View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13069_high_8 (Length: 284)
Name: NF13069_high_8
Description: NF13069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13069_high_8 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 14 - 284
Target Start/End: Complemental strand, 2489193 - 2488923
Alignment:
| Q |
14 |
aggacacacagattatatcagtacctggtagatattattcacaactaaatacaataacgacaagcactgcaaacctcagatgttactgcttgagcttcta |
113 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2489193 |
aggacacacagattatatcagtacctggtagatattattcacaactaaatacaataacgacaagcactgcaaacctcagatgttactgcttgagcttcta |
2489094 |
T |
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| Q |
114 |
acttcaatgaatctctgtcactgaattttcccgcctggaatattcccagagcatgggacaaactgtttcgaaatacaattaagtaagtatataaaagtta |
213 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2489093 |
acttcaatgaatctctgtcaccgaattttcccgcctggaatattcccagagcatgggacaaactgtttcgaaatacaattaagtaagtatataaaagtta |
2488994 |
T |
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| Q |
214 |
gattgttcatgcagcaaaatttgccggtctaacctgttgcatggaatgatcagttttccatttctgtattc |
284 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2488993 |
gattgttcatgcagcaaaatttgccggtctaacctgttgcatggaatgatcagttttccatttctgtattc |
2488923 |
T |
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