0320 (185-361)||(19488-19665)
[»] scaffold0059 (2 HSPs)
scaffold0059 (185-342)||(3694-3851)
scaffold0059 (185-360)||(4655-4829)
[»] scaffold0632 (1 HSPs)
scaffold0632 (185-361)||(3233-3408)
[»] scaffold0019 (2 HSPs)
scaffold0019 (230-360)||(61429-61559)
scaffold0019 (230-362)||(60089-60221)
[»] scaffold0294 (1 HSPs)
scaffold0294 (230-361)||(5408-5539)
[»] scaffold0045 (1 HSPs)
scaffold0045 (285-362)||(49109-49186)
[»] scaffold1303 (1 HSPs)
scaffold1303 (194-361)||(1439-1607)
[»] scaffold0003 (2 HSPs)
scaffold0003 (230-361)||(49403-49534)
scaffold0003 (310-361)||(39344-39395)
[»] scaffold0321 (1 HSPs)
scaffold0321 (194-359)||(18730-18896)
[»] scaffold0049 (1 HSPs)
scaffold0049 (244-361)||(7399-7516)
[»] scaffold0112 (1 HSPs)
scaffold0112 (230-362)||(37147-37278)
[»] scaffold0586 (2 HSPs)
scaffold0586 (185-358)||(6346-6509)
scaffold0586 (231-361)||(8998-9126)
[»] scaffold0186 (1 HSPs)
scaffold0186 (185-362)||(23080-23255)
[»] scaffold0093 (2 HSPs)
scaffold0093 (230-360)||(2435-2564)
scaffold0093 (230-360)||(7058-7187)
[»] scaffold0227 (1 HSPs)
scaffold0227 (278-362)||(137-221)


Alignment Details
Target: chr8 (Bit Score: 152; Significance: 3e-80; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 365 - 555
Target Start/End: Original strand, 8410794 - 8410985
Alignment:
Q  365 tttgtattattatcatcattaaaatcaaccacgtgtcaaaattatatcaaaccactttggtgggatttaaaacctctttggaaacctcgacaatagagga 464  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  8410794 tttgtattattatcatcattaaaatcaatcacgtgtcaaaattatatgaaaccactttagtgggatttaaaacctctttggaaacctcgacattagagga 8410893  T
Q  465 acccaaaccacaccaagatggtggttcttgaatatagtccaagtatgctacg-ggacactccagggaccaacaatgtgcatatcaagaaatt 555  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||| |||||||||||||||||||||||||||||||    
T  8410894 acccaaaccacaccaagatggtggttcttgaatatagtccaaatatgttacgacgacacttcagggaccaacaatgtgcatatcaagaaatt 8410985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 186 - 358
Target Start/End: Complemental strand, 11287951 - 11287779
Alignment:
Q  186 taattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcca 285  Q
    |||||||||||||||||| |||||||||| | ||||| |||||||||||||||||||||||| ||||||||||||||||| | |||||||| ||||||||    
T  11287951 taattcaataattacacatgtggcatgccgcataggcgttgaccggtcaaaattgataaaaatgatcaaaattgcaaaggagttaattcttagggggcca 11287852  T
Q  286 aaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    |||||||||||||| |||||||  |||||||||||||||||||| ||| ||| ||| | |||| |||||||||    
T  11287851 aaattgtagtttctgtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 12353286 - 12353460
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| ||||||||||||||||||| |||| ||| |||||||||||||||||||||  ||||| || |||||||||| |||||||| |||| |||||||    
T  12353286 ttaattaaataattacacacgtggcacgccatgtaagcattgaccggtcaaaattgaccaaaagaattaaaattgcaatggggctaaatcttagggggcc 12353385  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||| |||||| | |||||||| |||||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  12353386 aaaattatagttt-tgtacttagggggccaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcactttagcc 12353460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 10007687 - 10007864
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||  ||||||| ||||  |||||||||||||| |||| |||| |    
T  10007687 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgacgaaaaggaccaaagatgcaaaggggctaaatcttaggggac 10007786  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  10007787 caaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 10007864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 185 - 329
Target Start/End: Complemental strand, 18978195 - 18978051
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||||  ||||||||||||| ||||||||||||||| ||||  ||||||    
T  18978195 ttaatttaataattagacacgtggcgtgccacgtaggcattgacccgtcaaaattggaaaaaaggatcaaagttgcaaaggggctaaatcttaaggggcc 18978096  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||| | |||||||| ||||||||||| ||| ||||    
T  18978095 aaaattgtagtttttgtacttagggggccaaaattgaaagatttt 18978051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 12352097 - 12351921
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||||||||||| || ||||| || ||||||||||||||||||||   |||||| | |||||||||| | |||||| |||| ||||| |    
T  12352097 ttaattaaataattacacacgtgacacgccacatatgcattgaccggtcaaaattgtccaaaagggttaaaattgcaatgaggctaaatcttagggggtc 12351998  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | |||||||| || ||||||||||| ||||| ||| ||||||| || ||||||||||||||||    
T  12351997 aaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttagcc 12351921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 185 - 360
Target Start/End: Original strand, 18979046 - 18979220
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| ||||||||||||| ||||| | || ||||||||||||| ||||||||||  ||||||||||||| ||||||| ||||||| || |  ||||||    
T  18979046 ttaatttaataattacacacatggca-gtcatgtaggcattgacctgtcaaaattggcaaaaaggatcaaagttgcaaatgggctaaatcataaggggcc 18979144  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagc 360  Q
    ||||||||||||| |||| ||||| ||||||||||||||||| || ||| ||| ||| |||||| |||||||||||    
T  18979145 aaaattgtagtttttatatttagggggccaaaattgcaagttgttgaaagttagggggggaaaagtgcactttagc 18979220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 182 - 357
Target Start/End: Complemental strand, 45113043 - 45112875
Alignment:
Q  182 aaattaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggg 281  Q
    ||||||||||||||||||||||||||     ||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  45113043 aaattaattcaataattacacacgtg-----ccacgtaggtattgaccagtcaaaattgataaaaaagatcaaaattgcaaaggggctaattcttagggg 45112949  T
Q  282 gccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttt 357  Q
     |||||||| || ||| | |||||| ||| | |||||| ||| ||||| ||| || ||||||||||||||||||||    
T  45112948 accaaaattataatttttgtactta-gagactaaaattacaaatttttgaaagtt-agggaggaaaaatgcacttt 45112875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 185 - 362
Target Start/End: Complemental strand, 10006521 - 10006343
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||  ||||||| ||||  |||||||||||||| |||| ||||||    
T  10006521 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggc 10006422  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||||||| ||||  ||||||||| |||||||||||||||||||| ||| |||  || |||||| |||||||||||||    
T  10006421 caaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcca 10006343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 24123058 - 24122883
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| ||||||||||||| || | |||||||||||||||||||||||||||||||  ||||||| ||||  |||||||  ||||| |||| |||| |     
T  24123058 ttaatttaataattacacacatgtcgtgccacgtaggcattgaccggtcaaaattgaccaaaaggaccaaagatgcaaagaagctaaatcttaggggact 24122959  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||| |||||| | |||||||| || ||||||||||| ||||| ||| || |||| |||||||||||||||||||    
T  24122958 aaaattatagtttttgtacttagggggtcaaaattgcaaattttttaaagtt-aggggggaaaaatgcactttagcc 24122883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 30335816 - 30335639
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||||| || ||||||| ||||||||||||  | || |||||  ||||||||||||  ||||||| ||||  |||||||||||||| |||| |||||     
T  30335816 ttaattcattatttacacatgtggcatgccacacatgcgttgacttggtcaaaattgaacaaaaggaccaaagatgcaaaggggctaaatcttagggggt 30335717  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||||||||| ||| | |||||||   ||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  30335716 taaaattgtaatttttgtacttagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcactttagcc 30335639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 194 - 362
Target Start/End: Complemental strand, 22220556 - 22220387
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgaccgg-tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    ||||||||||||||||||||||  |  ||||||||  | ||||||||||| ||||||| ||||  |||||| ||||||| |||| |||||||||||||||    
T  22220556 taattacacacgtggcatgccaaatcagcattgacttgctcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgt 22220457  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||| ||||| |||| || ||||||||||||| ||| ||| |||  || |||||| |||||||||||||    
T  22220456 agtttttatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcactttagcca 22220387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 221 - 358
Target Start/End: Original strand, 29968298 - 29968434
Alignment:
Q  221 gcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattg 320  Q
    ||||||||||||||||||||   |||| ||| ||| |||||| |||||||| |||| |||| ||| ||||||||||| | |||||||| |||||||||||    
T  29968298 gcattgaccggtcaaaattggccaaaatgattaaagttgcaatggggctaaatcttaggggaccagaattgtagtttttgtacttagggggccaaaattg 29968397  T
Q  321 caagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    ||||||||||||| ||||||| |||||| |||||||||    
T  29968398 caagtttttaaaagttaaggg-ggaaaagtgcacttta 29968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 185 - 329
Target Start/End: Complemental strand, 18971085 - 18970942
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| ||||||||||||| ||||| | || ||||||||||||||||||||||||  |||||||| |||| ||||||||||| ||| ||||  |||| |    
T  18971085 ttaatttaataattacacacatggca-gtcatgtaggcattgaccggtcaaaattggcaaaaaggaccaaagttgcaaaggggttaaatcttcaggggtc 18970987  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||| | |||||||| ||||||||||| ||| ||||    
T  18970986 aaaattgtagtttttgtacttagggggccaaaattgaaagatttt 18970942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 194 - 361
Target Start/End: Original strand, 22221297 - 22221465
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    |||||||||||||||||| |||  || || ||||||  ||||||||||   ||||||||||||  || ||||||||||| |||| ||||| |||||||||    
T  22221297 taattacacacgtggcataccaaataagcgttgaccaagtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgt 22221396  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||  ||||||||| || ||||||||||||||||| ||| ||| ||| |||||| ||||||||||||    
T  22221397 agttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 22221465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 194 - 361
Target Start/End: Original strand, 22227639 - 22227807
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    |||||||||||||||||| |||  || || ||||||  ||||||||||   ||||||||||||  || ||||||||||| |||| ||||| |||||||||    
T  22227639 taattacacacgtggcataccaaataagcgttgaccaagtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgt 22227738  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||  ||||||||| || ||||||||||||||||| ||| ||| ||| |||||| ||||||||||||    
T  22227739 agttttaatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 22227807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 190 - 361
Target Start/End: Original strand, 42982584 - 42982758
Alignment:
Q  190 tcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattg---ataaaaaggatcaaaattgcaaaggggctaattcttggggggccaa 286  Q
    ||||||||||||||||| || | |||| ||||| |||||||||||||||||   | ||||| ||||||||||| ||| ||||||||||||| |||| |||    
T  42982584 tcaataattacacacgtagcgtaccacataggctttgaccggtcaaaattggcaaaaaaaatgatcaaaattgtaaatgggctaattcttgaggggtcaa 42982683  T
Q  287 aattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||| | |    ||| |||||||||| ||| ||||||||| |||| || |||||| ||||||||||||    
T  42982684 aattgtagtttttgtttacagggggccaaaattacaactttttaaaacttaaaggtggaaaagtgcactttagcc 42982758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 185 - 329
Target Start/End: Original strand, 24123827 - 24123967
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||||||||||||| |||||||    |||| |||||||||||||||  ||||||| ||||  |||||||||||||| |||| || |||     
T  24123827 ttaatttaataattacacacgtggcgtgccacg----cattaaccggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggaggct 24123922  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||| |||   |||||| ||||||||||||||||||||||    
T  24123923 aaaattgtaattttagtacttaagaggccaaaattgcaagttttt 24123967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 185 - 334
Target Start/End: Original strand, 18488187 - 18488336
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||||||||||||||||  ||||||||||||||||||||||| |||||||| || | ||||||| ||||  |||||||||| ||  |||| | |||||    
T  18488187 ttaattcaataattacacatttggcatgccacgtaggcattgactggtcaaaactggtcaaaaggaccaaagatgcaaaggggttatatcttagagggcc 18488286  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaa 334  Q
    ||||||||||||| | ||  |||| | | |||||||||| ||||| ||||    
T  18488287 aaaattgtagtttttgtatataggggactaaaattgcaacttttttaaaa 18488336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 182 - 361
Target Start/End: Original strand, 45114438 - 45114617
Alignment:
Q  182 aaattaattc-aataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttgggg 280  Q
    |||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||| |  |||| ||| ||| |||||| | || ||| ||||  |     
T  45114438 aaattaattccaataattacacacgtggtgtgccacgtaggcattgaccggtcaaaattaaccaaaatgattaaagttgcaatgaggttaaatctt-aga 45114536  T
Q  281 ggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||||||| | ||| |||    |||||||||||||||||| ||| ||| ||| |||||| ||||||| ||||    
T  45114537 ggccaaaattgtagtttgtgtacatagtgaaccaaaattgcaagtttttgaaagttaggggcggaaaagtgcacttcagcc 45114617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 194 - 356
Target Start/End: Original strand, 1824011 - 1824174
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    |||||||||| ||||| | |||||||||| ||||    |||||||||||  ||||||| ||||  ||||||  |||||| |||| |||||||||||||||    
T  1824011 taattacacatgtggcctaccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgt 1824110  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactt 356  Q
    ||||| | |||||||| | |||||||||||||||||| ||| |||  || ||||||||||||||    
T  1824111 agtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 194 - 356
Target Start/End: Original strand, 1858456 - 1858619
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    |||||||||| ||||| | |||||||||| ||||    |||||||||||  ||||||| ||||  ||||||  |||||| |||| |||||||||||||||    
T  1858456 taattacacatgtggcctaccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgt 1858555  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactt 356  Q
    ||||| | |||||||| | |||||||||||||||||| ||| |||  || ||||||||||||||    
T  1858556 agtttttgtacttaggggaccaaaattgcaagtttttgaaagttagagggggaaaaatgcactt 1858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 231 - 358
Target Start/End: Complemental strand, 11282138 - 11282011
Alignment:
Q  231 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 330  Q
    |||||||||||| |||| ||||||||||||||||||| ||| |||| ||||| |||||||||  ||| | ||  |||| |||||||||||||| ||||||    
T  11282138 gtcaaaattgatcaaaaagatcaaaattgcaaaggggttaaatcttagggggtcaaaattgtcatttttgtatatagggggccaaaattgcaacttttta 11282039  T
Q  331 aaaattaagggaggaaaaatgcacttta 358  Q
    ||| ||||||| | |||| |||||||||    
T  11282038 aaagttaagggggaaaaagtgcacttta 11282011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 231 - 361
Target Start/End: Complemental strand, 5514111 - 5513982
Alignment:
Q  231 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 330  Q
    |||||||||||| ||||||| ||||  |||||||||||||| | || ||||| |||||||||||||| | |||||||| ||||||||||| ||||||||     
T  5514111 gtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaattttaggggggcaaaattgtagtttttgtacttagggggccaaaattggaagtttttg 5514012  T
Q  331 aaaattaagggaggaaaaatgcactttagcc 361  Q
    ||| || |||| | |||| ||||||||||||    
T  5514011 aaagtt-agggggtaaaagtgcactttagcc 5513982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 231 - 361
Target Start/End: Original strand, 11283180 - 11283310
Alignment:
Q  231 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 330  Q
    |||||||||||  |||| ||||||||||||||||||||||| | || |||| ||||||||||  ||| ||||| |||| ||| |||||| ||| |||||     
T  11283180 gtcaaaattgactaaaatgatcaaaattgcaaaggggctaaattttaggggaccaaaattgtcatttttatacatagggggctaaaattacaactttttg 11283279  T
Q  331 aaaattaagggaggaaaaatgcactttagcc 361  Q
    ||| ||||||| || ||||||||||||||||    
T  11283280 aaagttaagggggggaaaatgcactttagcc 11283310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 185 - 290
Target Start/End: Original strand, 30570181 - 30570286
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||||||||||||| |||||||||| ||||||| |||||||||||   ||||||| ||||  |||||| ||||||| |||| |||||||    
T  30570181 ttaattaaataattacacacgtggcgtgccacgtagacattgactggtcaaaattggccaaaaggaccaaagatgcaaaagggctaaatcttagggggcc 30570280  T
Q  285 aaaatt 290  Q
    ||||||    
T  30570281 aaaatt 30570286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 200 - 359
Target Start/End: Complemental strand, 43661427 - 43661267
Alignment:
Q  200 cacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttc 298  Q
    ||||||||||||||||| || || |||||  ||||||| ||||  ||||| | ||||  |||||||||||||| |||| ||||||||||||| ||||||     
T  43661427 cacacgtggcatgccacatatgcgttgacttggtcaaagttgaccaaaagaaccaaagatgcaaaggggctaaatcttagggggccaaaattatagtttt 43661328  T
Q  299 tatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttag 359  Q
    | ||| || | | ||||||||| || ||||| |||||||||||  ||||| ||||||||||    
T  43661327 tgtacataagggaccaaaattgtaacttttttaaaattaagggtagaaaagtgcactttag 43661267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 1823660 - 1823552
Alignment:
Q  253 aaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgc 352  Q
    |||| |||||| ||||||| |||| |||| || |||||||||||| | |||||||  || ||||||||||||||||||||| ||||||| | |||| | |    
T  1823660 aaaaatgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtac 1823561  T
Q  353 actttagcc 361  Q
    |||||||||    
T  1823560 actttagcc 1823552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 1858105 - 1857997
Alignment:
Q  253 aaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgc 352  Q
    |||| |||||| ||||||| |||| |||| || |||||||||||| | |||||||  || ||||||||||||||||||||| ||||||| | |||| | |    
T  1858105 aaaaatgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtac 1858006  T
Q  353 actttagcc 361  Q
    |||||||||    
T  1858005 actttagcc 1857997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 8388593 - 8388464
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    |||||||||||   ||||||| |||||  ||||||||||||| |||| ||||||||||||| |||||| | ||| |||| ||| |||||||||| |||||    
T  8388593 ggtcaaaattgggcaaaaggaccaaaaacgcaaaggggctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaattgcaacttttt 8388494  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||| |||  || || ||| ||||||||||||    
T  8388493 aaaagtta--ggggggaaagtgcactttagcc 8388464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 297
Target Start/End: Complemental strand, 30569062 - 30568950
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||| ||||||||| |||||||||| ||||||| ||||| |||||   ||||||| ||||  |||||||||||||| |||| ||||  |    
T  30569062 ttaattaaataattatacacgtggcgtgccacgtagacattgactggtcacaattggccaaaaggaccaaagatgcaaaggggctaaatcttaggggatc 30568963  T
Q  285 aaaattgtagttt 297  Q
    |||||| ||||||    
T  30568962 aaaattatagttt 30568950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 363
Target Start/End: Complemental strand, 36249718 - 36249550
Alignment:
Q  195 aattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtag 294  Q
    ||||| ||| ||||||||||||  | |||||||| |||||||||||   |||||||| || ||||||||||| ||||  | |  |||   ||| ||||      
T  36249718 aattatacatgtggcatgccacacatgcattgactggtcaaaattggacaaaaggattaatattgcaaagggcctaaaacataagggattaaatttgtca 36249619  T
Q  295 tttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagccat 363  Q
    ||| ||| | ||||||||||||||||||| ||||| ||| ||||||| |||||| ||||||||||||||    
T  36249618 tttttattcataggaggccaaaattgcaactttttgaaacttaaggggggaaaagtgcactttagccat 36249550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 187 - 361
Target Start/End: Original strand, 30336427 - 30336602
Alignment:
Q  187 aattcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcca 285  Q
    |||||| || ||||| ||||||||||||||  | ||||||||  ||||||||||||  ||||||| ||||  ||||||  |||||| |||| | |||  |    
T  30336427 aattcattatttacatacgtggcatgccacacatgcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagagggtta 30336526  T
Q  286 aaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||| | |||||||||||| ||||||  |||||||| ||| ||| ||| | | || ||||||||||||    
T  30336527 aaattgtagtttttgtacttaggaggctaaaattataagtttttgaaagttaggggggaagaagtgcactttagcc 30336602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 43661747 - 43661924
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||||| || ||||||| ||||||||||||  | || |||||  ||||||||||||| ||||||| ||||  |||||  |||| || |||| ||||||    
T  43661747 ttaattcattatttacacatgtggcatgccacacatgcgttgacttggtcaaaattgatcaaaaggaccaaagatgcaattgggcgaaatcttagggggc 43661846  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||| |||||| | ||| |||  |   |||||||||| ||||| ||| ||||||| |||||| ||||||| ||||    
T  43661847 caaaattttagtttttgtacatagaggattaaaattgcaactttttgaaagttaagggtggaaaagtgcacttcagcc 43661924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 8389659 - 8389787
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||| | ||||||| ||||| || ||||||| ||| |||| |||| | ||||||||||||| | ||| || | | |||||||||||| |||||    
T  8389659 ggtcaaaattgttcaaaaggaccaaaaatgtaaaggggttaaatcttaggggactaaaattgtagtttttgtacataagggaccaaaattgcaacttttt 8389758  T
Q  330 aaaaattaagggaggaaaaatgcacttta 358  Q
     ||| ||||| | |||||| |||||||||    
T  8389759 gaaacttaagaggggaaaagtgcacttta 8389787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 17844450 - 17844395
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattg 240  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||| |||||||||    
T  17844450 ttaattcaataattacacacgtgacgtgccatgtaggcattgaccgatcaaaattg 17844395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 39889340 - 39889410
Alignment:
Q  4 attcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaagaagcaccttgatgagt 77  Q
    |||||||||||||||||||||||   |||||||||||| || ||||||||||||||||||| | ||||| ||||    
T  39889340 attcatgagtttgggtttgaatg---gaagaagaagaatcttgaggagtatgaagaagaagaatcttgaggagt 39889410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 28977990 - 28977933
Alignment:
Q  4 attcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaagaag 64  Q
    |||||||||||||||||||||||||||||||   |||| || |||||||||||||||||||    
T  28977990 attcatgagtttgggtttgaatggaagaaga---agaatcttgaggagtatgaagaagaag 28977933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 359
Target Start/End: Complemental strand, 29043536 - 29043400
Alignment:
Q  223 attgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgca 322  Q
    |||||| |||||||||||   ||||||||||||  | |||||||||||| |||| | |||  ||||||||||||| | ||| |||| || |||||| ||     
T  29043536 attgactggtcaaaattgtctaaaaggatcaaagatacaaaggggctaaatcttagagggaaaaaattgtagtttttgtacatagggggtcaaaatcgcg 29043437  T
Q  323 agtttttaaaaattaagggaggaaaaatgcactttag 359  Q
    | ||||| ||  |||||||||||||| || |||||||    
T  29043436 actttttgaaggttaagggaggaaaagtgaactttag 29043400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 24483200 - 24483142
Alignment:
Q  304 ttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||| |||||||||||||||||||| ||||||| | | |||||| |||||||||||||    
T  24483200 ttagggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcactttagcca 24483142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 284 - 361
Target Start/End: Original strand, 5514294 - 5514370
Alignment:
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||| | || |||| |||| |||||||||||||||| ||||||| ||||  |||| ||||||||||||    
T  5514294 caaaattgtagtttttgtatttagaaggctaaaattgcaagttttttaaaattagggga-taaaagtgcactttagcc 5514370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 28977901 - 28977860
Alignment:
Q  69 ttgatgagtgattttaattggatgatttgattttaaagattt 110  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  28977901 ttgatgaatgattttaattggatgatttgattttaaaaattt 28977860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 32207309 - 32207394
Alignment:
Q  244 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||| ||||  ||||||| |||||| ||||  | ||||||||||||||||| | ||||||||  | |||||||||||||||||    
T  32207309 aaaaggaccaaagatgcaaagaggctaaatcttaagaggccaaaattgtagtttttgtacttagggcgtcaaaattgcaagttttt 32207394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 361
Target Start/End: Complemental strand, 32968586 - 32968456
Alignment:
Q  231 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 330  Q
    |||||||||| | |||||||   ||| ||||||||||||||  | | | ||||||||||||| ||||  |||| | || ||||||||| ||||  ||||     
T  32968586 gtcaaaattgctcaaaaggactgaaaatgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttg 32968487  T
Q  331 aaaattaagggaggaaaaatgcactttagcc 361  Q
    ||| ||| ||| |||||| ||||||||||||    
T  32968486 aaagttagggggggaaaagtgcactttagcc 32968456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 24488664 - 24488748
Alignment:
Q  244 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    |||| ||| ||| |||||| |||||||| ||||  ||||| |||||||| ||||  ||| ||||| ||||||||||||||||||||    
T  24488664 aaaatgatgaaatttgcaatggggctaaatcttacggggc-aaaattgttgttttgatatttagggggccaaaattgcaagttttt 24488748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 3819539 - 3819488
Alignment:
Q  310 ggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||||||||||||  |||| ||| ||||||| ||||||||||||||||||||    
T  3819539 ggccaaaattgcaacattttgaaacttaaggg-ggaaaaatgcactttagcca 3819488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 11288831 - 11288875
Alignment:
Q  193 ataattacacacgtggcatgccacgtaggcattgaccggtcaaaa 237  Q
    ||||||||||||||| | |||||||||  ||||||||||||||||    
T  11288831 ataattacacacgtgacgtgccacgtaaacattgaccggtcaaaa 11288875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 361
Target Start/End: Complemental strand, 11456694 - 11456638
Alignment:
Q  305 taggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||| |||||||||||||| ||||| ||||||| |||  ||||| ||||||||||||    
T  11456694 tagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcactttagcc 11456638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 362
Target Start/End: Complemental strand, 38974878 - 38974794
Alignment:
Q  278 gggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||||||||||||| ||||  |||| | || ||||||||| ||||  |||| ||| ||| ||| |||||| |||||||||||||    
T  38974878 gggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcca 38974794  T

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Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 362
Target Start/End: Complemental strand, 39005976 - 39005892
Alignment:
Q  278 gggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||||||||||||| ||||  |||| | || ||||||||| ||||  |||| ||| ||| ||| |||||| |||||||||||||    
T  39005976 gggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcca 39005892  T

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Target: scaffold0302 (Bit Score: 132; Significance: 3e-68; HSPs: 3)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 182 - 361
Target Start/End: Complemental strand, 17649 - 17470
Alignment:
Q  182 aaattaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggg 281  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||| |||||||||||||    
T  17649 aaattaattcaataattacactcgtggcatgccacgtaggcattgaccggtcaaaattggtaaaaaagatcgaaattgcaaaggggataattcttggggg 17550  T
Q  282 gccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||||| | |||||||| |||||||||||||||||||||||| ||||||| | |||| ||||||||||||    
T  17549 gccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcactttagcc 17470  T

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Target: scaffold0302; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 17832 - 17720
Alignment:
Q  1 aatattcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaagaagcaccttgatgagtgattttaattggatgatttgatt 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||    
T  17832 aatattcatgagtttgggtttgaatggaagaagaagacgaacctggaggagtatgaagaagaagcatcttgatgaatgattttaatcggatgatttgatt 17733  T
Q  101 ttaaagatttcga 113  Q
    |||||||||||||    
T  17732 ttaaagatttcga 17720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 185 - 363
Target Start/End: Original strand, 18701 - 18879
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||  |||| ||| ||| |||||| |||||||| | ||  ||||||    
T  18701 ttaattcaataattacacaagtggtgtgccacgtaggcattgaccggtcaaaattgaccaaaatgattaaagttgcaatggggctaaattttaaggggcc 18800  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagccat 363  Q
    |||||| |||||| | ||| |||| | |||||||||||| ||||||||| ||| | | | |||| ||||||||||||||    
T  18801 aaaattatagtttttgtacctaggggaccaaaattgcaaatttttaaaagttaggagggaaaaagtgcactttagccat 18879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 2e-66; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 36449954 - 36449778
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| |    
T  36449954 ttaattcaataattacacacatggcatgccacgtaggcattgaccggtcaaaattggtcaaaaggatcaaaattgcaaagggcctaattcttgggggggc 36449855  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | |||||||| |||||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  36449854 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 36449778  T

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Target: chr2; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 187 - 358
Target Start/End: Complemental strand, 7898865 - 7898694
Alignment:
Q  187 aattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaa 286  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||| |||||||||| |||||||| |||| |||||||||    
T  7898865 aatttaataattacacacgtggcatgccacgtaagcattgactggtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggccaa 7898766  T
Q  287 aattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||| |||||||  ||||| |||||||||    
T  7898765 aattgtagtttctatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcacttta 7898694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 185 - 358
Target Start/End: Original strand, 36450846 - 36451018
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||   |||||||||||||||||||||| ||||||||||||||||||    
T  36450846 ttaattcaataattacatacgtggtatgccacgtaggcattgaccagtcaaaattggccaaaaggatcaaaattgcaaaggagctaattcttggggggcc 36450945  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
     |||||||||||||| |||||||| | |||||||||||||||||| ||| ||||||| |||||| |||||||||    
T  36450946 gaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcacttta 36451018  T

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Target: chr2; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 38840418 - 38840594
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||| |||||||||| |||||||| |||| ||||||     
T  38840418 ttaattaaataattacacacgtggcacgccgcgtaggcattgaccggtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggct 38840517  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | |||||||| ||| |||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  38840518 aaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 38840594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 38839418 - 38839242
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||||||| |||||| |||||||| |||||||| ||||||||||||  |||| ||| |||||||||| |||||||| |||| |||||||    
T  38839418 ttaattaaataattacacaagtggcacgccacgtaagcattgacgggtcaaaattgaccaaaatgattaaaattgcaatggggctaaatcttagggggcc 38839319  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | || ||||| ||| |||||||||||||||| ||||||||||| | |||||||||||||||||    
T  38839318 aaaattgtagtttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcactttagcc 38839242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 192 - 361
Target Start/End: Original strand, 7899814 - 7899983
Alignment:
Q  192 aataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattg 291  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||  |||| ||| ||| || ||| |||||||| |||| |||||| |||||||    
T  7899814 aataattacacacgtggcgtgccacgtatgcattgaccggtcaaaattgaccaaaaagattaaagttacaatggggctaaatcttagggggctaaaattg 7899913  T
Q  292 tagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||| |||||||| | |||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  7899914 tagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 7899983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 41879137 - 41879313
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| ||| |||||||||| || ||||| | || |||||      
T  41879137 ttaattaaataattacacacgtggcacgccacgtaggcattgactggtcaaaattgatcaaaatgattaaaattgcaatggtgctaaattttagggggtt 41879236  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | |||||||| |||||||||||||||||||| ||||||||||| | |||| || |||||||||    
T  41879237 aaaattgtagtttatgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtactttagcc 41879313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 13570482 - 13570658
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| ||||||||| |||||||| |||||| |||| |||||||| |||||||||  ||||||||||||| ||| |||||| |||||||||||||| ||    
T  13570482 ttaattaaataattacgcacgtggcgtgccacataggaattgaccgctcaaaattggcaaaaaggatcaaagttgtaaagggactaattcttgggggacc 13570581  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||| |||||| | |||||| | | | |||||||||||||||| ||| ||| |||  ||||||||||||||||||    
T  13570582 aaaattatagtttttgtacttaagggactaaaattgcaagtttttgaaagttatgggtagaaaaatgcactttagcc 13570658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 22587879 - 22588054
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| ||||| ||||||||||||||||||| ||| | ||||| |||| ||||||   ||||||| ||||  |||||||||||||| ||||  ||||||    
T  22587879 ttaattaaataaatacacacgtggcatgccacatagacgttgactggtcgaaattggccaaaaggaccaaagatgcaaaggggctaaatcttaaggggcc 22587978  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | ||| |||| |||||||||||||||||||| ||| ||| | | |||||||||||||||||||    
T  22587979 aaaattgtagtttttgtacatagg-ggccaaaattgcaagtttttgaaagttatgaggggaaaaatgcactttagcc 22588054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 185 - 362
Target Start/End: Complemental strand, 41878264 - 41878091
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| ||||||||||||||||     |||||||| ||||||||||||||||||||  |||| ||| |||||||||| |||||||| ||||  ||||||    
T  41878264 ttaattaaataattacacacgtg-----ccacgtag-cattgaccggtcaaaattgaccaaaaagattaaaattgcaatggggctaaatcttaaggggcc 41878171  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgca---agtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||||||||||||| |||||||| |||||||||||||   ||||||| ||| ||||||| || ||| |||||||||||||    
T  41878170 aaaattgtagtttctgtacttagggggccaaaattgcaaatagtttttgaaagttaaggg-gggaaagtgcactttagcca 41878091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 197 - 361
Target Start/End: Complemental strand, 11257786 - 11257622
Alignment:
Q  197 ttacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagt 295  Q
    ||||||||||||||||||||| |||| |||||   |||||||||||| |||||||||||| |||||| |||||||| |||| || |||||||||||||||    
T  11257786 ttacacacgtggcatgccacgcaggcgttgactatgtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggaggccaaaattgtagt 11257687  T
Q  296 ttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    || |||||||||| |   |||||||||||||||| ||| |||  |||| |||| ||||||||||||    
T  11257686 ttttatacttagg-gtttaaaattgcaagtttttgaaagttagaggagtaaaagtgcactttagcc 11257622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 22848368 - 22848191
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||| ||||||| ||||  |||||||||||||| |||| ||| ||    
T  22848368 ttaattaattaattacacacgtggcttgccacgtaggcgttgaataagtcaaaattgatcaaaaggaccaaagctgcaaaggggctaaatcttagggagc 22848269  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||| | || ||||| | |||||||||||||||||| ||| ||| ||| | |||| ||||||||||||    
T  22848268 caaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcc 22848191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 230 - 362
Target Start/End: Complemental strand, 18299504 - 18299372
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||  ||||||||||||  |||||| ||||||| || | |||||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  18299504 ggtcaaaattgaccaaaaggatcaaagatgcaaaagggctaaatcatagggggccaaaattgtagtttttatacttaggtggccaaaattgaaagttttt 18299405  T
Q  330 aaaaattaagggaggaaaaatgcactttagcca 362  Q
     ||| ||| ||| |||||| |||||||||||||    
T  18299404 gaaagttacgggtggaaaagtgcactttagcca 18299372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 185 - 297
Target Start/End: Complemental strand, 22587676 - 22587564
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||||||||||||||||||| |||||||||||| |||||||||||   ||||||| ||||  ||||||| |||||| |||| |||||||    
T  22587676 ttaattaaataattacacacgtggcatgccatgtaggcattgactggtcaaaattggccaaaaggaccaaagatgcaaagaggctaaatcttagggggcc 22587577  T
Q  285 aaaattgtagttt 297  Q
    |||||||||||||    
T  22587576 aaaattgtagttt 22587564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 231 - 361
Target Start/End: Original strand, 11938760 - 11938889
Alignment:
Q  231 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 330  Q
    ||||||||||  ||||| ||||||||||||||| | |||||||||| ||||| ||||||| || ||| | |||||||||| ||||||||||||||||||     
T  11938760 gtcaaaattggcaaaaatgatcaaaattgcaaaagagctaattcttaggggggcaaaattatatttt-tgtacttaggagaccaaaattgcaagtttttg 11938858  T
Q  331 aaaattaagggaggaaaaatgcactttagcc 361  Q
    ||| ||| ||| |||||| ||||||||||||    
T  11938859 aaagttaggggtggaaaagtgcactttagcc 11938889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 11258735 - 11258912
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||||| || || ||| |||||||||||| | | || |||||  ||||||||||||  ||||||||||||  ||||| |||||||| |||| |||| |    
T  11258735 ttaattcattatttgcacgcgtggcatgccatgcaagcgttgactaggtcaaaattgaccaaaaggatcaaatctgcaatggggctaaatcttaggggac 11258834  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||||||||||||| | |||||||| |||||||||||||||||||| ||| |||  |  || ||||||||||||||||    
T  11258835 taaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagagaggggaaaatgcactttagcc 11258912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 244 - 361
Target Start/End: Original strand, 23869519 - 23869635
Alignment:
Q  244 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag 343  Q
    ||||||||||||  |||||||||||||| |||| ||| || ||||||||||||| | || ||||| |||||||||||||||||||| ||| ||||||| |    
T  23869519 aaaaggatcaaagatgcaaaggggctaaatcttagggagctaaaattgtagtttttgtatttagggggccaaaattgcaagttttt-aaagttaagggtg 23869617  T
Q  344 gaaaaatgcactttagcc 361  Q
    ||||| ||||||||||||    
T  23869618 gaaaagtgcactttagcc 23869635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 358
Target Start/End: Complemental strand, 8534758 - 8534586
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||||||||||||||||||| || |||||  ||||| ||||||  |||||||||||   ||||||  |  ||||||||| |||||||||||||||  |    
T  8534758 ttaattcaataattacacacgtagcctgccatataggcgttgaccaagtcaaaattgacctaaaggactactattgcaaagaggctaattcttgggga-c 8534660  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    |||||||||||||||||||||||   |  |||||||| |||||||| ||||||||||| ||||||  ||||||||    
T  8534659 caaaattgtagtttctatacttaaaggatcaaaattgtaagtttttgaaaattaaggg-ggaaaagagcacttta 8534586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 358
Target Start/End: Complemental strand, 26544325 - 26544152
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||||| || ||||||||| |||||||||| || || |||||  ||||||||||||| ||||||| ||||  |||||||| ||||| |||| || |||    
T  26544325 ttaattcattatttacacacgcggcatgccacatatgcgttgacttggtcaaaattgatcaaaaggaccaaatatgcaaaggtgctaaatcttaggaggc 26544226  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
     |||| |||||||| | |||||||||  ||||||||| || ||||||||||||| |||  ||||| |||||||||    
T  26544225 taaaactgtagtttttgtacttagga-accaaaattgtaaatttttaaaaattaggggtagaaaagtgcacttta 26544152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 16446330 - 16446154
Alignment:
Q  185 ttaattcaataa-ttacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||||||||| ||||||||||||| |||||  |||||||||||  || ||||||||   ||||||  |  |||||||| ||| ||||||||||||       
T  16446330 ttaattcaataaattacacacgtggc-tgccatataggcattgacgagttaaaattgaactaaaggactactattgcaaatgggttaattcttggggtat 16446232  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||| | || ||| ||||  |||||||||||||||| ||| |||||||  ||||||||||||||||||    
T  16446231 caaaattgtagtttttgtatttatgaggttaaaattgcaagtttttgaaagttaagggtagaaaaatgcactttagcc 16446154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 194 - 361
Target Start/End: Complemental strand, 18797415 - 18797246
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    ||||||||||||||||||||||  || || ||||||  ||||||||||   ||||||| ||||  |||||||||||||| | || ||||| |||||||||    
T  18797415 taattacacacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttagggggtcaaaattgt 18797316  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaatta-agggaggaaaaatgcactttagcc 361  Q
    |||||  ||||||| | || ||||||||||||||||| ||| |||  ||| |||||| ||||||||||||    
T  18797315 agttttaatacttaaggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgcactttagcc 18797246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 244 - 361
Target Start/End: Complemental strand, 18904484 - 18904367
Alignment:
Q  244 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag 343  Q
    ||||||| ||||  || |||||||||||||||| |||  ||||||||||||||| | |||||| | ||||||||||||| |||||| ||| ||||||| |    
T  18904484 aaaaggaccaaagatgtaaaggggctaattcttagggaaccaaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggg 18904385  T
Q  344 gaaaaatgcactttagcc 361  Q
    ||||| ||||||||||||    
T  18904384 gaaaagtgcactttagcc 18904367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 802516 - 802691
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| ||||||||||||| || |||||||| |||| |||||| | ||||||||||   |||||| ||||  ||||||||||  || |||| | ||| |    
T  802516 ttaatttaataattacacacatgacatgccacctaggtattgactgctcaaaattgacctaaaggaccaaatatgcaaaggggtaaaatcttagagggtc 802615  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | |||  ||| |||||||||||||||||||| ||| || |||| |||||| | ||||||||||    
T  802616 aaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaactt-aggggggaaaagtacactttagcc 802691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 185 - 329
Target Start/End: Original strand, 810706 - 810850
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| ||||||||||||| || |||||||| |||| |||||| | |||||||||||  |||||| ||||  ||||||||||  || |||| | ||| |    
T  810706 ttaatttaataattacacacatgacatgccacctaggtattgactgctcaaaattgatctaaaggaccaaatatgcaaaggggtaaaatcttagagggtc 810805  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||| | |||  ||| ||||||||||||||||||||    
T  810806 aaaattgtagtttttgtacacagggggccaaaattgcaagttttt 810850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 18905912 - 18906088
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||  |||||||||||| ||||    |||||||||||| |||| || ||||  |||||| | ||||| |||| |||| |    
T  18905912 ttaattaattaattacacacgtggtctgccacgtaggcgttgaataagtcaaaattgatcaaaaagaccaaagatgcaaatgagctaaatcttagggg-c 18906010  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||||||||||||| | |||||||| ||| |||||||||||||||| ||| |||   | |||||| ||||||||||||    
T  18906011 taaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttagaaggggaaaagtgcactttagcc 18906088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 256 - 358
Target Start/End: Original strand, 8535652 - 8535752
Alignment:
Q  256 attgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcact 355  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| ||||||   |  ||||||| ||||||||||||| |||  ||||||||| || |||    
T  8535652 attgcaaaggggctaattcttagggggtcaaaattgtagtttctctacttaaaggatcaaaattacaagtttttaaaagtta--ggaggaaaagtgtact 8535749  T
Q  356 tta 358  Q
    |||    
T  8535750 tta 8535752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 185 - 329
Target Start/End: Complemental strand, 13568148 - 13568004
Alignment:
Q  185 ttaattcaat-aattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttgggggg 282  Q
    |||||||||| ||||||||||||||| |||||  ||||| ||||||| |||||||||||   ||| ||  |  |||||||||||||||||| |||||       
T  13568148 ttaattcaatgaattacacacgtggcctgccatataggcgttgaccgagtcaaaattgacctaaatgactactattgcaaaggggctaatttttgggat- 13568050  T
Q  283 ccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
     |||||||||||||| | || ||||| ||||||||||||||||||||    
T  13568049 -caaaattgtagtttttgtatttagggggccaaaattgcaagttttt 13568004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 230 - 344
Target Start/End: Complemental strand, 24475355 - 24475241
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||  ||||||| ||||  |||||| | ||||| |  | |||||||||||||||||||| |||||||||| ||| |||||| |||||||||    
T  24475355 ggtcaaaattgaccaaaaggaccaaagatgcaaatgagctaaattatagggggccaaaattgtagtttttatacttagggggcaaaaattacaagttttt 24475256  T
Q  330 aaaaattaagggagg 344  Q
     ||| ||| ||||||    
T  24475255 gaaagttaggggagg 24475241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 185 - 358
Target Start/End: Complemental strand, 28618098 - 28617926
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||  |||||||||||||||||    |||||||| ||  ||||  | ||||  |||||||||||||| |||| ||||||    
T  28618098 ttaattaattaattacacacgtggtctgccacgtaggcattgaattagtcaaaatagaccaaaataaccaaagatgcaaaggggctaaatcttagggggc 28617999  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
     ||||||| ||||| | ||||| || ||||||||||||||| |||| ||| || |||||| ||||||| ||||||    
T  28617998 -aaaattgaagtttttgtacttggggggccaaaattgcaagattttgaaagtt-agggagaaaaaatgtacttta 28617926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 361
Target Start/End: Complemental strand, 18869001 - 18868924
Alignment:
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||| | || |||||||||||||||||||||||||| ||| ||| ||| |||||| | ||||||||||    
T  18869001 caaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcc 18868924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 194 - 360
Target Start/End: Complemental strand, 13030457 - 13030293
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    |||||||||| ||||| |||||||||||| ||||    |||||||||||  |||| || ||||  |||||| | ||||| |||| |||||| ||||||||    
T  13030457 taattacacatgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaatgaccaaagatgcaaaagagctaaatcttagggggcaaaaattgt 13030358  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagc 360  Q
    | ||| | |||||||| |||||||||| ||||||||| ||| |||  || |||||| |||||||||||    
T  13030357 aatttttgtacttagg-ggccaaaattacaagtttttgaaagtta--gggggaaaagtgcactttagc 13030293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 361
Target Start/End: Complemental strand, 32739706 - 32739623
Alignment:
Q  278 gggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||||||||| | ||| || | |||||||||||||||||||| ||| ||| ||||  |||||| ||||||||||    
T  32739706 gggggccaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagttaggggaaaaaaaatacactttagcc 32739623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 329
Target Start/End: Original strand, 26545445 - 26545590
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||||| || |||||||||||||||||||| || || ||||   ||||||||||||| |||| || ||||  |||||||||||||| |||| | |||     
T  26545445 ttaattcattatttacacacgtggcatgccacatatgcgttgatttggtcaaaattgatcaaaatgaccaaagatgcaaaggggctaaatcttagagggt 26545544  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||| || ||| | || ||| | || ||||||||||| |||||    
T  26545545 caaaattataatttttgtatttaaggggtcaaaattgcaaattttt 26545590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 27553701 - 27553827
Alignment:
Q  196 attacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtag 294  Q
    |||||| |||||||||||||| ||||| ||||| |||||||||||||  |||||| || | |||||||||||||||| |||| |||||| ||| ||  |     
T  27553701 attacatacgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaagg-tcgatattgcaaaggggctaaatcttagggggcaaaattttcat 27553799  T
Q  295 tttctatacttaggaggccaaaattgcaa 323  Q
    ||| | || ||||||||||||||| ||||    
T  27553800 ttttttta-ttaggaggccaaaatcgcaa 27553827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 297
Target Start/End: Complemental strand, 32739827 - 32739715
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||||   ||| ||| ||||  || |||  | |||| ||||  ||||||    
T  32739827 ttaattcaataattacacacgtggtgtgcgatgtaggcgttgaccggtcaaaattggccaaatggaccaaagatggaaaatgactaaatcttaaggggcc 32739728  T
Q  285 aaaattgtagttt 297  Q
    |||||||||||||    
T  32739727 aaaattgtagttt 32739715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 361
Target Start/End: Original strand, 1034475 - 1034570
Alignment:
Q  266 ggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||| |||| ||||| | ||||||| ||||   ||| |||| ||||||||||||| |||||| ||| ||||||| |||||| ||||||||||||    
T  1034475 ggctaaatcttaggggggctaaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagcc 1034570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 321
Target Start/End: Original strand, 18869086 - 18869224
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaag-gggctaattcttgggggg 282  Q
    |||||| | |||||||||||||||| |||||| ||||| ||||    |||||||||||| |||| || ||||  ||||||  ||||||| |||| ||||     
T  18869086 ttaattaattaattacacacgtggcctgccacataggcgttgaataagtcaaaattgatcaaaaagaccaaagatgcaaaatgggctaaatcttagggga 18869185  T
Q  283 ccaaaattgtagtttctatacttaggaggccaaaattgc 321  Q
      ||||||||||||| | ||||||| |||||||||||||    
T  18869186 taaaaattgtagtttttgtacttagaaggccaaaattgc 18869224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 8972629 - 8972574
Alignment:
Q  4 attcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaaga 62  Q
    ||||||||||||||||||||||| |||||||   ||||| |||||||||||| ||||||    
T  8972629 attcatgagtttgggtttgaatgaaagaaga---agaacatggaggagtatgtagaaga 8972574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 20440127 - 20440180
Alignment:
Q  6 tcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaaga 62  Q
    |||||| ||||||||||||||   ||||||||||||| |||||||||||| ||||||    
T  20440127 tcatgaatttgggtttgaatg---gaagaagaagaacatggaggagtatgtagaaga 20440180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 20445732 - 20445785
Alignment:
Q  6 tcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaaga 62  Q
    |||||| ||||||||||||||   ||||||||||||| |||||||||||| ||||||    
T  20445732 tcatgaatttgggtttgaatg---gaagaagaagaacatggaggagtatgtagaaga 20445785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 24476863 - 24476917
Alignment:
Q  279 ggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaa 333  Q
    |||| |||||||||||||| | |||||||| | |||||||| |||||||||||||    
T  24476863 ggggtcaaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaa 24476917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 35780160 - 35780107
Alignment:
Q  6 tcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaaga 62  Q
    |||||| ||||||||||||||||||||||   ||||| |||||||||||| ||||||    
T  35780160 tcatgaatttgggtttgaatggaagaaga---agaacatggaggagtatgtagaaga 35780107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 18300743 - 18300791
Alignment:
Q  279 ggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttt 327  Q
    |||| |||||||||||||| | |||||||| || |||||||||||||||    
T  18300743 ggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttt 18300791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 361
Target Start/End: Original strand, 26829333 - 26829389
Alignment:
Q  305 taggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||| ||||||||| ||||  |||||||| |||||||| ||||| ||||||||||||    
T  26829333 tagggggccaaaatcgcaacattttaaaacttaagggatgaaaagtgcactttagcc 26829389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 1e-61; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 54540715 - 54540891
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||| |||||||    
T  54540715 ttaattcattaattacacacgtggcatgccacgtaggcattgaccggtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggcc 54540814  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | |||||| | || ||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  54540815 aaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 54540891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 187 - 358
Target Start/End: Original strand, 7268754 - 7268924
Alignment:
Q  187 aattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaa 286  Q
    |||| |||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||| ||| |||| |||| || ||||||    
T  7268754 aatttaataattacacacgtggcgtgccacgtaagcattgaccggtcaaaattgatcaaaaggattaaaattgcaatgggactaaatcttaggaggccaa 7268853  T
Q  287 aattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| || |||| |||||| |||||||||    
T  7268854 aattgtagtttctatacttaggaggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 7268924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 22776737 - 22776913
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| ||||  ||||||||||||||||||| |||||||    
T  22776737 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgggaaaatggaccaaatatgcaaaggggctaattcttagggggcc 22776836  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | ||| |||| |||||||||||||| ||| | ||| ||| ||| |||||| ||||||||||||    
T  22776837 aaaattgtagtttttgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcactttagcc 22776913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 187 - 358
Target Start/End: Complemental strand, 7267817 - 7267647
Alignment:
Q  187 aattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaa 286  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||||||||||  |||||||| ||| |||||| | |||||| |||| |||||||||    
T  7267817 aatttaataattacacacgtggcgtgccatgtatgcattgaccggtcaaaattgaccaaaaggattaaagttgcaatgaggctaaatcttagggggccaa 7267718  T
Q  287 aattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    ||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||| |||||| |||||||||    
T  7267717 aattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcacttta 7267647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 55191920 - 55192095
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||||||||||||| ||||  ||||| |||| |||| |||| |||||||||| ||||| ||||||||||||||||||| ||||||||| ||||||    
T  55191920 ttaattcaataattacacatgtggtgtgccatgtagacattaaccgatcaaaattgacaaaaatgatcaaaattgcaaaggggttaattcttgaggggcc 55192019  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | |||||||  |||||||||||||||||||| ||| ||||||| || ||||| ||||||||||    
T  55192020 aaaattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagttaaggg-gggaaaatacactttagcc 55192095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 19985025 - 19984849
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||  ||||||| ||||  |||||||||| ||| ||||   ||| |    
T  19985025 ttaatttaataattacacatgtggcatgccacgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtc 19984926  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | ||| |||| |||||||||||||||||||| ||| ||| ||| |||||| ||||||||||||    
T  19984925 aaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagcc 19984849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 54539931 - 54539755
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||||| |||||||||||||||||||||||||| || |||||| ||||||||||  ||||||||||||| ||||||| | ||||| |||| ||||  |    
T  54539931 ttaattcattaattacacacgtggcatgccacgtatgctttgaccagtcaaaattggcaaaaaggatcaaagttgcaaatgagctaaatcttaggggatc 54539832  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | || ||||| ||  |||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  54539831 aaaattgtagtttttgtatttagggggttaaaattgcaagtttttgaaagttaagggtggaaaagtgcactttagcc 54539755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 19985995 - 19986173
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||   ||| || ||||  |||||||||| ||| |||| | ||| |    
T  19985995 ttaatttaataattacacacgtggcatgccacgtaggcattgactggtcaaaattgaccgaaatgaccaaagatgcaaaggggttaaatcttagagggtc 19986094  T
Q  285 aaaattgtagtttctatacttagga--ggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| ||||| |||||  |||||||||||||||||||| ||| ||||| | |||||| ||||||||||||    
T  19986095 aaaattgtagtttttatacataggaggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgcactttagcc 19986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 185 - 291
Target Start/End: Complemental strand, 22775922 - 22775816
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  |||||||| ||||  |||||||||||||||||||||||||||    
T  22775922 ttaattcaataattacacacgtaacatgccacgtaggcattgaccggtcaaaattgggaaaaaggaccaaatctgcaaaggggctaattcttggggggcc 22775823  T
Q  285 aaaattg 291  Q
    |||||||    
T  22775822 aaaattg 22775816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 197 - 360
Target Start/End: Complemental strand, 8456642 - 8456479
Alignment:
Q  197 ttacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagt 295  Q
    ||||||||||||||||||||| |||| |||||  ||||||||||||  |||||||||||| |||||| | |||||| |||| ||||||||||||||||||    
T  8456642 ttacacacgtggcatgccacgcaggcgttgactaggtcaaaattgactaaaaggatcaaatttgcaatgaggctaaatcttagggggccaaaattgtagt 8456543  T
Q  296 ttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagc 360  Q
    || | || ||||| | |||||||||||||||||| |||||| |||| | |||| |||||||||||    
T  8456542 ttttgtatttaggggaccaaaattgcaagtttttgaaaatt-agggggaaaaagtgcactttagc 8456479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 185 - 337
Target Start/End: Original strand, 34940112 - 34940264
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| | ||||||||||| ||||| || ||||  | |||| ||||||||| || | || ||    
T  34940112 ttaattcaataattacacatgtggcatgctacgtaggcattgatcagtcaaaattgagaaaaaagaccaaatatacaaatgggctaattattagaggacc 34940211  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaatta 337  Q
    ||||||||| ||| ||||| || |||   ||||||||||||||||||||||||    
T  34940212 aaaattgtaatttttatacataagagattaaaattgcaagtttttaaaaatta 34940264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 194 - 361
Target Start/End: Original strand, 51038723 - 51038891
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    ||||||||||||||||||||||  |  || ||||| |||||||||||| ||||||||| ||  ||||||||||||  |||||||  ||| ||||||||||    
T  51038723 taattacacacgtggcatgccaaatcagcgttgactcggtcaaaattgctaaaaaggaccactattgcaaaggggacaattcttaagggaccaaaattgt 51038822  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||| | | | |||| || ||||||||||| ||||||||| ||||||| |||||| ||||||||||||    
T  51038823 agtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagcc 51038891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 195 - 361
Target Start/End: Complemental strand, 7758569 - 7758402
Alignment:
Q  195 aattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgta 293  Q
    ||||| |||||||||||||||| || || |||||  ||||||||||||  ||||||| ||||  | |||||||| ||| |||| |||||| |||||||||    
T  7758569 aattatacacgtggcatgccacttaagcgttgactaggtcaaaattgaccaaaaggaccaaagatacaaaggggttaaatcttagggggcaaaaattgta 7758470  T
Q  294 gtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||| | |||||||| || ||||||||||||||||| ||| ||||||| | |||| ||||||||||||    
T  7758469 gtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcc 7758402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 29931403 - 29931226
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||||| || |||||||||||| ||||||   |||| ||||| | |||||||||||  |||||||  |  |||||||||||| ||| |||| ||||||    
T  29931403 ttaattcattatttacacacgtggaatgccatacaggcgttgactgtgtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggc 29931304  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||| | || ||||| ||| |||||||||||||||| ||| ||| ||| |||||| ||||||||||||    
T  29931303 caaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 29931226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 29980557 - 29980380
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||||| || |||||||||||| ||||||   |||| ||||| | |||||||||||  |||||||  |  |||||||||||| ||| |||| ||||||    
T  29980557 ttaattcattatttacacacgtggaatgccatacaggcgttgactgtgtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggc 29980458  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||| | || ||||| ||| |||||||||||||||| ||| ||| ||| |||||| ||||||||||||    
T  29980457 caaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 29980380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 185 - 362
Target Start/End: Complemental strand, 49216423 - 49216246
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||||||||||| |||||||||||| |||||| ||||||||||||   |||| |||||||  |||||| | ||||| ||||  |||| |    
T  49216423 ttaattaaataattacacacgtgacatgccacgtagacattgatcggtcaaaattggccaaaatgatcaaagatgcaaatgagctaaatcttaaggggac 49216324  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    | ||||||||||| | ||| |||| || ||||||||||| ||||| ||| ||| | | |||||| |||||||||||||    
T  49216323 ataattgtagtttttgtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcactttagcca 49216246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 53614995 - 53614819
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| |||||||||||||||| | |||||  ||||| |||| || ||||||||||| | ||||||     |||||||| ||||||||||||||||| |    
T  53614995 ttaatttaataattacacacgtgacctgccatataggcgttgatcgagtcaaaattgacataaaggactgctattgcaaatgggctaattcttggggg-c 53614897  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||| ||||  |||  | | ||||||| |||||||| ||| |||||||||||||||||||||||||||    
T  53614896 caaaattgtagtttttatatatagaggactaaaattgtaagtttttgaaagttaagggaggaaaaatgcactttagcc 53614819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 185 - 297
Target Start/End: Complemental strand, 10457716 - 10457604
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||  |||||||| ||||  | ||||  | ||||||| | |||||||    
T  10457716 ttaattcaataattacacacgtggaatgccacgtaggcattgaccagtcaaaattgggaaaaaggaccaaatatacaaatagactaattcctagggggcc 10457617  T
Q  285 aaaattgtagttt 297  Q
    |||||||||||||    
T  10457616 aaaattgtagttt 10457604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 232 - 363
Target Start/End: Complemental strand, 46720070 - 46719939
Alignment:
Q  232 tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaa 331  Q
    ||||||||||  ||||||| ||||  |||||| ||||||| |||| | || | ||||||||||||| ||||| |||| ||||||||| |||| |||||||    
T  46720070 tcaaaattgaccaaaaggaccaaatatgcaaatgggctaaatcttagaggactaaaattgtagtttttatacatagggggccaaaatcgcaactttttaa 46719971  T
Q  332 aaattaagggaggaaaaatgcactttagccat 363  Q
    || ||||||| |||||||||||||||||||||    
T  46719970 aagttaaggggggaaaaatgcactttagccat 46719939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 185 - 362
Target Start/End: Complemental strand, 47614362 - 47614184
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    ||||||||| |  ||||| | ||||  ||||||| |||||| |||| ||||||    
T  47614362 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattaaccaaaagcaccaaagatgcaaagaggctaaatcttagggggc 47614263  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||||||| ||||  ||||||||| |||||||||||||||||||| ||| |||  || | |||| |||||||||||||    
T  47614262 caaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcactttagcca 47614184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 189 - 358
Target Start/End: Complemental strand, 49398298 - 49398130
Alignment:
Q  189 ttcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaa 288  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| |||| |||||||||||||| ||||||| | ||||| ||||  | ||||||||    
T  49398298 ttcagtaattacacacatggcgtgccacgtaggcattgaccggtcaacattggtaaaaaggatcaaagttgcaaatgagctaaatcttaagaggccaaaa 49398199  T
Q  289 ttgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    ||||| ||| | | | ||| |  |||||||   || ||||||||| ||||||| |||||| |||||||||    
T  49398198 ttgtaatttttgttcatagaacaccaaaataataattttttaaaacttaaggg-ggaaaagtgcacttta 49398130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 194 - 362
Target Start/End: Complemental strand, 51037703 - 51037535
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    ||||||||||||||||||||||  |  |  ||||| |||||||||||| ||||||||| ||  | ||||||||||||||||||| |||||| ||||||||    
T  51037703 taattacacacgtggcatgccaaatcagtgttgactcggtcaaaattgttaaaaaggaccactactgcaaaggggctaattcttagggggctaaaattgt 51037604  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||| | | | |||  || ||||||||||| ||||| ||| |||||||| ||||| |||||||||||||    
T  51037603 agtttttgttcatagagggtcaaaattgcaactttttgaaagttaaggga-gaaaagtgcactttagcca 51037535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 230 - 362
Target Start/End: Complemental strand, 51470103 - 51469971
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||| ||||||| |||| |||||| |||||||| |||| |||||   ||||||| ||||   |||||||| ||||||||||||||||||||    
T  51470103 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggccaaaattgcaagttttt 51470004  T
Q  330 aaaaattaagggaggaaaaatgcactttagcca 362  Q
     ||||||| ||  |||||| |||||||||||||    
T  51470003 gaaaattagggagggaaaagtgcactttagcca 51469971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 12700350 - 12700175
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||  ||||||| ||||  ||||| | |||||| || | |||||     
T  12700350 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaatgtggctaaatcatagggggt 12700251  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||| | |||||||| |||||||||||||||||||| ||| |||  || || ||| ||||||||||||    
T  12700250 caaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta--ggggggaaagtgcactttagcc 12700175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 185 - 338
Target Start/End: Complemental strand, 4271616 - 4271463
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||||||| ||||| || ||  ||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||||  |  ||     
T  4271616 ttaatttaataattacacatgtggcgtgtcatatagacattgaccggtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaagatgct 4271517  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaa 338  Q
    ||||||||||||| |||| ||| |||  ||||||| ||| ||||| ||| ||||    
T  4271516 aaaattgtagtttttatatttaagagatcaaaattacaaatttttgaaagttaa 4271463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 187 - 328
Target Start/End: Complemental strand, 55191684 - 55191544
Alignment:
Q  187 aattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaa 286  Q
    |||| |||||||||||||||||| | || | ||||| ||||| | |||||| ||||||||||||||||||||||||||||||||| ||||| | ||  ||    
T  55191684 aatttaataattacacacgtggcgtaccgcataggctttgactgatcaaaagtgataaaaaggatcaaaattgcaaaggggctaaatcttgagagg-gaa 55191586  T
Q  287 aattgtagtttctatacttaggaggccaaaattgcaagtttt 328  Q
    |||| |||||| | || |||||  | ||||||||||||||||    
T  55191585 aattatagtttttgtatttagggtgtcaaaattgcaagtttt 55191544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 185 - 329
Target Start/End: Complemental strand, 31645149 - 31645005
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||| ||||||||| |||| ||| ||| | ||||||||||||||||| | ||||||| ||||  |||||| ||||||| |||| || ||      
T  31645149 ttaattaaataataacacacgtgacatgacacatagacgttgaccggtcaaaattggtcaaaaggaccaaagatgcaaatgggctaaatcttaggaggtt 31645050  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||| |  ||||||| ||||||||||| ||||||||    
T  31645049 aaaattgtagtttttgcacttagggggccaaaattgtaagttttt 31645005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 362
Target Start/End: Original strand, 52840573 - 52840706
Alignment:
Q  229 cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttt 328  Q
    ||||||||||| |  |||| ||| ||| |||||| |||||||| |||| ||||| ||||||||| ||||  ||| |||||  ||||||||||||||||||    
T  52840573 cggtcaaaattaaccaaaatgataaaatttgcaatggggctaaatcttagggggacaaaattgttgttttgataattagggagccaaaattgcaagtttt 52840672  T
Q  329 taaaaattaagggaggaaaaatgcactttagcca 362  Q
    | ||| ||| ||||||||||  ||||||||||||    
T  52840673 tgaaagttaggggaggaaaagggcactttagcca 52840706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 47610550 - 47610678
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| ||||||||||||||||||||    
T  47610550 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagttttt 47610649  T
Q  330 aaaaattaagggaggaaaaatgcacttta 358  Q
     ||| |||  || |||||| |||||||||    
T  47610650 gaaagttagagggggaaaagtgcacttta 47610678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 357
Target Start/End: Complemental strand, 24516562 - 24516464
Alignment:
Q  259 gcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttt 357  Q
    ||||||| ||||| ||||  ||||||||||||||||||| ||||||||||  ||||||||||||||||||| ||| ||| ||| | |||| ||||||||    
T  24516562 gcaaaggagctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcacttt 24516464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 358
Target Start/End: Complemental strand, 39843220 - 39843054
Alignment:
Q  192 aataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattg 291  Q
    ||||||||||| |||||||||||| | | || |||||| |||||||| | | |||| ||| |||||||||||||| ||||||  | | |||||||| |||    
T  39843220 aataattacacgcgtggcatgccatgcaagcgttgacctgtcaaaatcggtcaaaatgatgaaaattgcaaagggactaatttatagagggccaaatttg 39843121  T
Q  292 tagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    |  ||||| ||| |||| | | |||||||||| ||||| ||| ||||||| | |||| |||||||||    
T  39843120 tcatttctttacataggggactaaaattgcaactttttcaaacttaagggggaaaaagtgcacttta 39843054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 47615510 - 47615608
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattg 291  Q
    |||||||||||||||| |||||||||||||||||    |||||||||||  ||||||| ||||  |||||||||||||| |||| ||||||||||||||    
T  47615510 taattacacacgtggcctgccacgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattg 47615608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 29932695 - 29932799
Alignment:
Q  256 attgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcact 355  Q
    ||||||||||| |||| ||||  |||| |||||||||||||| | |||||||| |||||||||||||||||||| ||| |||  || |||||| ||||||    
T  29932695 attgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttagg-ggccaaaattgcaagtttttgaaagttagagggggaaaagtgcact 29932793  T
Q  356 ttagcc 361  Q
    ||||||    
T  29932794 ttagcc 29932799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 29981849 - 29981953
Alignment:
Q  256 attgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcact 355  Q
    ||||||||||| |||| ||||  |||| |||||||||||||| | |||||||| |||||||||||||||||||| ||| |||  || |||||| ||||||    
T  29981849 attgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttagg-ggccaaaattgcaagtttttgaaagttagagggggaaaagtgcact 29981947  T
Q  356 ttagcc 361  Q
    ||||||    
T  29981948 ttagcc 29981953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 198 - 361
Target Start/End: Complemental strand, 47609861 - 47609697
Alignment:
Q  198 tacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtt 296  Q
    |||||| |||||||||||  | ||| |||||  ||||||||||| | ||||||| |||| |||||| |||||||| |||| |||||   ||||||| |||    
T  47609861 tacacatgtggcatgccaaattggcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggtt 47609762  T
Q  297 tctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |   |||||||| || ||||||||||||||||| ||| ||| ||| |||||| |||| |||||||    
T  47609761 ttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcattttagcc 47609697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 49220477 - 49220533
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattga 241  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  49220477 ttaattaaataattacacacgtggcaagccacgtagacattgaccggtcaaaattga 49220533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 52839213 - 52839037
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||| ||||| ||||||||| | |||| ||||| ||||||||||||||||||  |||||||| ||| |||||| |||||||| | || | |||      
T  52839213 ttaattcaacaattatacacgtggcgtaccacataggctttgaccggtcaaaattgaccaaaaggatgaaatttgcaatggggctaaattttagaggggt 52839114  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||| ||||   |||||||  || ||||||| ||| |||||  || |||  || |||||| ||||||||||||    
T  52839113 aaaattgttgttttggtacttagagggtcaaaattacaaatttttggaagttagagggggaaaattgcactttagcc 52839037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 12703424 - 12703600
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||  |||||||||||| ||||    |||||||||  | |||| || ||||  ||||| |||||||| || | ||||||    
T  12703424 ttaattaattaattacacacgtggtctgccacgtaggcgttgaataagtcaaaattattcaaaatgaccaaagatgcaatggggctaaatcatagggggc 12703523  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaatta-agggaggaaaaatgcactttagcc 361  Q
    |||||||||||||| | |||||||| |||||||||| ||| ||||| ||| ||| |||||  |||| ||||||||||||    
T  12703524 caaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagttagaggga--aaaagtgcactttagcc 12703600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 200 - 358
Target Start/End: Original strand, 23770346 - 23770505
Alignment:
Q  200 cacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttc 298  Q
    ||||||||||||||||| || || |||||  ||||||| ||||  |||||||  |||  |||||||||| ||| |||| |||||| |||||||||||||     
T  23770346 cacacgtggcatgccacatatgcgttgacttggtcaaagttgaccaaaaggactaaagatgcaaaggggttaaatcttagggggctaaaattgtagtttt 23770445  T
Q  299 tatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    | ||| || | | ||||||||| || ||||| |||||||||||  ||||| |||||||||    
T  23770446 tgtacataagggaccaaaattgtaacttttttaaaattaaggggagaaaattgcacttta 23770505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 361
Target Start/End: Complemental strand, 8876071 - 8875906
Alignment:
Q  197 ttacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagt 295  Q
    ||||||| ||||| |||||||||||| ||||    |||||||||||  ||||||| ||||  ||||||  |||||| |||| ||||||||||||||||||    
T  8876071 ttacacatgtggcctgccacgtaggcgttgaataagtcaaaattgactaaaaggaccaaatatgcaaattggctaaatcttagggggccaaaattgtagt 8875972  T
Q  296 ttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    || | ||| || | ||| |||||||||  |||||  || |||||||  ||||| ||||||||||||    
T  8875971 ttttgtacataaggggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcactttagcc 8875906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 11670550 - 11670406
Alignment:
Q  196 attacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtag 294  Q
    |||||||||||||| ||||||||| || ||||    |||||||||||| |||||||  |||| ||||| ||| |||| || |  ||| |||||||| |||    
T  11670550 attacacacgtggcctgccacgtaagcgttgaataagtcaaaattgatcaaaaggacaaaaaatgcaatgggactaaatcataagggaccaaaattatag 11670451  T
Q  295 tttctatacttaggaggccaaaattgcaagtttttaaaaattaag 339  Q
    ||| |||||||||| | | |||||||||| ||||| |||||||||    
T  11670450 tttttatacttaggggactaaaattgcaaatttttgaaaattaag 11670406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 425 - 473
Target Start/End: Original strand, 19543733 - 19543781
Alignment:
Q  425 tgggatttaaaacctctttggaaacctcgacaatagaggaacccaaacc 473  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||    
T  19543733 tgggatttaaaacctctttggaaacctcgacattggaggaacccaaacc 19543781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 329
Target Start/End: Complemental strand, 534594 - 534531
Alignment:
Q  266 ggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    |||||| |||| |||||||||||||||||||| | ||| ||||||| |||||||||||||||||    
T  534594 ggctaaatcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagttttt 534531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 358
Target Start/End: Original strand, 34019069 - 34019241
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccgg-tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| || ||||||||| ||||     ||||||||||  ||||||| ||||  |||||| | ||||| | || |||| |    
T  34019069 ttaattaattaattacacacgtggcctgtcacgtaggcgttgaataaatcaaaattgaccaaaaggaccaaagatgcaaatgagctaaattttaggggac 34019168  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    |||||||||||| | | ||| |||| || ||||||||||||||||| ||| ||||||  ||||||||| ||||||    
T  34019169 caaaattgtagtgtttgtacctagggggtcaaaattgcaagtttttgaaagttaagg--ggaaaaatgtacttta 34019241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 46721190 - 46721321
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||  | ||||| ||||  |||||||||||||| |||| |||| | ||||||||||||| | ||| |||| ||  ||||| |||| |||||    
T  46721190 ggtcaaaattgaccagaaggaccaaatatgcaaaggggctaaatcttaggggactaaaattgtagtttttgtacatagggggttaaaatcgcaacttttt 46721289  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||| ||| |||  ||||| ||||||||||||    
T  46721290 aaaagttagggggagaaaagtgcactttagcc 46721321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 5029682 - 5029783
Alignment:
Q  259 gcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    |||| ||||||||||||| |||||  |||||||| ||||   |||||||||||||||||||||||| |||| |||  | |||| |||||| |||||||||    
T  5029682 gcaatggggctaattcttaggggggaaaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 5029780  T
Q  359 gcc 361  Q
    |||    
T  5029781 gcc 5029783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 47615591 - 47615649
Alignment:
Q  303 cttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||| |||||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  47615591 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 47615649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 256 - 358
Target Start/End: Original strand, 53616012 - 53616114
Alignment:
Q  256 attgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcact 355  Q
    |||||||||| |||||||||||||||||  |||||||||||| | ||| || |     |||||| ||||| ||||||| |||||||||||||| ||||||    
T  53616012 attgcaaaggagctaattcttggggggctgaaattgtagtttttgtacataaggaattaaaattacaagtgtttaaaagttaagggaggaaaagtgcact 53616111  T
Q  356 tta 358  Q
    |||    
T  53616112 tta 53616114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 358
Target Start/End: Complemental strand, 51347436 - 51347271
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    ||||||||||||| || ||||||||| || |||||  |||||| |||||| |||| ||||||| ||||||| ||| ||| |||| ||||| |||||||||    
T  51347436 taattacacacgtagcctgccacgtatgcgttgactaggtcaacattgatcaaaatgatcaaagttgcaaacgggttaaatcttagggggtcaaaattgt 51347337  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
      ||| | | | |||  | |||||||||||| ||||| ||| ||||| | || ||| |||||||||    
T  51347336 catttttgttcatagaggaccaaaattgcaactttttcaaacttaagagggggaaagtgcacttta 51347271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 287
Target Start/End: Original strand, 10583976 - 10584067
Alignment:
Q  196 attacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaa 287  Q
    |||||| |||||||||||||| ||||  |||||  ||||||||||||  |||||| |||| |||||||||||||||| |||| ||||||||||    
T  10583976 attacatacgtggcatgccacttaggtgttgacttggtcaaaattgaccaaaagg-tcaatattgcaaaggggctaaatcttagggggccaaa 10584067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 18009876 - 18009931
Alignment:
Q  4 attcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaaga 62  Q
    |||||||||||||||||||||||   ||||||||||||| |||||||||||| ||||||    
T  18009876 attcatgagtttgggtttgaatg---gaagaagaagaacatggaggagtatgtagaaga 18009931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 292
Target Start/End: Complemental strand, 26722708 - 26722601
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | ||||||||||||||||||||||| ||||| |||||  |||||||||||   |||||| |||  |||||||||||||||| || | |||| |    
T  26722708 ttaatttagtaattacacacgtggcatgccacttaggcgttgactaggtcaaaattggctaaaagg-tcactattgcaaaggggctaaatcataggggac 26722610  T
Q  284 caaaattgt 292  Q
    |||||||||    
T  26722609 caaaattgt 26722601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 49401413 - 49401497
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggct 269  Q
    ||||||||||||||||| |  ||   ||||||||||||||||| | ||||||||||| ||||||||| |||| |||||| |||||    
T  49401413 ttaattcaataattacatatatgatgtgccacgtaggcattgatcagtcaaaattgacaaaaaggataaaaaatgcaaatgggct 49401497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 11671313 - 11671441
Alignment:
Q  232 tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaa 331  Q
    ||||||||||| ||||||| ||||  || ||||||| ||| || | ||||| ||||  |||||||| |||| ||||| ||| |||||||||||||||| |    
T  11671313 tcaaaattgatcaaaaggaccaaagatgtaaaggggttaaatcatagggggtcaaatctgtagtttttatatttagggggctaaaattgcaagtttttga 11671412  T
Q  332 aaattaagggaggaaaaa-tgcactttagcc 361  Q
    || |||  || ||||||| ||||||||||||    
T  11671413 aagtta--ggcggaaaaagtgcactttagcc 11671441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 185 - 358
Target Start/End: Original strand, 54986931 - 54987103
Alignment:
Q  185 ttaattcaataattacacacgt-ggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| |||||||| |||| | ||| |||||| |||  ||||||||||||||||||   |||| |||||||  |||||||| ||||| |||| | |||     
T  54986931 ttaattaaataattaaacacctaggcgtgccacatagaaattgaccggtcaaaattggccaaaatgatcaaagatgcaaaggagctaaatcttagagggt 54987030  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    ||||||| |||||| ||||| |||| | | ||||| |||| ||||| ||| |||  || |||||| |||||||||    
T  54987031 caaaattatagtttttatacataggggactaaaatcgcaactttttgaaactta--gggggaaaagtgcacttta 54987103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 53897231 - 53897173
Alignment:
Q  232 tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaatt 290  Q
    ||||||||||  |||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  53897231 tcaaaattgaccaaaaggatcaaagttgcaaatgggctaatacttagggggccaaaatt 53897173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 265 - 362
Target Start/End: Original strand, 535787 - 535884
Alignment:
Q  265 gggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||||| |||| |||||  |||||| ||||||  ||||||| | | |||||||||||||||||| ||| ||| ||| |||||| | |||||||||||    
T  535787 gggctaaatcttagggggtgaaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcca 535884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 5001260 - 5001200
Alignment:
Q  301 tacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||| ||||||||||||||| |||| |||  || |||||||||| ||||||||||||    
T  5001260 tacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttagcc 5001200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 6171168 - 6171223
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattg 240  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||   ||||||||||    
T  6171168 ttaattcaataattacacatgtggcgtgccaagtaggcattgattagtcaaaattg 6171223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 361
Target Start/End: Original strand, 28263129 - 28263212
Alignment:
Q  278 gggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||||| ||||  |||| | || ||||||||| ||||  |||||||| ||| ||| |||||| ||||||||||||    
T  28263129 gggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcactttagcc 28263212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 32829915 - 32829829
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattga-ccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaa 271  Q
    |||||||||||| ||||||| ||||||||||| |||   |||| ||||||||||||||| |||||| |||   |||||||||||||||    
T  32829915 ttaattcaataaatacacacatggcatgccacatagtggttgacccggtcaaaattgatcaaaagg-tcacttttgcaaaggggctaa 32829829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 51470425 - 51470555
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||| ||||||| |||| |||||| || ||||| |||| ||||  | ||||||| ||||   |||||||| |  | |||||||||||||||    
T  51470425 ggtcaaaattgatcaaaaggaccaaagttgcaatggagctaaatcttaggggtgctaaattgtggttttggtacttaggggatctaaattgcaagttttt 51470524  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||| || |||| |||| | ||||||||||||    
T  51470525 gaaagtt-aggggggaagagtgcactttagcc 51470555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 288
Target Start/End: Original strand, 26723786 - 26723889
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||| |||||||||||| || || |||||  ||||||||||||  |||||| |||  |||||||||||||||| || | |||| |    
T  26723786 ttaatttagtaattacacatgtggcatgccacttaagcgttgactaggtcaaaattgactaaaagg-tcactattgcaaaggggctaaatcataggggac 26723884  T
Q  284 caaaa 288  Q
    |||||    
T  26723885 caaaa 26723889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 362
Target Start/End: Original strand, 53901391 - 53901488
Alignment:
Q  263 aggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||||||||  || ||||||||| |||||||||| | |||||| |  | ||||||||||| ||||| ||| |||  || |||||| |||||||||||||    
T  53901391 aggggctaatatttagggggccaacattgtagtttttgtacttaaggagtcaaaattgcaacttttttaaactta--gggggaaaagtgcactttagcca 53901488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 6e-57; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 40255597 - 40255773
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||| ||| |||| |||||||    
T  40255597 ttaattaaataattacacacgtggcacgccacgtaggcattgaccggtcaaaattgatcaaaaagattaaaattgcaatggggttaaatcttagggggcc 40255696  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||||| || ||||| || ||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  40255697 aaaattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcactttagcc 40255773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 28538852 - 28538676
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||||||| |||| ||||||     
T  28538852 ttaattcattaattacacacgtggcatgccacatagacattgaccggtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggct 28538753  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | |||||| | || ||||||||||||||||| ||| ||| ||| |||||| ||||||||||||    
T  28538752 aaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcactttagcc 28538676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 36486413 - 36486589
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||| |||| |||| ||    
T  36486413 ttaatttattaattacacacgtggcatgccacgtaggcattgaccggtcaaaattgacaaaaaggatcaaagttgcaaagggactaaatcttaggggacc 36486512  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | |||||||| || ||||||||||||||||||||| ||| ||| | |||| ||||||| ||||    
T  36486513 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcc 36486589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 185 - 358
Target Start/End: Original strand, 28539745 - 28539917
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| |||| |||| |||| ||    
T  28539745 ttaatttattaattacacacgtggcatgccacgtaggcattgaccggtcaaaattggcaaaaaggatcaaagttgcaaagggactaaatcttaggggacc 28539844  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    ||||||||||||| | |||||||  || ||||||||||||||||||||| || |||| ||||||||||||||||    
T  28539845 aaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagtt-aggggggaaaaatgcacttta 28539917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 33160212 - 33160387
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||   |||||||| ||| |||||| ||| |||| ||||  |||| |    
T  33160212 ttaattcaataattacacatgtggcgtgccacgtaggcattgaccggtcaaaattggctaaaaggattaaagttgcaatggg-ctaaatcttaaggggtc 33160310  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||| |||||| ||||||||||||    
T  33160311 aaaattgtagtttctatacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagcc 33160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 185 - 359
Target Start/End: Complemental strand, 36485476 - 36485302
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||||| ||||||||  ||||||||||||  |||||||||||||||||||||||| ||||| ||||||| ||||||||||| ||| |||| |||||||    
T  36485476 ttaattcattaattacatccgtggcatgccatataggcattgaccggtcaaaattgacaaaaatgatcaaagttgcaaaggggttaaatcttagggggcc 36485377  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttag 359  Q
    |||||| |||||| | |||||| |||| |||||||| |||||||| ||| ||| ||| |||||||||||||||||    
T  36485376 aaaattatagtttttgtacttaagaggtcaaaattgtaagttttttaaagttaggggtggaaaaatgcactttag 36485302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 18486826 - 18487003
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||  ||||||| ||||  |||||||||||||| |||| ||||||    
T  18486826 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggc 18486925  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||| ||||||| || ||| ||||||||||||    
T  18486926 caaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcactttagcc 18487003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 185 - 358
Target Start/End: Complemental strand, 24333089 - 24332916
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| ||||  |||||||||| ||| |||| | ||| |    
T  24333089 ttaatttaataattacacacgtggcatgccacgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtc 24332990  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    ||||||||||||| | ||| || | |||||||||||||||||||| ||| ||||||| | |||| |||||||||    
T  24332989 aaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 24332916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 25523246 - 25523069
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccgg-tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | ||||||||||||||||| ||||||||||| ||||     ||||||||||| ||||||||||||  |||||||||||||| |||| |||||     
T  25523246 ttaattaattaattacacacgtggcaggccacgtaggcgttgaataaatcaaaattgatcaaaaggatcaaagatgcaaaggggctaaatcttagggggt 25523147  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||| | |||||||| ||| |||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  25523146 caaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 25523069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 16650779 - 16650956
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccgg-tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||||| |||||||||||||||||||||||  | || |||||  | ||||||||||  ||||||| ||||  |||||| |||||||  ||| ||||||    
T  16650779 ttaattcattaattacacacgtggcatgccacacatgcgttgacttgatcaaaattgaccaaaaggaccaaagatgcaaatgggctaaaccttagggggc 16650878  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||||||||||||| |||||||||| || ||||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  16650879 taaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcc 16650956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 1797222 - 1797397
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||| |||| | |||||| ||||||||||||||| ||||  ||| ||    
T  1797222 ttaattcaataattacacatgtggcgtgccacataggcattgaccggtcaaaattgaaaaaaggaatcaaagttgcaaaggggctaaatcttaagggacc 1797321  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | |   || |  ||||||||||||||||||||||| |||| || | |||||| ||||||||||    
T  1797322 aaaattgtagtttttgtttataaggagccaaaattgcaagtttttaaaacttaaagg-gaaaaaatccactttagcc 1797397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 185 - 358
Target Start/End: Original strand, 20216687 - 20216861
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| |||||||||||||||| | |||||  ||||| ||||||| |||||||||||   ||||||  |  |||||||| |||||||||||||||||||    
T  20216687 ttaatttaataattacacacgtgacctgccatataggcgttgaccgagtcaaaattgacgtaaaggactactattgcaaatgggctaattcttggggggc 20216786  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    |||||||||||||| | ||  ||||  || |||||||||||||||| ||||||||||| |||||| |||||||||    
T  20216787 caaaattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcacttta 20216861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 19753088 - 19752912
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||  ||||||| ||||  ||||| |||||||| || | ||||||    
T  19753088 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaatggggctaaatcatagggggc 19752989  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||| | |||||||| |||||||||||||||||||| ||| || |||| |||||| ||||||||||||    
T  19752988 caaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcc 19752912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 190 - 362
Target Start/End: Original strand, 22940552 - 22940724
Alignment:
Q  190 tcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaa 288  Q
    |||||||||| |||||||||||||||| ||||| |||||  ||||||||||||  |||||||| |||  || ||||||||||| | || |||| | ||||    
T  22940552 tcaataattatacacgtggcatgccacttaggcgttgacttggtcaaaattgaccaaaaggataaaagatgaaaaggggctaaattttaggggtc-aaaa 22940650  T
Q  289 ttgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||| ||| | |||||||| |||||||||||||||||||| ||| ||||||| |||||| |||||||||||||    
T  22940651 ttgtaatttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcca 22940724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 185 - 353
Target Start/End: Complemental strand, 1015660 - 1015492
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||||||||||||| |||||||| ||||||||||||||  |||||||||||   ||||||| ||||  ||||||||| ||||||||| |||||      
T  1015660 ttaattcaataattacacatgtggcatgtcacgtaggcattgattggtcaaaattggggaaaaggaccaaatatgcaaagggactaattcttagggggtt 1015561  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgca 353  Q
    |||||||||| || | |||  ||| ||||||||||| || ||||||||| ||| |||||||||| ||||    
T  1015560 aaaattgtaggttttgtacacagggggccaaaattgtaactttttaaaagttaggggaggaaaagtgca 1015492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 185 - 362
Target Start/End: Complemental strand, 20214372 - 20214195
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| |||||||||||||||||| |||||  ||||| ||||||| ||||||||||| | ||||||  |  |||||||| ||| ||||||||| |||||    
T  20214372 ttaatttaataattacacacgtggcctgccatataggcgttgaccgagtcaaaattgacataaaggactactattgcaaatgggataattcttgaggggc 20214273  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    |||||||||||||| | ||| |||   || |||||||||||||||| ||| ||||||| |||||| |||||||||||||    
T  20214272 caaaattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcactttagcca 20214195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 185 - 362
Target Start/End: Complemental strand, 1796231 - 1796053
Alignment:
Q  185 ttaattcaataa-ttacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttgggggg 282  Q
    |||||||||||| ||||||| ||||| |||||  ||||| ||||| | |||||||||||   ||||||  |  |||||||| ||| |||||||||||||     
T  1796231 ttaattcaataaattacacatgtggc-tgccatataggcgttgactgagtcaaaattgaactaaaggactactattgcaaatgggttaattcttggggga 1796133  T
Q  283 ccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
     |||||||||||||| | |||||||| ||||||| |||||||||||| ||| ||| ||| ||||||||||||||||||||    
T  1796132 tcaaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcactttagcca 1796053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 19754054 - 19754232
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| | |||||||||| ||||    |||||||||| | ||||||| ||||  ||||| |||||||| || | ||||||    
T  19754054 ttaattaattaattacacacgtggccttccacgtaggcgttgaataagtcaaaattgttcaaaaggaccaaagatgcaatggggctaaatcatagggggc 19754153  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag-gaaaaatgcactttagcc 361  Q
    |||||||||||||| | || ||||| |||||||||||||||||||| ||| ||| ||| |  |||||||||||||||||    
T  19754154 caaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaagttaggggggaaaaaaatgcactttagcc 19754232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 185 - 358
Target Start/End: Original strand, 1016789 - 1016961
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||   |||| || |||   |||||||| ||||||||||  || | |    
T  1016789 ttaattcaataattacacacgtgacatgctacgtaggcattgaccgatcaaaattggggaaaatgaccaactatgcaaaggagctaattctt-aggagtc 1016887  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    ||||||||||||| | ||| ||| || |||||||| ||| ||||||||||||| |||   |||||| |||||||    
T  1016888 aaaattgtagtttttgtacatagaagaccaaaattacaattttttaaaaattagggggaaaaaaatacacttta 1016961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 194 - 361
Target Start/End: Complemental strand, 25055580 - 25055412
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgaccgg-tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    ||||||||||||||||||||||  |  ||||||||  | ||||||||||| ||||||| ||||  |||||| ||||||| |||| |||||||||||||||    
T  25055580 taattacacacgtggcatgccaaatcagcattgacttgctcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgt 25055481  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||| ||||| |||| |  ||||||||||||   || ||| |||  || |||||| ||||||||||||    
T  25055480 agtttttatacataggggatcaaaattgcaagaagtttaaagttagagggggaaaagtgcactttagcc 25055412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 18485322 - 18485138
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    ||||||||| |  ||||||||||||  |||||||||||||| |||| ||||||    
T  18485322 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattaaccaaaaggatcaaagatgcaaaggggctaaatcttagggggc 18485223  T
Q  284 c-------aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |       |||||||| ||||  ||||||||| |||||||||||||||||||| ||| |||  || | |||| ||||||||||||    
T  18485222 caaaacccaaaattgttgttttgatacttagggggccaaaattgcaagttttttaaagttagaggggaaaaagtgcactttagcc 18485138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 358
Target Start/End: Complemental strand, 42195300 - 42195137
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    ||||||||||||||||||||||  |  || |||||  ||||||||||||  ||||||| ||||  |||||||||||||| |||| |||| ||||||||||    
T  42195300 taattacacacgtggcatgccaaatcagcgttgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgt 42195201  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    || || | ||| |||| ||||||||| |||| ||||| ||| ||||||| |||||| |||||||||    
T  42195200 agattttgtacatagggggccaaaatcgcaacttttt-aaagttaaggg-ggaaaagtgcacttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 185 - 320
Target Start/End: Original strand, 25524022 - 25524158
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||  |||||||||||| ||||    |||||||||||  |||||||  |||  |||||||||||||| |||| |||||     
T  25524022 ttaattaattaattacacacgtggtctgccacgtaggcgttgaataagtcaaaattgaccaaaaggactaaagatgcaaaggggctaaatcttagggggt 25524121  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattg 320  Q
    ||||||| |||||| | ||||||||||||||||||||    
T  25524122 caaaattatagtttttgtacttaggaggccaaaattg 25524158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 5778806 - 5778937
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| ||| ||||||||||||||||    
T  5778806 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggcaaaaattgcaagttttt 5778905  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||| |||  || |||||| ||||||||||||    
T  5778906 gaaagttagagggggaaaagtgcactttagcc 5778937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 266 - 365
Target Start/End: Original strand, 25056387 - 25056486
Alignment:
Q  266 ggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagccatat 365  Q
    |||||| |||| ||||| ||||||||||||||  ||||||||| || ||||||||||||||||| ||| ||| | | |||||| ||||||||||||||||    
T  25056387 ggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcactttagccatat 25056486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 185 - 291
Target Start/End: Complemental strand, 5961582 - 5961476
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||| |||||||||||||| || |||| ||||||||||| |||| || | ||||||||||||  |||||||||| ||| | || ||||||     
T  5961582 ttaattaaataataacacacgtggcatgtcatgtagacattgaccggttaaaaatggtcaaaaggatcaaagatgcaaaggggttaaattttagggggct 5961483  T
Q  285 aaaattg 291  Q
    |||||||    
T  5961482 aaaattg 5961476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 187 - 308
Target Start/End: Complemental strand, 16650167 - 16650045
Alignment:
Q  187 aattcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcca 285  Q
    |||||| || ||||||||||||||||||||  | ||||||||  ||||||||||||  ||||||| ||||  |||||||||| ||| |||| | ||| ||    
T  16650167 aattcattatttacacacgtggcatgccacacatgcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtca 16650068  T
Q  286 aaattgtagtttctatacttagg 308  Q
    |||||||||||| | ||||||||    
T  16650067 aaattgtagtttttgtacttagg 16650045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 281 - 361
Target Start/End: Original strand, 25524148 - 25524229
Alignment:
Q  281 ggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaatta-agggaggaaaaatgcactttagcc 361  Q
    ||||||||||||||||| | |||||||| |||||||||| ||| |||||||||||||  ||| |||||| ||||||||||||    
T  25524148 ggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagcc 25524229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 276
Target Start/End: Original strand, 14061537 - 14061628
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattctt 276  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||| || ||||||  | ||||||||||||| |||||| | ||||| ||||    
T  14061537 ttaattcaataattatatacgtggcatgccacataggcgttgaccagtaaaaatttgtcaaaaggatcaaaaatgcaaatgagctaaatctt 14061628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 231 - 333
Target Start/End: Original strand, 2686372 - 2686474
Alignment:
Q  231 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 330  Q
    |||||||||||| ||||||| ||||  ||||| | |||||| || | |||| |||||||| |||||| | |||||| |||  ||||||||||||||||||    
T  2686372 gtcaaaattgatcaaaaggaccaaagatgcaatgaggctaaatcataggggaccaaaattatagtttttgtacttaagagatcaaaattgcaagttttta 2686471  T
Q  331 aaa 333  Q
    |||    
T  2686472 aaa 2686474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 329
Target Start/End: Original strand, 5730832 - 5730931
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||| ||||| | |||| |||||| |||| ||| |||| ||||| | ||||||| ||||   |||||||| ||||||||||| ||||||||    
T  5730832 ggtcaaaattgatcaaaagaaccaaagttgcaatggggttaaatcttagggggactaaattgtggttttggtacttagggggccaaaattggaagttttt 5730931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 329
Target Start/End: Complemental strand, 7311685 - 7311622
Alignment:
Q  266 ggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    |||||| |||| |||||| ||||||||||||| | ||||| ||||||||| |||||||||||||    
T  7311685 ggctaaatcttagggggctaaaattgtagtttttgtacttgggaggccaatattgcaagttttt 7311622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 361
Target Start/End: Complemental strand, 5778016 - 5777901
Alignment:
Q  244 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag 343  Q
    ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| || ||||||||||||||||| ||| |||  || |    
T  5778016 aaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtta--gggg 5777919  T
Q  344 gaaaaatgcactttagcc 361  Q
    | ||| ||||||||||||    
T  5777918 ggaaagtgcactttagcc 5777901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 318
Target Start/End: Complemental strand, 21835157 - 21835083
Alignment:
Q  244 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaat 318  Q
    |||||||||||| ||||||||||| ||| |||| ||||| |||||||||||||| | ||| |||| || ||||||    
T  21835157 aaaaggatcaaagttgcaaaggggttaaatcttagggggtcaaaattgtagtttttgtacatagggggtcaaaat 21835083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 361
Target Start/End: Complemental strand, 33158180 - 33158098
Alignment:
Q  279 ggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||| |||||||||||||| | ||||||||  | ||||||||||||||||| ||| ||| |||   |||||||||||||||||    
T  33158180 ggggtcaaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagcc 33158098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 5730502 - 5730441
Alignment:
Q  301 tacttaggaggccaaaattgcaagtttttaaaaattaa-gggaggaaaaatgcactttagcc 361  Q
    ||||||||| ||||||||||||||||||| ||| |||| ||| |||||| ||||||||||||    
T  5730502 tacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagcc 5730441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 427 - 508
Target Start/End: Complemental strand, 20424952 - 20424871
Alignment:
Q  427 ggatttaaaacctctttggaaacctcgacaatagaggaacccaaaccacaccaagatggtggttcttgaatatagtccaagt 508  Q
    ||||||||||||||||| ||||||  |||| | || ||||| |||||| |||||||||| || |||||| ||||||| ||||    
T  20424952 ggatttaaaacctctttagaaaccatgacattggaagaacctaaaccataccaagatgggggatcttgattatagtctaagt 20424871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 24468509 - 24468601
Alignment:
Q  183 aattaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattc 274  Q
    |||||||| ||||||||||||||||||||| ||| || ||| |||  | |||||||||||| |||||||  || |||| ||| ||||||||||    
T  24468509 aattaattgaataattacacacgtggcatgacacataagcaatgattgagtcaaaattgattaaaaggactaatattgtaaatgggctaattc 24468601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 361
Target Start/End: Original strand, 42196133 - 42196301
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    |||||||||| |||||||||||  |  || |||||  ||||||||||||  ||||||| ||||  |||||| ||||||| |||| |||| | |||| |||    
T  42196133 taattacacatgtggcatgccaaatcagcgttgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggactaaaaatgt 42196232  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||| | ||| |||  ||||||| |  ||| ||||||||| ||| ||| || ||| ||||||||||||    
T  42196233 agtttttgtacatagagggccaaattcacaactttttaaaagttaggggggggaaagtgcactttagcc 42196301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 510
Target Start/End: Original strand, 12402285 - 12402368
Alignment:
Q  427 ggatttaaaacctctttggaaacctcgacaatagaggaacccaaaccacaccaagatggtggttcttgaatatagtccaagtat 510  Q
    ||||||||||| ||||| ||||||  |||| | || |||| ||||||| ||||||| || || ||||||||||| |||||||||    
T  12402285 ggatttaaaacatctttagaaaccatgacattggaagaactcaaaccataccaagacgggggatcttgaatataatccaagtat 12402368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 362
Target Start/End: Original strand, 41663768 - 41663827
Alignment:
Q  303 cttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    |||||| ||||||||| |||| ||||||||| |||| ||  |||||||||||||||||||    
T  41663768 cttagggggccaaaatcgcaactttttaaaacttaaagggtgaaaaatgcactttagcca 41663827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 2186901 - 2186774
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||  ||||||| ||||  || |||  |||||| |||| ||||   ||||||||||||| | ||| ||| || |||||||||||| |||||    
T  2186901 ggtcaaaattgaccaaaaggaccaaagatgtaaaatggctaaatcttaggggattaaaattgtagtttttgtacatagaagaccaaaattgcaacttttt 2186802  T
Q  330 aaaaattaagggaggaaaaatgcacttta 358  Q
     ||| || |||| | ||||||||||||||    
T  2186801 gaaactt-agggggaaaaaatgcacttta 2186774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 10784770 - 10784592
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaa-ggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| ||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||    
T  10784770 ttaatttaataattacacacatggcgtgccccgtaggcattaaccggtcaaaattgataaaaaaggatcaaagttgcaaaggggctaaatctttgggggc 10784671  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaaggga-ggaaaaatgcactttagcc 361  Q
    |||||||||||||| |||||||||| ||  |||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  10784670 caaaattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggagggaaaagtgcactttagcc 10784592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 185 - 356
Target Start/End: Complemental strand, 29473253 - 29473082
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||| |||||    
T  29473253 ttaattcaataattacacatgtggcatgccacgtaggcattgaccggtaaaaattgacaaaaaggatcaaaattgcaaaggggccaattcttggagggcc 29473154  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactt 356  Q
    ||||||||  ||| | | | ||||   |||||||||||| ||||||||| ||||||| |||||| |||||||    
T  29473153 aaaattgttatttttgttcatagggaaccaaaattgcaactttttaaaacttaaggggggaaaagtgcactt 29473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 187 - 361
Target Start/End: Complemental strand, 14822534 - 14822360
Alignment:
Q  187 aattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaa 286  Q
    |||| |||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||| ||| |||||| | | |||| |||| |||||||||    
T  14822534 aatttaataattacacacgtggcgtgccacgtaagcattgaccggtcaaaatagattaaaaggattaaagttgcaatgagactaaatcttagggggccaa 14822435  T
Q  287 aattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||||||||| | |||||||||||||||||||| |||||||||||  ||||| |||||| |||||    
T  14822434 aattgtagtttctatacttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcactctagcc 14822360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 185 - 358
Target Start/End: Original strand, 1829528 - 1829701
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| || ||||||||||||||  |||||||||||||||||||||||||||||||  |||| || ||||  |||||||||||||| |||| |||||||    
T  1829528 ttaatttaacaattacacacgtggtgtgccacgtaggcattgaccggtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggcc 1829627  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||| ||| |||   |||| |||||||||    
T  1829628 aaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagttagggggaaaaaagtgcacttta 1829701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 16704422 - 16704598
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||||| |||||||| ||||||||| |||||||||||||||||  |||||||||| ||||||||||| | |||||||| |||||| ||||   ||  |    
T  16704422 ttaattcattaattacatacgtggcataccacgtaggcattgaccaatcaaaattgacaaaaaggatcatagttgcaaagaggctaaatcttaaaggatc 16704521  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | |||||||| || ||||||||||||||||| ||| |||||||||||||| ||||||||||||    
T  16704522 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcactttagcc 16704598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 187 - 361
Target Start/End: Original strand, 14823502 - 14823677
Alignment:
Q  187 aattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaa 286  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||  ||||| || ||  |||||| ||  |||| |||| |||||||||    
T  14823502 aatttaataattacacacgtggcgtgccacgtaggcattgaccggtcaaaattgaccaaaagaattaaggttgcaacggttctaaatcttagggggccaa 14823601  T
Q  287 aattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaa-tgcactttagcc 361  Q
    ||||||||||||| |||||| | ||| |||||||||||||||| ||||||||||| | ||||| ||||||||||||    
T  14823602 aattgtagtttctgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcactttagcc 14823677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 185 - 329
Target Start/End: Original strand, 26574979 - 26575123
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||||| ||||||| || |||||||||||||||| |||||||||||||||||||  ||||||||||||| ||||||||| | ||| |||| |||||||    
T  26574979 ttaattcattaattacgcatgtggcatgccacgtagacattgaccggtcaaaattggcaaaaaggatcaaagttgcaaaggagttaaatcttagggggcc 26575078  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||| | |||||| | ||  ||||||||||||||||    
T  26575079 aaaattgtagtttttgtacttaaggggttaaaattgcaagttttt 26575123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 7316218 - 7316395
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||  ||||||| || |  |||||||||||||| ||||  |||||    
T  7316218 ttaattaattaattacacacgtggcttgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccatagatgcaaaggggctaaatcttaaggggc 7316317  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||| ||||| ||| ||||| |||||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  7316318 caaaattgtggtttcaatatttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 7316395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 185 - 333
Target Start/End: Original strand, 10785838 - 10785986
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||||||||||||| ||||| ||| ||||||||  |||||||||| |||||||||||||| ||||||||||||||| ||||  ||||      
T  10785838 ttaatttaataattacacacgtggcgtgccatgtatgcattgactagtcaaaattggtaaaaaggatcaaagttgcaaaggggctaaatcttaaggggtt 10785937  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaa 333  Q
    ||||||||||||| | |||||||| ||  |||||||||| |||||||||    
T  10785938 aaaattgtagtttttgtacttagggggttaaaattgcaaatttttaaaa 10785986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 185 - 362
Target Start/End: Complemental strand, 7315056 - 7314879
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||  |||| || ||||  |||||||||||||| |||| |||||     
T  7315056 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggt 7314957  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||||||| ||||  ||||||||| |||||||||||||||||||| ||| |||  || |||||| |||||||||||||    
T  7314956 caaaattgttgttttgatacttagg-ggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcca 7314879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 8659396 - 8659265
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| ||||||||||||||||||||    
T  8659396 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagttttt 8659297  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||| |||  || |||||| ||||||||||||    
T  8659296 gaaagttagagggggaaaagtgcactttagcc 8659265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 27437959 - 27437828
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    |||||||||||   ||||||| |||| ||||||||| ||||| |||| ||||| |||||||||||||| |||   |||| |||||||||||||| |||||    
T  27437959 ggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttt 27437860  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||| |||||||  ||||| ||||||||||||    
T  27437859 taaagttaaggggagaaaagtgcactttagcc 27437828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 34834549 - 34834677
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||  |||||||||||  |||||||||||||||||    
T  34834549 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttgatacttaggagatcaaaattgcaagttttt 34834648  T
Q  330 aaaaattaagggaggaaaaatgcacttta 358  Q
     ||| ||| ||  |||||| |||||||||    
T  34834649 gaaagttagggagggaaaagtgcacttta 34834677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 214 - 361
Target Start/End: Complemental strand, 26574765 - 26574619
Alignment:
Q  214 cacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggcc 313  Q
    |||||||||||| | ||||||||||||| ||||| ||||||| ||||||||||||||| ||||  |||  ||||| |||||||| | |||||||  |  |    
T  26574765 cacgtaggcattaatcggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttaagggatcaaaa-tgtagtttttgtacttagaggttc 26574667  T
Q  314 aaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||||| ||| |||  || || ||| ||||||||||||    
T  26574666 aaaattgcaagtttttgaaagttagaggtgggaaattgcactttagcc 26574619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 5658887 - 5658759
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||  |||||||||||| ||||||| ||||||| ||||  |||  |||||||||||||| | ||| ||||   | ||||||  || |||||    
T  5658887 ggtcaaaattgaccaaaaggatcaaagttgcaaatgggctaaatcttaagggatcaaaattgtagtttttgtacatagggaactaaaattataacttttt 5658788  T
Q  330 aaaaattaagggaggaaaaatgcacttta 358  Q
    |||| ||||||| ||||||||||||||||    
T  5658787 aaaacttaaggggggaaaaatgcacttta 5658759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 8660174 - 8660304
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||| | |||||||||||| |||||| || ||||| |||| ||||| | ||||||| ||||   |||||||| || |||||||||||||||||    
T  8660174 ggtcaaaattggtcaaaaggatcaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttagg-ggtcaaaattgcaagttttt 8660272  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||| ||| | | |||||| ||||||||||||    
T  8660273 gaaagttaggaggggaaaagtgcactttagcc 8660304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 194 - 360
Target Start/End: Original strand, 12382644 - 12382811
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    ||||||||||||||||||||||  || || ||||||  |||||||||    ||||||| ||||  |||||| ||| ||| |||| ||||  ||||||| |    
T  12382644 taattacacacgtggcatgccaaataagcgttgaccaagtcaaaattagctaaaaggaccaaagatgcaaaagggttaaatctttggggatcaaaattat 12382743  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagc 360  Q
    |||||  ||||||||| || ||||||| ||| |||||||||||||  || |||||| |||||||||||    
T  12382744 agttttaatacttagggggtcaaaattacaaatttttaaaaattagaggtggaaaagtgcactttagc 12382811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 361
Target Start/End: Complemental strand, 8821990 - 8821873
Alignment:
Q  244 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag 343  Q
    ||||||| |||| |||||| || ||||| |||| ||||| | ||||||| ||||   |||||||| |||||||||||||||||||| ||| |||  || |    
T  8821990 aaaaggaccaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggg 8821891  T
Q  344 gaaaaatgcactttagcc 361  Q
    ||||| ||||||||||||    
T  8821890 gaaaagtgcactttagcc 8821873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 3721743 - 3721612
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| ||||  |||| | ||||| | ||||   |||||||| || |||||||||||||||||    
T  3721743 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaaggggtctaaattatggttttggtacttagggggtcaaaattgcaagttttt 3721644  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||| |||  || |||||| ||||||||||||    
T  3721643 gaaagttagagggggaaaagtgcactttagcc 3721612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 8822777 - 8822895
Alignment:
Q  244 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag 343  Q
    ||||||| |||| ||||||  ||||||| |||| ||||| | ||||||| ||||   |||||||| || ||||||||||||||||| ||| |||| |  |    
T  8822777 aaaaggaccaaagttgcaattgggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagagg 8822876  T
Q  344 gaaaaatgcactttagcca 362  Q
    ||||| |||||||||||||    
T  8822877 gaaaagtgcactttagcca 8822895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 185 - 342
Target Start/End: Original strand, 26949110 - 26949264
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||||||| ||||| ||||| | |||||||||| ||||||||||||| ||||  |  |||  |||||||||| ||| |||| |  |       
T  26949110 ttaatttaataattacacatgtggcgtgccatgaaggcattgactggtcaaaattgatcaaaaacactaaagatgcaaaggggttaaatcttagaagatt 26949209  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaaggga 342  Q
    ||||||||||||| |||||||||  || ||||||||||| ||||| ||| ||||||||    
T  26949210 aaaattgtagtttttatacttag--gggcaaaattgcaa-tttttgaaagttaaggga 26949264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 27322067 - 27322168
Alignment:
Q  259 gcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    |||||||||||||||||| |||||  |||||||| ||||   |||||||| ||||||||||||||| |||| |||  | |||| |||||| |||||||||    
T  27322067 gcaaaggggctaattcttagggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 27322165  T
Q  359 gcc 361  Q
    |||    
T  27322166 gcc 27322168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 1828789 - 1828739
Alignment:
Q  311 gccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| |||||||||||||| || | |||||||||||||||||    
T  1828789 gccaaaattgcaaatttttaaaaattaaaggggaaaaaatgcactttagcc 1828739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 362
Target Start/End: Complemental strand, 16703734 - 16703569
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||||| ||||||||||||||| |||||||||| | ||||||||||         |||||||||||||| |||  |||||| ||| | || ||||||     
T  16703734 ttaattcattaattacacacgtggaatgccacgtaagtattgaccggt---------taaaaaggatcaaagttgggaaggggttaaattttagggggct 16703644  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||||||||||| | || ||| | |  ||||||||||||||||| |||  ||  || |||||| |||||||||||||    
T  16703643 aaaattgtagtttttgtatttatg-gatcaaaattgcaagtttttgaaagata--gggggaaaagtgcactttagcca 16703569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 361
Target Start/End: Complemental strand, 17496928 - 17496793
Alignment:
Q  231 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattctt-ggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    |||||||||||| ||||||| ||||  ||||||| || ||| |||| ||||||||||||||| ||||| | |||||||  ||  ||||||| ||||||||    
T  17496928 gtcaaaattgatcaaaaggaccaaagatgcaaagaggttaaatcttaggggggccaaaattgcagtttttgtacttagagggttaaaattgtaagttttt 17496829  T
Q  330 aaaaattaag----ggaggaaaaatgcactttagcc 361  Q
     ||| ||| |    || |||||||||||||||||||    
T  17496828 gaaagttagggggagggggaaaaatgcactttagcc 17496793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 26717046 - 26717144
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattg 291  Q
    |||||||| | |||||||||||  || ||||||||  ||||||||||||| |||||||||||| ||||||| | ||||| ||||  |||| ||||||||    
T  26717046 taattacataggtggcatgccaattaagcattgacttggtcaaaattgatcaaaaggatcaaagttgcaaaagagctaaatcttaaggggtcaaaattg 26717144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 3333010 - 3333095
Alignment:
Q  244 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    |||||||||||| ||||||||||||||| | || | |||  ||||||||||||| | ||| |||| ||||||||| |||| |||||    
T  3333010 aaaaggatcaaagttgcaaaggggctaaattttagagggttaaaattgtagtttttgtacatagggggccaaaatcgcaacttttt 3333095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 327
Target Start/End: Complemental strand, 12350898 - 12350832
Alignment:
Q  260 caaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttt 327  Q
    |||||||||||| |||| |||||  ||||||||||||| ||||| |||| || |||||||||||||||    
T  12350898 caaaggggctaaatcttagggggttaaaattgtagtttttatacatagg-ggtcaaaattgcaagttt 12350832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 27447963 - 27448014
Alignment:
Q  310 ggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||| || ||||||||| ||||||| |||||| ||||||||||||    
T  27447963 ggccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcc 27448014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 13345682 - 13345723
Alignment:
Q  187 aattcaataattacacacgtggcatgccacgtaggcattgac 228  Q
    ||||||||||||||||| |||||||||||| || ||||||||    
T  13345682 aattcaataattacacatgtggcatgccacatatgcattgac 13345723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 285 - 361
Target Start/End: Original strand, 6842308 - 6842384
Alignment:
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| |  || |||| |||||||||||||| ||||| ||| |||  || |||||| ||||||||||||    
T  6842308 aaaattgtagtttttgcacatagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagcc 6842384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 4e-52; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 31599965 - 31599789
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||| |||| |||| ||    
T  31599965 ttaatttattaattacacacgtggcatgccacgtaggcattgaccggtcaaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggacc 31599866  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | |||||||| || ||||||||||||||||||||| ||| ||| | |||| ||||||| ||||    
T  31599865 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcc 31599789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 185 - 362
Target Start/End: Original strand, 31600910 - 31601087
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||||  |||| |    
T  31600910 ttaattcattaattacacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaaggggtc 31601009  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||||||||||| | |||||||| || ||||||||||||||||||||| |||  || | |||| |||||||||||||    
T  31601010 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagaggggaaaaagtgcactttagcca 31601087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 185 - 358
Target Start/End: Original strand, 35935458 - 35935631
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||   |||||||| ||| |||||| | |||||| |||| |||||||    
T  35935458 ttaattcaataattatacacgtggcgtgccacataggcattgaccggtcaaaattggccaaaaggattaaagttgcaatgaggctaaatcttagggggcc 35935557  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    ||||||||||||| | |||||||| ||| |||||||||| ||||||||| ||||||| || ||| |||||||||    
T  35935558 aaaattgtagtttatgtacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcacttta 35935631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 52491534 - 52491708
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||  |||||||| ||| |||||| |||||||| | || |||||||    
T  52491534 ttaattcaataattacacacgtggc--gccacgtaggcattgacctgtcaaaattgaccaaaaggattaaagttgcaatggggctaaattttagggggcc 52491631  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||||| || ||||  | |||||||||||||||||| ||| ||||||| |||||| | ||||||||||    
T  52491632 aaaattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaagttaagggtggaaaagtacactttagcc 52491708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 185 - 358
Target Start/End: Original strand, 8758766 - 8758935
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| ||||||||||||||||||    |||||||||||||| || ||||||||||  |||||||| |||||||||| || ||||| ||||  ||||||    
T  8758766 ttaattaaataattacacacgtggc----cacgtaggcattgatcgatcaaaattgaccaaaaggattaaaattgcaatggagctaaatcttaaggggcc 8758861  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||| |||||| |||| ||||    
T  8758862 aaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcatttta 8758935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 10448185 - 10448361
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||   ||||||| ||||  |||||||||||||  |||| | |||||    
T  10448185 ttaattcaataattacacacgtggcatgccacgtaggcattgactggtcaaaattggccaaaaggaccaaagatgcaaaggggctatatcttagagggcc 10448284  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | ||| |||| ||| ||||| |||| ||||| ||| ||| ||||||  || ||||||||||||    
T  10448285 aaaattgtagtttttgtacatagggggctaaaatcgcaactttttgaaacttaggggaggggaagtgcactttagcc 10448361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 194 - 361
Target Start/End: Original strand, 1290131 - 1290299
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    |||||||||| |||||||||||| ||||| ||||| |||||||||||||  ||||||| ||||  |||||||||| ||| |||| |||||| ||||||||    
T  1290131 taattacacatgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagggggctaaaattgt 1290230  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||| | |||||||  ||||||||||||||| |||| ||| ||||||| |||||| ||||||||||||    
T  1290231 agtttttgtacttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcactttagcc 1290299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 229 - 361
Target Start/End: Complemental strand, 1963328 - 1963196
Alignment:
Q  229 cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttt 328  Q
    |||||||||||| ||||||||| ||  ||||||||||||||||||||| |||||| ||||||||||||| | ||| ||||||||||||||||||| ||||    
T  1963328 cggtcaaaattgctaaaaaggaccactattgcaaaggggctaattcttagggggctaaaattgtagtttttgtacataggaggccaaaattgcaactttt 1963229  T
Q  329 taaaaattaagggaggaaaaatgcactttagcc 361  Q
    | ||| ||||||| |||||| ||||||||||||    
T  1963228 tgaaagttaaggggggaaaagtgcactttagcc 1963196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 185 - 358
Target Start/End: Complemental strand, 35934518 - 35934347
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||  ||||| || ||| |||||| |||||||| ||||  ||||||    
T  35934518 ttaattcattaattacacacgtgacatgccacgtaggcattgactggtcaaaattgaccaaaagaattaaagttgcaatggggctaaatcttaaggggcc 35934419  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    |||||| || ||||| |||||||| | |||||||| ||||||||| ||| |||  || |||||| |||||||||    
T  35934418 aaaattataatttctttacttaggggaccaaaattacaagtttttgaaagtta--gggggaaaagtgcacttta 35934347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 17388135 - 17388311
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    ||||||||||||||||||||||||| |||||  ||||| ||||||  |||||||||||   ||||||  |  |||| |||||||||||||||||||||||    
T  17388135 ttaattcaataattacacacgtggcctgccatataggcgttgaccaagtcaaaattgacctaaaggactactattgtaaaggggctaattcttggggggc 17388234  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||| | |||||| | | |||||||||||||||||| ||| || |||| |||||| ||||||||||||    
T  17388235 caaaattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcc 17388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 212 - 361
Target Start/End: Complemental strand, 8757822 - 8757675
Alignment:
Q  212 gccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggagg 311  Q
    ||||||||||||||||||| ||||||||||  |||||||| |||||||||| |||||||| ||||  ||| ||||||||||||||||| |||||||| ||    
T  8757822 gccacgtaggcattgaccg-tcaaaattgaccaaaaggattaaaattgcaatggggctaaatcttaagggtccaaaattgtagtttctgtacttaggggg 8757724  T
Q  312 ccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    | ||||||| |||||||| ||| ||||||| | |||| ||||||||||||    
T  8757723 ctaaaattgtaagtttttgaaagttaaggg-gaaaaagtgcactttagcc 8757675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 186 - 361
Target Start/End: Complemental strand, 10447182 - 10447006
Alignment:
Q  186 taattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcca 285  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| ||||||    ||||||| ||||  |||||||||||||| |||| |||||  |    
T  10447182 taattcaataattacacacgtggcgtgccacgtaggcattgactggttaaaattagccaaaaggaccaaagatgcaaaggggctaaatcttaggggggta 10447083  T
Q  286 aaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaag-ggaggaaaaatgcactttagcc 361  Q
    ||||||| |||| | ||| |||| ||| |||||||||| ||||| ||| ||||| || |||||| ||||||||||||    
T  10447082 aaattgtggtttttgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgcactttagcc 10447006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 185 - 362
Target Start/End: Original strand, 50909597 - 50909775
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattctt-ggggggc 283  Q
    |||||| ||||||||||| ||| ||||| ||| ||| ||||||||||||||||||||| ||||||| ||||  |||||||||||||| ||||  |||||     
T  50909597 ttaattaaataattacacgcgttgcatgtcacatagacattgaccggtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaatcttaagggggt 50909696  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaa-tgcactttagcca 362  Q
    |||||||||||||| ||||| ||||  | |||||| |||| ||||||||| || |||| ||||||| |||||||||||||    
T  50909697 caaaattgtagtttttatacatagggagtcaaaatcgcaactttttaaaactt-agggtggaaaaagtgcactttagcca 50909775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 17383169 - 17382993
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    ||||||||||||||||||| ||||  |||||  ||||| ||||||  |||||||||||   ||||||  |  |||||||||||| |||||||||||||||    
T  17383169 ttaattcaataattacacaggtggtctgccatataggcgttgaccaagtcaaaattgacctaaaggactactattgcaaaggggataattcttggggggc 17383070  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||| | |||||| | | |||||||||||||||||| ||| ||| |||| ||||| ||||||||||||    
T  17383069 caaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttagggga-gaaaagtgcactttagcc 17382993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 194 - 361
Target Start/End: Original strand, 1835035 - 1835203
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    ||||||||||||||||||||||  || || ||||||  ||||||||||   ||||||| ||||  |||||||||||||| |||| ||||| |||||||||    
T  1835035 taattacacacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgt 1835134  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||  ||||||||| || ||||||||||||||||| ||| ||| ||  |||||| ||||||||||||    
T  1835135 agttttaatacttagggggtcaaaattgcaagtttttgaaagttagggatggaaaagtgcactttagcc 1835203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 185 - 358
Target Start/End: Complemental strand, 12129800 - 12129626
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||| |||| || ||||  |||||| ||||||| ||||  ||||     
T  12129800 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgatcaaaatgaccaaagatgcaaatgggctaaatcttaaggggt 12129701  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    |||||||||||||| | |||||| | |||||||||||||||||||| ||| ||||| | |||||| |||||||||    
T  12129700 caaaattgtagtttttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcacttta 12129626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 258 - 348
Target Start/End: Original strand, 21539069 - 21539159
Alignment:
Q  258 tgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaa 348  Q
    |||||||| ||||| |||| ||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||    
T  21539069 tgcaaaggagctaaatcttagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaattaagggtggaaaa 21539159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 194 - 362
Target Start/End: Original strand, 1964374 - 1964543
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    ||||||||||||||||||||||  |  || |||||  ||||||||||| ||||||||| ||  || ||||||||| ||||||||  ||| ||||||||||    
T  1964374 taattacacacgtggcatgccaaatcagcgttgacttggtcaaaattgctaaaaaggaccactatcgcaaaggggataattcttaagggaccaaaattgt 1964473  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||| | | | |||| ||||||||||| || ||||||||| ||||||| |||||| |||||||||||||    
T  1964474 agtttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcactttagcca 1964543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 230 - 359
Target Start/End: Original strand, 19750545 - 19750673
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    |||||||| |||  |||||||||||| |||||| |||||||| |||| |||||  ||||||||||||| | |||||||| ||||||||||||||||||||    
T  19750545 ggtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagttttt 19750644  T
Q  330 aaaaattaagggaggaaaaatgcactttag 359  Q
    |||| || |||| |||||| ||||||||||    
T  19750645 aaaagtt-aggggggaaaagtgcactttag 19750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 230 - 359
Target Start/End: Complemental strand, 19789261 - 19789133
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    |||||||| |||  |||||||||||| |||||| |||||||| |||| |||||  ||||||||||||| | |||||||| ||||||||||||||||||||    
T  19789261 ggtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagttttt 19789162  T
Q  330 aaaaattaagggaggaaaaatgcactttag 359  Q
    |||| || |||| |||||| ||||||||||    
T  19789161 aaaagtt-aggggggaaaagtgcactttag 19789133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 230 - 362
Target Start/End: Original strand, 10471358 - 10471490
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| ||||||||||||||||||||    
T  10471358 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagttttt 10471457  T
Q  330 aaaaattaagggaggaaaaatgcactttagcca 362  Q
     ||| ||||||| |||||| |||||||||||||    
T  10471458 gaaagttaaggggggaaaagtgcactttagcca 10471490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 194 - 362
Target Start/End: Complemental strand, 1834288 - 1834118
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattctt-ggggggccaaaattg 291  Q
    ||||||||||||||||||||||  |  |||||||   ||||||||||||  ||||||| ||||  |||||| ||||||| |||| |||||||||||||||    
T  1834288 taattacacacgtggcatgccaaatcagcattgatttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggggccaaaattg 1834189  T
Q  292 tagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    |||||| ||||| |||| || |||||||| |||||||| ||| |||  || |||||| |||||||||||||    
T  1834188 tagtttttatacatagggggtcaaaattgtaagttttttaaagttagagggggaaaagtgcactttagcca 1834118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 185 - 297
Target Start/End: Complemental strand, 21178172 - 21178060
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||||| ||||| |||||||||| |||||| |||||||||||| ||||||||||  ||||| ||||||| ||||||| ||||||| | || ||||| |    
T  21178172 ttaattcattaattgcacacgtggcgtgccacataggcattgaccagtcaaaattggcaaaaatgatcaaagttgcaaaagggctaaattttagggggtc 21178073  T
Q  285 aaaattgtagttt 297  Q
    |||||||||||||    
T  21178072 aaaattgtagttt 21178060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 230 - 366
Target Start/End: Complemental strand, 25685065 - 25684929
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||| ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||  || |||||||||||||||||    
T  25685065 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagagggtcaaaattgcaagttttt 25684966  T
Q  330 aaaaattaagggaggaaaaatgcactttagccatatt 366  Q
     ||| ||| ||| |||||| |||||||||||||||||    
T  25684965 gaaagttagggggggaaaagtgcactttagccatatt 25684929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 186 - 361
Target Start/End: Original strand, 13509284 - 13509459
Alignment:
Q  186 taattcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||| || ||||||| ||||||||||||  | || |||||  |||||||||||   ||||||| ||||  |||||||||||||| |||| ||||  |    
T  13509284 taattcattatttacacatgtggcatgccacacatgcgttgacttggtcaaaattggccaaaaggagcaaaggtgcaaaggggctaaatcttaggggatc 13509383  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||  |||||| || |||||||||||||| ||||||||| || |||| |||||| | ||||||||||    
T  13509384 aaaattgtagttttcatacttggggggccaaaattgcaattttttaaaagtt-aggggggaaaagtacactttagcc 13509459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 5526096 - 5526226
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||| | ||||||| ||||||||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| ||||||||||||||||||||    
T  5526096 ggtcaaaattggtcaaaaggaccaaaattgcaatggggctaaatcttaggggggctaaattgtggttttgttacttagggggccaaaattgcaagttttt 5526195  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||| || || | |||||| ||||||||||||    
T  5526196 gaaagtt-agaggggaaaagtgcactttagcc 5526226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 10470677 - 10470546
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||| ||||||| |||| |||||| |||||||| |||| ||||| | |||||||  |||   |||||||  || |||||||||||||||||    
T  10470677 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtgattttggtacttagagggtcaaaattgcaagttttt 10470578  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||| ||||||| |||||| ||||||||||||    
T  10470577 gaaagttaaggggggaaaagtgcactttagcc 10470546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 25685792 - 25685923
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| ||||||||||||||||||||    
T  25685792 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttagggggtctaaattgtggttttggtacttagggggccaaaattgcaagttttt 25685891  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||| |||  || |||||| ||||||||||||    
T  25685892 gaaagttagagggggaaaagtgcactttagcc 25685923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 46637859 - 46637804
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattg 240  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46637859 ttaattcaataattacacatgtggcatgccacgtaggcattgaccggtcaaaattg 46637804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 361
Target Start/End: Complemental strand, 48780365 - 48780248
Alignment:
Q  244 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag 343  Q
    ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| || ||||||||||||||||||||| ||| ||| |    
T  48780365 aaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttagggggg 48780266  T
Q  344 gaaaaatgcactttagcc 361  Q
    ||||| ||||||||||||    
T  48780265 gaaaagtgcactttagcc 48780248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 5525490 - 5525360
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| || |||||||||||||||||    
T  5525490 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagttttt 5525391  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||| || |||| ||||||||| |||||||||    
T  5525390 gaaagtt-aggggggaaaaatgtactttagcc 5525360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 199 - 361
Target Start/End: Original strand, 26421561 - 26421722
Alignment:
Q  199 acacacgtggcatgccacgtaggcattgaccggtc-aaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagttt 297  Q
    ||||||||||||||||||| |||| |||||   |  ||||||||  |||| ||||||| |||||| ||| |||| ||||  |||| ||||||||||||||    
T  26421561 acacacgtggcatgccacgcaggcgttgactattttaaaattgactaaaatgatcaaatttgcaatggg-ctaaatcttaaggggtcaaaattgtagttt 26421659  T
Q  298 ctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
     | ||||||||||| ||||||||||||||||| ||| || || | |||||| ||||||||||||    
T  26421660 ttgtacttaggaggtcaaaattgcaagtttttgaaagtt-agaggggaaaagtgcactttagcc 26421722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 37728535 - 37728662
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||  ||||||||||||  |||||||  ||||| ||||   ||| |||||||||||||| | ||| ||||||||||||||||||| |||||    
T  37728535 ggtcaaaattgactaaaaggatcaaagatgcaaagaagctaaatcttaaagggtcaaaattgtagtttttgtacataggaggccaaaattgcaacttttt 37728634  T
Q  330 aaaaattaagggagg-aaaaatgcacttta 358  Q
    |||| |||  ||||| ||||||||||||||    
T  37728635 aaaagtta--ggaggaaaaaatgcacttta 37728662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 190 - 358
Target Start/End: Complemental strand, 1289269 - 1289100
Alignment:
Q  190 tcaataattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaa 288  Q
    |||||||||| |||||||||||||||| || || ||||| |||||||||||||  ||||||| ||||  ||||| |||| ||| ||||  | ||| ||||    
T  1289269 tcaataattatacacgtggcatgccacttaagcgttgactcggtcaaaattgaccaaaaggaccaaagatgcaagggggttaaatcttaagaggctaaaa 1289170  T
Q  289 ttgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    ||||||||| |||||||||  |  ||||||| ||| | ||| ||| ||||||| |||||| | |||||||    
T  1289169 ttgtagtttttatacttagaggatcaaaattacaaatatttgaaagttaaggggggaaaagttcacttta 1289100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 185 - 272
Target Start/End: Complemental strand, 54108035 - 54107948
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaat 272  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| ||| |||||||   |||| || ||||  |||||||||||||||    
T  54108035 ttaattcaataattacacacgtggcgtgccatgtaggcattgactggttaaaattggccaaaaagaccaaagatgcaaaggggctaat 54107948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 279 - 361
Target Start/End: Original strand, 49308046 - 49308127
Alignment:
Q  279 ggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||| |||||||||||||| | |||||||| |||||||||||||||||||| ||| || |||| |||||| ||||||||||||    
T  49308046 gggggcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcc 49308127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 13386502 - 13386634
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||| | ||||||| |||| |||||| |||||||  |||| ||||| | ||||||| ||||   |||||| | || |||||||||||||||||    
T  13386502 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctagatcttaggggggctaaattgtggttttggtacttatggggtcaaaattgcaagttttt 13386601  T
Q  330 aaaaattaagggaggaaaaa-tgcactttagcc 361  Q
     ||| ||| ||| ||||||| ||||||||||||    
T  13386602 gaaagttagggggggaaaaagtgcactttagcc 13386634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 185 - 290
Target Start/End: Original strand, 8896835 - 8896940
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||| |||||||||||||||| ||||| ||||| |||||||||||||  |||| | |||| |||||||||||||||| ||||  ||| |    
T  8896835 ttaatttagtaattatacacgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaaag-tcaatattgcaaaggggctaaatcttaagggac 8896933  T
Q  284 caaaatt 290  Q
    |||||||    
T  8896934 caaaatt 8896940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 13386147 - 13386014
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcca-aaattgtagtttctatacttaggaggccaaaattgcaagt-tt 327  Q
    ||||||||||||| ||||||| |||| |||||| | |||||| |||| |||||  | ||||||| ||||   |||||||| |||||||||||||||| ||    
T  13386147 ggtcaaaattgatcaaaaggaccaaagttgcaatgaggctaaatcttagggggggataaattgtggttttggtacttagggggccaaaattgcaagtttt 13386048  T
Q  328 ttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    || ||| |||  || |||||| ||||||||||||    
T  13386047 ttgaaagttagagggggaaaagtgcactttagcc 13386014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 358
Target Start/End: Complemental strand, 8155914 - 8155741
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| ||| |||||||| ||||    |||||| ||||  |||| ||  |||  ||||||| |||||| |||| ||||||    
T  8155914 ttaattaattaattacacacgtggcctgctacgtaggcgttgaataagtcaaagttgaccaaaatgactaaagatgcaaagcggctaaatcttagggggc 8155815  T
Q  284 caaaattgtagtttctatacttaggag-gccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    |||||||||||||| |  ||||||| | || |||||||||||||||| ||| |||  || |||||| |||||||||    
T  8155814 caaaattgtagtttttgaacttaggggagctaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 8155741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 358
Target Start/End: Complemental strand, 33296306 - 33296227
Alignment:
Q  278 gggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    |||| |||||||| |||||| |||||||||||| ||||||||  |||||||| |||||| |||||  ||||||||||||||    
T  33296306 ggggaccaaaattatagtttttatacttaggagaccaaaattataagtttttgaaaatt-agggaaaaaaaatgcacttta 33296227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 358
Target Start/End: Original strand, 55603456 - 55603628
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| |||||||||||||||||| |||||   |||| |||| || ||||||||||| | ||||||  |  |||||||| | ||| |||||| ||||||    
T  55603456 ttaatttaataattacacacgtggcctgccatacaggcgttgatcgagtcaaaattgacataaaggactactattgcaaatgagcttattctt-gggggc 55603554  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    |||||| ||||||| | |||  ||| |   |||||||||||||||| ||| ||||||| | |||| |||||||||    
T  55603555 caaaatagtagtttttgtacacaggggattaaaattgcaagtttttgaaagttaaggg-gaaaaagtgcacttta 55603628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 44890933 - 44890878
Alignment:
Q  4 attcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaaga 62  Q
    ||||||||||||||||||||||||||||   |||| ||| |||||||||||| ||||||    
T  44890933 attcatgagtttgggtttgaatggaaga---agaaaaacatggaggagtatgtagaaga 44890878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 361
Target Start/End: Complemental strand, 50909348 - 50909273
Alignment:
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| ||||  ||||||| ||||||||||| ||||||||| ||| ||||  |||||| ||||||||||    
T  50909348 aaaattgtagtttttatatataggaggtcaaaattgcaactttttaaaacttagggga-aaaaaatacactttagcc 50909273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 281
Target Start/End: Original strand, 2193425 - 2193476
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggg 281  Q
    ||||||||||  | |||||||||||||||| |||||||||||||||| ||||    
T  2193425 ggtcaaaattagtcaaaaggatcaaaattgtaaaggggctaattcttagggg 2193476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 361
Target Start/End: Original strand, 3928856 - 3928959
Alignment:
Q  258 tgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttt 357  Q
    ||||||||||||||  | | | ||||||||||||| ||||  |||| |||| ||||||||| ||||  |||| ||| ||| ||| |||||| ||||||||    
T  3928856 tgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 3928955  T
Q  358 agcc 361  Q
    ||||    
T  3928956 agcc 3928959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 353
Target Start/End: Original strand, 46638696 - 46638817
Alignment:
Q  231 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 330  Q
    |||||||||||| |||| ||  ||| |||||||||| |||| |||| |||||| ||||||||| ||| | | | |||| |  ||||||| ||| |||||     
T  46638696 gtcaaaattgatcaaaaagactaaagttgcaaagggactaaatcttagggggctaaaattgtaatttttgttcataggggatcaaaattccaactttttg 46638795  T
Q  331 aaaattaagggaggaaaaatgca 353  Q
    ||| |||| ||||||||||||||    
T  46638796 aaagttaa-ggaggaaaaatgca 46638817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 51291421 - 51291475
Alignment:
Q  310 ggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagccata 364  Q
    |||||||||||||| ||||||||| |||||||  ||||| || ||||||||||||    
T  51291421 ggccaaaattgcaactttttaaaacttaaggggtgaaaattggactttagccata 51291475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 35
Target Start/End: Complemental strand, 43242683 - 43242654
Alignment:
Q  6 tcatgagtttgggtttgaatggaagaagaa 35  Q
    ||||||||||||||||||||||||||||||    
T  43242683 tcatgagtttgggtttgaatggaagaagaa 43242654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 20919584 - 20919632
Alignment:
Q  313 caaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||| |||| ||||||||| |||||||  ||||||||||||||||||    
T  20919584 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 20919632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 50909438 - 50909386
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaa 237  Q
    |||||| |||||||||||||||||| |||||| |||  |||||| ||||||||    
T  50909438 ttaattaaataattacacacgtggcgtgccacatagatattgactggtcaaaa 50909386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 3e-49; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 187 - 362
Target Start/End: Original strand, 39699694 - 39699868
Alignment:
Q  187 aattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaa 286  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||  |||||||| ||| |||||| |||||||| |||| |||||||||    
T  39699694 aattcaataattacacacatggcgtgccacgtaggcattgaccggtcaaaattgaccaaaaggattaaagttgcaatggggctaaatcttagggggccaa 39699793  T
Q  287 aattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||||||||||| |||||||| || |||||||||||||| || ||| || |||| |||||| |||||||||||||    
T  39699794 aattgtagtttctgtacttagggggtcaaaattgcaagttattgaaagtt-aggggggaaaagtgcactttagcca 39699868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 185 - 362
Target Start/End: Original strand, 36613828 - 36614006
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||| |||||||  ||| |||||||| |||||| |||| |||||     
T  36613828 ttaattaattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgatcaaaaggactaaagttgcaaagaggctaaatcttagggggt 36613927  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    |||||||||||||| | |||||||| |||||||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  36613928 caaaattgtagtttttgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcactttagcca 36614006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 185 - 358
Target Start/End: Original strand, 39153041 - 39153214
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| ||||  |||||||||| ||| |||| | ||| |    
T  39153041 ttaatttaataattacacacgtggcatgccacgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtc 39153140  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    ||||||||||||| | ||| || | |||||||||||||||||||| ||| ||||||| | |||| |||||||||    
T  39153141 aaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 39153214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 185 - 362
Target Start/End: Complemental strand, 45148756 - 45148580
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||||||| |||||||||||||||||| |||||||||||||||||   ||||||| ||||  |||||||||| ||| |||| ||||| |    
T  45148756 ttaatttaataattacacatgtggcatgccacgtaggctttgaccggtcaaaattggccaaaaggaccaaagatgcaaaggggttaaatcttaggggggc 45148657  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||||||||||| | |||||||| |||||||||||||||||||| ||| ||||| | | |||| |||||||||||||    
T  45148656 aaaattgtagttt-tttacttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcactttagcca 45148580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 185 - 358
Target Start/End: Original strand, 45149895 - 45150068
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattctt-ggggggc 283  Q
    |||||| |||||||||||||||||||| |||||||||| |||||||||||||||||   ||||||||||||  |||||||||||||| |||| ||||||     
T  45149895 ttaatttaataattacacacgtggcattccacgtaggctttgaccggtcaaaattggccaaaaggatcaaagatgcaaaggggctaaatcttaggggggg 45149994  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    ||||||||| |||| | |||||| | |||||||||||||||||||| ||| || |||| |||||| |||||||||    
T  45149995 caaaattgttgtttttgtacttaaggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 45150068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 197 - 361
Target Start/End: Complemental strand, 24422965 - 24422800
Alignment:
Q  197 ttacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagt 295  Q
    ||||||||||||||||||||  |||| |||||   |||||||||||  |||||||||||| |||||| |||||||| |||| ||||||||||||||||||    
T  24422965 ttacacacgtggcatgccacacaggcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagt 24422866  T
Q  296 ttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    || | |||||||| || ||||||||||||||||| ||| ||||||| | |||| ||||||||||||    
T  24422865 ttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcactttagcc 24422800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 185 - 358
Target Start/End: Complemental strand, 39152107 - 39151934
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||  ||||||| ||||  |||||||||| ||| ||||   | | |    
T  39152107 ttaatttaataattacacatgtggcatgccacgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagagtc 39152008  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    ||||||||||||| | ||| |||| |||||||||| ||||||||| ||| ||||||| | ||||||||||||||    
T  39152007 aaaattgtagtttttgtacatagggggccaaaattacaagtttttgaaacttaagggggaaaaaatgcacttta 39151934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 194 - 361
Target Start/End: Complemental strand, 11436210 - 11436042
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    |||||||||| |||||||||||| ||||| ||||| |||||||||||||  ||||| | ||||  |||||| ||| ||| |||| |||||||||||||||    
T  11436210 taattacacatgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaagaaccaaagatgcaaatgggttaaatcttagggggccaaaattgt 11436111  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||| ||||||||  ||||||||||||||||||||| ||| |||| || |||||| ||||||||||||    
T  11436110 agtttttatacttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcactttagcc 11436042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 189 - 361
Target Start/End: Complemental strand, 39698734 - 39698563
Alignment:
Q  189 ttcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaa 288  Q
    |||||||||||||||| | || ||||| ||||| |||||||||||||||||||  |||||||| ||| |||||| | |||||| |||| | || ||||||    
T  39698734 ttcaataattacacactttgcgtgccatgtaggtattgaccggtcaaaattgaccaaaaggattaaagttgcaacgaggctaaatcttagtgg-ccaaaa 39698636  T
Q  289 ttgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    || |||||||| |||||||| ||||||||||| |||||||||||| ||||||| || ||| ||||||||||||    
T  39698635 ttatagtttctgtacttagggggccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagcc 39698563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 185 - 326
Target Start/End: Original strand, 44411891 - 44412032
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| |||| ||||   |||      
T  44411891 ttaatttaataattacacacgtggcgtgccacgtaggcattgaccggtcaaaattggcaaaaaggatcaaagttgcaaagggcctaaatcttaaaggggt 44411990  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtt 326  Q
    ||||||||||||| | |||||||| | | |||||||||||||    
T  44411991 aaaattgtagtttttgtacttaggggactaaaattgcaagtt 44412032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 230 - 363
Target Start/End: Complemental strand, 51684497 - 51684364
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    |||||||||||   ||||||| ||||  |||||||||||||| |||| |||||||||||||||||||| ||||| |||| |||||||||||||| |||||    
T  51684497 ggtcaaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacatagggggccaaaattgcaacttttt 51684398  T
Q  330 aaaaattaagggaggaaaaatgcactttagccat 363  Q
    |||| ||||||| |||||| ||||||||||||||    
T  51684397 aaaagttaaggggggaaaagtgcactttagccat 51684364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 197 - 377
Target Start/End: Complemental strand, 52275133 - 52274952
Alignment:
Q  197 ttacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagt 295  Q
    |||||||| |||||||||||| |||| |||||   |||||||||||  |||||||||||| |||||| | |||||| |||| |||| |||||||||||||    
T  52275133 ttacacacttggcatgccacgcaggcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatgaggctaaatcttaggggcccaaaattgtagt 52275034  T
Q  296 ttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagccatatttgtattattat 377  Q
    || | |||||||| || ||||||||||||||||| ||| ||| ||| | |||| |||||||||||| |||| ||||||||||    
T  52275033 ttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagccttattagtattattat 52274952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 190 - 361
Target Start/End: Original strand, 11437128 - 11437300
Alignment:
Q  190 tcaataattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaa 288  Q
    |||||||||| |||||||||||||||| || || ||||| |||||||||||||  ||||||||||||  || ||| ||| ||| |||| |||||||||||    
T  11437128 tcaataattatacacgtggcatgccacttaagcgttgactcggtcaaaattgaccaaaaggatcaaagatgtaaaagggttaaatcttagggggccaaaa 11437227  T
Q  289 ttgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||| | |||||| | | |||||||||||||||||| ||| ||||||| | |||| ||||||||||||    
T  11437228 ttgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcc 11437300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 185 - 329
Target Start/End: Complemental strand, 44404618 - 44404474
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||  |||| || ||||  ||||||  |||||| | || |||||||    
T  44404618 ttaatttaataattacacacgtggcgtgccacgtaggcattgaccggtcaaaattgaccaaaatgaccaaagatgcaaattggctaaattttagggggcc 44404519  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    |||||| |||||| | |||||||| ||| |||||||| |||||||    
T  44404518 aaaattatagtttttgtacttagggggctaaaattgctagttttt 44404474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 14999457 - 14999285
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||||| || |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| | | |||||    | | ||  |    
T  14999457 ttaattcattagttacacacatggcatgccacgtaggcattgaccggtcaaaattgacaaaaaggatcaaagttgcagatgagctaa---atagaggatc 14999361  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| | |||||||| || ||||||||||||||||| ||| || |||| |||||| | ||||||||||    
T  14999360 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaagtacactttagcc 14999285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 185 - 358
Target Start/End: Complemental strand, 50680508 - 50680335
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| ||| |||||||| ||||    |||||||||||  ||||||||||||  |||||||||| ||| |||| |||| |    
T  50680508 ttaattaattaattacacacgtggcctgctacgtaggcgttgaataagtcaaaattgaccaaaaggatcaaagatgcaaaggggttaaatcttaggggac 50680409  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
     |||||| |||||| |||||||||| ||||||||||||||||||||  || ||||||| ||||||||||||||||    
T  50680408 taaaattatagtttttatacttagggggccaaaattgcaagtttttggaagttaaggg-ggaaaaatgcacttta 50680335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 14999876 - 15000056
Alignment:
Q  185 ttaattcaataattacacacgtggc----atgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttgggg 280  Q
    |||||||| ||||||||||||||||    ||||||||||||||||||| |||||||||||| ||||||||||||| ||||||| || |||| | || ||     
T  14999876 ttaattcattaattacacacgtggctggcatgccacgtaggcattgacaggtcaaaattgacaaaaaggatcaaagttgcaaatggactaaattttaggt 14999975  T
Q  281 ggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaa-tgcactttagcc 361  Q
    || ||  ||||||| || | |||||||| |  ||||||||||||||||||||| || |||||||||||| || |||||||||    
T  14999976 ggtcatgattgtagattttgtacttaggggatcaaaattgcaagtttttaaaagtt-agggaggaaaaagtgaactttagcc 15000056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 185 - 358
Target Start/End: Original strand, 37526802 - 37526975
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| | |||||||||| ||||    |||||||||||| |||| || ||||  |||||||||||||| |||| |||| |    
T  37526802 ttaattaattaattacacacgtggcctaccacgtaggcgttgaataagtcaaaattgatcaaaaagaccaaagatgcaaaggggctaaatcttagggg-c 37526900  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    ||||||||| ||||||||| |||||  ||||||||||||||||||| ||| ||||||| |||||| | |||||||    
T  37526901 caaaattgtggtttctatatttagggagccaaaattgcaagtttttgaaagttaaggggggaaaagtacacttta 37526975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 214 - 361
Target Start/End: Original strand, 45157163 - 45157309
Alignment:
Q  214 cacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggcc 313  Q
    ||||||||||||||| ||||||||||||  ||||||| ||||  |||||||||| ||| ||||   ||| |||||||||||||| | ||| |||| ||||    
T  45157163 cacgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggcc 45157262  T
Q  314 aaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||||| ||| || |||| || ||| ||||||||||||    
T  45157263 aaaattgcaagtttttgaaactt-agggggggaaagtgcactttagcc 45157309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 230 - 367
Target Start/End: Original strand, 24426045 - 24426182
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||  ||||| |||||| |||||| |||||||| |||| |||| | ||||||||||||| | |||||||| ||||||||||||||||||||    
T  24426045 ggtcaaaattgaccaaaagtatcaaatttgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagttttt 24426144  T
Q  330 aaaaattaagggaggaaaaatgcactttagccatattt 367  Q
     ||| |||  || || ||| ||||||||| || |||||    
T  24426145 gaaagttagaggggggaaagtgcactttaaccttattt 24426182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 194 - 361
Target Start/End: Complemental strand, 35594383 - 35594217
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    ||||||||||||||||||||||  || || ||||||  ||||||||||   ||||||| ||||  |||||||||||||| | || |||| | ||||||||    
T  35594383 taattacacacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttaggggtc-aaaattgt 35594285  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||  ||||||||| || ||||||||||||||||| ||| ||| ||| |||||| ||||||||||||    
T  35594284 agttttaatacttagg-ggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcc 35594217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 231 - 361
Target Start/End: Original strand, 35066973 - 35067103
Alignment:
Q  231 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 330  Q
    |||||||||||  |||||||  |  |||||||||||||||| | || |||||||||||||||||||| | | | |||| ||||||||| |||| |||||     
T  35066973 gtcaaaattgaccaaaaggactattattgcaaaggggctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaactttttg 35067072  T
Q  331 aaaattaagggaggaaaaatgcactttagcc 361  Q
    ||| ||||||| |||||| ||||||||||||    
T  35067073 aaacttaaggggggaaaagtgcactttagcc 35067103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 185 - 358
Target Start/End: Original strand, 43378637 - 43378810
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    ||||||||||| |||||||||||||||||||| || || |||||  ||||||||| ||  |||||||| |||  |||||||| ||||| |||| || ||     
T  43378637 ttaattcaatatttacacacgtggcatgccacatatgcgttgacttggtcaaaatcgaccaaaaggattaaagatgcaaaggtgctaaatcttaggtggt 43378736  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    |||||||||| ||| | |||||||| |  |||||||| |||||||| ||| ||||| || ||||| |||||||||    
T  43378737 caaaattgtaatttttgtacttaggggatcaaaattgtaagtttttgaaagttaagaga-gaaaagtgcacttta 43378810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 36613029 - 36612853
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| ||||||||| || ||||    || ||||||||  |||| || ||||  ||||||||| |||| |||| |||||     
T  36613029 ttaattaattaattacacacgtggcctgccacgtaagcgttgaataagttaaaattgaccaaaatgaccaaagatgcaaagggactaaatcttagggggt 36612930  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||||||||||||| | |||||| ||  |||||||||||| ||||| ||| ||||||| |||||||||||||||||||    
T  36612929 taaaattgtagtttttgtacttaagat-ccaaaattgcaaatttttgaaagttaaggggggaaaaatgcactttagcc 36612853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 329
Target Start/End: Original strand, 52276087 - 52276232
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||||| || |||||| |||||||||||| | | || |||||  ||||||||||||| |||||||||||| |||||| |||||||| |||| |||| |    
T  52276087 ttaattcattatttacacgcgtggcatgccatgcaagcgttgactaggtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggggac 52276186  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
     ||| || |||||| | |||||||| |||||||||| ||| |||||    
T  52276187 taaatttatagtttttgtacttagggggccaaaattacaaattttt 52276232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 230 - 362
Target Start/End: Complemental strand, 41364959 - 41364828
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||| |||| || |||| |||||| |||||||| |||| ||||| | ||||||| ||||   || ||||| ||||||||||||||||||||    
T  41364959 ggtcaaaattgatcaaaatgaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtatttagggggccaaaattgcaagttttt 41364860  T
Q  330 aaaaattaagggaggaaaaatgcactttagcca 362  Q
     ||| ||| |||| ||||| |||||||||||||    
T  41364859 gaaagttagggga-gaaaagtgcactttagcca 41364828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 198 - 361
Target Start/End: Complemental strand, 52827511 - 52827347
Alignment:
Q  198 tacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtt 296  Q
    |||||| |||||||||||  | ||| |||||  ||||||||||| | ||||||| |||| |||||| |||||||| |||| |||||   ||||||| |||    
T  52827511 tacacatgtggcatgccaaatcggcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggtt 52827412  T
Q  297 tctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |   |||||||| || ||||||||||||||||| ||| ||| ||| |||||| ||||||||||||    
T  52827411 ttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcc 52827347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 52828040 - 52828168
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   ||||||||  |||||||||||||||||||    
T  52828040 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggagccaaaattgcaagttttt 52828139  T
Q  330 aaaaattaagggaggaaaaatgcacttta 358  Q
     |||||||  || |||||| |||||||||    
T  52828140 gaaaattagagggggaaaagtgcacttta 52828168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 185 - 362
Target Start/End: Original strand, 39222397 - 39222576
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||| ||||||| |||||||||||||| ||||    ||||||||||   |||| || ||||  |||||| |||| || |||| | ||||    
T  39222397 ttaattaattaattatacacgtgtcatgccacgtaggcgttgaataagtcaaaattgcccaaaaagaccaaagatgcaaatgggcaaaatcttagagggc 39222496  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaatt-aagggaggaaaaatgcactttagcca 362  Q
     || |||||||||| |||||||||| |||||||||||||||||||| ||| || ||||| | |||| |||||||||||||    
T  39222497 taacattgtagtttttatacttagggggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgcactttagcca 39222576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 361
Target Start/End: Original strand, 35595125 - 35595294
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattg- 291  Q
    ||||||||||||||||||||||  |  ||||||||  ||||||||||||  ||||||| ||||  |||||||||||||| ||||  |||||||||||||     
T  35595125 taattacacacgtggcatgccaaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatctt-aggggccaaaattgt 35595223  T
Q  292 tagtttctatacttaggaggccaaaattgc-aagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||| ||||| |||| || ||||||||| |||||||| ||| |||  || |||||| | ||||||||||    
T  35595224 tagtttttatacatagggggtcaaaattgctaagttttttaaagttagagggggaaaagtacactttagcc 35595294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 231 - 329
Target Start/End: Complemental strand, 43058915 - 43058817
Alignment:
Q  231 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    |||||||||||  ||||||||||||  || ||||||||||| |||| | |||| ||||||||||||| | |||||||| || |||||||||||||||||    
T  43058915 gtcaaaattgaccaaaaggatcaaagatgtaaaggggctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 43058817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 427 - 555
Target Start/End: Complemental strand, 20425083 - 20424954
Alignment:
Q  427 ggatttaaaacctctttggaaacctcgacaatagaggaacccaaaccacaccaagatggtggttcttgaatatagtccaagtatgctacggga-cactcc 525  Q
    ||||||||||||||||| ||||| |||||| | || ||  | |||||||||||| || |||| ||||||||||||||||||| || ||||  | ||||||    
T  20425083 ggatttaaaacctctttagaaacatcgacattggaagattctaaaccacaccaatatagtggatcttgaatatagtccaagtctgttacgacatcactcc 20424984  T
Q  526 agggaccaacaatgtgcatatcaagaaatt 555  Q
    | |||||||| ||| |||||||| ||||||    
T  20424983 aaggaccaacgatgcgcatatcaggaaatt 20424954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 23980458 - 23980567
Alignment:
Q  252 caaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatg 351  Q
    ||||| |||||||||||||| |||| || | |||||||| |||||| | ||||||||  ||||||||||||||||||| ||| |||  || |||||| ||    
T  23980458 caaaaatgcaaaggggctaaatcttaggagaccaaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtg 23980557  T
Q  352 cactttagcc 361  Q
    ||||||||||    
T  23980558 cactttagcc 23980567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 7983180 - 7983053
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||  |||||||| ||| |||||| |||| ||| |||| ||||| ||||||||| ||||  |||| |||| ||||||||||||||||| ||    
T  7983180 ggtcaaaattgaccaaaaggatgaaatttgcaatggggataaatcttaggggggcaaaattgtggttttgatacatagggggccaaaattgcaagttgtt 7983081  T
Q  330 aaaaattaagggaggaaaaatgcacttta 358  Q
     ||| ||| |||| ||||| |||||||||    
T  7983080 gaaagttacggga-gaaaagtgcacttta 7983053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 190 - 287
Target Start/End: Original strand, 46525730 - 46525827
Alignment:
Q  190 tcaataattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaa 287  Q
    ||||||||||||||||||||||||||  || || |||||  ||||||||||||  ||||| |||| ||||||||||||||||| |||| ||||||||||    
T  46525730 tcaataattacacacgtggcatgccaaataagcgttgacttggtcaaaattgaccaaaag-atcacaattgcaaaggggctaaatcttagggggccaaa 46525827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 347
Target Start/End: Original strand, 7675457 - 7675546
Alignment:
Q  258 tgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaa 347  Q
    |||||||||||||| |||| ||||| ||||||| || ||| | ||||||||||| ||||||||||||||||| ||| |||| || |||||    
T  7675457 tgcaaaggggctaaatcttagggggtcaaaattataatttttttacttaggagggcaaaattgcaagtttttgaaagttaaaggtggaaa 7675546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 12389906 - 12390082
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccgg-tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||||| || ||||||||||||||||||||  || | ||||  || ||||||| ||| |||||||  |  |||||||||||||||| ||| |||| ||    
T  12389906 ttaattcattatttacacacgtggcatgccacacagacgttgattgggtcaaaatagatcaaaaggactattattgcaaaggggctaaatctagggg-gc 12390004  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||| || ||| | ||| |||| |  |||||| |||| ||||| ||| ||||||  |||||||||||||||||||    
T  12390005 caaaattataatttttgtacataggggatcaaaatcgcaactttttgaaagttaaggagggaaaaatgcactttagcc 12390082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 16281227 - 16281321
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggg 281  Q
    |||||||||||||||||||||  ||||| || |||||||||||| |||||||||||  ||||| || ||||  |||||||||| ||||| |||||||    
T  16281227 ttaattcaataattacacacg--gcatgtcaggtaggcattgacgggtcaaaattgggaaaaatgaccaaatatgcaaaggggttaatttttggggg 16281321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 16290270 - 16290093
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||||||||||||| |||||||| || |  |||  ||||  ||||||||||  ||||| || ||||  || ||||||| ||||||||||| ||      
T  16290270 ttaattcaataattacacatgtggcatgtcatgatggcgctgactagtcaaaattggaaaaaatgaccaaatatgtaaaggggttaattcttgggaggtt 16290171  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaatta-agggaggaaaaatgcactttagcc 361  Q
    ||||||||||||| ||||| || | | |||||||||||| ||||| ||  ||| | || | |||||||||||||||||    
T  16290170 aaaattgtagtttttatacataagggaccaaaattgcaactttttgaacgttagatggggaaaaaatgcactttagcc 16290093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 362
Target Start/End: Original strand, 50681580 - 50681706
Alignment:
Q  232 tcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaa 331  Q
    ||||||||||| || |||| ||||  ||||||| |||||| ||    ||| |||| |||||||||| |||| ||||   ||||||||||||||||||| |    
T  50681580 tcaaaattgatcaataggaccaaagatgcaaagaggctaaatc----gggaccaatattgtagtttttatagttagagagccaaaattgcaagtttttga 50681675  T
Q  332 aaattaagggaggaaaaatgcactttagcca 362  Q
    |||||||| | |||||| |||||||||||||    
T  50681676 aaattaagaggggaaaagtgcactttagcca 50681706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 361
Target Start/End: Original strand, 51685749 - 51685866
Alignment:
Q  244 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag 343  Q
    ||||||| ||||  |||||||||||||| |||| ||||| |||||||||||||| | ||| |||  ||||||||| |||| ||||| ||| |||  || |    
T  51685749 aaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaagttagagggg 51685848  T
Q  344 gaaaaatgcactttagcc 361  Q
    ||||| ||||||||||||    
T  51685849 gaaaagtgcactttagcc 51685866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 339
Target Start/End: Complemental strand, 43377897 - 43377742
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||||| || ||||||||||||||||||||  | || |||||  ||||||||||||  ||||||||||||  || |||| | |||| | || || |||    
T  43377897 ttaattcattatttacacacgtggcatgccacacatgcgttgacttggtcaaaattgaccaaaaggatcaaaggtgtaaagagactaaattttaggaggc 43377798  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaag 339  Q
    ||||||| || ||| ||||||||   | | |||||||||||| |||||||||||||    
T  43377797 caaaattataatttttatacttaaaggactaaaattgcaagtgtttaaaaattaag 43377742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 212 - 338
Target Start/End: Complemental strand, 40384874 - 40384748
Alignment:
Q  212 gccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggagg 311  Q
    ||||| ||| |||||| ||||||||||||   ||||||| ||||  ||||||| |||||| | || ||||  |||||||||||||| | ||| ||||||     
T  40384874 gccacatagacattgatcggtcaaaattggccaaaaggaccaaagatgcaaagaggctaaattttaggggatcaaaattgtagtttttgtacataggaga 40384775  T
Q  312 ccaaaattgcaagtttttaaaaattaa 338  Q
    | |||||||||| ||||| ||||||||    
T  40384774 ctaaaattgcaactttttgaaaattaa 40384748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 358
Target Start/End: Complemental strand, 45156193 - 45156052
Alignment:
Q  217 gtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaa 316  Q
    |||| ||||||| ||||||||||||  |||| || ||||  | ||||| || ||| |||| | |||  ||||||||||||| | ||| ||| ||| ||||    
T  45156193 gtagacattgactggtcaaaattgaccaaaaagaccaaagatacaaagaggttaaatcttagagggttaaaattgtagtttttgtacatagaaggtcaaa 45156094  T
Q  317 attgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    |||| |||||||| ||| |||||||||||||| || ||||||    
T  45156093 attgtaagtttttgaaacttaagggaggaaaagtgaacttta 45156052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 361
Target Start/End: Complemental strand, 21185264 - 21185208
Alignment:
Q  305 taggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||  |||| ||||||||| |||||||| ||||||||||||||||||    
T  21185264 taggaggccaaaagcgcaactttttaaaacttaagggatgaaaaatgcactttagcc 21185208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 329
Target Start/End: Complemental strand, 33088243 - 33088099
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||||||||| ||| | |||||||||| ||||||||| |||||||   |||||||  |||   ||||| ||||||| ||||  |||       
T  33088243 ttaatttaataattacacacgcggcgtaccacgtaggctttgaccggttaaaattggccaaaaggactaaagaagcaaatgggctaaatcttaagggaat 33088144  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||| |||| |||||||   |||||| |||||||||    
T  33088143 aaaattgtagtttttatatttaggagataaaaattacaagttttt 33088099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 41366101 - 41366231
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    |||||||| || | ||||||| |||| |||||| |||||||| |||| |||||| ||| |||| ||||  ||||||| | ||| ||||||||| ||||||    
T  41366101 ggtcaaaagtggtcaaaaggaccaaagttgcaatggggctaaatcttagggggctaaa-ttgtggttttgatacttaaggggctaaaattgcatgttttt 41366199  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||| ||| | | |||||| ||||||||||||    
T  41366200 gaaagttaggaggggaaaagtgcactttagcc 41366231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 292
Target Start/End: Original strand, 14512547 - 14512654
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgac-cggtcaaaattg-ataaaaaggatcaaaattgcaaaggggctaattcttgggggg 282  Q
    |||||| | ||||||||||||||||||||||| ||||| |||||  |||||||||||  |||||||  |||  |||||||||||||||| || | ||||     
T  14512547 ttaatttagtaattacacacgtggcatgccacttaggcgttgactaggtcaaaattgcctaaaaag--tcactattgcaaaggggctaaatcatagggga 14512644  T
Q  283 ccaaaattgt 292  Q
    ||||||||||    
T  14512645 ccaaaattgt 14512654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 287
Target Start/End: Complemental strand, 46524706 - 46524613
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaa 287  Q
    ||||||||||||||||||||||  || || |||||  |||||||||||   ||||| |||| ||||||||||||||||| |||| ||||||||||    
T  46524706 taattacacacgtggcatgccaaataagcgttgacttggtcaaaattggccaaaag-atcacaattgcaaaggggctaaatcttagggggccaaa 46524613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 284 - 361
Target Start/End: Complemental strand, 7674603 - 7674528
Alignment:
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||| | |||||||| | |||||||||||||||||||||| || |||| ||||||  |||||||||||    
T  7674603 caaaattgtagtttttgtacttagg-gcccaaaattgcaagtttttaaaagtt-aggggggaaaagggcactttagcc 7674528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 17505093 - 17505040
Alignment:
Q  229 cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttgggggg 282  Q
    ||||||||||||| |||||  ||||| |||||||| ||||||||||||||||||    
T  17505093 cggtcaaaattgacaaaaaatatcaatattgcaaatgggctaattcttgggggg 17505040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 252 - 329
Target Start/End: Original strand, 33088609 - 33088686
Alignment:
Q  252 caaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    |||| ||||||||||||||| |||| ||| | |||||||||||||| | ||||||   || |||||||||||||||||    
T  33088609 caaagttgcaaaggggctaaatcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaagttttt 33088686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 39221491 - 39221404
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaa 271  Q
    |||||| | |||||||||||||||| |||||||||||| ||||    |||||||||||  ||||||| ||||  ||||||||||||||    
T  39221491 ttaattaattaattacacacgtggcctgccacgtaggcgttgaattagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaa 39221404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 46312232 - 46312185
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattg 240  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||||    
T  46312232 taattacacacgtggcatgccacctaggcgttgaccaggtcaaaattg 46312185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 11190434 - 11190385
Alignment:
Q  312 ccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||| ||||||||| |||||||  ||||| ||||||||||||    
T  11190434 ccaaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagcc 11190385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 361
Target Start/End: Complemental strand, 21945763 - 21945708
Alignment:
Q  305 taggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||||||||||| ||||||||| |||| || |||||| | ||||||||||    
T  21945763 taggaggccaaaattgcaactttttaaaacttaaagg-ggaaaagtacactttagcc 21945708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 21946523 - 21946587
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaag 248  Q
    |||||| ||||||||||||||||||||| || ||| || |||| || ||||||||||| ||||||    
T  21946523 ttaatttaataattacacacgtggcatgtcatgtaagcgttgatcgagtcaaaattgaaaaaaag 21946587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 198 - 329
Target Start/End: Original strand, 43059943 - 43060075
Alignment:
Q  198 tacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtt 296  Q
    |||||| ||||| |||||||||||| ||||    |||||||||||  ||||||| ||||  |||||| | ||||| ||||  |||| |||||||||||||    
T  43059943 tacacatgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagctaaatcttaaggggtcaaaattgtagtt 43060042  T
Q  297 tctatacttaggaggccaaaattgcaagttttt 329  Q
    | | |||||| | || ||||||| ||| |||||    
T  43060043 tttgtacttaaggggtcaaaatttcaaattttt 43060075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 373
Target Start/End: Complemental strand, 46066653 - 46066513
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||| |||| ||||| |  ||||||  |||||| ||||  ||||| ||||||||||||| | ||| || | ||| ||||| |||| |||||    
T  46066653 ggtcaaaattgatcaaaaagatcagagatgcaaattggctaaatctt-aggggctaaaattgtagtttttgtacataaggggctaaaatcgcaacttttt 46066555  T
Q  330 aaaaattaagggaggaaaaatgcactttagccatatttgtatta 373  Q
     ||| |||  ||||||||| ||||||| ||||| | ||||||||    
T  46066554 gaaagtta--ggaggaaaagtgcacttaagccaaaattgtatta 46066513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 185 - 363
Target Start/End: Complemental strand, 409 - 231
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||  |||||||||||||  ||||||||||||||||||| |||| ||    
T  409 ttaattcaataattacacacgtggcatgccacataggcgttgaccggtcaaaattgggaaaaaggatcaaatatgcaaaggggctaattcttaggggacc 310  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagccat 363  Q
    |||||| |||||| | ||| |||| | |||||||||||| ||||| ||| ||||||| || ||| ||||||||||||||    
T  309 aaaattatagtttttgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcactttagccat 231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 185 - 340
Target Start/End: Original strand, 903 - 1058
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||  |||||||| ||||  |||||||||||||||||||||||||||    
T  903 ttaattcaataattacacacgtggcatgccacgtaagcgttgaccggtcaaaattgggaaaaaggaccaaatatgcaaaggggctaattcttggggggcc 1002  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagg 340  Q
    |||||| |||||| | ||| || | | |||||||||||| ||||||||| ||||||    
T  1003 aaaattatagtttttgtacataagggaccaaaattgcaactttttaaaagttaagg 1058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 2e-41; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 22629663 - 22629483
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | ||||||||||||||||| ||||||||||| ||||    |||||||||||  ||||||| ||||  |||||||||||||| |||| ||||||    
T  22629663 ttaattaattaattacacacgtggcaggccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggc 22629564  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaaggga---ggaaaaatgcactttagcc 361  Q
    |||||||||||||| | ||||||||||||||||||| ||||||||| ||||||||||||   |||||||||||||||||||    
T  22629563 caaaattgtagtttttgtacttaggaggccaaaattacaagtttttgaaaattaagggagggggaaaaatgcactttagcc 22629483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 7500631 - 7500455
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | ||||||||||| |||| |||||||||||| ||||    |||||||||||  ||||||||||||  |||||||||||||| |||| ||||||    
T  7500631 ttaattaattaattacacacatggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggatcaaagatgcaaaggggctaaatcttagggggc 7500532  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||| ||||||||||||||  |  ||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  7500531 caaaattgtggtttctatacttagaggatcaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcactttagcc 7500455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 185 - 333
Target Start/End: Original strand, 14999080 - 14999228
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| ||||||||||||  |||||||||||||| |||||||||||||||||||||   |||||| ||||  |||||||||||||| |||| ||| |||    
T  14999080 ttaatttaataattacacatatggcatgccacgtaagcattgaccggtcaaaattgacctaaaggaacaaagatgcaaaggggctaaatcttagggcgcc 14999179  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaa 333  Q
    ||||||||||||| | || ||||| || |||||||||||||||| ||||    
T  14999180 aaaattgtagtttttgtatttagggggtcaaaattgcaagttttgaaaa 14999228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 7501776 - 7501953
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| |||||||||||||||||    |||||||||||  ||||||| ||||  |||||||||||||  ||||  |||||    
T  7501776 ttaattaattaattacacacgtggcctgccacgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctacatcttaaggggc 7501875  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||| ||||  ||||||||| |||||||||||||||||||| ||| |||  || |||||| ||||||||||||    
T  7501876 caaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 7501953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 11658556 - 11658379
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| |||||||||||||||||| |||||  ||||| ||||||| ||||||||||| | ||||||  |  ||| |||||||||||||||||| ||| |    
T  11658556 ttaatttaataattacacacgtggcctgccatataggcgttgaccgagtcaaaattgacataaaggactactattacaaaggggctaattcttgagggac 11658457  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||| | ||| |||| ||| ||||||||| |||||| ||| ||||||| |||||| |||| |||||||    
T  11658456 caaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaatttagcc 11658379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 197 - 362
Target Start/End: Complemental strand, 31659788 - 31659621
Alignment:
Q  197 ttacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagt 295  Q
    ||||||||||||||||||||| | || |||||   |||||||||||  |||||||||||| |||||| |||||||| |||| ||||||||||||||||||    
T  31659788 ttacacacgtggcatgccacgcatgcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagt 31659689  T
Q  296 ttctatacttaggaggccaaaattgcaagtttttaaaaattaagggagg-aaaaatgcactttagcca 362  Q
    || | |||||||| || |||||||| |||||||| ||| ||| ||| || |||| |||||||||||||    
T  31659688 ttttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcactttagcca 31659621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 194 - 362
Target Start/End: Complemental strand, 18371592 - 18371423
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    |||||| ||||||||| |||||||||||| ||||    |||||||||||  ||||||||||||  |||||| | ||||| |||| |||||||||||||||    
T  18371592 taattatacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggatcaaagatgcaaatgtgctaaatcttagggggccaaaattgt 18371493  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||| | |||||| | |||||||||||||||||||| ||| ||| | | |||||| |||||||||||||    
T  18371492 agtttttgtacttaaggggccaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcca 18371423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 769589 - 769413
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||||||||||  | ||||||||||  ||||| ||||||||||||   ||||||||||||  |||||| ||| |||||||  ||| |||    
T  769589 ttaattaaataattacacacgtaacgtgccacgtagatattgatcggtcaaaattgggcaaaaggatcaaagatgcaaatgggttaattctaagggagcc 769490  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||| || ||| | ||||||||| | ||||||||||||||||| |||||||  || |||||| ||||||||||||    
T  769489 aaaattataatttttgtacttaggatgtcaaaattgcaagtttttgaaaattacaggtggaaaattgcactttagcc 769413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 224 - 358
Target Start/End: Original strand, 11662515 - 11662649
Alignment:
Q  224 ttgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaa 323  Q
    ||||||| |||||||||| | ||||||  |  ||||||||||||||||||||||||||||||||||| |||||| | ||| |||   || ||||||||||    
T  11662515 ttgaccgatcaaaattgacataaaggactactattgcaaaggggctaattcttggggggccaaaattatagtttttgtacatagagagctaaaattgcaa 11662614  T
Q  324 gtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    |||||| ||| ||||||| ||||||||||||||||    
T  11662615 gtttttgaaagttaaggggggaaaaatgcacttta 11662649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 185 - 337
Target Start/End: Original strand, 18372381 - 18372534
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | ||||||||||||||||| ||||| ||| | ||||    |||||||||||  ||||||| ||||  | |||||||||||| |||| ||||||    
T  18372381 ttaattaattaattacacacgtggcaggccacatagacgttgaataagtcaaaattgaccaaaaggaccaaagatacaaaggggctaaatcttagggggc 18372480  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaatta 337  Q
    |||||||||||||| | |||||||| |||||||||||||||||||| |||||||    
T  18372481 caaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaaatta 18372534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 34352711 - 34352887
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||   |||| ||| ||| ||||||   || ||| |||| | |||||    
T  34352711 ttaattcaataattacacacgtggcgtgtcacgtaggcattgaccggtcaaaattggccaaaatgattaaagttgcaataaggttaaatcttagagggcc 34352810  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||| |||||| | |||||| | | ||||||| | |||||||| |||||||  || | |||| ||||||||||||    
T  34352811 aaaattatagtttatgtacttaagggaccaaaatagaaagtttttgaaaattagaggtgaaaaagtgcactttagcc 34352887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 198 - 358
Target Start/End: Original strand, 42886224 - 42886384
Alignment:
Q  198 tacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagttt 297  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||  |||| |||||||  |||||| ||||||| |||| |||||| |||||||||||||    
T  42886224 tacacacgtggcatgccacatagacattgatcggtcaaaattgaccaaaatgatcaaagatgcaaatgggctaaatcttagggggctaaaattgtagttt 42886323  T
Q  298 ctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
     | || ||||| || ||||||||||| ||||| ||| ||| | |  ||||| |||||||||    
T  42886324 ttgtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcacttta 42886384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 31949453 - 31949322
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||| ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||   |||||||| ||||||||||||||||||||    
T  31949453 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagttttt 31949354  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||||||| ||  |||||| ||||||||||||    
T  31949353 gaaaattagggagggaaaagtgcactttagcc 31949322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 185 - 329
Target Start/End: Complemental strand, 34351664 - 34351524
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||    || ||  ||||||   |||||| ||||  ||||      
T  34351664 ttaattcaataattacacacgtggcgtgccacgtaggcattgaccggtcaaaattggtcaa----attaaggttgcaattaggctaaatcttaaggggtt 34351569  T
Q  285 aaaattgtagtttctatacttaggag-gccaaaattgcaagttttt 329  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||    
T  34351568 aaaattgtagtttctatactt-ggagagccaaaattgcaagttttt 34351524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 3227564 - 3227695
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||| ||||||| |||| |||||| |||||||| |||| ||||  | ||||||| ||||   |||||||| ||||||||||||||||||||    
T  3227564 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtacttagggggccaaaattgcaagttttt 3227663  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||| ||| ||| |||||| ||||||||||||    
T  3227664 gaaagttagggggggaaaagtgcactttagcc 3227695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 230 - 362
Target Start/End: Original strand, 47525337 - 47525469
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| |||| ||||| | ||||||| ||||  ||||||||| ||| ||||||||||||||||    
T  47525337 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttgatacttagggggctaaaattgcaagttttt 47525436  T
Q  330 aaaaattaagggaggaaaaatgcactttagcca 362  Q
     ||| |||  || |||||| |||||||||||||    
T  47525437 gaaagttagagggggaaaagtgcactttagcca 47525469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 195 - 293
Target Start/End: Complemental strand, 14998145 - 14998048
Alignment:
Q  195 aattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgta 293  Q
    ||||||||||||||||||| | |||||||||||||| | ||||||||  ||||||| ||||  |||||||||||||| |||| ||||||||||||||||    
T  14998145 aattacacacgtggcatgc-atgtaggcattgaccgattaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgta 14998048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 256 - 362
Target Start/End: Original strand, 48934899 - 48935005
Alignment:
Q  256 attgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcact 355  Q
    |||||||| |||||||||||||||||  ||||||| |||||| | |||||||  || ||||||| ||||||||| ||| ||| ||| |||||||||||||    
T  48934899 attgcaaatgggctaattcttgggggatcaaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcact 48934998  T
Q  356 ttagcca 362  Q
    |||||||    
T  48934999 ttagcca 48935005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 31949772 - 31949903
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||| ||||||| |||| |||||| |||||||| |||| ||||  | ||||||| ||||   || ||||| ||||||||||||||||||||    
T  31949772 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtatttagggggccaaaattgcaagttttt 31949871  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||| ||| ||| |||| | ||||||||||||    
T  31949872 gaaagttagggggggaagagtgcactttagcc 31949903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 360
Target Start/End: Complemental strand, 3227238 - 3227109
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||| | ||||||| |||| |||||| |||||||| ||||  |||| | ||||||| ||||   |||||||| ||||||||||||||||||||    
T  3227238 ggtcaaaattgttcaaaaggaccaaagttgcaatggggctaaatcttaagggggctaaattgtggttttggtacttagggggccaaaattgcaagttttt 3227139  T
Q  330 aaaaattaagggaggaaaaatgcactttagc 360  Q
     |||||| |||| || ||| |||||||||||    
T  3227138 gaaaatt-agggggggaaagtgcactttagc 3227109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 359
Target Start/End: Complemental strand, 17781825 - 17781663
Alignment:
Q  198 tacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtt 296  Q
    |||||| |||||||||||  | ||| |||||  ||||||||||| | ||||||| |||| |||||| |||||||| |||| |||||   ||||||| |||    
T  17781825 tacacatgtggcatgccaaatcggcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggtt 17781726  T
Q  297 tctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttag 359  Q
    |   |||||||| || ||||||||||||||||| ||| ||| ||| |||||| ||||||||||    
T  17781725 ttggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttag 17781663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 231 - 361
Target Start/End: Original strand, 22630423 - 22630553
Alignment:
Q  231 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 330  Q
    |||||||||||  ||||||| ||||  | ||||| |||| | |||| |||||| ||||||||||||| | || ||||| ||||||||||||||||||||     
T  22630423 gtcaaaattgaccaaaaggaccaaagatacaaagaggctgaatcttagggggctaaaattgtagtttttgtaattagggggccaaaattgcaagtttttg 22630522  T
Q  331 aaaattaagggaggaaaaatgcactttagcc 361  Q
    ||| ||| ||  |||||| ||||||||||||    
T  22630523 aaagttatggagggaaaagtgcactttagcc 22630553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 47369958 - 47369781
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||||||||| |||||| ||||| ||||    |||||||||||  ||||  |  |||  |||||||||||||| ||||  |||||    
T  47369958 ttaattaattaattacacacgtggcctgccacataggcgttgaataagtcaaaattgaccaaaataactaaagatgcaaaggggctaaatcttaaggggc 47369859  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||| |||||| | |||||| ||||| |||||||||||||||| ||| ||| ||||  |||| |||| |||||||    
T  47369858 caaaattatagtttttgtacttatgaggctaaaattgcaagtttttgaaagttaggggaaaaaaagtgcattttagcc 47369781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 192 - 290
Target Start/End: Original strand, 770693 - 770791
Alignment:
Q  192 aataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaatt 290  Q
    |||||||||| ||||| |   |||||||| ||||||||||||||||||||  |||| |||||||  |||||||||||||| | || |||||||||||||    
T  770693 aataattacatacgtgactgaccacgtagacattgaccggtcaaaattgaccaaaatgatcaaagatgcaaaggggctaaattttagggggccaaaatt 770791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 127466 - 127337
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||| | ||||||| |||| ||||||  ||||||| |||| ||||| | ||||||| ||||   |||||||| | ||||||||||||||||||    
T  127466 ggtcaaaattggtcaaaaggaccaaagttgcaattgggctaaatcttaggggg-ctaaattgtggttttggtacttaggggaccaaaattgcaagttttt 127368  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||| || |||| |||||| ||||||||||||    
T  127367 gaaagtt-aggggggaaaagtgcactttagcc 127337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 333
Target Start/End: Complemental strand, 6618374 - 6618235
Alignment:
Q  195 aattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgta 293  Q
    ||||||||| |||||||||||| ||||| |||||  ||||||||||||| |||| ||||||| |||||| | ||| || |||| ||| | ||||||||||    
T  6618374 aattacacatgtggcatgccacataggcgttgactaggtcaaaattgatcaaaatgatcaaatttgcaatgaggcaaaatcttagggagtcaaaattgta 6618275  T
Q  294 gtttctatacttaggaggccaaaattgcaagtttttaaaa 333  Q
     ||| |||| ||| |    |||||||||||||||| ||||    
T  6618274 atttttatatttaaggaatcaaaattgcaagttttgaaaa 6618235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 359
Target Start/End: Complemental strand, 46482774 - 46482599
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | ||||||||||| |||| |||||||||||||||||    |||||||||||  |||||||| |||| |||||||| | ||| |||| ||||      
T  46482774 ttaattaattaattacacacatggcttgccacgtaggcattgaataagtcaaaattgaccaaaaggataaaaaatgcaaaggagataaatcttaggggat 46482675  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttag 359  Q
     |||||| |||||| | ||| |||| || |||| || ||| ||||| ||||||| | |  ||||||||||||||||    
T  46482674 taaaattatagtttttgtacatagggggtcaaatttacaaatttttgaaaattaggaggagaaaaatgcactttag 46482599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 33132013 - 33131956
Alignment:
Q  4 attcatgagtttgggtttgaatggaagaagaagaagaacctggaggagtatgaagaagaag 64  Q
    |||||||||||||||||||||||||||||||   |||| || |||||||||||||||||||    
T  33132013 attcatgagtttgggtttgaatggaagaaga---agaatcttgaggagtatgaagaagaag 33131956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 128571 - 128699
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||| | |||||| ||||| |||||| |||||| | |||| ||||| | ||||||| ||||   |||||||| || ||||||||||| |||||    
T  128571 ggtcaaaattggttaaaagggtcaaagttgcaatggggctgaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaaattttt 128670  T
Q  330 aaaaattaagggaggaaaaatgcacttta 358  Q
     ||| ||| ||  |||||| |||||||||    
T  128671 gaaagttatggtgggaaaagtgcacttta 128699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 17782558 - 17782654
Alignment:
Q  265 gggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||| |||| ||||| | ||||||| ||||   |||||||| |||||||||||||||||||| ||| |||  || |||||| ||||||||||||    
T  17782558 gggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 17782654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 291
Target Start/End: Original strand, 32253352 - 32253458
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||| |||  |||| |||||||||| ||||||||||||||||||    ||||||| ||||  ||||||||| |||| |||| || || |    
T  32253352 ttaattaaataattatacagatggcgtgccacgtagacattgaccggtcaaaatttgccaaaaggaccaaagatgcaaagggactaaatcttaggtggtc 32253451  T
Q  285 aaaattg 291  Q
    |||||||    
T  32253452 aaaattg 32253458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 282 - 366
Target Start/End: Complemental strand, 43899525 - 43899443
Alignment:
Q  282 gccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagccatatt 366  Q
    |||||||||||| ||| |||| |||| ||  ||||||||||||||||| ||| ||||||||  ||||||| ||||||||| ||||    
T  43899525 gccaaaattgtaatttttatatttagaagatcaaaattgcaagtttttgaaagttaaggga--aaaaatgtactttagccctatt 43899443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 105
Target Start/End: Complemental strand, 33131921 - 33131885
Alignment:
Q  69 ttgatgagtgattttaattggatgatttgattttaaa 105  Q
    ||||||| |||||||||||||||||||||||||||||    
T  33131921 ttgatgaatgattttaattggatgatttgattttaaa 33131885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 361
Target Start/End: Complemental strand, 21505531 - 21505416
Alignment:
Q  244 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag 343  Q
    ||||||| ||||  |||||||||||||| ||||  |||| |||||||||||||| | ||  | || ||||||||| |||| ||||| ||| |||  || |    
T  21505531 aaaaggaccaaagatgcaaaggggctaaatcttatggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaaagtta--gggg 21505434  T
Q  344 gaaaaatgcactttagcc 361  Q
    ||||| ||||||||||||    
T  21505433 gaaaagtgcactttagcc 21505416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 361
Target Start/End: Original strand, 20163585 - 20163657
Alignment:
Q  289 ttgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||| | ||| ||||  ||||||||||||||||||| ||| ||| ||| ||| || ||||||||||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagcc 20163657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 185 - 361
Target Start/End: Complemental strand, 19665 - 19488
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccg-gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggc 283  Q
    |||||| | |||||||||| ||||| |||||||||||| ||||    |||||||||||  |||| |||||||  |||||||||| ||| |||| ||||      
T  19665 ttaattaattaattacacatgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaatgatcaaagatgcaaaggggttaaatcttaggggat 19566  T
Q  284 caaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  19565 caaaattgtagtttttatacttagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcactttagcc 19488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 185 - 342
Target Start/End: Complemental strand, 3851 - 3694
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||  |||| ||| ||| |||||| | |||||| |||| |||| |     
T  3851 ttaattaaataattacacacgtggcgtgccacgtaggcattgaccagtcaaaattgaccaaaaagattaaagttgcaatgcggctaaatcttaggggact 3752  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaaggga 342  Q
    |||||| |||||||| |||| ||| |||||||||||||||||||| ||| ||| ||||    
T  3751 aaaattatagtttctttactcagggggccaaaattgcaagtttttgaaagttagggga 3694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 185 - 360
Target Start/End: Original strand, 4655 - 4829
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||||  |||||||| || |||| |||||||||||||| |||||||||||| | |||||||| ||| |||||| ||||||||   || | ||| |    
T  4655 ttaattcaatcgttacacacatgacatgtcacgtaggcattgatcggtcaaaattggtcaaaaggattaaagttgcaatggggctaaaatttagagggtc 4754  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagc 360  Q
    ||||||||||||||| || ||||| ||||||||||||| |||||||||| || ||||||| ||| |||||||||||    
T  4755 aaaattgtagtttctgtatttagggggccaaaattgcatgtttttaaaagtt-agggagggaaagtgcactttagc 4829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 185 - 361
Target Start/End: Original strand, 3233 - 3408
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||||| |||| ||||| ||||||||| ||||||||||||||| || |||||||  ||||||||||||| ||||||||||||||| |||| |||| ||    
T  3233 ttaattcattaataacacatgtggcatgctacgtaggcattgaccagtaaaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggacc 3332  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    |||||| |||||| | ||| || | || |||||||| ||||||||  ||| |||||| |||||| ||||||||||||    
T  3333 aaaattatagtttttgtacctatggggtcaaaattgtaagttttt-gaaagtaaggggggaaaagtgcactttagcc 3408  T

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Target: scaffold0019 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 230 - 360
Target Start/End: Original strand, 61429 - 61559
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||  ||||||| ||||  |||||| ||||||| || | ||||||||||||| |||||| | |||||||| ||| ||||||||||||||||    
T  61429 ggtcaaaattgaccaaaaggaccaaagatgcaaaagggctaaatcatagggggccaaaattatagtttttgtacttagggggctaaaattgcaagttttt 61528  T
Q  330 aaaaattaagggaggaaaaatgcactttagc 360  Q
     |||||||||||||||||| |||||||||||    
T  61529 gaaaattaagggaggaaaagtgcactttagc 61559  T

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Target: scaffold0019; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 230 - 362
Target Start/End: Complemental strand, 60221 - 60089
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||  |||| || ||||  |||||||||||||| || | ||||| |||||||||||||| ||||| |||| || |||||||||||||||||    
T  60221 ggtcaaaattgaccaaaaagaccaaagatgcaaaggggctaaatcatagggggtcaaaattgtagtttttatacatagggggtcaaaattgcaagttttt 60122  T
Q  330 aaaaattaagggaggaaaaatgcactttagcca 362  Q
    |||| |||  ||||||||| |||||||||||||    
T  60121 aaaagttagaggaggaaaagtgcactttagcca 60089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 5408 - 5539
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    |||||||||| |  |||||||||||| ||| || |||||||| ||||  |||| |||||||||||||| | |||||| | || |||||||||||||||||    
T  5408 ggtcaaaattaaccaaaaggatcaaatttgtaatggggctaaatcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaagttttt 5507  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||||||| ||| |||||| ||||||||||||    
T  5508 gaaaattagggggggaaaagtgcactttagcc 5539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 285 - 362
Target Start/End: Original strand, 49109 - 49186
Alignment:
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||| ||||||| |||||| |||| ||||||||    
T  49109 aaaattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagttaagggtggaaaagtgcaatttagcca 49186  T

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Target: scaffold1303 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 194 - 361
Target Start/End: Complemental strand, 1607 - 1439
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgacc-ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    |||||||||| |||||||||||  |  ||||||||  ||||||||||||  ||||||| ||||  |||||| ||||||| |||| ||||| ||||||| |    
T  1607 taattacacatgtggcatgccaaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttagggggtcaaaattat 1508  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||| ||||| |||| || ||||||||||||||||| ||| |||  || |||||| | ||||||||||    
T  1507 agtttttatacatagggggtcaaaattgcaagttttttaaagttagagggggaaaagtacactttagcc 1439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 49403 - 49534
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    |||||||||||   ||||||| |||| ||||||||| ||||| |||| ||||| |||||||||||||| |||   |||| |||||||||||||| |||||    
T  49403 ggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttt 49502  T
Q  330 aaaaattaagggaggaaaaatgcactttagcc 361  Q
     ||| |||||||  ||||| ||||||||||||    
T  49503 taaagttaaggggagaaaagtgcactttagcc 49534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 39395 - 39344
Alignment:
Q  310 ggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcc 361  Q
    ||||||||||| || ||||||||| ||||||| |||||| ||||||||||||    
T  39395 ggccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcc 39344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 194 - 359
Target Start/End: Complemental strand, 18896 - 18730
Alignment:
Q  194 taattacacacgtggcatgccacgtaggcattgac-cggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgt 292  Q
    ||||||||||||||||||||||  |  || ||||| ||| |||||||| ||||||||| ||  |||| ||||||| |||||||| || || |||||||||    
T  18896 taattacacacgtggcatgccaaatcagcgttgactcggccaaaattgctaaaaaggaccactattgtaaaggggttaattcttaggaggtcaaaattgt 18797  T
Q  293 agtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttag 359  Q
    ||||| | | | ||||||| |||||| |||| ||||||||| ||||| | | |||| ||||||||||    
T  18796 agtttttgttcataggaggtcaaaatcgcaactttttaaaagttaagagggaaaaagtgcactttag 18730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 244 - 361
Target Start/End: Original strand, 7399 - 7516
Alignment:
Q  244 aaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggag 343  Q
    |||||||||||| ||||||||||||||| |||| ||||| |||||||||||||||| ||| |||| || |||||| | || ||||| ||| |||  || |    
T  7399 aaaaggatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttctgtacatagggggtcaaaatcgtaactttttcaaacttagagggg 7498  T
Q  344 gaaaaatgcactttagcc 361  Q
    || || ||||||||||||    
T  7499 gacaagtgcactttagcc 7516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 230 - 362
Target Start/End: Complemental strand, 37278 - 37147
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||  |||| ||| ||| || ||| |||||||| || | ||||||||||||||| |||| | |||||||| || ||||||||||| |||||    
T  37278 ggtcaaaattgaccaaaatgatgaaattttcaatggggctaaatcgtagggggccaaaattgttgtttttgtacttagggggtcaaaattgcaaattttt 37179  T
Q  330 aaaaattaagggaggaaaaatgcactttagcca 362  Q
     ||||   |||| |||||| |||||||||||||    
T  37178 taaaagataggg-ggaaaagtgcactttagcca 37147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 185 - 358
Target Start/End: Complemental strand, 6509 - 6346
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    |||||| |||||||||| |||||| | ||||||||| ||||||||||||||||          ||| ||||  ||||||  |||||| |||| ||||| |    
T  6509 ttaattaaataattacatacgtgggacgccacgtagacattgaccggtcaaaa----------ggaccaaagatgcaaaaaggctaaatcttagggggtc 6420  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcacttta 358  Q
    ||||||||||||| | ||| |||| ||| ||||| | || ||||| ||| ||||||| |||||| |||||||||    
T  6419 aaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtgcacttta 6346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 361
Target Start/End: Original strand, 8998 - 9126
Alignment:
Q  231 gtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttta 330  Q
    |||||||||| | ||||||||||||  ||||   ||||||| |||| |||| ||||||||||||||| | ||| |||||||| |||||  ||| |||||     
T  8998 gtcaaaattggtcaaaaggatcaaagatgcatgagggctaaatcttagggg-ccaaaattgtagtttttgtacataggaggcaaaaatcacaacttttt- 9095  T
Q  331 aaaattaagggaggaaaaa-tgcactttagcc 361  Q
     ||||||| |||||||||| ||||||||||||    
T  9096 gaaattaa-ggaggaaaaagtgcactttagcc 9126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 185 - 362
Target Start/End: Complemental strand, 23255 - 23080
Alignment:
Q  185 ttaattcaataattacacacgtggcatgccacgtaggcattgaccggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggcc 284  Q
    ||||||||| ||| | ||||||||| |  ||| ||||| |||||| |||||||||||  |||| ||| ||| |||||| ||||||||  ||| ||||  |    
T  23255 ttaattcaacaatcatacacgtggcgtatcacataggctttgaccagtcaaaattgagcaaaatgataaaatttgcaatggggctaaagcttaggggagc 23156  T
Q  285 aaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    || ||||| ||||   |||||||  || ||||||||||||||||| ||| |||  || |||||| |||||||||||||    
T  23155 aagattgttgttttggtacttagagggacaaaattgcaagtttttgaaagtta--gggggaaaagtgcactttagcca 23080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 230 - 360
Target Start/End: Original strand, 2435 - 2564
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||  |||||||| ||| |||||| |  ||||| || | |||||||||||| || |||| | |||||||| || |||||||||||||||||    
T  2435 ggtcaaaattgaccaaaaggatgaaatttgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttt 2534  T
Q  330 aaaaattaagggaggaaaaatgcactttagc 360  Q
      ||| | |||| |||||| |||||||||||    
T  2535 tgaaagttaggg-ggaaaagtgcactttagc 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 230 - 360
Target Start/End: Original strand, 7058 - 7187
Alignment:
Q  230 ggtcaaaattgataaaaaggatcaaaattgcaaaggggctaattcttggggggccaaaattgtagtttctatacttaggaggccaaaattgcaagttttt 329  Q
    ||||||||||||  |||||||| ||| |||||| |  ||||| || | |||||||||||| || |||| | |||||||| || |||||||||||||||||    
T  7058 ggtcaaaattgaccaaaaggatgaaatttgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttt 7157  T
Q  330 aaaaattaagggaggaaaaatgcactttagc 360  Q
      ||| | |||| |||||| |||||||||||    
T  7158 tgaaagttaggg-ggaaaagtgcactttagc 7187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 362
Target Start/End: Original strand, 137 - 221
Alignment:
Q  278 gggggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttaaaaattaagggaggaaaaatgcactttagcca 362  Q
    ||||||||||||||| ||||  |||| | || ||||||||| ||||  |||| ||| ||| ||| |||||| |||||||||||||    
T  137 gggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcca 221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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